Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002025

Physical Location & Seq

Genomic Coordinates Forward (+)

1304203 .. 1311433

Gene Structure 7231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g02090.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2982 bp

ATGGCGACCAAGTTCTTTGCTCTTGCGTGCATACGCGACAGCAACGGTGAAGCCCGCGGCGGCAGCAGCGATCTGTCGCCGCGGCCTCACTACCCGTCCATGCCAAAGTACCCTAAGGGCGTGGTGGCGGAGGAGACCACTATGGTGGAGGGCACCGAGTCCAAGGCTGTGTTCTCCGTCATCGGCATGACCTGCTCCGCCTGCGCCGGATCTGTAGAGAAGGCTGTGAAGAGGCTACCGGGGATTCGTGAAGCTGTCGTCGACGTGCTCAACAATCGTGCTCAAGTCATGTTCTTCCCCGATTTCGTTAACGCGGAGACCATCCGTGAGACAATTGAAGATGTTGGATTTCAAGCAACATTGATTGCTGACGAGGGAAATGAGAAGTCCACGTTGGTATGCAGAATAAGGATCAAAGGAATGACATGCACTTCTTGCTCTTCCACTGTTGAATCAGCTTTGCAGGCAGTGCATGGTGTACAAAAGGCCCAAGTTGCCTTAGCAACTGAAGAAGCAGATGTCCACTATGATCCCAAGATAGTGAGCTGCAATCAGCTGATGGTAACCATTGAAGACACTGGATTCGAAGCCATACTTATCAATTCAGGTGAAGGCATGAGCAAGATTGATCTTAAAGTTGACGGTGTAAGAACTGATCATTCGATGCGAATACTTGAGGAGTCTCTTCAAGCACTCCCTGGGGTGCAAGGTGTAGATATACATCATGATGACAGAAAAATATCACTTTCTTACAAGCCAGATATAACAGGTCCAAGAAACTTCATCAATGTGATTGAAACAACTGGATCAAGGCGTTTCAGGGCGAAGATATATCCAGGTGGTGGAGCAGGAAGAGAAAGTCATAGGAAGGAGGAGATTCAGCAGTACTACAGATTCTTTCTCTGGAGTTTGGTTTTCACTGTTCCGGTATTTTTAACTTCCATGGTCTTCATGTACATTCCTGGACTTAAACATGGCTTGGATAAGAAAGTAGTAAATATGCTCAGCATTGGGGAGCTTATAAGGTGGATTCTGTCCACTCCGGTGCAGTTCATCATAGGCCGGAGGTTCTATACTGGCGCATACAAGTCGTTGCGCCATGGTTCTGCTAATATGGATGTGTTAATTGCCTTGGGAACTAATGCAGCATATTTCTATTCAGTCTATTCTGTACTTAGAGCTGCCACCTCCCCTCATTTTAAGGGTACAGATTTCTTTGAGACAAGTGCAATGCTTATATCATTCATTCTGTTAGGGAAGTACCTTGAGGTGTTAGCTAAGGGGAAGACATCTGATGCCATTGCCAAACTGATGGACTTGGCACCTGATACAGCCACTTTGTTGACATTAGACGAAGAAGGGAATGTGTTAGGGGAAGAAGAAATTGATGGTCGGTTGATACAAAAGAATGATGTTATCAAAATTATTCCAGGGGCGAAAGTAGCTTCAGATGGTTATGTGATATGGGGACAAAGCCATGTGAATGAGAGTATGATAACAGGAGAAGCGCGGCCAGTGGCGAAAAGGAAGGGTGATACAGTCATTGGAGGTACTGTGAATGAAAATGGTGTGTTGCATATCAAGGCAACAAGGGTTGGATCAGAAAGTTCCCTTGCGCAGATCGTACGGCTTGTTGAGTCTGCTCAGATGGCGAAAGCTCCTGCTCAGAAGTTTGCTGACCGCATTTCTAAGTTCTTTGTGCCACTGGTGATCATGCTTTCATTCTTTACCTGGCTATCATGGTTTTTGGCTGGAAAATTCCATGGCTACCCGAAATCTTGGATACCGAAGTCCATGGATAGCTTTCAGCTTGCTCTCCAGTTTGGAATCTCTGTCATGGTTATTGCCTGCCCTTGTGCTCTAGGCCTAGCAACTCCTACTGCTGTCATGGTTGGTACTGGAGTTGGTGCATCCCAAGGTGTACTGATCAAAGGAGGCCAGGCATTAGAAAGTGCACATAAGGTGAACTGCATTGTGTTTGACAAGACAGGGACTCTCACAATTGGGAAGCCACTCGTTGTTAACACACGACTCCTGAAAAATATGGTGCTTCGAGAATTCTATGAACTTGTTGCGGCAGCTGAGGTTAACAGTGAACACCCTTTGGCCAAGGCCATTGTTGAGTATGCCAAAAAATTCAGAGAAGATGAAGAGAATCCAACCTGGCCAGAAGCGCATGACTTCGCCTCCATTACCGGTCATGGGGTGAAAGCTATTGTTCGAGGCAGGGAAATAATTGTGGGGAACAAGAGCTTGATGGTGGATCAGAACATTGCAGTTCCACTTGATGCAGAAGACTACCTTGCAGAAGCTGAAGGGCTGGCTCAAACAGGGATTCTAGTAGCCATAGATGGACAAGTGGCCGGAGTTCTAGCAATATCTGATCCACTGAAACCAGGTGCTCAAGAAGTCATTACCATACTCAAGTCCATGAATGTTAAAAGCATAATGGTGACAGGTGACAATTGGGGTACTGCAAATTCTATTGCCAACGAAGTTGGTATCGATACTGTTATAGCTGAAGCGAAACCTGACCAGAAAGCAGAGGAAGTGAAGAGATTGCAGGCTTTAGGCAACACTGTGGCGATGGTGGGAGATGGCATCAATGATTCACCAGCACTTGTGGCAGCAGATGTAGGCATGGCAATTGGTGCTGGCACAGACATTGCAATTGAGGCAGCAGACATTGTGCTTATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGATCTTTCGAGGAAAACCTTCACTCGTATTCGTTTGAACTACATTTGGGCGTTGGGTTATAATGTGCTCGGGATCCCAATAGCTGCAGGGGTTCTCTTCCCATCCACTGGATTTCGCTTACCCCCATGGATTGCTGGAGCTGCAATGGCTGCTTCTTCTGTCAGTGTAGTTTGCTGTTCATTGTTGTTGAAGAATTACAAGAGACCCAAGGAGCTAAATAACCTTGAGGTGCGTGGAATAATGATCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0008150 GO:0008324 GO:0009636 GO:0010035 GO:0010038 GO:0010273 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046688 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061687 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0097501 GO:0098655 GO:0098660 GO:0098662 GO:0098754 GO:0099131 GO:0099132 GO:1990169

