RchiOBHm_Chr4g0413451

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0001790
Physical Location & Seq
Forward (+)
37672279 .. 37676296
4018 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38397

Sequence Viewer

Length: 2292 bp
ATGGCTTCAGATGAGGAAATAGATAGCTTGTTCGAAAACGCGATGAAAGGACAATGGGAAAAGGTCATGGAGGCCTACAGAAATAGTATTACAGCTCAAGTAGCCAAGGTAACCAGATCCAAGGAGACTGCTCTGCACATAGCTATAGCAGATGGCCGAACTGAAATCGTCCTAGAGTTGGTGAACATTATTCTCCATACTCATGAAGACGACAGTGCATCAACCGCAGTACTCAGCATAGCAAATGATAGAGGCAACACGCCTCTACATCTAGCTGCTTGGCTCGGGAATGTACAAGTGTGCCACAACATTGCAGCCAAGGCAGCGAGCCTCATCTCCGTTCGAAATGTGGAGGGCGAGACACCTCTCTTCTTGGCTGCCCTTAACGGTAACACAAAGGCTTTTCTTTGCCTAAATTTTCATTGCCAAGAAAAACCCCATTCCTCGATCAGAGACAACAATGGTGATACCATTCTTCATGCTGCAATCTCCGGTGAATACTTCAGTTTGGCATTTCAGATAATTTGGATGTACCCAGAACTTGTGAACTCTATCAATCGAAATGGTTCGTCTCCGCTGCATATTCTAGCCAGTAAGCCCAATGCATTCAAAAGCAGCTGTCGACTTGAACTCTGTGATCATCTTATATACAAATGTTTGATGATTGAAGAACTCAAAGTGGAAGAATATAACCATGAAGCTTGTCTTTCTAAGGCAGGAGACAGAAATAGTTCTTCATACCCAGAAAACTATGAAACATGCATGAATTTCTTCCAAGTTCTCAGAAGTTTGTTTCAAGTGTGGCACGTATACTGGCATAAGACGCACAGCTCACTCCTTCAAGCTAATGGAGGAAATGCGAAGGGTACTAATGGTCCTGTTGATGATGAAGAGAATCCCAAACAAGGAATTTGGGGTATAAGAAAAATCCAAGAAAAGAAAGAGAGACATATATGGGCAAATCAGGTCATGAATGAATTGGTTGATCGTGCTTCTTTATACAAATATCGAAATACTGGGCAAAATCCCCAAGAAACTCAACCCAGCAAAGATAAAGAAGAATATGAAGTGCCTAATCCTACAATGCCAGAGCAAGCTTCACCCTTGCCATCTGATCATGCGGCACTTGACAGTAGAGATACAAGTACTGAGACGACTATCTTGTCCTCAAACCAGTACAATTACAAGATAGGGAGTGATAAGAATGAACAAGGTGAGTTAACTTCTCCGCCCTTTCTTGTTTACACTGCATTCTTCATTGACATCACAAGACTTGGAGATTTCCACACTCATCATGCTGCTCATTGCACAGAGAGGAAGAACAATAATCCCTTGGTAGGTAAGAAGAATGTAGTTCCTGGAAAGAATCAGTCACCTGTTTTAATTGCAGCAAAGATGGGAATAACTGAAATGGTGGAGAAAATCCTAGACAAATTTCCGGTGGCCATCCAGGATGTTGACTCTGATAACAAGAATGTTATACTCTTAGCAGTTGAGAACAGGCAACCCCATGTGTACAATCTCCTTCAGAAGAGAGAGATACTAAAAGAAAGCCTGTTTCGTCAGTTGGACAACGAAGGTAATAGTGCATTACATCTTGCTGCTACATGTGGACAGTACCGGCCTTGGCTTATTCCAGGCGCGGCATTGCAAATGCAATGGGAAATCAAGTGGTATAAGTTTGTCAAAAACTCCATGCCGCATCGTTACTTTGTTCGCTACAACAATAGAGGCCAAACACCAAAGGAGATATTTGAAGATACACACAAACATCTTATAAAAGAAGGAAGCAAATGGCTAATTAAAACCTCAGAATCATGCTCCGTGGTTGCAGCCCTCATTGCAACGGTTGCATTTGCTACATCAGCAACTGTACCAGGAGGACTCGATCAGCATACAGGCGAGCCAATTCTCAAAGACAAGACAGCATTCAGTGCCTTCACCATTTCATCACTAGTTGCTCTCTGCTTCTCAATAACTTCCCTGGACTTCTTTCTTTCAATCCTCACTTCTAGATATGAAGAAAGTGATTTTTCCATGGACTTGCCTCGGAAACTCTTGATCGGTTTGACATCACTCTTTGCATCTATAGCTTCTATGTTAGTCTCGTTCTGCACAGGTCATATCTTTCTCCTAAAACATCAACTGAGATATGTGGCATATTCATTGTATGCAGCAACTTGCTTGCCAGTTACATTTTTCGCTCTTGCACAGCTGCCGCTCTACTTTGATCTCATGAAGGCCATCATCAGAAAGGTACCTCAACGGAGCTACGAGGTGTATCCACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

