Rroxscaffold_5G00358090

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0001790
Physical Location & Seq
Reverse (-)
38070508 .. 38074959
4452 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00358090.1

Sequence Viewer

Length: 2325 bp
ATGGCTTCAGATGAGGAAATAGATAGCTTGTTCGAATACGCAATGAAAGGACAATGGGAAAAGGTCATGGAGGCCTACAAAAAAAGTATTACTGCTCAAGAAGCCAAGATAACCAGATCCAAGGAGACTGCTCTGCACATAGCTATAGCAGATGGCCGAACCGAAATCGCACTAGACTTGGTGAACATTATTCTCAAAACTAGAGACGACGATGCAACAACCGCAGTACTCAGCATAGCAAATGATAGAGGCAACACGCCACTACATCTAGCTGCTTGGCTCGGGAATGTACAAGTGTGCCACAGCATTGCGGCCAAGGCGGGGAGCCTCGTCTCCGTTCGAAATGTGGAGGGTGAGACACCTCTCTTCTTGGCAGCTCTTAATGGTAACACAAAGGCTTTTCTTTGCCTTCATCTCCTTTGCCAAGAAAAACCCCATTCCTCGATCAGAGACAACAATGGTGATACCATTCTTCATGCTGCAATCTCCGGTGAATACTTCAGTTTGGCATTTCAGATAATTCGGTTGTACCCGGAACTTGTGAACTCTATCAATCAAAATGGTTCGTCTCCGCTGCATATTCTAGCTAGTAAGCCCAATGCATTCAAAAGCAGCTGTCGACTTGGACTCTGTGATCTTCTTATATACAAATGTTTGATGGTTGAAGAACTCGAAGTGGAAGAATATAACCATGAAGCGTGTCTTTCTAAGGCAGGAGACGGAGACAGTTCTTCATACCCAGAAAACTACGAAACATGCATGAACTTCTTCCAAGTTCTCAGAAGTTTGTTTCAAGTGTTAAAGGGAGATAGCAACTGTATGCAAGTGTGGCACAAATACTGGCATAAGACGCACTGCTCCCTCTTTCAAGCTAATGGAGGAAATGGAAAGCGTACTAATGGTCCTGCCGACGACGAAGAGAATCCTCAAAAAGAGGCTACTCCAGGAGCATCAACTTCTGCAGTCATGAGGTCACAACCAAGACATGCTACAAAAGAAATATCAAATGCAAAGAGTTCAAGATCAACCAATGGAATTTGGGGGATACGAAAAATCCAAGAAAAGAAAGAGAGACATATATGGGCAAATCAGGTCCTGAATGAATTGGTTGACTGTACTTCTTTATACAAATATCGAAATACTGGGAAAAATCCCCAAGAAACTCAACCCAGCTGCAACGATAAAGAAGAATGTGAAGTGCCTAATCCTACAATGCTACAGCAAGCTTCCTTATTATCTGATCATGCGGCACTTAACAGTAGAGATACAAGTATTGAGACGACTATCTTGTCCTCAAACCAGAACAATTATACGATAGGGAGTGATCAGAATGAACAAGAGAGAAAGAACATTAGTGCCTTGGGAGGTAAGAAGAATGGAGTTCTTGTAGCAGGGAAAAATCAGTCACCTGTTTTAATTGCAGCAAAGATGGGAGTAACTGAAATGGTGGAGAAAATCCTAGACAAATTTCCAGTGGCCATCCAGGATGTTGACTATGATAACAAGAATGTTATACTCTTAGCAGTTGAGAACAGGCAACCCCATGTTTACAATCTTCTTCAGAAGAGAAAGATACTAAAAGAAAGCCTGTTGCGTCAGTTGGACAACGAAGGTAACAGTGCATTACATCTTGCTGCTACATGTGGACGGTACCGACCTTGGCTTATTCCAGGCGCGGCATTGCAAATGCAATGGGAAATCAAGTGGTATAAGTTTGTCAAAAACTCCATGCCGCATCGTTACTTTGTTCGCTACAACAAAAGAGGCCAGACACCAAAGGAGATATTCATAGATACACACAAACATCTTATAAAAGAAGGAAGCAAATGGCTAACCAAAACCTCGGAATCATGCTCTGTGGTTGCAGCCCTCATTGCAACGGTTGCATTTGCTACTTCAGCAACTGTACCAGGAGGACTAAATCAGCATACAGGCGAGCCAATTCTCAAAGACAAGACAGCATTCAGTGCCTTCACCATTTCATCACTAGTTGCTCTCTGCTTCTCAATAACTTCCCTGGTCTTCTTTCTTTCAATCCTCACTTCTCGATACGAAGAAAGTGATTTTTCCATGGACTTGCCCCGAAAACTCTTAATGGGTTTGACATCACTGTTTGCATCCATAGCTTCCATGTTAGTCTCGTTCTGCACAGGGCATATCTTTCTCCTAAATCATCAACTGAGATATGTGGCATATCCACTGTATGCAGCAACTTGCTTGCCAGTTACGTTTTTCGCTCTTGCACAGCTGCCACTCTACTTTGATCTCATGAGGGCCATCATCAAAAAGGTACCTCAACGGAGCTACGAGGTCTATCCACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

