Rh4DG175200

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0001790
Physical Location & Seq
Forward (+)
34815351 .. 34819361
4011 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG175200.1

Sequence Viewer

Length: 2427 bp
ATGGCTTCAGATGAGGAAATAGATAGCTTGTTCGAAAACGCGATGAAAGGACAATGGGAAAAGGTCATGGAGGCCTACAGAAATAGTATTACAGCTCAAGTAGCCAAGATAACCAGATCCAAGGAGACTGCTCTGCACATAGCTATAGCAGATGGCCGAACCGAAATCGTCCTAGAGTTGGTGAACATTATTTTCCATACTGAAGACGACAGTGCATCAACCGTAGTACTCAGCATAGCAAATGATAGAGGCAACACGCCTCTACATCTAGCTGCTTGGCTCGGGAATGTACAAGTGTGCCACAGCATTGCAGCCAAGGCGGCAAGCCTCATCTCCGTTCGAAATGTGGAGGGCGAGACACCTCTCTTCTTGGCAGCCCTTAACGGTAACACAAAGGCTTTTCTTTGCCTAAATTTTCATTGCCAAGAAAAACCCCATTCCTCGATCAGAGACAACAATGGTGATACCATTCTTCATGCTGCAATCTCCGGTGAATACTTCAGTTTGGCATTTCAGATAATTTGGATGTACCCAGAACTTGTGAACTCTATCAATCAAAATGGTTCGTCTCCGCTGCATATTCTAGCCAGTAAGCCCAATGCATTCAAAAGCAGCTGTCGACTTGAACTCTGTGATCATCTTATATACAAATGTTTGATGGTTGAAGAACTCAAAGTGGAAGAATATAACCATGAAGCTTGTCTTTCTGAGGCAGGAGACAGAAATAGTTTTTCATACCCAGAAAACTATGAAACATGCGTGAATTTCTTCCAAGTTCTCAGAAGTTTGTTTCAAGTGTTAAGTAAAAAGAGGGGAGATAGGTGGCACGTATACTGGCATAAGACGCACAGCTCACTCCTTCAAGCTAATGGAGGAAATGTGAAGGGTACTAATGGTCCTGTTAATGATGAAGAGAATCCCAAACAAGAGGCTACTCCAGGAGCATCAACTTCTGTAGTGTGGTCACAATCAATAGATGGTACAAACGAAATATCAGATGCAAAGTGTTCAAGATCAACCAATGGGGCAAATCATCCAGAGGGAAAGGGGAGAAAGAATCACCTGTTTCCTCCCAATTATGTCTCATTTGTTCTGTTGTTCAAGTTTCTGATGAAGGCCTTGCTAATCATTCTGGGATTTGGAATTGGGGGTATAAGAAAAATCCAAGAAAAGAAAAAGAGACATATATGGGCAAATCAGGTCATGAATGAATTGGTTGATCGTACTTCTTTATACAAATATCGAAATACTGGGAAAAATCCCAAAGAAACTCAACCCAGCAAAGATAAAGAAGATTATGAAGTGCCTATTCCTACAATGCTAGAGCAAGCTTCACCCTTGCCATCTGATCATGCGGCACTTAACAGTAGAGATACAAGTACTGAGACGACTATCTTGTCCTCAAACCAGTACAATTACAAGACAGGGAGTGATAAAAACGAACAAGAGAGGAAGAACAATAAACCCTTGGTAGGTAAGAAGAATGTAGTTCCTGGAAAGAATCAGTCACCTGTTTTAATTGCAGCAAAGATGGGAGTAACTGAAATGGTGGAGAAAATCCTAGACAAATTTCCGGTGGCCATCCAGGATGTTGACTCTGATAACAAGAATGTTATACTCTTAGCAGTTGAGAACAGGCAACCCCATGTGTACAAGCTCCTTCAGAAGAGAAAGATACTAAAAGAAAGCCTGTTTTCTCAGTTGGACAACGAAGGTAATAGTGCATTACATCTTGCTGCTACATGTGGACAGTACCGGCCTTGGCTTATTCCAGGTGCGGCATTGCAAATGCAATGGGAAATCAAGTGGTATAAGTTTGTCAAAAACTCCATGCCGCATCGTTACTTTGTTCGCTACAACAACAGAGGCCAGACACCAAAGGAGATATTTAAAGATACACACAAACATCTTATAAAAGAAGGAAGCAAATGGCTAATTAAAACCTCGGAATCATGCTCCGTGGTTGCAGCCCTCATTGCAACGGTTGCATTTGCTACATCAGCAACTGTACCAGGAGGACTCGATCAGTATACAGGCGAGCCAATTCTCAAAGACAAGACAGCATTCAGTGCCTTCACCATTTCATCACTAGTTGCTCTCTGCTTCTCAATAACTTCCCTGGTCTTCTTTCTTTCAATCCTCACTTCTAGATATGAAGAAAGTGATTTTTCCATGGACTTGCCTCGCAAACTCTTGATCGGTTTGACATCACTCTTTGCATCTATAGCTTCTATGTTAGCCTCGTTTTGCACAGGTCATATCTTTCTCCTAAAACATCAACTGAGATATGTGGCATATTCATTGTATGCAGCAACTTGCTTGCCAGTTACATTTTTCGCTCTTGCACAGCTGCCGCTCTACTTTGATCTCATGAAGGCCATCATCAGAAAGGTACCTCAACGGAGCTACGAGGAGTATCCACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

