Prupe.1G160000_v2.0.a1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001790
Physical Location & Seq
Forward (+)
12743071 .. 12744498
1428 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G160000.1

Sequence Viewer

Length: 954 bp
ATGGCTTCATATGAGGAAGTAGATAGCTTGTTCGAAAATGCCATGAAAGGCCAGTGGGGAAAGGTGGTGGAGGCCTACAGAAATTGTTCCAAGGCTCGAGAGGCCAACATAACCAAATCAAAAGAGACTGCTCTACACATAGCAATTGCAGATGGCCAAACAGAAACCGCACTGGACTTGTTGAACATCATTGCCAATGGAGAAAATGCCTTAAACATATTGAAAATAGGAAATGAGAAAGGCAACACAGCTCTCCATCTAGCTGCTAGGCTTGGCTATGTCCAAGTGTGTCAAAGCATGGTTACCAAAGATCGCAGCCTTGTCTCCCTTCGCAACATCGACGGTGAGACCCCTCTCTTCTTGGCAGCTCTTAATGGCCACAATAAGGCTTTCCTTTGCCTTCACTCTCACTGCCAAGAAAAATACCATTCCTTTAGAGACAATAATGGTGACACCATTCTCCATGCTGCTATCTCTGGTGAATACTTCAGTTTGGCATTTCAGATTATTCGGTTGTACCCGGAACTTGTTAACTCTATGAATGAAAATGGTTTCTCTCCCCTGCATATTCTGGCCAGTAAGCCTAGTGCATTCAAAAGCAGTAGTCGCCTCGGACTGATTGGTCATATTATATACCATTGTTTGATTGTTGAAGAGCTCAAAGAGGAATCATATAAATACGAAGCTTGTCTGCACAACGAAGGAGCACAAAACAATTCTAAATATCCAGAAAACTATGAAACATGCATGAACTTCGCTCGAGTTCTGAGGAGTTTCTTTCAAGTGTTAACAAACACACGGGGAAACCAGAATTGGATGCCTTGCTCACTCCTTCGAGCTAATGGAGGAAATAAAAATGGCAAAAATGCTGCTGATGATGAAGAGAATCCCCAACAACGGAGCAGCTCAGTGATAAGTAATCCTCATAACCTGTTACGGGAAATATTTAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

318

Amino Acids

35.4

Weight (kDa)

6.46

Isoelectric Point (pI)

