Rh6CG333900

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0001790
Physical Location & Seq
Reverse (-)
52232025 .. 52232843
819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG333900.1

Sequence Viewer

Length: 642 bp
ATGGACGAACTACTAAAAAGTGCTTCCATGTATTCATATGAATATGAAGACAGTGGTATGAACCCATATGCAGCACCAATATCGTCCGATGAAACAAGGCCGTACAACATTTCCCATAGTGGCGTTCACATAGCCCATGAAAGCATTGAAGGAGAACTAATGACTCCCAGGAGGATGACCAAGGAGGAAACACCCATATTGATTGCTGCTAAGAATGGTGTGATTGAAATGGTGGAACGAATCCTTGAATTATTCCCAACGGCCATCCACGACGTTGACTCAAAGGAAAAGATTCAAAAGAATATTGTCTTGTTGGCTGTGGAGAACAAGCAAACCAATCTGTACCAACTGTTACGAAACAGCGGTCGTCTGATGAAAGATAGGGAGTTCGGTAAAGTGGATATTGATTGGAATAGTGCGTTACATCTCGCCGCGAGGTTGGGAAACAGTAAACCTTGGCTAATTGTTGGCCCTGCCCTGCAGATGCAATGGGAAGTGAAATGGTTTGAGGTACGTACTTGGTTCAGGATCCGGAATTCCGGATATTTATTTTCTAACGAACAATTAGCAAACAACAACAAAGATAAGCATGTCTTGAAGAATTGTTTCACCAAATACTATCATGCTGATAAGATTGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

213

Amino Acids

24.66

Weight (kDa)

6.66

Isoelectric Point (pI)

