Rmu_sc0000808.1_g000058

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000808.1
OG0001790
Physical Location & Seq
Forward (+)
269659 .. 271634
1976 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000808.1_g000058.1.cds

Sequence Viewer

Length: 1230 bp
atggcttcagatgaggaaatagatagcttgttcgaatacgcaatgaaaggacaatgggaaaaggtcatggaggcctacaaaaatagtattacggctcaagtagccaagataaccagatccaaggagactgctctgcacatagctatagcagatgaccgaaccgaaatcgcactagacttggtgagcattattctcagtaaaggagatgacaatgcaacaaccgcagtactcagcatagcaaatgatagaggcaacacgcctctacatctagctgcttggctcgggaatgtacaagtgtgccacagcattgcagccaagggggggagcctcgtctcggttcgaaatgtggagggtgagacacctctcttcttggcagctcttaatggtaacacaaaggcttttctttgccttcatctccattgccaagaaaaaccccattcctctatcagagacaacaatggtgataccatccttcacgctgcaatctccggtgaatacttcagtggaaccgaagcctgcacccgaaatgggttctcggttcggttcgggttaaatgctttgaacccgaatgggttctccgtcactttggtcatttggtttcgattttttttgaacatctgtattcaacttcgatctccacaaatcgaagaaggcctgggatgggtgagaagtccggttggttcagaaataggtggaaccgaaacaaaacccgaacgggtctacggttcggttcgggtttcacgtcgtgaaaaatgtgaaaccgatataattcggttgtacccagaacttgtgaactctatcaatcaaaatggtttgtctccgctgcatgttctagctagtaagcccaatgcattcaaaagcagctgtcgacttggactctgtgatcttcttatatacaaatgtttgatggttgaagaactcaaagaggaagaatttaaccatgaagcgtgtctttctaaggcaggagacggagacagttcttcatacccagaaaactacgaaacatgcatgaacttcttccaagttttcagaagtttgtttcaagtgttaagtaaaaagaggggagataagaactgtatgcaagcgtggcacgaatactggcgtaagaagcacagctccctctttcaagctaatggaggaaatggaaagggtactaatggtcctgccgacgacgaagagaatccgcaaaaaggtataacctcttctggaaacctttcgatgttgatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

409

Amino Acids

45.18

Weight (kDa)

6.04

Isoelectric Point (pI)