808

Amino Acids

90.67

Weight (kDa)

8.58

Isoelectric Point (pI)

36.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 40 - 106 1.6e-07 Ankyrin repeats (3 copies)
PGG PF13962 643 - 754 3e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1913
AasI GACNNNNNNGTC 1 cut(s) 1396
Acc65I GGTACC 1 cut(s) 2392
AccB1I GGYRCC 1 cut(s) 2392
AccBSI CCGCTC 1 cut(s) 2356
AccI GTMKAC 3 cut(s) 619, 831, 2030
AccII CGCG 1 cut(s) 41
AciI CCGC 6 cut(s) 320, 572, 1355, 1778, 1835, 2354
AclWI GGATC 1 cut(s) 111
AcoI YGGCCR 2 cut(s) 154, 1578
AcsI RAATTY 3 cut(s) 412, 763, 1568
AcuI CTGAAG 3 cut(s) 222, 484, 1646
AfiI CCNNNNNNNGG 2 cut(s) 178, 1472
AflIII ACRYGT 1 cut(s) 1742
AgsI TTSAA 8 cut(s) 607, 626, 665, 794, 863, 1011, 1102, 2136
AhlI ACTAGT 1 cut(s) 2089
AjnI CCWGG 6 cut(s) 937, 1492, 1584, 1771, 2011, 2118
Alw26I GTCTC 8 cut(s) 119, 350, 444, 573, 711, 1087, 1174, 1379
AlwI GGATC 1 cut(s) 111
AlwNI CAGNNNCTG 1 cut(s) 2006
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 7 cut(s) 72, 154, 1116, 1578, 1757, 1867, 2376
ApoI RAATTY 3 cut(s) 412, 763, 1568
Asp700I GAANNNNTTC 1 cut(s) 767
Asp718I GGTACC 1 cut(s) 2392
AspS9I GGNCC 1 cut(s) 896
AsuHPI GGTGA 7 cut(s) 193, 473, 503, 1052, 1326, 1500, 2068
AsuII TTCGAA 2 cut(s) 33, 340
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 1 cut(s) 896
BalI TGGCCA 1 cut(s) 1580
BanI GGYRCC 1 cut(s) 2392
BbsI GAAGAC 2 cut(s) 210, 2116
BccI CCATC 7 cut(s) 146, 652, 971, 1351, 1525, 1589, 2387
BciT130I CCWGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
BciVI GTATCC 1 cut(s) 2427
BclI TGATCA 2 cut(s) 634, 1348
BcoDI GTCTC 8 cut(s) 119, 350, 444, 573, 711, 1087, 1174, 1379
BcuI ACTAGT 1 cut(s) 2089
BfaI CTAG 7 cut(s) 173, 269, 584, 1322, 1562, 2090, 2148
BfmI CTRYAG 4 cut(s) 76, 144, 954, 2223
BfuI GTATCC 1 cut(s) 2427
BglI GCCNNNNNGGC 1 cut(s) 320
BmcAI AGTACT 2 cut(s) 228, 1381
Bme1390I CCNGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
Bme18I GGWCC 1 cut(s) 896
BmeT110I CYCGRG 1 cut(s) 281
BmgT120I GGNCC 1 cut(s) 896
BmiI GGNNCC 1 cut(s) 2394
