Rh4AG180100

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0001790
Physical Location & Seq
Forward (+)
44998136 .. 45030820
32685 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG180100.1

Sequence Viewer

Length: 954 bp
ATGCTGCAGCACGGTCTGGCAATTAAGCAAATGGTGTTTAGCCATCTCTTCTGCCTCCAGCTTGAAGAAGATGTCAATGAAGTTATTTTTGCCCTTCCTTCAGCTTCCTGTATCAAGGAGGATGGCTTCGCCAAAGCCACTCTTCAACTTGAGAAATTGTTAAAATTGGAGCACCCGGAGATAAGCCAAAGCATTATAGATGCTACAAAGAAGATAAGACATCTAAAAGACAACAATGGTGATACCATTCTTCATGCTGCAATCTCCGGTGAATACTTCAGTAAAAAGAGGGGAGATAGGTGGCACGTATACTGGCCTAAGACGCACAGCTCACTCCTTCAAGCTAATGGAGGAAATGCGAAGGGTACTAATGGTCCTGTTGATGATGAAGAGAATCCCAAACAAGAGGCTACTCTAGGAGCATCAACTTCTACAGTGAGGTCACAATCAACAGATGTTACAAACGAAATATCAGATGCAAAGTGTTCAAGATCAACCAATGGGGCAAATCATCCAGAGGGAAAGGGGAGAAAGAATCACCTGTTTCCTCCCAATTATGTCTCATTTGTTCTGTTGTTCAAGTTTCTGATGAAGGCCTTGCTAATCATTCTGGGATTTGGAATTTGGGGTATAAGAAAAATCCAAGAAAAGAAAGAGAGACATATATGGGCAAATCAGGTCATGAATGAATTGGTTGATCGTACTTCTTTATACAAATATCGAAATACTGGGCAAAATCCCCAAGAAACTCAACCCAGCAAAGATAAAGAAGAATATGAAGTGCCTAATCCTACAATGCCAGAGCAAGCTTCACCCTTGCCATCTGATCATGCGGCACTTGACAGTAGAGATACAAGTACTGAGACGACTATCTTGTCCTCAAACCAGTACAATTACAAGATAGGGAGTGATAAGAACGAACAAGGATCGATGCACACCGATGGTAATTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

317

Amino Acids

35.58

Weight (kDa)