38.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 720, 868
AciI CCGC 3 cut(s) 222, 821, 1184
AclWI GGATC 1 cut(s) 111
AcsI RAATTY 1 cut(s) 932
AcuI CTGAAG 1 cut(s) 484
AdeI CACNNNGTG 1 cut(s) 746
AfaI GTAC 4 cut(s) 228, 291, 779, 1153
AfiI CCNNNNNNNGG 5 cut(s) 321, 334, 528, 661, 1190
AgsI TTSAA 7 cut(s) 562, 613, 626, 856, 914, 1043, 1127
AjiI CACGTC 1 cut(s) 743
AjnI CCWGG 1 cut(s) 654
AluBI AGCT 8 cut(s) 27, 143, 272, 377, 836, 864, 1116, 1130
AluI AGCT 8 cut(s) 27, 143, 272, 377, 836, 864, 1116, 1130
Alw26I GTCTC 7 cut(s) 119, 337, 350, 444, 822, 960, 966
AlwI GGATC 1 cut(s) 111
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 2 cut(s) 72, 652
ApeKI GCWGC 6 cut(s) 272, 311, 374, 479, 823, 861
ApoI RAATTY 1 cut(s) 932
Asp700I GAANNNNTTC 3 cut(s) 572, 1016, 1213
AspS9I GGNCC 1 cut(s) 1160
AsuHPI GGTGA 5 cut(s) 193, 365, 473, 503, 676
AsuII TTCGAA 2 cut(s) 33, 340
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 1 cut(s) 1160
BarI GAAGNNNNNNTAC 2 cut(s) 1186, 1218
BbvI GCAGC 6 cut(s) 259, 323, 386, 466, 810, 873
BccI CCATC 3 cut(s) 476, 654, 901
BceAI ACGGC 1 cut(s) 108
BciT130I CCWGG 1 cut(s) 656
BcoDI GTCTC 7 cut(s) 119, 337, 350, 444, 822, 960, 966
BfaI CTAG 4 cut(s) 173, 269, 833, 837
BfmI CTRYAG 1 cut(s) 144
BisI GCNGC 6 cut(s) 273, 312, 375, 480, 824, 862
BlsI GCNGC 6 cut(s) 274, 313, 376, 481, 825, 863
BmcAI AGTACT 1 cut(s) 228
Bme1390I CCNGG 1 cut(s) 656
Bme18I GGWCC 1 cut(s) 1160
BmeT110I CYCGRG 1 cut(s) 281
BmgBI CACGTC 1 cut(s) 743
BmgT120I GGNCC 1 cut(s) 1160
BmiI GGNNCC 3 cut(s) 326, 508, 697
BmrFI CCNGG 1 cut(s) 656
Bpu14I TTCGAA 2 cut(s) 33, 340
BpuEI CTTGAG 1 cut(s) 81
BsaJI CCNNGG 3 cut(s) 120, 315, 655
BsaWI WCCGGW 2 cut(s) 488, 673
Bsc4I CCNNNNNNNGG 5 cut(s) 321, 334, 528, 661, 1190
Bse1I ACTGG 1 cut(s) 1103
Bse3DI GCAATG 3 cut(s) 48, 306, 418
BseBI CCWGG 1 cut(s) 656
BseDI CCNNGG 3 cut(s) 120, 315, 655
BseGI GGATG 2 cut(s) 468, 665
BseLI CCNNNNNNNGG 5 cut(s) 321, 334, 528, 661, 1190
BseMI GCAATG 3 cut(s) 48, 306, 418
BseMII CTCAG 2 cut(s) 208, 244
BseNI ACTGG 1 cut(s) 1103
BseXI GCAGC 6 cut(s) 259, 323, 386, 466, 810, 873
BsgI GTGCAG 2 cut(s) 119, 502
BshFI GGCC 2 cut(s) 74, 654
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 2 cut(s) 489, 674
BslI CCNNNNNNNGG 5 cut(s) 321, 334, 528, 661, 1190
BsmAI GTCTC 7 cut(s) 119, 337, 350, 444, 822, 960, 966
BsmBI CGTCTC 2 cut(s) 337, 960
BsmI GAATGC 1 cut(s) 851
BsnI GGCC 2 cut(s) 74, 654
BsoBI CYCGRG 1 cut(s) 281
Bsp119I TTCGAA 2 cut(s) 33, 340
Bsp1407I TGTACA 1 cut(s) 289
Bsp143I GATC 3 cut(s) 116, 632, 883
BspACI CCGC 3 cut(s) 222, 821, 1184
BspANI GGCC 2 cut(s) 74, 654
BspCNI CTCAG 2 cut(s) 207, 243
BspLI GGNNCC 3 cut(s) 326, 508, 697
BspPI GGATC 1 cut(s) 111
BspT104I TTCGAA 2 cut(s) 33, 340
BsrDI GCAATG 3 cut(s) 48, 306, 418
BsrGI TGTACA 1 cut(s) 289
BsrI ACTGG 1 cut(s) 1103