41.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 621
AciI CCGC 1 cut(s) 168
AcoI YGGCCR 3 cut(s) 154, 376, 573
AcuI CTGAAG 1 cut(s) 472
AfaI GTAC 1 cut(s) 518
AfiI CCNNNNNNNGG 3 cut(s) 385, 897, 937
AgsI TTSAA 5 cut(s) 184, 223, 595, 653, 782
AjuI GAANNNNNNNTTGG 2 cut(s) 796, 828
AluBI AGCT 8 cut(s) 27, 251, 263, 368, 658, 686, 839, 906
AluI AGCT 8 cut(s) 27, 251, 263, 368, 658, 686, 839, 906
Alw21I GWGCWC 2 cut(s) 660, 709
Alw26I GTCTC 4 cut(s) 119, 328, 341, 432
Ama87I CYCGRG 2 cut(s) 96, 759
AoxI GGCC 6 cut(s) 49, 72, 102, 154, 376, 573
ApeKI GCWGC 6 cut(s) 263, 315, 365, 467, 869, 903
Asp700I GAANNNNTTC 1 cut(s) 85
AsuC2I CCSGG 1 cut(s) 521
AsuHPI GGTGA 3 cut(s) 356, 461, 491
AsuII TTCGAA 1 cut(s) 33
AvaI CYCGRG 2 cut(s) 96, 759
BalI TGGCCA 3 cut(s) 156, 378, 575
BanII GRGCYC 1 cut(s) 660
Bbv12I GWGCWC 2 cut(s) 660, 709
BbvI GCAGC 6 cut(s) 250, 327, 377, 454, 856, 915
BccI CCATC 2 cut(s) 146, 264
BcgI CGANNNNNNTGC 2 cut(s) 736, 770
BcnI CCSGG 1 cut(s) 521
BcoDI GTCTC 4 cut(s) 119, 328, 341, 432
BfaI CTAG 3 cut(s) 260, 267, 585
BfmI CTRYAG 1 cut(s) 76
BisI GCNGC 6 cut(s) 264, 316, 366, 468, 870, 904
BlsI GCNGC 6 cut(s) 265, 317, 367, 469, 871, 905
Bme1390I CCNGG 1 cut(s) 521
BmeT110I CYCGRG 2 cut(s) 96, 759
BmrFI CCNGG 1 cut(s) 521
BmsI GCATC 1 cut(s) 807
Bpu14I TTCGAA 1 cut(s) 33
BpuMI CCSGG 1 cut(s) 521
BsaI GGTCTC 1 cut(s) 341
BsaJI CCNNGG 2 cut(s) 90, 610
Bsc4I CCNNNNNNNGG 3 cut(s) 385, 897, 937
Bse1I ACTGG 3 cut(s) 52, 177, 576
Bse3DI GCAATG 1 cut(s) 189
BseDI CCNNGG 2 cut(s) 90, 610
BseGI GGATG 1 cut(s) 822
BseLI CCNNNNNNNGG 3 cut(s) 385, 897, 937
BseMI GCAATG 1 cut(s) 189
BseMII CTCAG 2 cut(s) 758, 921
BseNI ACTGG 3 cut(s) 52, 177, 576
BseRI GAGGAG 1 cut(s) 784
BseXI GCAGC 6 cut(s) 250, 327, 377, 454, 856, 915
BsgI GTGCAG 1 cut(s) 677
BshFI GGCC 6 cut(s) 51, 74, 104, 156, 378, 575
BsiHKAI GWGCWC 2 cut(s) 660, 709
BsiHKCI CYCGRG 2 cut(s) 96, 759
BsiSI CCGG 1 cut(s) 521
BslI CCNNNNNNNGG 3 cut(s) 385, 897, 937
BsmAI GTCTC 4 cut(s) 119, 328, 341, 432
BsmI GAATGC 1 cut(s) 590
BsnI GGCC 6 cut(s) 51, 74, 104, 156, 378, 575
Bso31I GGTCTC 1 cut(s) 341
BsoBI CYCGRG 2 cut(s) 96, 759
Bsp119I TTCGAA 1 cut(s) 33
Bsp1286I GDGCHC 2 cut(s) 660, 709
Bsp143I GATC 1 cut(s) 310
BspACI CCGC 1 cut(s) 168
BspANI GGCC 6 cut(s) 51, 74, 104, 156, 378, 575
BspCNI CTCAG 2 cut(s) 759, 920
BspQI GCTCTTC 1 cut(s) 648
BspT104I TTCGAA 1 cut(s) 33
BspTNI GGTCTC 1 cut(s) 341
BsrDI GCAATG 1 cut(s) 189
BsrI ACTGG 3 cut(s) 52, 177, 576
BssECI CCNNGG 2 cut(s) 90, 610
BssMI GATC 1 cut(s) 310
BssT1I CCWWGG 1 cut(s) 90
Bst4CI ACNGT 1 cut(s) 344