6.47

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 874
AccI GTMKAC 1 cut(s) 309
AciI CCGC 1 cut(s) 833
AclWI GGATC 1 cut(s) 934
AcsI RAATTY 1 cut(s) 621
AcuI CTGAAG 2 cut(s) 84, 262
AfaI GTAC 4 cut(s) 367, 703, 859, 890
AgsI TTSAA 5 cut(s) 65, 146, 341, 489, 580
AluBI AGCT 5 cut(s) 61, 104, 330, 344, 809
AluI AGCT 5 cut(s) 61, 104, 330, 344, 809
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 3 cut(s) 565, 652, 857
AlwI GGATC 1 cut(s) 934
AoxI GGCC 2 cut(s) 314, 594
ApeKI GCWGC 3 cut(s) 4, 7, 257
ApoI RAATTY 1 cut(s) 621
AspS9I GGNCC 1 cut(s) 374
AsuC2I CCSGG 1 cut(s) 176
AsuHPI GGTGA 4 cut(s) 251, 281, 530, 804
AvaII GGWCC 1 cut(s) 374
Bbv12I GWGCWC 1 cut(s) 174
BbvI GCAGC 2 cut(s) 19, 244
BccI CCATC 4 cut(s) 51, 116, 829, 935
BclI TGATCA 1 cut(s) 826
BcnI CCSGG 1 cut(s) 176
BcoDI GTCTC 3 cut(s) 565, 652, 857
BfaI CTAG 1 cut(s) 416
BfmI CTRYAG 2 cut(s) 5, 432
BisI GCNGC 4 cut(s) 5, 8, 258, 834
BlsI GCNGC 4 cut(s) 6, 9, 259, 835
BmcAI AGTACT 1 cut(s) 859
Bme1390I CCNGG 1 cut(s) 176
Bme18I GGWCC 1 cut(s) 374
BmgT120I GGNCC 1 cut(s) 374
BmrFI CCNGG 1 cut(s) 176
BmrI ACTGGG 1 cut(s) 738
BmsI GCATC 4 cut(s) 190, 431, 466, 921
BmuI ACTGGG 1 cut(s) 738
BpmI CTGGAG 1 cut(s) 41
BpuEI CTTGAG 1 cut(s) 170
BpuMI CCSGG 1 cut(s) 176
Bsa29I ATCGAT 1 cut(s) 929
BsaAI YACGTR 1 cut(s) 307
BsaWI WCCGGW 1 cut(s) 266
Bse1I ACTGG 3 cut(s) 317, 733, 886
BseCI ATCGAT 1 cut(s) 929
BseGI GGATG 2 cut(s) 127, 511
BseMII CTCAG 1 cut(s) 852
BseNI ACTGG 3 cut(s) 317, 733, 886
BseXI GCAGC 2 cut(s) 19, 244
BseYI CCCAGC 1 cut(s) 755
BshFI GGCC 2 cut(s) 316, 596
BshVI ATCGAT 1 cut(s) 929
BsiHKAI GWGCWC 1 cut(s) 174
BsiSI CCGG 2 cut(s) 176, 267
BsmAI GTCTC 3 cut(s) 565, 652, 857
BsmBI CGTCTC 1 cut(s) 857
BsnI GGCC 2 cut(s) 316, 596
Bsp1286I GDGCHC 1 cut(s) 174
Bsp143I GATC 4 cut(s) 491, 697, 826, 926
BspACI CCGC 1 cut(s) 833
BspANI GGCC 2 cut(s) 316, 596
BspCNI CTCAG 1 cut(s) 853
BspDI ATCGAT 1 cut(s) 929
BspHI TCATGA 1 cut(s) 681
BspMAI CTGCAG 1 cut(s) 9
BspPI GGATC 1 cut(s) 934
BsrI ACTGG 3 cut(s) 317, 733, 886
BssMI GATC 4 cut(s) 491, 697, 826, 926
BssNAI GTATAC 1 cut(s) 310
Bst1107I GTATAC 1 cut(s) 310
Bst4CI ACNGT 3 cut(s) 14, 436, 845
Bst6I CTCTTC 3 cut(s) 53, 147, 384
BstBAI YACGTR 1 cut(s) 307
BstC8I GCNNGC 1 cut(s) 807
BstDEI CTNAG 2 cut(s) 318, 861
BstF5I GGATG 2 cut(s) 127, 511
BstKTI GATC 4 cut(s) 494, 700, 829, 929
BstMAI GTCTC 3 cut(s) 565, 652, 857
BstMBI GATC 4 cut(s) 491, 697, 826, 926
BstMWI GCNNNNNNNGC 1 cut(s) 322
BstSCI CCNGG 1 cut(s) 174
BstSFI CTRYAG 2 cut(s) 5, 432
BstV1I GCAGC 2 cut(s) 19, 244
BstZ17I GTATAC 1 cut(s) 310
Bsu15I ATCGAT 1 cut(s) 929
BsuRI GGCC 2 cut(s) 316, 596
BsuTUI ATCGAT 1 cut(s) 929
BtsCI GGATG 2 cut(s) 127, 511
BtsIMutI CAGTG 1 cut(s) 441
Cac8I GCNNGC 1 cut(s) 807
CciI TCATGA 1 cut(s) 681
Cfr13I GGNCC 1 cut(s) 374
ClaI ATCGAT 1 cut(s) 929
CseI GACGC 1 cut(s) 331
Csp6I GTAC 4 cut(s) 366, 702, 858, 889
CviAII CATG 3 cut(s) 254, 682, 830
CviQI GTAC 4 cut(s) 366, 702, 858, 889
DdeI CTNAG 2 cut(s) 318, 861
DpnI GATC 4 cut(s) 493, 699, 828, 928
DpnII GATC 4 cut(s) 491, 697, 826, 926
DrdI GACNNNNNNGTC 1 cut(s) 874
DseDI GACNNNNNNGTC 1 cut(s) 874
Eam1104I CTCTTC 3 cut(s) 53, 147, 384
EarI CTCTTC 3 cut(s) 53, 147, 384
Eco147I AGGCCT 1 cut(s) 596
Eco47I GGWCC 1 cut(s) 374
Eco57I CTGAAG 2 cut(s) 84, 262
Esp3I CGTCTC 1 cut(s) 857