BssECI CCNNGG 3 cut(s) 120, 315, 655
BssMI GATC 3 cut(s) 116, 632, 883
BssT1I CCWWGG 2 cut(s) 120, 315
Bst2UI CCWGG 1 cut(s) 656
Bst4CI ACNGT 3 cut(s) 725, 977, 1076
Bst6I CTCTTC 3 cut(s) 371, 1170, 1207
BstAUI TGTACA 1 cut(s) 289
BstBI TTCGAA 2 cut(s) 33, 340
BstC8I GCNNGC 2 cut(s) 517, 1083
BstDEI CTNAG 3 cut(s) 194, 230, 957
BstF5I GGATG 2 cut(s) 468, 665
BstKTI GATC 3 cut(s) 119, 635, 886
BstMAI GTCTC 7 cut(s) 119, 337, 350, 444, 822, 960, 966
BstMBI GATC 3 cut(s) 116, 632, 883
BstMWI GCNNNNNNNGC 4 cut(s) 101, 221, 1087, 1108
BstNI CCWGG 1 cut(s) 656
BstNSI RCATGY 2 cut(s) 830, 1008
BstSCI CCNGG 1 cut(s) 654
BstSFI CTRYAG 1 cut(s) 144
BstV1I GCAGC 6 cut(s) 259, 323, 386, 466, 810, 873
BstX2I RGATCY 1 cut(s) 116
BstYI RGATCY 1 cut(s) 116
BsuRI GGCC 2 cut(s) 74, 654
BtrI CACGTC 1 cut(s) 743
BtsCI GGATG 2 cut(s) 468, 665
BtsIMutI CAGTG 1 cut(s) 508
Cac8I GCNNGC 2 cut(s) 517, 1083
Cfr13I GGNCC 1 cut(s) 1160
Csp6I GTAC 4 cut(s) 227, 290, 778, 1152
CviAII CATG 5 cut(s) 67, 827, 941, 1005, 1009
CviQI GTAC 4 cut(s) 227, 290, 778, 1152
DdeI CTNAG 3 cut(s) 194, 230, 957
DpnI GATC 3 cut(s) 118, 634, 885
DpnII GATC 3 cut(s) 116, 632, 883
DraIII CACNNNGTG 1 cut(s) 746
Eam1104I CTCTTC 3 cut(s) 371, 1170, 1207
EarI CTCTTC 3 cut(s) 371, 1170, 1207
Eco130I CCWWGG 2 cut(s) 120, 315
Eco147I AGGCCT 2 cut(s) 74, 654
Eco47I GGWCC 1 cut(s) 1160
Eco57I CTGAAG 1 cut(s) 484
Eco88I CYCGRG 1 cut(s) 281
EcoRII CCWGG 1 cut(s) 654
EcoT14I CCWWGG 2 cut(s) 120, 315
EcoT22I ATGCAT 2 cut(s) 853, 1010
ErhI CCWWGG 2 cut(s) 120, 315
Esp3I CGTCTC 2 cut(s) 337, 960
FaeI CATG 5 cut(s) 70, 830, 944, 1008, 1012
FalI AAGNNNNNCTT 2 cut(s) 936, 968
FatI CATG 5 cut(s) 66, 826, 940, 1004, 1008
FblI GTMKAC 2 cut(s) 720, 868
Fnu4HI GCNGC 6 cut(s) 273, 312, 375, 480, 824, 862
FokI GGATG 2 cut(s) 455, 672
Fsp4HI GCNGC 6 cut(s) 273, 312, 375, 480, 824, 862
FspBI CTAG 4 cut(s) 173, 269, 833, 837
GluI GCNGC 6 cut(s) 273, 312, 375, 480, 824, 862
HaeIII GGCC 2 cut(s) 74, 654
HapII CCGG 2 cut(s) 489, 674
Hin1II CATG 5 cut(s) 70, 830, 944, 1008, 1012
HincII GTYRAC 1 cut(s) 869
HindII GTYRAC 1 cut(s) 869
HinfI GANTC 2 cut(s) 876, 1180
HpaII CCGG 2 cut(s) 489, 674
HphI GGTGA 5 cut(s) 193, 365, 473, 503, 676
Hpy166II GTNNAC 3 cut(s) 721, 793, 869
Hpy188I TCNGA 4 cut(s) 10, 449, 685, 1031
Hpy188III TCNNGA 3 cut(s) 283, 746, 1206
Hpy8I GTNNAC 3 cut(s) 721, 793, 869
Hpy99I CGWCG 3 cut(s) 747, 1172, 1175
HpyAV CCTTC 3 cut(s) 419, 482, 644
HpyCH4III ACNGT 3 cut(s) 725, 977, 1076
HpyCH4IV ACGT 1 cut(s) 742
HpyCH4V TGCA 9 cut(s) 136, 215, 311, 482, 519, 826, 851, 1008, 1081
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 221, 1087, 1108
HpyF3I CTNAG 3 cut(s) 194, 230, 957
HpySE526I ACGT 1 cut(s) 742
Hsp92II CATG 5 cut(s) 70, 830, 944, 1008, 1012
Kzo9I GATC 3 cut(s) 116, 632, 883
LmnI GCTCC 2 cut(s) 324, 1121
