Rh5AG273600

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0001790
Physical Location & Seq
Reverse (-)
36629292 .. 36629853
562 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG273600.1

Sequence Viewer

Length: 351 bp
ATGATTATTACTAATGTTGCTTTAACTTTATGGGCAAATCAGGTCATGAATGAATTGGTTCACCGTACTCCTTCATACAAATATCGAAATACTGGGCAAAATCCCCAAGAAACTCAACCGAGCAAAGATAAAGAAGAATATGAAGTGCCTAATCCTGCAATGCTAGAGCAAGCTTTACCCTTATCATCTGATCATGCGGCACTTAGCAGTAGAGATACAAATATTAAGACGACTACCTTGTCCTCAAAGCAGTACAATTTTAAGATAGGGAGTGATCAGAATGAACCAGGGAAGAAAAACTGCAAAGAAAGGGCTTACAGGAGTGATTACTTCTGTGAGCGATGCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

116

Amino Acids

13.32

Weight (kDa)

7.69

Isoelectric Point (pI)

29.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 238
AciI CCGC 1 cut(s) 197
AfaI GTAC 2 cut(s) 67, 254
AjnI CCWGG 1 cut(s) 286
AluBI AGCT 1 cut(s) 173
AluI AGCT 1 cut(s) 173
Asp700I GAANNNNTTC 1 cut(s) 57
AsuHPI GGTGA 1 cut(s) 53
BciT130I CCWGG 1 cut(s) 288
BclI TGATCA 2 cut(s) 190, 274
BfaI CTAG 1 cut(s) 164
BisI GCNGC 1 cut(s) 198
BlsI GCNGC 1 cut(s) 199
Bme1390I CCNGG 1 cut(s) 288
BmrFI CCNGG 1 cut(s) 288
BmrI ACTGGG 1 cut(s) 102
BmsI GCATC 1 cut(s) 332
BmuI ACTGGG 1 cut(s) 102
BsaJI CCNNGG 1 cut(s) 287
Bse1I ACTGG 1 cut(s) 97
Bse3DI GCAATG 1 cut(s) 165
BseBI CCWGG 1 cut(s) 288
BseDI CCNNGG 1 cut(s) 287
BseMI GCAATG 1 cut(s) 165
BseNI ACTGG 1 cut(s) 97
Bsp143I GATC 2 cut(s) 190, 274
BspACI CCGC 1 cut(s) 197
BspHI TCATGA 1 cut(s) 45
BsrDI GCAATG 1 cut(s) 165
BsrI ACTGG 1 cut(s) 97
BssECI CCNNGG 1 cut(s) 287
BssMI GATC 2 cut(s) 190, 274
Bst2UI CCWGG 1 cut(s) 288
Bst4CI ACNGT 1 cut(s) 65
BstC8I GCNNGC 1 cut(s) 171
BstDEI CTNAG 1 cut(s) 203
BstKTI GATC 2 cut(s) 193, 277
BstMBI GATC 2 cut(s) 190, 274
BstNI CCWGG 1 cut(s) 288
BstSCI CCNGG 1 cut(s) 286
Cac8I GCNNGC 1 cut(s) 171
CciI TCATGA 1 cut(s) 45
Csp6I GTAC 2 cut(s) 66, 253
CviAII CATG 2 cut(s) 46, 194
CviJI RGCY 2 cut(s) 173, 314
CviKI_1 RGCY 2 cut(s) 173, 314
CviQI GTAC 2 cut(s) 66, 253
DdeI CTNAG 1 cut(s) 203
DpnI GATC 2 cut(s) 192, 276
DpnII GATC 2 cut(s) 190, 274
DrdI GACNNNNNNGTC 1 cut(s) 238
DseDI GACNNNNNNGTC 1 cut(s) 238
EcoRII CCWGG 1 cut(s) 286
FaeI CATG 2 cut(s) 49, 197
FaiI YATR 5 cut(s) 31, 47, 76, 141, 195
FatI CATG 2 cut(s) 45, 193
FbaI TGATCA 2 cut(s) 190, 274
Fnu4HI GCNGC 1 cut(s) 198
Fsp4HI GCNGC 1 cut(s) 198
FspBI CTAG 1 cut(s) 164
GluI GCNGC 1 cut(s) 198
Hin1II CATG 2 cut(s) 49, 197
HindIII AAGCTT 1 cut(s) 171
HphI GGTGA 1 cut(s) 53
Hpy166II GTNNAC 1 cut(s) 61
Hpy188I TCNGA 2 cut(s) 190, 279
Hpy188III TCNNGA 1 cut(s) 46
Hpy8I GTNNAC 1 cut(s) 61
HpyAV CCTTC 1 cut(s) 81
HpyCH4III ACNGT 1 cut(s) 65
HpyCH4V TGCA 3 cut(s) 158, 303, 345
HpyF3I CTNAG 1 cut(s) 203
Hsp92II CATG 2 cut(s) 49, 197
Ksp22I TGATCA 2 cut(s) 190, 274
Kzo9I GATC 2 cut(s) 190, 274
LpnPI CCDG 6 cut(s) 26, 78, 168, 273, 300, 304
LweI GCATC 1 cut(s) 332
MaeI CTAG 1 cut(s) 164
MalI GATC 2 cut(s) 192, 276
MboI GATC 2 cut(s) 190, 274
MboII GAAGA 2 cut(s) 146, 304
MfeI CAATTG 1 cut(s) 346
MluCI AATT 3 cut(s) 53, 256, 346
MnlI CCTC 1 cut(s) 253
MroXI GAANNNNTTC 1 cut(s) 57
MseI TTAA 3 cut(s) 23, 225, 261
MspR9I CCNGG 1 cut(s) 288
MunI CAATTG 1 cut(s) 346
MvaI CCWGG 1 cut(s) 288
NdeII GATC 2 cut(s) 190, 274
NlaIII CATG 2 cut(s) 49, 197
PagI TCATGA 1 cut(s) 45
PdmI GAANNNNTTC 1 cut(s) 57
PkrI GCNGC 1 cut(s) 199
Psp6I CCWGG 1 cut(s) 286
PspGI CCWGG 1 cut(s) 286
RsaI GTAC 2 cut(s) 67, 254
RsaNI GTAC 2 cut(s) 66, 253
SaqAI TTAA 3 cut(s) 23, 225, 261
SatI GCNGC 1 cut(s) 198
Sau3AI GATC 2 cut(s) 190, 274
ScrFI CCNGG 1 cut(s) 288
SetI ASST 3 cut(s) 45, 175, 239
SfaNI GCATC 1 cut(s) 332
Sse9I AATT 3 cut(s) 53, 256, 346
SsiI CCGC 1 cut(s) 197
SspI AATATT 1 cut(s) 223
SspMI CTAG 1 cut(s) 164
StyD4I CCNGG 1 cut(s) 286
TaaI ACNGT 1 cut(s) 65
TaqI TCGA 1 cut(s) 85
TasI AATT 3 cut(s) 53, 256, 346
TatI WGTACW 1 cut(s) 252
TauI GCSGC 1 cut(s) 200
Tru1I TTAA 3 cut(s) 23, 225, 261
Tru9I TTAA 3 cut(s) 23, 225, 261
TspDTI ATGAA 5 cut(s) 62, 63, 66, 156, 297
XmnI GAANNNNTTC 1 cut(s) 57
XspI CTAG 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.