763

Amino Acids

85.96

Weight (kDa)

6.5

Isoelectric Point (pI)

39.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 39 - 105 2.4e-07 Ankyrin repeats (3 copies)
PGG PF13962 598 - 709 2e-26 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1778
AasI GACNNNNNNGTC 1 cut(s) 1162
Acc65I GGTACC 1 cut(s) 2257
AccB1I GGYRCC 1 cut(s) 2257
AccBSI CCGCTC 1 cut(s) 2221
AccI GTMKAC 2 cut(s) 622, 810
AccII CGCG 2 cut(s) 41, 1643
AciI CCGC 7 cut(s) 225, 575, 1121, 1229, 1643, 1700, 2219
AclWI GGATC 1 cut(s) 111
AcoI YGGCCR 2 cut(s) 154, 1443
AcsI RAATTY 4 cut(s) 415, 766, 909, 1433
AcuI CTGAAG 2 cut(s) 487, 1511
AfiI CCNNNNNNNGG 3 cut(s) 178, 905, 1337
AflIII ACRYGT 1 cut(s) 1607
AgsI TTSAA 7 cut(s) 610, 629, 668, 797, 842, 1757, 2001
AhlI ACTAGT 1 cut(s) 1954
AjnI CCWGG 5 cut(s) 1357, 1449, 1636, 1876, 1983
Alw26I GTCTC 8 cut(s) 119, 353, 447, 576, 714, 940, 1145, 2110
AlwI GGATC 1 cut(s) 111
AlwNI CAGNNNCTG 1 cut(s) 1871
Ama87I CYCGRG 1 cut(s) 284
AoxI GGCC 6 cut(s) 72, 154, 1443, 1622, 1732, 2241
ApoI RAATTY 4 cut(s) 415, 766, 909, 1433
Asp700I GAANNNNTTC 3 cut(s) 565, 730, 770
Asp718I GGTACC 1 cut(s) 2257
AspLEI GCGC 1 cut(s) 1643
AspS9I GGNCC 1 cut(s) 875
AsuHPI GGTGA 7 cut(s) 193, 476, 506, 1092, 1226, 1365, 1933
AsuII TTCGAA 2 cut(s) 33, 343
AvaI CYCGRG 1 cut(s) 284
AvaII GGWCC 1 cut(s) 875
BalI TGGCCA 1 cut(s) 1445
BanI GGYRCC 1 cut(s) 2257
BbsI GAAGAC 1 cut(s) 213
BccI CCATC 5 cut(s) 146, 1117, 1390, 1454, 2252
BciT130I CCWGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
BciVI GTATCC 1 cut(s) 2292
BclI TGATCA 2 cut(s) 637, 1114
BcoDI GTCTC 8 cut(s) 119, 353, 447, 576, 714, 940, 1145, 2110
BcuI ACTAGT 1 cut(s) 1954
BfaI CTAG 6 cut(s) 173, 272, 587, 1427, 1955, 2013
BfmI CTRYAG 3 cut(s) 76, 144, 2088
BfuI GTATCC 1 cut(s) 2292
BmcAI AGTACT 2 cut(s) 231, 1147
Bme1390I CCNGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
Bme18I GGWCC 1 cut(s) 875
BmeT110I CYCGRG 1 cut(s) 284
BmgT120I GGNCC 1 cut(s) 875
BmiI GGNNCC 1 cut(s) 2259
BmrFI CCNGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
BmrI ACTGGG 1 cut(s) 1026
BmsI GCATC 3 cut(s) 227, 1711, 2093
BmuI ACTGGG 1 cut(s) 1026