Lsp1109I GCAGC 6 cut(s) 259, 323, 386, 466, 810, 873
MaeI CTAG 4 cut(s) 173, 269, 833, 837
MaeII ACGT 1 cut(s) 742
MaeIII GTNAC 2 cut(s) 386, 580
MalI GATC 3 cut(s) 118, 634, 885
MboI GATC 3 cut(s) 116, 632, 883
MboII GAAGA 9 cut(s) 358, 659, 878, 926, 941, 972, 1009, 1187, 1194
MflI RGATCY 1 cut(s) 116
MluCI AATT 2 cut(s) 768, 932
MlyI GAGTC 1 cut(s) 870
Mph1103I ATGCAT 2 cut(s) 853, 1010
MroXI GAANNNNTTC 3 cut(s) 572, 1016, 1213
MseI TTAA 4 cut(s) 381, 551, 936, 1049
MspA1I CMGCKG 2 cut(s) 823, 864
MspI CCGG 2 cut(s) 489, 674
MspR9I CCNGG 1 cut(s) 656
Mva1269I GAATGC 1 cut(s) 851
MvaI CCWGG 1 cut(s) 656
MwoI GCNNNNNNNGC 4 cut(s) 101, 221, 1087, 1108
NdeII GATC 3 cut(s) 116, 632, 883
NlaIII CATG 5 cut(s) 70, 830, 944, 1008, 1012
NlaIV GGNNCC 3 cut(s) 326, 508, 697
NmuCI GTSAC 1 cut(s) 580
NsiI ATGCAT 2 cut(s) 853, 1010
NspI RCATGY 2 cut(s) 830, 1008
NspV TTCGAA 2 cut(s) 33, 340
PceI AGGCCT 2 cut(s) 74, 654
PcsI WCGNNNNNNNCGW 1 cut(s) 739
PctI GAATGC 1 cut(s) 851
PdmI GAANNNNTTC 3 cut(s) 572, 1016, 1213
PfeI GAWTC 1 cut(s) 1180
PkrI GCNGC 6 cut(s) 274, 313, 376, 481, 825, 863
PleI GAGTC 1 cut(s) 870
PpsI GAGTC 1 cut(s) 870
Psp6I CCWGG 1 cut(s) 654
PspGI CCWGG 1 cut(s) 654
PspN4I GGNNCC 3 cut(s) 326, 508, 697
PspPI GGNCC 1 cut(s) 1160
PsuI RGATCY 1 cut(s) 116
PvuII CAGCTG 1 cut(s) 864
RsaI GTAC 4 cut(s) 228, 291, 779, 1153
RsaNI GTAC 4 cut(s) 227, 290, 778, 1152
SalI GTCGAC 1 cut(s) 867
SaqAI TTAA 4 cut(s) 381, 551, 936, 1049
SatI GCNGC 6 cut(s) 273, 312, 375, 480, 824, 862
Sau3AI GATC 3 cut(s) 116, 632, 883
Sau96I GGNCC 1 cut(s) 1160
ScaI AGTACT 1 cut(s) 228
SchI GAGTC 1 cut(s) 870
ScrFI CCNGG 1 cut(s) 656
SfcI CTRYAG 1 cut(s) 144
SfuI TTCGAA 2 cut(s) 33, 340
SinI GGWCC 1 cut(s) 1160
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
Sse9I AATT 2 cut(s) 768, 932
SseBI AGGCCT 2 cut(s) 74, 654
SsiI CCGC 3 cut(s) 222, 821, 1184
SspMI CTAG 4 cut(s) 173, 269, 833, 837
StuI AGGCCT 2 cut(s) 74, 654
StyD4I CCNGG 1 cut(s) 654
StyI CCWWGG 2 cut(s) 120, 315
TaaI ACNGT 3 cut(s) 725, 977, 1076
TaiI ACGT 1 cut(s) 745
TaqI TCGA 7 cut(s) 33, 340, 601, 631, 645, 868, 1217
TaqII GACCGA 1 cut(s) 171
TasI AATT 2 cut(s) 768, 932
TatI WGTACW 2 cut(s) 226, 289
TfiI GAWTC 1 cut(s) 1180
Tru1I TTAA 4 cut(s) 381, 551, 936, 1049
Tru9I TTAA 4 cut(s) 381, 551, 936, 1049
TscAI CASTG 1 cut(s) 508
TseFI GTSAC 1 cut(s) 580
TseI GCWGC 6 cut(s) 272, 311, 374, 479, 823, 861
Tsp45I GTSAC 1 cut(s) 580
TspDTI ATGAA 5 cut(s) 59, 401, 957, 972, 1025
TspGWI ACGGA 2 cut(s) 568, 984
TspRI CASTG 1 cut(s) 508
VpaK11BI GGWCC 1 cut(s) 1160
XapI RAATTY 1 cut(s) 932
XceI RCATGY 2 cut(s) 830, 1008
XmiI GTMKAC 2 cut(s) 720, 868
XmnI GAANNNNTTC 3 cut(s) 572, 1016, 1213
XspI CTAG 4 cut(s) 173, 269, 833, 837
ZrmI AGTACT 1 cut(s) 228
Zsp2I ATGCAT 2 cut(s) 853, 1010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.