774

Amino Acids

86.45

Weight (kDa)

8.14

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 36 - 105 1.9e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 112 - 164 3.3e-06 Ankyrin repeats (3 copies)
PGG PF13962 609 - 720 2.6e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1811
AasI GACNNNNNNGTC 1 cut(s) 1288
Acc65I GGTACC 2 cut(s) 1650, 2290
AccB1I GGYRCC 2 cut(s) 1650, 2290
AccI GTMKAC 1 cut(s) 619
AccII CGCG 1 cut(s) 1676
AciI CCGC 7 cut(s) 222, 311, 320, 572, 1247, 1676, 1733
AclWI GGATC 1 cut(s) 111
AcoI YGGCCR 3 cut(s) 154, 312, 1476
AcsI RAATTY 2 cut(s) 1035, 1466
AcuI CTGAAG 3 cut(s) 484, 1544, 1881
AfaI GTAC 8 cut(s) 228, 291, 530, 895, 1117, 1652, 1908, 2292
AfiI CCNNNNNNNGG 1 cut(s) 321
AflIII ACRYGT 1 cut(s) 1640
AgsI TTSAA 6 cut(s) 607, 665, 794, 869, 1020, 2034
AhlI ACTAGT 1 cut(s) 1987
AjnI CCWGG 5 cut(s) 943, 1482, 1669, 1909, 2016
AlwI GGATC 1 cut(s) 111
AlwNI CAGNNNCTG 2 cut(s) 1096, 1904
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 6 cut(s) 72, 154, 312, 1476, 1765, 2274
ApoI RAATTY 2 cut(s) 1035, 1466
Asp700I GAANNNNTTC 1 cut(s) 767
Asp718I GGTACC 2 cut(s) 1650, 2290
AspLEI GCGC 1 cut(s) 1676
AspS9I GGNCC 3 cut(s) 902, 1093, 2274
AsuC2I CCSGG 1 cut(s) 533
AsuHPI GGTGA 6 cut(s) 193, 365, 473, 503, 1398, 1966
AsuII TTCGAA 2 cut(s) 33, 340
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 2 cut(s) 902, 1093
BalI TGGCCA 1 cut(s) 1478
BanI GGYRCC 2 cut(s) 1650, 2290
BbsI GAAGAC 1 cut(s) 2014
BccI CCATC 5 cut(s) 146, 652, 1423, 1487, 2285
BciT130I CCWGG 5 cut(s) 945, 1484, 1671, 1911, 2018
BciVI GTATCC 1 cut(s) 1038
BclI TGATCA 2 cut(s) 1240, 1324
BcnI CCSGG 1 cut(s) 533
BcuI ACTAGT 1 cut(s) 1987
BfaI CTAG 8 cut(s) 173, 201, 269, 584, 588, 1460, 1988, 2323
BfmI CTRYAG 3 cut(s) 144, 960, 1217
BfuI GTATCC 1 cut(s) 1038
BmcAI AGTACT 1 cut(s) 228
Bme1390I CCNGG 6 cut(s) 533, 945, 1484, 1671, 1911, 2018
Bme18I GGWCC 2 cut(s) 902, 1093
BmeT110I CYCGRG 1 cut(s) 281
BmgT120I GGNCC 3 cut(s) 902, 1093, 2274
BmiI GGNNCC 3 cut(s) 326, 1652, 2292