BpiI GAAGAC 1 cut(s) 213
Bpu14I TTCGAA 2 cut(s) 33, 343
BpuEI CTTGAG 1 cut(s) 81
BsaAI YACGTR 1 cut(s) 808
BsaJI CCNNGG 9 cut(s) 105, 120, 318, 1332, 1625, 1824, 1983, 2037, 2048
BsaWI WCCGGW 2 cut(s) 491, 1438
Bsc4I CCNNNNNNNGG 3 cut(s) 178, 905, 1337
Bse118I RCCGGY 1 cut(s) 1620
Bse1I ACTGG 5 cut(s) 591, 818, 1021, 1174, 2189
Bse3DI GCAATG 6 cut(s) 309, 421, 1303, 1646, 1664, 1839
BseBI CCWGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
BseDI CCNNGG 9 cut(s) 105, 120, 318, 1332, 1625, 1824, 1983, 2037, 2048
BseGI GGATG 3 cut(s) 534, 1446, 1459
BseLI CCNNNNNNNGG 3 cut(s) 178, 905, 1337
BseMI GCAATG 6 cut(s) 309, 421, 1303, 1646, 1664, 1839
BseMII CTCAG 5 cut(s) 247, 796, 1140, 1824, 2138
BseNI ACTGG 5 cut(s) 591, 818, 1021, 1174, 2189
BseYI CCCAGC 1 cut(s) 1043
BsgI GTGCAG 2 cut(s) 119, 2098
Bsh1236I CGCG 2 cut(s) 41, 1643
BshFI GGCC 6 cut(s) 74, 156, 1445, 1624, 1734, 2243
BshNI GGYRCC 1 cut(s) 2257
BsiHKCI CYCGRG 1 cut(s) 284
BsiSI CCGG 3 cut(s) 492, 1439, 1621
BslI CCNNNNNNNGG 3 cut(s) 178, 905, 1337
BsmAI GTCTC 8 cut(s) 119, 353, 447, 576, 714, 940, 1145, 2110
BsmBI CGTCTC 2 cut(s) 576, 1145
BsmI GAATGC 3 cut(s) 605, 1250, 1928
BsnI GGCC 6 cut(s) 74, 156, 1445, 1624, 1734, 2243
BsoBI CYCGRG 1 cut(s) 284
Bsp119I TTCGAA 2 cut(s) 33, 343
Bsp1407I TGTACA 2 cut(s) 292, 1515
Bsp143I GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
Bsp19I CCATGG 1 cut(s) 2037
BspACI CCGC 7 cut(s) 225, 575, 1121, 1229, 1643, 1700, 2219
BspANI GGCC 6 cut(s) 74, 156, 1445, 1624, 1734, 2243
BspCNI CTCAG 5 cut(s) 246, 795, 1141, 1823, 2139
BspFNI CGCG 2 cut(s) 41, 1643
BspHI TCATGA 3 cut(s) 202, 969, 2235
BspLI GGNNCC 1 cut(s) 2259
BspPI GGATC 1 cut(s) 111
BspT104I TTCGAA 2 cut(s) 33, 343
BspT107I GGYRCC 1 cut(s) 2257
BsrBI CCGCTC 1 cut(s) 2221
BsrDI GCAATG 6 cut(s) 309, 421, 1303, 1646, 1664, 1839
BsrFI RCCGGY 1 cut(s) 1620
BsrGI TGTACA 2 cut(s) 292, 1515
BsrI ACTGG 5 cut(s) 591, 818, 1021, 1174, 2189
BssAI RCCGGY 1 cut(s) 1620
BssECI CCNNGG 9 cut(s) 105, 120, 318, 1332, 1625, 1824, 1983, 2037, 2048
BssMI GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
BssNAI GTATAC 1 cut(s) 811
BssT1I CCWWGG 6 cut(s) 105, 120, 318, 1332, 1625, 2037
Bst1107I GTATAC 1 cut(s) 811
Bst2UI CCWGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
Bst4CI ACNGT 6 cut(s) 215, 389, 1133, 1617, 1849, 1873
Bst6I CTCTTC 3 cut(s) 374, 885, 1526