BmrFI CCNGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
BmrI ACTGGG 1 cut(s) 1260
BmsI GCATC 5 cut(s) 224, 953, 988, 1846, 2228
BmuI ACTGGG 1 cut(s) 1260
BpiI GAAGAC 2 cut(s) 210, 2116
BpmI CTGGAG 1 cut(s) 921
Bpu14I TTCGAA 2 cut(s) 33, 340
BpuEI CTTGAG 1 cut(s) 81
BsaAI YACGTR 1 cut(s) 829
BsaJI CCNNGG 8 cut(s) 120, 315, 1467, 1760, 1944, 1959, 2118, 2172
BsaWI WCCGGW 2 cut(s) 488, 1573
BsaXI ACNNNNNCTCC 2 cut(s) 864, 894
Bsc4I CCNNNNNNNGG 2 cut(s) 178, 1472
Bse118I RCCGGY 1 cut(s) 1755
Bse1I ACTGG 5 cut(s) 588, 839, 1255, 1408, 2324
Bse3DI GCAATG 5 cut(s) 306, 418, 1781, 1799, 1974
BseBI CCWGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
BseDI CCNNGG 8 cut(s) 120, 315, 1467, 1760, 1944, 1959, 2118, 2172
BseGI GGATG 4 cut(s) 531, 1033, 1581, 1594
BseLI CCNNNNNNNGG 2 cut(s) 178, 1472
BseMI GCAATG 5 cut(s) 306, 418, 1781, 1799, 1974
BseMII CTCAG 6 cut(s) 244, 699, 793, 1374, 1712, 2273
BseNI ACTGG 5 cut(s) 588, 839, 1255, 1408, 2324
BseRI GAGGAG 1 cut(s) 2426
BseYI CCCAGC 1 cut(s) 1277
BsgI GTGCAG 1 cut(s) 119
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 7 cut(s) 74, 156, 1118, 1580, 1759, 1869, 2378
BshNI GGYRCC 1 cut(s) 2392
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 3 cut(s) 489, 1574, 1756
BslI CCNNNNNNNGG 2 cut(s) 178, 1472
BsmAI GTCTC 8 cut(s) 119, 350, 444, 573, 711, 1087, 1174, 1379
BsmBI CGTCTC 2 cut(s) 573, 1379
BsmI GAATGC 2 cut(s) 602, 2063
BsnI GGCC 7 cut(s) 74, 156, 1118, 1580, 1759, 1869, 2378
BsoBI CYCGRG 1 cut(s) 281
Bsp119I TTCGAA 2 cut(s) 33, 340
Bsp1407I TGTACA 2 cut(s) 289, 1650
Bsp143I GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
Bsp19I CCATGG 1 cut(s) 2172
BspACI CCGC 6 cut(s) 320, 572, 1355, 1778, 1835, 2354
BspANI GGCC 7 cut(s) 74, 156, 1118, 1580, 1759, 1869, 2378
BspCNI CTCAG 6 cut(s) 243, 700, 792, 1375, 1711, 2274
BspFNI CGCG 1 cut(s) 41
BspHI TCATGA 2 cut(s) 1203, 2370
BspLI GGNNCC 1 cut(s) 2394
BspPI GGATC 1 cut(s) 111
BspT104I TTCGAA 2 cut(s) 33, 340
BspT107I GGYRCC 1 cut(s) 2392
BsrBI CCGCTC 1 cut(s) 2356
BsrDI GCAATG 5 cut(s) 306, 418, 1781, 1799, 1974
BsrFI RCCGGY 1 cut(s) 1755
BsrGI TGTACA 2 cut(s) 289, 1650
BsrI ACTGG 5 cut(s) 588, 839, 1255, 1408, 2324
BssAI RCCGGY 1 cut(s) 1755
BssECI CCNNGG 8 cut(s) 120, 315, 1467, 1760, 1944, 1959, 2118, 2172
BssMI GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
BssNAI GTATAC 2 cut(s) 832, 2031
BssT1I CCWWGG 5 cut(s) 120, 315, 1467, 1760, 2172