Bst6I CTCTTC 3 cut(s) 362, 648, 876
BstBI TTCGAA 1 cut(s) 33
BstDEI CTNAG 2 cut(s) 767, 907
BstEII GGTNACC 1 cut(s) 301
BstF5I GGATG 1 cut(s) 822
BstKTI GATC 1 cut(s) 313
BstMAI GTCTC 4 cut(s) 119, 328, 341, 432
BstMBI GATC 1 cut(s) 310
BstMWI GCNNNNNNNGC 2 cut(s) 101, 606
BstNSI RCATGY 1 cut(s) 747
BstPI GGTNACC 1 cut(s) 301
BstSCI CCNGG 1 cut(s) 519
BstSFI CTRYAG 1 cut(s) 76
BstV1I GCAGC 6 cut(s) 250, 327, 377, 454, 856, 915
BsuRI GGCC 6 cut(s) 51, 74, 104, 156, 378, 575
BtsCI GGATG 1 cut(s) 822
BtsI GCAGTG 1 cut(s) 409
BtsIMutI CAGTG 4 cut(s) 59, 170, 409, 915
Csp6I GTAC 1 cut(s) 517
CviAII CATG 5 cut(s) 43, 298, 464, 744, 748
CviQI GTAC 1 cut(s) 517
DdeI CTNAG 2 cut(s) 767, 907
DpnI GATC 1 cut(s) 312
DpnII GATC 1 cut(s) 310
DrdI GACNNNNNNGTC 1 cut(s) 621
DseDI GACNNNNNNGTC 1 cut(s) 621
EaeI YGGCCR 3 cut(s) 154, 376, 573
Eam1104I CTCTTC 3 cut(s) 362, 648, 876
EarI CTCTTC 3 cut(s) 362, 648, 876
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 1 cut(s) 90
Eco147I AGGCCT 1 cut(s) 74
Eco24I GRGCYC 1 cut(s) 660
Eco31I GGTCTC 1 cut(s) 341
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 1 cut(s) 472
Eco88I CYCGRG 2 cut(s) 96, 759
Eco91I GGTNACC 1 cut(s) 301
EcoICRI GAGCTC 1 cut(s) 658
EcoO65I GGTNACC 1 cut(s) 301
EcoT14I CCWWGG 1 cut(s) 90
EcoT22I ATGCAT 1 cut(s) 749
EcoT38I GRGCYC 1 cut(s) 660
ErhI CCWWGG 1 cut(s) 90
FaeI CATG 5 cut(s) 46, 301, 467, 747, 751
FatI CATG 5 cut(s) 42, 297, 463, 743, 747
FauNDI CATATG 1 cut(s) 10
Fnu4HI GCNGC 6 cut(s) 264, 316, 366, 468, 870, 904
FokI GGATG 1 cut(s) 829
FriOI GRGCYC 1 cut(s) 660
Fsp4HI GCNGC 6 cut(s) 264, 316, 366, 468, 870, 904
FspBI CTAG 3 cut(s) 260, 267, 585
GluI GCNGC 6 cut(s) 264, 316, 366, 468, 870, 904
HaeIII GGCC 6 cut(s) 51, 74, 104, 156, 378, 575
HapII CCGG 1 cut(s) 521
Hin1II CATG 5 cut(s) 46, 301, 467, 747, 751
HincII GTYRAC 2 cut(s) 532, 789
HindII GTYRAC 2 cut(s) 532, 789
HindIII AAGCTT 1 cut(s) 684
HinfI GANTC 2 cut(s) 668, 886
HpaI GTTAAC 2 cut(s) 532, 789
HpaII CCGG 1 cut(s) 521
HphI GGTGA 3 cut(s) 356, 461, 491
Hpy166II GTNNAC 2 cut(s) 532, 789
Hpy188I TCNGA 3 cut(s) 504, 614, 768
Hpy188III TCNNGA 2 cut(s) 98, 728
Hpy8I GTNNAC 2 cut(s) 532, 789
Hpy99I CGWCG 1 cut(s) 344
HpyAV CCTTC 4 cut(s) 338, 410, 695, 842
HpyCH4III ACNGT 1 cut(s) 344
HpyCH4V TGCA 5 cut(s) 149, 565, 590, 694, 747
HpyF10VI GCNNNNNNNGC 2 cut(s) 101, 606
HpyF3I CTNAG 2 cut(s) 767, 907
Hsp92II CATG 5 cut(s) 46, 301, 467, 747, 751
KspAI GTTAAC 2 cut(s) 532, 789
Kzo9I GATC 1 cut(s) 310
LguI GCTCTTC 1 cut(s) 648
LmnI GCTCC 2 cut(s) 704, 900
Lsp1109I GCAGC 6 cut(s) 250, 327, 377, 454, 856, 915
LweI GCATC 1 cut(s) 807