BstAPI GCANNNNNTGC 2 cut(s) 1850, 1934
BstAUI TGTACA 2 cut(s) 292, 1515
BstBAI YACGTR 1 cut(s) 808
BstBI TTCGAA 2 cut(s) 33, 343
BstC8I GCNNGC 4 cut(s) 328, 1095, 1904, 2186
BstDEI CTNAG 7 cut(s) 233, 711, 782, 1149, 1486, 1810, 2147
BstDSI CCRYGG 2 cut(s) 1824, 2037
BstEII GGTNACC 1 cut(s) 109
BstF5I GGATG 3 cut(s) 534, 1446, 1459
BstFNI CGCG 2 cut(s) 41, 1643
BstHHI GCGC 1 cut(s) 1643
BstKTI GATC 8 cut(s) 119, 450, 640, 988, 1117, 1891, 2064, 2233
BstMAI GTCTC 8 cut(s) 119, 353, 447, 576, 714, 940, 1145, 2110
BstMBI GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
BstNI CCWGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
BstNSI RCATGY 2 cut(s) 762, 1611
BstPI GGTNACC 1 cut(s) 109
BstSCI CCNGG 5 cut(s) 1357, 1449, 1636, 1876, 1983
BstSFI CTRYAG 3 cut(s) 76, 144, 2088
BstUI CGCG 2 cut(s) 41, 1643
BstV2I GAAGAC 1 cut(s) 213
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BstZ17I GTATAC 1 cut(s) 811
BsuI GTATCC 1 cut(s) 2292
BsuRI GGCC 6 cut(s) 74, 156, 1445, 1624, 1734, 2243
BtgI CCRYGG 2 cut(s) 1824, 2037
BtgZI GCGATG 1 cut(s) 56
BtsCI GGATG 3 cut(s) 534, 1446, 1459
BtsI GCAGTG 1 cut(s) 1245
BtsIMutI CAGTG 3 cut(s) 220, 1245, 1939
Cac8I GCNNGC 4 cut(s) 328, 1095, 1904, 2186
CaiI CAGNNNCTG 1 cut(s) 1871
CciI TCATGA 3 cut(s) 202, 969, 2235
CfoI GCGC 1 cut(s) 1643
Cfr10I RCCGGY 1 cut(s) 1620
Cfr13I GGNCC 1 cut(s) 875
CseI GACGC 1 cut(s) 832
DdeI CTNAG 7 cut(s) 233, 711, 782, 1149, 1486, 1810, 2147
DpnI GATC 8 cut(s) 118, 449, 639, 987, 1116, 1890, 2063, 2232
DpnII GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
DrdI GACNNNNNNGTC 1 cut(s) 1162
DseDI GACNNNNNNGTC 1 cut(s) 1162
EaeI YGGCCR 2 cut(s) 154, 1443
Eam1104I CTCTTC 3 cut(s) 374, 885, 1526
EarI CTCTTC 3 cut(s) 374, 885, 1526
EciI GGCGGA 1 cut(s) 1218
Eco130I CCWWGG 6 cut(s) 105, 120, 318, 1332, 1625, 2037
Eco147I AGGCCT 1 cut(s) 74
Eco47I GGWCC 1 cut(s) 875
Eco57I CTGAAG 2 cut(s) 487, 1511
Eco88I CYCGRG 1 cut(s) 284
Eco91I GGTNACC 1 cut(s) 109
EcoO65I GGTNACC 1 cut(s) 109
EcoRII CCWGG 5 cut(s) 1357, 1449, 1636, 1876, 1983
EcoT14I CCWWGG 6 cut(s) 105, 120, 318, 1332, 1625, 2037
EcoT22I ATGCAT 2 cut(s) 607, 764
ErhI CCWWGG 6 cut(s) 105, 120, 318, 1332, 1625, 2037
Esp3I CGTCTC 2 cut(s) 576, 1145
FalI AAGNNNNNCTT 2 cut(s) 690, 722
FbaI TGATCA 2 cut(s) 637, 1114
FblI GTMKAC 2 cut(s) 622, 810
FokI GGATG 3 cut(s) 541, 1433, 1466