Bst1107I GTATAC 2 cut(s) 832, 2031
Bst2UI CCWGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
Bst4CI ACNGT 7 cut(s) 212, 223, 386, 1367, 1752, 1984, 2008
Bst6I CTCTTC 3 cut(s) 371, 906, 1661
BstAPI GCANNNNNTGC 2 cut(s) 1985, 2069
BstAUI TGTACA 2 cut(s) 289, 1650
BstBAI YACGTR 1 cut(s) 829
BstBI TTCGAA 2 cut(s) 33, 340
BstC8I GCNNGC 4 cut(s) 325, 1329, 2039, 2321
BstDEI CTNAG 7 cut(s) 230, 708, 779, 1383, 1621, 1698, 2282
BstDSI CCRYGG 2 cut(s) 1959, 2172
BstF5I GGATG 4 cut(s) 531, 1033, 1581, 1594
BstFNI CGCG 1 cut(s) 41
BstKTI GATC 9 cut(s) 119, 447, 637, 1016, 1222, 1351, 2026, 2199, 2368
BstMAI GTCTC 8 cut(s) 119, 350, 444, 573, 711, 1087, 1174, 1379
BstMBI GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
BstMWI GCNNNNNNNGC 9 cut(s) 101, 317, 320, 844, 1976, 1985, 2000, 2069, 2225
BstNI CCWGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
BstNSI RCATGY 2 cut(s) 759, 1746
BstSCI CCNGG 6 cut(s) 937, 1492, 1584, 1771, 2011, 2118
BstSFI CTRYAG 4 cut(s) 76, 144, 954, 2223
BstUI CGCG 1 cut(s) 41
BstV2I GAAGAC 2 cut(s) 210, 2116
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BstZ17I GTATAC 2 cut(s) 832, 2031
BsuI GTATCC 1 cut(s) 2427
BsuRI GGCC 7 cut(s) 74, 156, 1118, 1580, 1759, 1869, 2378
BtgI CCRYGG 2 cut(s) 1959, 2172
BtgZI GCGATG 1 cut(s) 56
BtsCI GGATG 4 cut(s) 531, 1033, 1581, 1594
BtsIMutI CAGTG 2 cut(s) 217, 2074
Cac8I GCNNGC 4 cut(s) 325, 1329, 2039, 2321
CaiI CAGNNNCTG 1 cut(s) 2006
CciI TCATGA 2 cut(s) 1203, 2370
Cfr10I RCCGGY 1 cut(s) 1755
Cfr13I GGNCC 1 cut(s) 896
CseI GACGC 1 cut(s) 853
DdeI CTNAG 7 cut(s) 230, 708, 779, 1383, 1621, 1698, 2282
DpnI GATC 9 cut(s) 118, 446, 636, 1015, 1221, 1350, 2025, 2198, 2367
DpnII GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
DraI TTTAAA 1 cut(s) 1891
DrdI GACNNNNNNGTC 1 cut(s) 1396
DseDI GACNNNNNNGTC 1 cut(s) 1396
EaeI YGGCCR 2 cut(s) 154, 1578
Eam1104I CTCTTC 3 cut(s) 371, 906, 1661
EarI CTCTTC 3 cut(s) 371, 906, 1661
Eco130I CCWWGG 5 cut(s) 120, 315, 1467, 1760, 2172
Eco147I AGGCCT 2 cut(s) 74, 1118
Eco47I GGWCC 1 cut(s) 896
Eco57I CTGAAG 3 cut(s) 222, 484, 1646
Eco88I CYCGRG 1 cut(s) 281
EcoRII CCWGG 6 cut(s) 937, 1492, 1584, 1771, 2011, 2118
EcoT14I CCWWGG 5 cut(s) 120, 315, 1467, 1760, 2172
EcoT22I ATGCAT 1 cut(s) 604
ErhI CCWWGG 5 cut(s) 120, 315, 1467, 1760, 2172
Esp3I CGTCTC 2 cut(s) 573, 1379
FalI AAGNNNNNCTT 2 cut(s) 687, 719
FbaI TGATCA 2 cut(s) 634, 1348