BmrFI CCNGG 6 cut(s) 533, 945, 1484, 1671, 1911, 2018
BmrI ACTGGG 1 cut(s) 1152
BmsI GCATC 4 cut(s) 202, 959, 1744, 2126
BmuI ACTGGG 1 cut(s) 1152
BpiI GAAGAC 1 cut(s) 2014
BpmI CTGGAG 1 cut(s) 927
Bpu14I TTCGAA 2 cut(s) 33, 340
BpuEI CTTGAG 1 cut(s) 81
BpuMI CCSGG 1 cut(s) 533
BsaJI CCNNGG 7 cut(s) 120, 315, 1359, 1658, 1842, 2016, 2070
BsaWI WCCGGW 1 cut(s) 488
BsaXI ACNNNNNCTCC 2 cut(s) 1371, 1401
Bsc4I CCNNNNNNNGG 1 cut(s) 321
Bse1I ACTGG 4 cut(s) 845, 1147, 1472, 2222
Bse3DI GCAATG 5 cut(s) 48, 306, 1679, 1697, 1872
BseBI CCWGG 5 cut(s) 945, 1484, 1671, 1911, 2018
BseDI CCNNGG 7 cut(s) 120, 315, 1359, 1658, 1842, 2016, 2070
BseGI GGATG 3 cut(s) 1479, 1492, 2117
BseLI CCNNNNNNNGG 1 cut(s) 321
BseMI GCAATG 5 cut(s) 48, 306, 1679, 1697, 1872
BseMII CTCAG 3 cut(s) 244, 793, 2171
BseNI ACTGG 4 cut(s) 845, 1147, 1472, 2222
BseYI CCCAGC 1 cut(s) 1169
BsgI GTGCAG 2 cut(s) 119, 2131
Bsh1236I CGCG 1 cut(s) 1676
BshFI GGCC 6 cut(s) 74, 156, 314, 1478, 1767, 2276
BshNI GGYRCC 2 cut(s) 1650, 2290
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 2 cut(s) 489, 533
BslI CCNNNNNNNGG 1 cut(s) 321
BsmBI CGTCTC 5 cut(s) 198, 337, 573, 711, 1271
BsmI GAATGC 2 cut(s) 602, 1961
BsnI GGCC 6 cut(s) 74, 156, 314, 1478, 1767, 2276
BsoBI CYCGRG 1 cut(s) 281
Bsp119I TTCGAA 2 cut(s) 33, 340
Bsp1407I TGTACA 1 cut(s) 289
Bsp143I GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
Bsp19I CCATGG 1 cut(s) 2070
BspACI CCGC 7 cut(s) 222, 311, 320, 572, 1247, 1676, 1733
BspANI GGCC 6 cut(s) 74, 156, 314, 1478, 1767, 2276
BspCNI CTCAG 3 cut(s) 243, 792, 2172
BspFNI CGCG 1 cut(s) 1676
BspHI TCATGA 2 cut(s) 966, 2268
BspLI GGNNCC 3 cut(s) 326, 1652, 2292
BspMAI CTGCAG 1 cut(s) 964
BspPI GGATC 1 cut(s) 111
BspT104I TTCGAA 2 cut(s) 33, 340
BspT107I GGYRCC 2 cut(s) 1650, 2290
BsrDI GCAATG 5 cut(s) 48, 306, 1679, 1697, 1872
BsrGI TGTACA 1 cut(s) 289
BsrI ACTGG 4 cut(s) 845, 1147, 1472, 2222
BssECI CCNNGG 7 cut(s) 120, 315, 1359, 1658, 1842, 2016, 2070
BssMI GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
BssT1I CCWWGG 5 cut(s) 120, 315, 1359, 1658, 2070
Bst2UI CCWGG 5 cut(s) 945, 1484, 1671, 1911, 2018
Bst6I CTCTTC 3 cut(s) 371, 912, 1559
BstAPI GCANNNNNTGC 2 cut(s) 1883, 1967
BstAUI TGTACA 1 cut(s) 289
BstBI TTCGAA 2 cut(s) 33, 340
BstC8I GCNNGC 3 cut(s) 1224, 1937, 2219