FspBI CTAG 6 cut(s) 173, 272, 587, 1427, 1955, 2013
GlaI GCGC 1 cut(s) 1642
GsaI CCCAGC 1 cut(s) 1047
HaeIII GGCC 6 cut(s) 74, 156, 1445, 1624, 1734, 2243
HapII CCGG 3 cut(s) 492, 1439, 1621
HgaI GACGC 1 cut(s) 832
HhaI GCGC 1 cut(s) 1643
Hin6I GCGC 1 cut(s) 1641
HinP1I GCGC 1 cut(s) 1641
HincII GTYRAC 3 cut(s) 623, 1221, 1459
HindII GTYRAC 3 cut(s) 623, 1221, 1459
HindIII AAGCTT 2 cut(s) 699, 1095
HinfI GANTC 5 cut(s) 895, 1366, 1460, 1814, 1884
HpaI GTTAAC 1 cut(s) 1221
HpaII CCGG 3 cut(s) 492, 1439, 1621
HphI GGTGA 7 cut(s) 193, 476, 506, 1092, 1226, 1365, 1933
Hpy166II GTNNAC 9 cut(s) 184, 547, 623, 811, 1221, 1243, 1459, 1516, 1613
Hpy188III TCNNGA 6 cut(s) 203, 286, 970, 2013, 2059, 2236
Hpy8I GTNNAC 9 cut(s) 184, 547, 623, 811, 1221, 1243, 1459, 1516, 1613
HpyAV CCTTC 7 cut(s) 848, 856, 1535, 1571, 1778, 1948, 2233
HpyCH4III ACNGT 6 cut(s) 215, 389, 1133, 1617, 1849, 1873
HpyCH4IV ACGT 1 cut(s) 807
HpyF3I CTNAG 7 cut(s) 233, 711, 782, 1149, 1486, 1810, 2147
HpySE526I ACGT 1 cut(s) 807
HspAI GCGC 1 cut(s) 1641
KpnI GGTACC 1 cut(s) 2261
Ksp22I TGATCA 2 cut(s) 637, 1114
KspAI GTTAAC 1 cut(s) 1221
Kzo9I GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
LmnI GCTCC 2 cut(s) 1826, 2268
LweI GCATC 3 cut(s) 227, 1711, 2093
MaeI CTAG 6 cut(s) 173, 272, 587, 1427, 1955, 2013
MaeII ACGT 1 cut(s) 807
MaeIII GTNAC 5 cut(s) 109, 389, 1371, 1706, 2191
MalI GATC 8 cut(s) 118, 449, 639, 987, 1116, 1890, 2063, 2232
MbiI CCGCTC 1 cut(s) 2221
MboI GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
MflI RGATCY 1 cut(s) 116
MlsI TGGCCA 1 cut(s) 1445
MluNI TGGCCA 1 cut(s) 1445
MlyI GAGTC 2 cut(s) 1454, 1878
MmeI TCCRAC 1 cut(s) 1548
Mox20I TGGCCA 1 cut(s) 1445
Mph1103I ATGCAT 2 cut(s) 607, 764
MroXI GAANNNNTTC 3 cut(s) 565, 730, 770
MscI TGGCCA 1 cut(s) 1445
MseI TTAA 4 cut(s) 384, 1220, 1382, 1803
MslI CAYNNNNRTG 1 cut(s) 201
Msp20I TGGCCA 1 cut(s) 1445
MspA1I CMGCKG 3 cut(s) 577, 618, 2215
MspI CCGG 3 cut(s) 492, 1439, 1621
MspR9I CCNGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
Mva1269I GAATGC 3 cut(s) 605, 1250, 1928
MvaI CCWGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
MvnI CGCG 2 cut(s) 41, 1643
NcoI CCATGG 1 cut(s) 2037
NdeII GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
NlaIV GGNNCC 1 cut(s) 2259
NmuCI GTSAC 1 cut(s) 1371
NsiI ATGCAT 2 cut(s) 607, 764
NspI RCATGY 2 cut(s) 762, 1611