FblI GTMKAC 3 cut(s) 619, 831, 2030
FokI GGATG 4 cut(s) 538, 1020, 1568, 1601
FspBI CTAG 7 cut(s) 173, 269, 584, 1322, 1562, 2090, 2148
GsaI CCCAGC 1 cut(s) 1281
GsuI CTGGAG 1 cut(s) 921
HaeIII GGCC 7 cut(s) 74, 156, 1118, 1580, 1759, 1869, 2378
HapII CCGG 3 cut(s) 489, 1574, 1756
HgaI GACGC 1 cut(s) 853
HincII GTYRAC 2 cut(s) 620, 1594
HindII GTYRAC 2 cut(s) 620, 1594
HindIII AAGCTT 2 cut(s) 696, 1329
HinfI GANTC 6 cut(s) 916, 1057, 1501, 1595, 1949, 2019
HpaII CCGG 3 cut(s) 489, 1574, 1756
HphI GGTGA 7 cut(s) 193, 473, 503, 1052, 1326, 1500, 2068
Hpy166II GTNNAC 8 cut(s) 184, 544, 620, 832, 1594, 1651, 1748, 2031
Hpy188III TCNNGA 7 cut(s) 283, 1011, 1037, 1204, 2148, 2194, 2371
Hpy8I GTNNAC 8 cut(s) 184, 544, 620, 832, 1594, 1651, 1748, 2031
HpyAV CCTTC 8 cut(s) 869, 877, 1108, 1670, 1706, 1913, 2083, 2368
HpyCH4III ACNGT 7 cut(s) 212, 223, 386, 1367, 1752, 1984, 2008
HpyCH4IV ACGT 1 cut(s) 828
HpyF10VI GCNNNNNNNGC 9 cut(s) 101, 317, 320, 844, 1976, 1985, 2000, 2069, 2225
HpyF3I CTNAG 7 cut(s) 230, 708, 779, 1383, 1621, 1698, 2282
HpySE526I ACGT 1 cut(s) 828
KpnI GGTACC 1 cut(s) 2396
Ksp22I TGATCA 2 cut(s) 634, 1348
Kzo9I GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
LmnI GCTCC 4 cut(s) 941, 1662, 1961, 2403
LweI GCATC 5 cut(s) 224, 953, 988, 1846, 2228
MaeI CTAG 7 cut(s) 173, 269, 584, 1322, 1562, 2090, 2148
MaeII ACGT 1 cut(s) 828
MaeIII GTNAC 6 cut(s) 386, 963, 1506, 1537, 1841, 2326
MalI GATC 9 cut(s) 118, 446, 636, 1015, 1221, 1350, 2025, 2198, 2367
MbiI CCGCTC 1 cut(s) 2356
MboI GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
MflI RGATCY 1 cut(s) 116
MlsI TGGCCA 1 cut(s) 1580
MluNI TGGCCA 1 cut(s) 1580
MlyI GAGTC 2 cut(s) 1589, 2013
MmeI TCCRAC 1 cut(s) 1683
Mox20I TGGCCA 1 cut(s) 1580
Mph1103I ATGCAT 1 cut(s) 604
MroXI GAANNNNTTC 1 cut(s) 767
MscI TGGCCA 1 cut(s) 1580
MseI TTAA 7 cut(s) 381, 800, 903, 1362, 1517, 1890, 1938
Msp20I TGGCCA 1 cut(s) 1580
MspA1I CMGCKG 3 cut(s) 574, 615, 2350
MspI CCGG 3 cut(s) 489, 1574, 1756
MspR9I CCNGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
Mva1269I GAATGC 2 cut(s) 602, 2063
MvaI CCWGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 9 cut(s) 101, 317, 320, 844, 1976, 1985, 2000, 2069, 2225
NcoI CCATGG 1 cut(s) 2172
NdeII GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
NlaIV GGNNCC 1 cut(s) 2394
NmuCI GTSAC 2 cut(s) 963, 1506
NsiI ATGCAT 1 cut(s) 604