34.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 434
AccIII TCCGGA 2 cut(s) 531, 539
AciI CCGC 2 cut(s) 363, 432
AclWI GGATC 2 cut(s) 523, 536
AcoI YGGCCR 1 cut(s) 261
AcsI RAATTY 1 cut(s) 535
AfaI GTAC 4 cut(s) 104, 344, 513, 517
AgsI TTSAA 5 cut(s) 149, 227, 248, 296, 598
AjnI CCWGG 1 cut(s) 167
AlwI GGATC 2 cut(s) 523, 536
Aor13HI TCCGGA 2 cut(s) 531, 539
AoxI GGCC 3 cut(s) 98, 261, 469
ApeKI GCWGC 2 cut(s) 71, 206
ApoI RAATTY 1 cut(s) 535
ArsI GACNNNNNNTTYG 2 cut(s) 349, 381
Asp700I GAANNNNTTC 2 cut(s) 291, 605
AspS9I GGNCC 1 cut(s) 470
AsuHPI GGTGA 1 cut(s) 601
BamHI GGATCC 1 cut(s) 528
BbsI GAAGAC 1 cut(s) 54
BbvI GCAGC 2 cut(s) 83, 193
BccI CCATC 1 cut(s) 272
BceAI ACGGC 2 cut(s) 85, 276
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BciT130I CCWGG 1 cut(s) 169
BfmI CTRYAG 1 cut(s) 479
BisI GCNGC 3 cut(s) 72, 207, 432
BlsI GCNGC 3 cut(s) 73, 208, 433
Bme1390I CCNGG 1 cut(s) 169
BmgT120I GGNCC 1 cut(s) 470
BmiI GGNNCC 1 cut(s) 530
BmrFI CCNGG 1 cut(s) 169
BmsI GCATC 1 cut(s) 474
BpiI GAAGAC 1 cut(s) 54
BsaAI YACGTR 1 cut(s) 515
BsaJI CCNNGG 3 cut(s) 167, 180, 455
BsaWI WCCGGW 2 cut(s) 531, 539
Bse3DI GCAATG 1 cut(s) 494
BseAI TCCGGA 2 cut(s) 531, 539
BseBI CCWGG 1 cut(s) 169
BseDI CCNNGG 3 cut(s) 167, 180, 455
BseGI GGATG 2 cut(s) 180, 264
BseMI GCAATG 1 cut(s) 494
BseXI GCAGC 2 cut(s) 83, 193
Bsh1236I CGCG 1 cut(s) 434
Bsh1285I CGRYCG 1 cut(s) 367
BshFI GGCC 3 cut(s) 100, 263, 471
BsiEI CGRYCG 1 cut(s) 367
BsiSI CCGG 2 cut(s) 532, 540
BsnI GGCC 3 cut(s) 100, 263, 471
Bsp13I TCCGGA 2 cut(s) 531, 539
Bsp143I GATC 1 cut(s) 528
BspACI CCGC 2 cut(s) 363, 432
BspANI GGCC 3 cut(s) 100, 263, 471
BspEI TCCGGA 2 cut(s) 531, 539
BspFNI CGCG 1 cut(s) 434
BspLI GGNNCC 1 cut(s) 530
BspMAI CTGCAG 1 cut(s) 483
BspPI GGATC 2 cut(s) 523, 536
BsrDI GCAATG 1 cut(s) 494
BssECI CCNNGG 3 cut(s) 167, 180, 455
BssMI GATC 1 cut(s) 528
BssT1I CCWWGG 2 cut(s) 180, 455
Bst2UI CCWGG 1 cut(s) 169
Bst4CI ACNGT 3 cut(s) 53, 351, 449
BstBAI YACGTR 1 cut(s) 515
BstDEI CTNAG 1 cut(s) 210
BstF5I GGATG 2 cut(s) 180, 264
BstFNI CGCG 1 cut(s) 434
BstKTI GATC 1 cut(s) 531
BstMBI GATC 1 cut(s) 528
BstMCI CGRYCG 1 cut(s) 367
BstNI CCWGG 1 cut(s) 169
BstNSI RCATGY 1 cut(s) 593
BstSCI CCNGG 1 cut(s) 167
BstSFI CTRYAG 1 cut(s) 479
BstSNI TACGTA 1 cut(s) 515
BstUI CGCG 1 cut(s) 434
BstV1I GCAGC 2 cut(s) 83, 193
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 1 cut(s) 528
BstYI RGATCY 1 cut(s) 528
BsuRI GGCC 3 cut(s) 100, 263, 471
BtsCI GGATG 2 cut(s) 180, 264
BtsIMutI CAGTG 1 cut(s) 58
Cfr13I GGNCC 1 cut(s) 470
Csp6I GTAC 4 cut(s) 103, 343, 512, 516
CviAII CATG 4 cut(s) 28, 137, 590, 623
CviJI RGCY 6 cut(s) 100, 134, 263, 317, 460, 471
CviKI_1 RGCY 6 cut(s) 100, 134, 263, 317, 460, 471
CviQI GTAC 4 cut(s) 103, 343, 512, 516
DdeI CTNAG 1 cut(s) 210
DpnI GATC 1 cut(s) 530
DpnII GATC 1 cut(s) 528
EaeI YGGCCR 1 cut(s) 261
Eco105I TACGTA 1 cut(s) 515
Eco130I CCWWGG 2 cut(s) 180, 455
EcoRI GAATTC 1 cut(s) 535
EcoRII CCWGG 1 cut(s) 167
EcoT14I CCWWGG 2 cut(s) 180, 455