BstDEI CTNAG 5 cut(s) 230, 708, 779, 1519, 2180
BstDSI CCRYGG 1 cut(s) 2070
BstF5I GGATG 3 cut(s) 1479, 1492, 2117
BstFNI CGCG 1 cut(s) 1676
BstHHI GCGC 1 cut(s) 1676
BstKTI GATC 7 cut(s) 119, 447, 637, 1025, 1243, 1327, 2266
BstMBI GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
BstNI CCWGG 5 cut(s) 945, 1484, 1671, 1911, 2018
BstNSI RCATGY 3 cut(s) 759, 989, 1644
BstSCI CCNGG 6 cut(s) 531, 943, 1482, 1669, 1909, 2016
BstSFI CTRYAG 3 cut(s) 144, 960, 1217
BstUI CGCG 1 cut(s) 1676
BstV2I GAAGAC 1 cut(s) 2014
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BsuI GTATCC 1 cut(s) 1038
BsuRI GGCC 6 cut(s) 74, 156, 314, 1478, 1767, 2276
BtgI CCRYGG 1 cut(s) 2070
BtsCI GGATG 3 cut(s) 1479, 1492, 2117
BtsI GCAGTG 1 cut(s) 853
BtsIMutI CAGTG 6 cut(s) 853, 1479, 1624, 1972, 2108, 2198
Cac8I GCNNGC 3 cut(s) 1224, 1937, 2219
CaiI CAGNNNCTG 2 cut(s) 1096, 1904
CciI TCATGA 2 cut(s) 966, 2268
CfoI GCGC 1 cut(s) 1676
Cfr13I GGNCC 3 cut(s) 902, 1093, 2274
CseI GACGC 2 cut(s) 859, 1583
Csp6I GTAC 8 cut(s) 227, 290, 529, 894, 1116, 1651, 1907, 2291
CviQI GTAC 8 cut(s) 227, 290, 529, 894, 1116, 1651, 1907, 2291
DdeI CTNAG 5 cut(s) 230, 708, 779, 1519, 2180
DpnI GATC 7 cut(s) 118, 446, 636, 1024, 1242, 1326, 2265
DpnII GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
DrdI GACNNNNNNGTC 1 cut(s) 1288
DseDI GACNNNNNNGTC 1 cut(s) 1288
EaeI YGGCCR 3 cut(s) 154, 312, 1476
Eam1104I CTCTTC 3 cut(s) 371, 912, 1559
EarI CTCTTC 3 cut(s) 371, 912, 1559
Eco130I CCWWGG 5 cut(s) 120, 315, 1359, 1658, 2070
Eco147I AGGCCT 1 cut(s) 74
Eco47I GGWCC 2 cut(s) 902, 1093
Eco57I CTGAAG 3 cut(s) 484, 1544, 1881
Eco88I CYCGRG 1 cut(s) 281
EcoO109I RGGNCCY 1 cut(s) 1093
EcoRII CCWGG 5 cut(s) 943, 1482, 1669, 1909, 2016
EcoT14I CCWWGG 5 cut(s) 120, 315, 1359, 1658, 2070
EcoT22I ATGCAT 2 cut(s) 604, 761
ErhI CCWWGG 5 cut(s) 120, 315, 1359, 1658, 2070
Esp3I CGTCTC 5 cut(s) 198, 337, 573, 711, 1271
FalI AAGNNNNNCTT 2 cut(s) 687, 719
FauI CCCGC 1 cut(s) 313
FbaI TGATCA 2 cut(s) 1240, 1324
FblI GTMKAC 1 cut(s) 619
FokI GGATG 3 cut(s) 1466, 1499, 2104
FspBI CTAG 8 cut(s) 173, 201, 269, 584, 588, 1460, 1988, 2323
GlaI GCGC 1 cut(s) 1675
GsaI CCCAGC 1 cut(s) 1173
GsuI CTGGAG 1 cut(s) 927
HaeIII GGCC 6 cut(s) 74, 156, 314, 1478, 1767, 2276
HapII CCGG 2 cut(s) 489, 533
HgaI GACGC 2 cut(s) 859, 1583
HhaI GCGC 1 cut(s) 1676