NspI RCATGY 2 cut(s) 759, 1746
NspV TTCGAA 2 cut(s) 33, 340
PagI TCATGA 2 cut(s) 1203, 2370
PceI AGGCCT 2 cut(s) 74, 1118
PciI ACATGT 1 cut(s) 1742
PctI GAATGC 2 cut(s) 602, 2063
PdmI GAANNNNTTC 1 cut(s) 767
PfeI GAWTC 4 cut(s) 916, 1057, 1501, 1949
PfoI TCCNGGA 3 cut(s) 937, 1492, 1584
PleI GAGTC 2 cut(s) 1589, 2013
PpsI GAGTC 2 cut(s) 1589, 2013
Ppu21I YACGTR 1 cut(s) 829
PscI ACATGT 1 cut(s) 1742
PsiI TTATAA 1 cut(s) 1913
Psp6I CCWGG 6 cut(s) 937, 1492, 1584, 1771, 2011, 2118
PspFI CCCAGC 1 cut(s) 1277
PspGI CCWGG 6 cut(s) 937, 1492, 1584, 1771, 2011, 2118
PspN4I GGNNCC 1 cut(s) 2394
PspPI GGNCC 1 cut(s) 896
PstNI CAGNNNCTG 1 cut(s) 2006
PsuI RGATCY 1 cut(s) 116
PvuII CAGCTG 2 cut(s) 615, 2350
SalI GTCGAC 1 cut(s) 618
SaqAI TTAA 7 cut(s) 381, 800, 903, 1362, 1517, 1890, 1938
Sau3AI GATC 9 cut(s) 116, 444, 634, 1013, 1219, 1348, 2023, 2196, 2365
Sau96I GGNCC 1 cut(s) 896
ScaI AGTACT 2 cut(s) 228, 1381
SchI GAGTC 2 cut(s) 1589, 2013
ScrFI CCNGG 6 cut(s) 939, 1494, 1586, 1773, 2013, 2120
SfaNI GCATC 5 cut(s) 224, 953, 988, 1846, 2228
SfcI CTRYAG 4 cut(s) 76, 144, 954, 2223
SfuI TTCGAA 2 cut(s) 33, 340
SinI GGWCC 1 cut(s) 896
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SpeI ACTAGT 1 cut(s) 2089
SseBI AGGCCT 2 cut(s) 74, 1118
SsiI CCGC 6 cut(s) 320, 572, 1355, 1778, 1835, 2354
SspMI CTAG 7 cut(s) 173, 269, 584, 1322, 1562, 2090, 2148
StuI AGGCCT 2 cut(s) 74, 1118
StyD4I CCNGG 6 cut(s) 937, 1492, 1584, 1771, 2011, 2118
StyI CCWWGG 5 cut(s) 120, 315, 1467, 1760, 2172
TaaI ACNGT 7 cut(s) 212, 223, 386, 1367, 1752, 1984, 2008
TaiI ACGT 1 cut(s) 831
TaqI TCGA 6 cut(s) 33, 340, 443, 619, 1243, 2022
TatI WGTACW 5 cut(s) 226, 289, 1379, 1410, 1650
TauI GCSGC 5 cut(s) 323, 1358, 1781, 1837, 2356
TfiI GAWTC 4 cut(s) 916, 1057, 1501, 1949
Tru1I TTAA 7 cut(s) 381, 800, 903, 1362, 1517, 1890, 1938
Tru9I TTAA 7 cut(s) 381, 800, 903, 1362, 1517, 1890, 1938
TscAI CASTG 2 cut(s) 217, 2074
TseFI GTSAC 2 cut(s) 963, 1506
Tsp45I GTSAC 2 cut(s) 963, 1506
TspGWI ACGGA 3 cut(s) 325, 1948, 2416
TspRI CASTG 2 cut(s) 217, 2074
VpaK11BI GGWCC 1 cut(s) 896
XapI RAATTY 3 cut(s) 412, 763, 1568
XbaI TCTAGA 1 cut(s) 2147
XceI RCATGY 2 cut(s) 759, 1746
XmiI GTMKAC 3 cut(s) 619, 831, 2030
XmnI GAANNNNTTC 1 cut(s) 767
XspI CTAG 7 cut(s) 173, 269, 584, 1322, 1562, 2090, 2148
ZrmI AGTACT 2 cut(s) 228, 1381
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.