pycom03g20490

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0001790
Physical Location & Seq
Reverse (-)
20993649 .. 20999451
5803 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g20490.2

Sequence Viewer

Length: 213 bp
ATGGTGACCCACCGTAACAACCCTAATAGGTCAAAATCCACTGTTGATCAAGGTCAAGGAGACCAAAAGATTCCCGTAAACTACAACACCTGCTCTGAGTTTTTGAAGCTTTTATCAAAGGAAATGCTGCTTGCTCCTGGCTTAGTAAAGTTGAAAAAGCGCTTTTGTTATACATCAAATGGCTTGATAATTTCTAGGGTCCTCAGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

71

Amino Acids

7.94

Weight (kDa)

10.11

Isoelectric Point (pI)

21.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 98
Acc36I ACCTGC 1 cut(s) 98
AfeI AGCGCT 1 cut(s) 161
AgsI TTSAA 2 cut(s) 106, 154
AjnI CCWGG 1 cut(s) 136
AluBI AGCT 1 cut(s) 109
AluI AGCT 1 cut(s) 109
Alw26I GTCTC 1 cut(s) 54
Aor51HI AGCGCT 1 cut(s) 161
ApeKI GCWGC 1 cut(s) 127
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 1 cut(s) 199
AsuHPI GGTGA 1 cut(s) 16
AvaII GGWCC 1 cut(s) 199
BbvCI CCTCAGC 1 cut(s) 203
BbvI GCAGC 1 cut(s) 114
BciT130I CCWGG 1 cut(s) 138
BclI TGATCA 1 cut(s) 46
BcoDI GTCTC 1 cut(s) 54
BfaI CTAG 1 cut(s) 195
BfoI RGCGCY 1 cut(s) 163
BfuAI ACCTGC 1 cut(s) 98
BisI GCNGC 1 cut(s) 128
BlsI GCNGC 1 cut(s) 129
Bme1390I CCNGG 1 cut(s) 138
Bme18I GGWCC 1 cut(s) 199
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 1 cut(s) 200
BmrFI CCNGG 1 cut(s) 138
Bpu10I CCTNAGC 1 cut(s) 203
BsaI GGTCTC 1 cut(s) 54
BseBI CCWGG 1 cut(s) 138
BseMII CTCAG 1 cut(s) 87
BseXI GCAGC 1 cut(s) 114
BsmAI GTCTC 1 cut(s) 54
Bso31I GGTCTC 1 cut(s) 54
Bsp143I GATC 1 cut(s) 46
BspCNI CTCAG 1 cut(s) 88
BspLI GGNNCC 1 cut(s) 200
BspMI ACCTGC 1 cut(s) 98
BspTNI GGTCTC 1 cut(s) 54
BssMI GATC 1 cut(s) 46
Bst2UI CCWGG 1 cut(s) 138
Bst4CI ACNGT 2 cut(s) 14, 43
BstC8I GCNNGC 1 cut(s) 132
BstDEI CTNAG 3 cut(s) 96, 142, 203
BstEII GGTNACC 1 cut(s) 4
BstH2I RGCGCY 1 cut(s) 163
BstHHI GCGC 1 cut(s) 162
BstKTI GATC 1 cut(s) 49
BstMAI GTCTC 1 cut(s) 54
BstMBI GATC 1 cut(s) 46
BstNI CCWGG 1 cut(s) 138
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 1 cut(s) 136
BstV1I GCAGC 1 cut(s) 114
BtsIMutI CAGTG 1 cut(s) 39
BveI ACCTGC 1 cut(s) 98
Cac8I GCNNGC 1 cut(s) 132
CfoI GCGC 1 cut(s) 162
Cfr13I GGNCC 1 cut(s) 199
CviJI RGCY 3 cut(s) 109, 141, 183
CviKI_1 RGCY 3 cut(s) 109, 141, 183
DdeI CTNAG 3 cut(s) 96, 142, 203
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
Eco31I GGTCTC 1 cut(s) 54
Eco47I GGWCC 1 cut(s) 199
Eco47III AGCGCT 1 cut(s) 161
Eco91I GGTNACC 1 cut(s) 4
EcoO109I RGGNCCY 1 cut(s) 199
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 136
FaiI YATR 1 cut(s) 171
FbaI TGATCA 1 cut(s) 46
Fnu4HI GCNGC 1 cut(s) 128
Fsp4HI GCNGC 1 cut(s) 128
FspBI CTAG 1 cut(s) 195
GlaI GCGC 1 cut(s) 161
GluI GCNGC 1 cut(s) 128
HaeII RGCGCY 1 cut(s) 163
HhaI GCGC 1 cut(s) 162
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 1 cut(s) 70
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 79
Hpy188I TCNGA 1 cut(s) 97
Hpy8I GTNNAC 1 cut(s) 79
HpyCH4III ACNGT 2 cut(s) 14, 43
HpyF3I CTNAG 3 cut(s) 96, 142, 203
HspAI GCGC 1 cut(s) 160
Ksp22I TGATCA 1 cut(s) 46
Kzo9I GATC 1 cut(s) 46
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 3 cut(s) 103, 123, 150
Lsp1109I GCAGC 1 cut(s) 114
MaeI CTAG 1 cut(s) 195
MaeIII GTNAC 2 cut(s) 4, 14
MalI GATC 1 cut(s) 48
MboI GATC 1 cut(s) 46
MluCI AATT 1 cut(s) 189
MnlI CCTC 1 cut(s) 212
MspR9I CCNGG 1 cut(s) 138
MvaI CCWGG 1 cut(s) 138
NdeII GATC 1 cut(s) 46
NlaIV GGNNCC 1 cut(s) 200
NmuCI GTSAC 1 cut(s) 4
PaqCI CACCTGC 1 cut(s) 98
PfeI GAWTC 1 cut(s) 70
PkrI GCNGC 1 cut(s) 129
PpuMI RGGWCCY 1 cut(s) 199
Psp5II RGGWCCY 1 cut(s) 199
Psp6I CCWGG 1 cut(s) 136
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 1 cut(s) 136
PspN4I GGNNCC 1 cut(s) 200
PspPI GGNCC 1 cut(s) 199
PspPPI RGGWCCY 1 cut(s) 199
SatI GCNGC 1 cut(s) 128
Sau3AI GATC 1 cut(s) 46
Sau96I GGNCC 1 cut(s) 199
ScrFI CCNGG 1 cut(s) 138
SetI ASST 4 cut(s) 32, 55, 92, 111
SgeI CNNG 9 cut(s) 62, 68, 86, 102, 143, 149, 150, 196, 207
SinI GGWCC 1 cut(s) 199
Sse9I AATT 1 cut(s) 189
SspMI CTAG 1 cut(s) 195
StyD4I CCNGG 1 cut(s) 136
TaaI ACNGT 2 cut(s) 14, 43
TasI AATT 1 cut(s) 189
TfiI GAWTC 1 cut(s) 70
TscAI CASTG 1 cut(s) 46
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 1 cut(s) 127
Tsp45I GTSAC 1 cut(s) 4
TspRI CASTG 1 cut(s) 46
VpaK11BI GGWCC 1 cut(s) 199
XspI CTAG 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.