FaeI CATG 3 cut(s) 257, 685, 833
FalI AAGNNNNNCTT 2 cut(s) 126, 158
FatI CATG 3 cut(s) 253, 681, 829
FbaI TGATCA 1 cut(s) 826
FblI GTMKAC 1 cut(s) 309
Fnu4HI GCNGC 4 cut(s) 5, 8, 258, 834
FokI GGATG 2 cut(s) 134, 498
Fsp4HI GCNGC 4 cut(s) 5, 8, 258, 834
FspBI CTAG 1 cut(s) 416
GluI GCNGC 4 cut(s) 5, 8, 258, 834
GsaI CCCAGC 1 cut(s) 759
GsuI CTGGAG 1 cut(s) 41
HaeIII GGCC 2 cut(s) 316, 596
HapII CCGG 2 cut(s) 176, 267
HgaI GACGC 1 cut(s) 331
Hin1II CATG 3 cut(s) 257, 685, 833
HindIII AAGCTT 1 cut(s) 807
HinfI GANTC 2 cut(s) 394, 535
HpaII CCGG 2 cut(s) 176, 267
HphI GGTGA 4 cut(s) 251, 281, 530, 804
Hpy166II GTNNAC 1 cut(s) 310
Hpy188I TCNGA 3 cut(s) 475, 588, 826
Hpy188III TCNNGA 3 cut(s) 489, 515, 682
Hpy8I GTNNAC 1 cut(s) 310
HpyAV CCTTC 5 cut(s) 104, 108, 347, 355, 586
HpyCH4III ACNGT 3 cut(s) 14, 436, 845
HpyCH4IV ACGT 1 cut(s) 306
HpyCH4V TGCA 4 cut(s) 7, 260, 479, 934
HpyF10VI GCNNNNNNNGC 1 cut(s) 322
HpyF3I CTNAG 2 cut(s) 318, 861
HpySE526I ACGT 1 cut(s) 306
Hsp92II CATG 3 cut(s) 257, 685, 833
Ksp22I TGATCA 1 cut(s) 826
Kzo9I GATC 4 cut(s) 491, 697, 826, 926
LmnI GCTCC 2 cut(s) 169, 419
Lsp1109I GCAGC 2 cut(s) 19, 244
LweI GCATC 4 cut(s) 190, 431, 466, 921
MaeI CTAG 1 cut(s) 416
MaeII ACGT 1 cut(s) 306
MaeIII GTNAC 2 cut(s) 441, 457
MalI GATC 4 cut(s) 493, 699, 828, 928
MboI GATC 4 cut(s) 491, 697, 826, 926
MboII GAAGA 8 cut(s) 40, 77, 80, 134, 223, 242, 401, 782
MhlI GDGCHC 1 cut(s) 174
MluCI AATT 8 cut(s) 21, 155, 164, 553, 621, 689, 892, 946
MnlI CCTC 9 cut(s) 65, 112, 282, 344, 400, 432, 511, 558, 889
MseI TTAA 2 cut(s) 24, 161
MslI CAYNNNNRTG 1 cut(s) 939
MspI CCGG 2 cut(s) 176, 267
MspR9I CCNGG 1 cut(s) 176
MwoI GCNNNNNNNGC 1 cut(s) 322
NciI CCSGG 1 cut(s) 176
NdeII GATC 4 cut(s) 491, 697, 826, 926
NlaIII CATG 3 cut(s) 257, 685, 833
NmuCI GTSAC 1 cut(s) 441
PagI TCATGA 1 cut(s) 681
PceI AGGCCT 1 cut(s) 596
PfeI GAWTC 2 cut(s) 394, 535
PkrI GCNGC 4 cut(s) 6, 9, 259, 835
Ppu21I YACGTR 1 cut(s) 307
PspFI CCCAGC 1 cut(s) 755
PspPI GGNCC 1 cut(s) 374
PstI CTGCAG 1 cut(s) 9
RsaI GTAC 4 cut(s) 367, 703, 859, 890
RsaNI GTAC 4 cut(s) 366, 702, 858, 889
RseI CAYNNNNRTG 1 cut(s) 939
SaqAI TTAA 2 cut(s) 24, 161
SatI GCNGC 4 cut(s) 5, 8, 258, 834
Sau3AI GATC 4 cut(s) 491, 697, 826, 926
Sau96I GGNCC 1 cut(s) 374
ScaI AGTACT 1 cut(s) 859
ScrFI CCNGG 1 cut(s) 176
SduI GDGCHC 1 cut(s) 174
SfaNI GCATC 4 cut(s) 190, 431, 466, 921
SfcI CTRYAG 2 cut(s) 5, 432
SinI GGWCC 1 cut(s) 374
SmiMI CAYNNNNRTG 1 cut(s) 939
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 8 cut(s) 21, 155, 164, 553, 621, 689, 892, 946
SseBI AGGCCT 1 cut(s) 596
SsiI CCGC 1 cut(s) 833
SspMI CTAG 1 cut(s) 416
StuI AGGCCT 1 cut(s) 596
StyD4I CCNGG 1 cut(s) 174
TaaI ACNGT 3 cut(s) 14, 436, 845
TaiI ACGT 1 cut(s) 309
TaqI TCGA 2 cut(s) 721, 929
TasI AATT 8 cut(s) 21, 155, 164, 553, 621, 689, 892, 946
TatI WGTACW 2 cut(s) 857, 888
TauI GCSGC 1 cut(s) 836
TfiI GAWTC 2 cut(s) 394, 535
Tru1I TTAA 2 cut(s) 24, 161
Tru9I TTAA 2 cut(s) 24, 161
TscAI CASTG 1 cut(s) 441
TseFI GTSAC 1 cut(s) 441
TseI GCWGC 3 cut(s) 4, 7, 257
Tsp45I GTSAC 1 cut(s) 441
TspDTI ATGAA 7 cut(s) 93, 242, 402, 605, 698, 702, 792
TspRI CASTG 1 cut(s) 441
VpaK11BI GGWCC 1 cut(s) 374
XapI RAATTY 1 cut(s) 621
XmiI GTMKAC 1 cut(s) 309
XspI CTAG 1 cut(s) 416
ZrmI AGTACT 1 cut(s) 859
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.