ErhI CCWWGG 2 cut(s) 180, 455
FaeI CATG 4 cut(s) 31, 140, 593, 626
FalI AAGNNNNNCTT 2 cut(s) 578, 610
FatI CATG 4 cut(s) 27, 136, 589, 622
FauNDI CATATG 2 cut(s) 37, 67
Fnu4HI GCNGC 3 cut(s) 72, 207, 432
FokI GGATG 2 cut(s) 187, 251
Fsp4HI GCNGC 3 cut(s) 72, 207, 432
GluI GCNGC 3 cut(s) 72, 207, 432
HaeIII GGCC 3 cut(s) 100, 263, 471
HapII CCGG 2 cut(s) 532, 540
Hin1II CATG 4 cut(s) 31, 140, 593, 626
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HinfI GANTC 4 cut(s) 163, 240, 278, 292
HpaII CCGG 2 cut(s) 532, 540
HphI GGTGA 1 cut(s) 601
Hpy166II GTNNAC 3 cut(s) 127, 277, 452
Hpy188I TCNGA 2 cut(s) 88, 372
Hpy188III TCNNGA 4 cut(s) 526, 532, 540, 595
Hpy8I GTNNAC 3 cut(s) 127, 277, 452
Hpy99I CGWCG 1 cut(s) 275
HpyAV CCTTC 1 cut(s) 143
HpyCH4III ACNGT 3 cut(s) 53, 351, 449
HpyCH4IV ACGT 2 cut(s) 273, 514
HpyCH4V TGCA 3 cut(s) 71, 481, 487
HpyF3I CTNAG 1 cut(s) 210
HpySE526I ACGT 2 cut(s) 273, 514
Hsp92II CATG 4 cut(s) 31, 140, 593, 626
Kpn2I TCCGGA 2 cut(s) 531, 539
Kzo9I GATC 1 cut(s) 528
LpnPI CCDG 7 cut(s) 154, 181, 486, 491, 511, 545, 553
Lsp1109I GCAGC 2 cut(s) 83, 193
LweI GCATC 1 cut(s) 474
MaeII ACGT 2 cut(s) 273, 514
MaeIII GTNAC 2 cut(s) 351, 420
MalI GATC 1 cut(s) 530
MboI GATC 1 cut(s) 528
MboII GAAGA 2 cut(s) 59, 610
MflI RGATCY 1 cut(s) 528
MluCI AATT 5 cut(s) 248, 462, 535, 563, 601
MlyI GAGTC 2 cut(s) 157, 272
MnlI CCTC 4 cut(s) 165, 178, 429, 502
MroI TCCGGA 2 cut(s) 531, 539
MroXI GAANNNNTTC 2 cut(s) 291, 605
MspA1I CMGCKG 1 cut(s) 363
MspI CCGG 2 cut(s) 532, 540
MspR9I CCNGG 1 cut(s) 169
MvaI CCWGG 1 cut(s) 169
MvnI CGCG 1 cut(s) 434
NdeI CATATG 2 cut(s) 37, 67
NdeII GATC 1 cut(s) 528
NlaIII CATG 4 cut(s) 31, 140, 593, 626
NlaIV GGNNCC 1 cut(s) 530
NspI RCATGY 1 cut(s) 593
PdmI GAANNNNTTC 2 cut(s) 291, 605
PfeI GAWTC 2 cut(s) 240, 292
PkrI GCNGC 3 cut(s) 73, 208, 433
PleI GAGTC 2 cut(s) 157, 272
PpsI GAGTC 2 cut(s) 157, 272
Ppu21I YACGTR 1 cut(s) 515
Psp6I CCWGG 1 cut(s) 167
PspGI CCWGG 1 cut(s) 167
PspN4I GGNNCC 1 cut(s) 530
PspPI GGNCC 1 cut(s) 470
PstI CTGCAG 1 cut(s) 483
PsuI RGATCY 1 cut(s) 528
RsaI GTAC 4 cut(s) 104, 344, 513, 517
RsaNI GTAC 4 cut(s) 103, 343, 512, 516
SatI GCNGC 3 cut(s) 72, 207, 432
Sau3AI GATC 1 cut(s) 528
Sau96I GGNCC 1 cut(s) 470
SchI GAGTC 2 cut(s) 157, 272
ScrFI CCNGG 1 cut(s) 169
SetI ASST 5 cut(s) 276, 440, 457, 513, 517
SfaNI GCATC 1 cut(s) 474
SfcI CTRYAG 1 cut(s) 479
SnaBI TACGTA 1 cut(s) 515
Sse9I AATT 5 cut(s) 248, 462, 535, 563, 601
SsiI CCGC 2 cut(s) 363, 432
SspI AATATT 1 cut(s) 304
StyD4I CCNGG 1 cut(s) 167
StyI CCWWGG 2 cut(s) 180, 455
TaaI ACNGT 3 cut(s) 53, 351, 449
TaiI ACGT 2 cut(s) 276, 517
TasI AATT 5 cut(s) 248, 462, 535, 563, 601
TauI GCSGC 1 cut(s) 434
TfiI GAWTC 2 cut(s) 240, 292
TscAI CASTG 1 cut(s) 58
TseI GCWGC 2 cut(s) 71, 206
TspDTI ATGAA 7 cut(s) 24, 54, 60, 74, 105, 153, 389
TspRI CASTG 1 cut(s) 58
XapI RAATTY 1 cut(s) 535
XceI RCATGY 1 cut(s) 593
XmnI GAANNNNTTC 2 cut(s) 291, 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.