Hin6I GCGC 1 cut(s) 1674
HinP1I GCGC 1 cut(s) 1674
HincII GTYRAC 3 cut(s) 620, 1111, 1492
HindII GTYRAC 3 cut(s) 620, 1111, 1492
HindIII AAGCTT 1 cut(s) 1224
HinfI GANTC 3 cut(s) 627, 922, 1847
HpaII CCGG 2 cut(s) 489, 533
HphI GGTGA 6 cut(s) 193, 365, 473, 503, 1398, 1966
Hpy166II GTNNAC 7 cut(s) 184, 544, 620, 1111, 1492, 1549, 1646
Hpy188I TCNGA 8 cut(s) 10, 449, 516, 782, 1240, 1329, 1563, 1846
Hpy188III TCNNGA 7 cut(s) 98, 283, 967, 1020, 1096, 2046, 2269
Hpy8I GTNNAC 7 cut(s) 184, 544, 620, 1111, 1492, 1549, 1646
Hpy99I CGWCG 3 cut(s) 212, 914, 917
HpyAV CCTTC 4 cut(s) 419, 1604, 1811, 1981
HpyCH4IV ACGT 1 cut(s) 2228
HpyF3I CTNAG 5 cut(s) 230, 708, 779, 1519, 2180
HpySE526I ACGT 1 cut(s) 2228
HspAI GCGC 1 cut(s) 1674
KpnI GGTACC 2 cut(s) 1654, 2294
Ksp22I TGATCA 2 cut(s) 1240, 1324
Kzo9I GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
LmnI GCTCC 4 cut(s) 324, 863, 947, 2301
LweI GCATC 4 cut(s) 202, 959, 1744, 2126
MaeI CTAG 8 cut(s) 173, 201, 269, 584, 588, 1460, 1988, 2323
MaeII ACGT 1 cut(s) 2228
MaeIII GTNAC 7 cut(s) 386, 972, 1404, 1435, 1613, 1739, 2224
MalI GATC 7 cut(s) 118, 446, 636, 1024, 1242, 1326, 2265
MboI GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
MflI RGATCY 1 cut(s) 116
MlsI TGGCCA 1 cut(s) 1478
MluCI AATT 7 cut(s) 519, 1035, 1103, 1306, 1416, 1466, 1941
MluNI TGGCCA 1 cut(s) 1478
MlyI GAGTC 1 cut(s) 621
MmeI TCCRAC 1 cut(s) 1581
Mox20I TGGCCA 1 cut(s) 1478
Mph1103I ATGCAT 2 cut(s) 604, 761
MroXI GAANNNNTTC 1 cut(s) 767
MscI TGGCCA 1 cut(s) 1478
MseI TTAA 5 cut(s) 381, 800, 1254, 1415, 2093
Msp20I TGGCCA 1 cut(s) 1478
MspA1I CMGCKG 4 cut(s) 574, 615, 1173, 2248
MspI CCGG 2 cut(s) 489, 533
MspR9I CCNGG 6 cut(s) 533, 945, 1484, 1671, 1911, 2018
Mva1269I GAATGC 2 cut(s) 602, 1961
MvaI CCWGG 5 cut(s) 945, 1484, 1671, 1911, 2018
MvnI CGCG 1 cut(s) 1676
NciI CCSGG 1 cut(s) 533
NcoI CCATGG 1 cut(s) 2070
NdeII GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
NlaIV GGNNCC 3 cut(s) 326, 1652, 2292
NmuCI GTSAC 2 cut(s) 972, 1404
NsiI ATGCAT 2 cut(s) 604, 761
NspI RCATGY 3 cut(s) 759, 989, 1644
NspV TTCGAA 2 cut(s) 33, 340
PagI TCATGA 2 cut(s) 966, 2268
PceI AGGCCT 1 cut(s) 74
PciI ACATGT 1 cut(s) 1640
PctI GAATGC 2 cut(s) 602, 1961
PdmI GAANNNNTTC 1 cut(s) 767
PfeI GAWTC 2 cut(s) 922, 1847
PfoI TCCNGGA 2 cut(s) 943, 1482
PleI GAGTC 1 cut(s) 621