MaeI CTAG 3 cut(s) 260, 267, 585
MaeIII GTNAC 3 cut(s) 301, 449, 933
MalI GATC 1 cut(s) 312
MboI GATC 1 cut(s) 310
MboII GAAGA 3 cut(s) 349, 665, 893
MfeI CAATTG 1 cut(s) 144
MhlI GDGCHC 2 cut(s) 660, 709
MlsI TGGCCA 3 cut(s) 156, 378, 575
MluCI AATT 4 cut(s) 82, 144, 715, 811
MluNI TGGCCA 3 cut(s) 156, 378, 575
MnlI CCTC 9 cut(s) 7, 64, 94, 363, 620, 658, 762, 839, 933
Mox20I TGGCCA 3 cut(s) 156, 378, 575
Mph1103I ATGCAT 1 cut(s) 749
MroXI GAANNNNTTC 1 cut(s) 85
MscI TGGCCA 3 cut(s) 156, 378, 575
MseI TTAA 4 cut(s) 212, 372, 531, 788
Msp20I TGGCCA 3 cut(s) 156, 378, 575
MspI CCGG 1 cut(s) 521
MspR9I CCNGG 1 cut(s) 521
MunI CAATTG 1 cut(s) 144
Mva1269I GAATGC 1 cut(s) 590
MwoI GCNNNNNNNGC 2 cut(s) 101, 606
NciI CCSGG 1 cut(s) 521
NdeI CATATG 1 cut(s) 10
NdeII GATC 1 cut(s) 310
NlaIII CATG 5 cut(s) 46, 301, 467, 747, 751
NmuCI GTSAC 1 cut(s) 449
NsiI ATGCAT 1 cut(s) 749
NspI RCATGY 1 cut(s) 747
NspV TTCGAA 1 cut(s) 33
PaeR7I CTCGAG 2 cut(s) 96, 759
PceI AGGCCT 1 cut(s) 74
PciSI GCTCTTC 1 cut(s) 648
PctI GAATGC 1 cut(s) 590
PdmI GAANNNNTTC 1 cut(s) 85
PfeI GAWTC 2 cut(s) 668, 886
PkrI GCNGC 6 cut(s) 265, 317, 367, 469, 871, 905
Psp124BI GAGCTC 1 cut(s) 660
PspEI GGTNACC 1 cut(s) 301
PspXI VCTCGAGB 1 cut(s) 759
RsaI GTAC 1 cut(s) 518
RsaNI GTAC 1 cut(s) 517
SacI GAGCTC 1 cut(s) 660
SapI GCTCTTC 1 cut(s) 648
SaqAI TTAA 4 cut(s) 212, 372, 531, 788
SatI GCNGC 6 cut(s) 264, 316, 366, 468, 870, 904
Sau3AI GATC 1 cut(s) 310
ScrFI CCNGG 1 cut(s) 521
SduI GDGCHC 2 cut(s) 660, 709
SfaNI GCATC 1 cut(s) 807
SfcI CTRYAG 1 cut(s) 76
Sfr274I CTCGAG 2 cut(s) 96, 759
SfuI TTCGAA 1 cut(s) 33
SlaI CTCGAG 2 cut(s) 96, 759
SmlI CTYRAG 2 cut(s) 96, 759
SmoI CTYRAG 2 cut(s) 96, 759
Sse9I AATT 4 cut(s) 82, 144, 715, 811
SseBI AGGCCT 1 cut(s) 74
SsiI CCGC 1 cut(s) 168
SspI AATATT 1 cut(s) 945
SspMI CTAG 3 cut(s) 260, 267, 585
SstI GAGCTC 1 cut(s) 660
StuI AGGCCT 1 cut(s) 74
StyD4I CCNGG 1 cut(s) 519
StyI CCWWGG 1 cut(s) 90
TaaI ACNGT 1 cut(s) 344
TaqI TCGA 5 cut(s) 33, 97, 339, 760, 835
TasI AATT 4 cut(s) 82, 144, 715, 811
TfiI GAWTC 2 cut(s) 668, 886
Tru1I TTAA 4 cut(s) 212, 372, 531, 788
Tru9I TTAA 4 cut(s) 212, 372, 531, 788
TscAI CASTG 4 cut(s) 59, 177, 416, 915
TseFI GTSAC 1 cut(s) 449
TseI GCWGC 6 cut(s) 263, 315, 365, 467, 869, 903
Tsp45I GTSAC 1 cut(s) 449
TspDTI ATGAA 6 cut(s) 59, 554, 558, 753, 764, 894
TspGWI ACGGA 1 cut(s) 913
TspRI CASTG 4 cut(s) 59, 177, 416, 915
XceI RCATGY 1 cut(s) 747
XhoI CTCGAG 2 cut(s) 96, 759
XmnI GAANNNNTTC 1 cut(s) 85
XspI CTAG 3 cut(s) 260, 267, 585
Zsp2I ATGCAT 1 cut(s) 749
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.