NspV TTCGAA 2 cut(s) 33, 343
PagI TCATGA 3 cut(s) 202, 969, 2235
PceI AGGCCT 1 cut(s) 74
PciI ACATGT 1 cut(s) 1607
PctI GAATGC 3 cut(s) 605, 1250, 1928
PdmI GAANNNNTTC 3 cut(s) 565, 730, 770
PfeI GAWTC 3 cut(s) 895, 1366, 1814
PfoI TCCNGGA 2 cut(s) 1357, 1449
PleI GAGTC 2 cut(s) 1454, 1878
PpsI GAGTC 2 cut(s) 1454, 1878
Ppu21I YACGTR 1 cut(s) 808
PscI ACATGT 1 cut(s) 1607
PsiI TTATAA 1 cut(s) 1778
Psp6I CCWGG 5 cut(s) 1357, 1449, 1636, 1876, 1983
PspEI GGTNACC 1 cut(s) 109
PspFI CCCAGC 1 cut(s) 1043
PspGI CCWGG 5 cut(s) 1357, 1449, 1636, 1876, 1983
PspN4I GGNNCC 1 cut(s) 2259
PspPI GGNCC 1 cut(s) 875
PstNI CAGNNNCTG 1 cut(s) 1871
PsuI RGATCY 1 cut(s) 116
PvuII CAGCTG 2 cut(s) 618, 2215
RseI CAYNNNNRTG 1 cut(s) 201
SalI GTCGAC 1 cut(s) 621
SaqAI TTAA 4 cut(s) 384, 1220, 1382, 1803
Sau3AI GATC 8 cut(s) 116, 447, 637, 985, 1114, 1888, 2061, 2230
Sau96I GGNCC 1 cut(s) 875
ScaI AGTACT 2 cut(s) 231, 1147
SchI GAGTC 2 cut(s) 1454, 1878
ScrFI CCNGG 5 cut(s) 1359, 1451, 1638, 1878, 1985
SfaNI GCATC 3 cut(s) 227, 1711, 2093
SfcI CTRYAG 3 cut(s) 76, 144, 2088
SfuI TTCGAA 2 cut(s) 33, 343
SinI GGWCC 1 cut(s) 875
SmiMI CAYNNNNRTG 1 cut(s) 201
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SpeI ACTAGT 1 cut(s) 1954
SseBI AGGCCT 1 cut(s) 74
SsiI CCGC 7 cut(s) 225, 575, 1121, 1229, 1643, 1700, 2219
SspMI CTAG 6 cut(s) 173, 272, 587, 1427, 1955, 2013
StuI AGGCCT 1 cut(s) 74
StyD4I CCNGG 5 cut(s) 1357, 1449, 1636, 1876, 1983
StyI CCWWGG 6 cut(s) 105, 120, 318, 1332, 1625, 2037
TaaI ACNGT 6 cut(s) 215, 389, 1133, 1617, 1849, 1873
TaiI ACGT 1 cut(s) 810
TaqI TCGA 7 cut(s) 33, 343, 446, 559, 622, 1009, 1887
TatI WGTACW 5 cut(s) 229, 292, 1145, 1176, 1515
TauI GCSGC 4 cut(s) 1124, 1646, 1702, 2221
TfiI GAWTC 3 cut(s) 895, 1366, 1814
Tru1I TTAA 4 cut(s) 384, 1220, 1382, 1803
Tru9I TTAA 4 cut(s) 384, 1220, 1382, 1803
TscAI CASTG 3 cut(s) 220, 1252, 1939
TseFI GTSAC 1 cut(s) 1371
Tsp45I GTSAC 1 cut(s) 1371
TspGWI ACGGA 3 cut(s) 328, 1813, 2281
TspRI CASTG 3 cut(s) 220, 1252, 1939
VpaK11BI GGWCC 1 cut(s) 875
XapI RAATTY 4 cut(s) 415, 766, 909, 1433
XbaI TCTAGA 1 cut(s) 2012
XceI RCATGY 2 cut(s) 762, 1611
XmiI GTMKAC 2 cut(s) 622, 810
XmnI GAANNNNTTC 3 cut(s) 565, 730, 770
XspI CTAG 6 cut(s) 173, 272, 587, 1427, 1955, 2013
ZrmI AGTACT 2 cut(s) 231, 1147
Zsp2I ATGCAT 2 cut(s) 607, 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.