PpsI GAGTC 1 cut(s) 621
PpuMI RGGWCCY 1 cut(s) 1093
PscI ACATGT 1 cut(s) 1640
PsiI TTATAA 1 cut(s) 1811
Psp5II RGGWCCY 1 cut(s) 1093
Psp6I CCWGG 5 cut(s) 943, 1482, 1669, 1909, 2016
PspFI CCCAGC 1 cut(s) 1169
PspGI CCWGG 5 cut(s) 943, 1482, 1669, 1909, 2016
PspN4I GGNNCC 3 cut(s) 326, 1652, 2292
PspPI GGNCC 3 cut(s) 902, 1093, 2274
PspPPI RGGWCCY 1 cut(s) 1093
PstI CTGCAG 1 cut(s) 964
PstNI CAGNNNCTG 2 cut(s) 1096, 1904
PsuI RGATCY 1 cut(s) 116
PvuII CAGCTG 3 cut(s) 615, 1173, 2248
RsaI GTAC 8 cut(s) 228, 291, 530, 895, 1117, 1652, 1908, 2292
RsaNI GTAC 8 cut(s) 227, 290, 529, 894, 1116, 1651, 1907, 2291
SalI GTCGAC 1 cut(s) 618
SaqAI TTAA 5 cut(s) 381, 800, 1254, 1415, 2093
Sau3AI GATC 7 cut(s) 116, 444, 634, 1022, 1240, 1324, 2263
Sau96I GGNCC 3 cut(s) 902, 1093, 2274
ScaI AGTACT 1 cut(s) 228
SchI GAGTC 1 cut(s) 621
ScrFI CCNGG 6 cut(s) 533, 945, 1484, 1671, 1911, 2018
SfaNI GCATC 4 cut(s) 202, 959, 1744, 2126
SfcI CTRYAG 3 cut(s) 144, 960, 1217
SfuI TTCGAA 2 cut(s) 33, 340
SinI GGWCC 2 cut(s) 902, 1093
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SpeI ACTAGT 1 cut(s) 1987
Sse9I AATT 7 cut(s) 519, 1035, 1103, 1306, 1416, 1466, 1941
SseBI AGGCCT 1 cut(s) 74
SsiI CCGC 7 cut(s) 222, 311, 320, 572, 1247, 1676, 1733
SspMI CTAG 8 cut(s) 173, 201, 269, 584, 588, 1460, 1988, 2323
StuI AGGCCT 1 cut(s) 74
StyD4I CCNGG 6 cut(s) 531, 943, 1482, 1669, 1909, 2016
StyI CCWWGG 5 cut(s) 120, 315, 1359, 1658, 2070
TaiI ACGT 1 cut(s) 2231
TaqI TCGA 7 cut(s) 33, 340, 443, 619, 672, 1135, 2047
TasI AATT 7 cut(s) 519, 1035, 1103, 1306, 1416, 1466, 1941
TatI WGTACW 3 cut(s) 226, 289, 1115
TauI GCSGC 4 cut(s) 314, 1250, 1679, 1735
TfiI GAWTC 2 cut(s) 922, 1847
Tru1I TTAA 5 cut(s) 381, 800, 1254, 1415, 2093
Tru9I TTAA 5 cut(s) 381, 800, 1254, 1415, 2093
TscAI CASTG 6 cut(s) 860, 1479, 1624, 1972, 2115, 2205
TseFI GTSAC 2 cut(s) 972, 1404
Tsp45I GTSAC 2 cut(s) 972, 1404
TspGWI ACGGA 3 cut(s) 325, 735, 2314
TspRI CASTG 6 cut(s) 860, 1479, 1624, 1972, 2115, 2205
VpaK11BI GGWCC 2 cut(s) 902, 1093
XapI RAATTY 2 cut(s) 1035, 1466
XceI RCATGY 3 cut(s) 759, 989, 1644
XmiI GTMKAC 1 cut(s) 619
XmnI GAANNNNTTC 1 cut(s) 767
XspI CTAG 8 cut(s) 173, 201, 269, 584, 588, 1460, 1988, 2323
ZrmI AGTACT 1 cut(s) 228
Zsp2I ATGCAT 2 cut(s) 604, 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.