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

994

Amino Acids

107.44

Weight (kDa)

6.17

Isoelectric Point (pI)

28.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMA	PF00403	57 - 117	7.2e-15	Heavy-metal-associated domain
HMA	PF00403	136 - 196	4.9e-13	Heavy-metal-associated domain
E1-E2_ATPase	PF00122	440 - 546	2.4e-23	P-type ATPase actuator domain
Hydrolase	PF00702	656 - 878	1.3e-34	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63440
fragaria_vesca	FvH4_5g02090 FvH4_5g02090 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091
malus_domestica	MD06G1080800.v1.1 MD06G1080900.v1.1 MD14G1102600.v1.1
prunus_persica	Prupe.5G097900_v2.0.a1 Prupe.5G097900_v2.0.a1 Prupe.5G098000_v2.0.a1
pyrus_communis	pycom06g07780 pycom06g07790 pycom14g09890
rosa_chinensis	RchiOBHm_Chr7g0197781 RchiOBHm_Chr7g0198111 RchiOBHm_Chr7g0198141
rosa_laevigata	RLG00000003885 RLG00000003888 RLG00000019170
rosa_multiflora	Rmu_sc0000221.1_g000018 Rmu_sc0000221.1_g000030 Rmu_sc0006732.1_g000016
rosa_roxburghii	Rroxscaffold_3G00257940 Rroxscaffold_3G00257970 Rroxscaffold_3G00257990
rosa_rugosa	Rorug07G0045700 Rorug07G0045700 Rorug07G0045800 Rorug07G0045800 Rorug07G0045900
rosa_samantha	Rh7AG169100 Rh7AG169200 Rh7BG169900 Rh7BG172300 Rh7CG178600 Rh7CG178700 Rh7DG169200 Rh7DG171400 Rh7DG171800
rosa_wichuraiana	Rw7G014570 Rw7G014780 Rw7G014790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1022, 2790
Acc16I	TGCGCA	1 cut(s)	1617
Acc36I	ACCTGC	1 cut(s)	200
AccB1I	GGYRCC	2 cut(s)	152, 1321
AccB7I	CCANNNNNTGG	2 cut(s)	842, 2837
AccI	GTMKAC	1 cut(s)	261
AccII	CGCG	5 cut(s)	36, 57, 82, 314, 1510
AclWI	GGATC	9 cut(s)	217, 419, 524, 814, 1606, 2271, 2378, 2797, 2810
AcoI	YGGCCR	4 cut(s)	1511, 2106, 2165, 2361
AcsI	RAATTY	4 cut(s)	1757, 2057, 2135, 2479
AcuI	CTGAAG	4 cut(s)	528, 1431, 2334, 2541
AfiI	CCNNNNNNNGG	3 cut(s)	842, 2202, 2837
AgeI	ACCGGT	1 cut(s)	2195
AgsI	TTSAA	8 cut(s)	338, 353, 452, 572, 689, 797, 2767, 2920
AjiI	CACGTC	1 cut(s)	265
AjnI	CCWGG	8 cut(s)	697, 835, 961, 1429, 1730, 1938, 2162, 2395
AjuI	GAANNNNNNNTTGG	6 cut(s)	155, 187, 377, 409, 2690, 2722
AleI	CACNNNNGTG	2 cut(s)	143, 1043
Alw21I	GWGCWC	6 cut(s)	270, 283, 1861, 1957, 2404, 2799
Alw26I	GTCTC	6 cut(s)	128, 311, 323, 687, 1214, 2926
Alw44I	GTGCAC	1 cut(s)	1953
AlwI	GGATC	9 cut(s)	217, 419, 524, 814, 1606, 2271, 2378, 2797, 2810
AlwNI	CAGNNNCTG	1 cut(s)	2312
Ama87I	CYCGRG	1 cut(s)	2798
ApaLI	GTGCAC	1 cut(s)	1953
ApoI	RAATTY	4 cut(s)	1757, 2057, 2135, 2479
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
AsiGI	ACCGGT	1 cut(s)	2195
Asp700I	GAANNNNTTC	1 cut(s)	2747
AspLEI	GCGC	6 cut(s)	206, 1082, 1098, 1510, 1618, 2176
AspS9I	GGNCC	2 cut(s)	487, 770
AsuC2I	CCSGG	1 cut(s)	240
AsuHPI	GGTGA	9 cut(s)	59, 620, 1544, 1720, 1975, 2218, 2464, 2471, 2604
AsuII	TTCGAA	1 cut(s)	585
AvaI	CYCGRG	1 cut(s)	2798
AvaII	GGWCC	1 cut(s)	770
AxyI	CCTNAGG	1 cut(s)	114
BaeGI	GKGCMC	2 cut(s)	155, 1957
BaeI	ACNNNNGTAYC	4 cut(s)	1775, 1808, 1887, 1920
BalI	TGGCCA	2 cut(s)	2108, 2167
BamHI	GGATCC	1 cut(s)	2802
BanI	GGYRCC	2 cut(s)	152, 1321
BbsI	GAAGAC	4 cut(s)	579, 940, 1292, 2301
Bbv12I	GWGCWC	6 cut(s)	270, 283, 1861, 1957, 2404, 2799
BbvCI	CCTCAGC	1 cut(s)	2082
BceAI	ACGGC	1 cut(s)	1643
BcgI	CGANNNNNNTGC	2 cut(s)	1071, 1105
BciT130I	CCWGG	8 cut(s)	699, 837, 963, 1431, 1732, 1940, 2164, 2397
BciVI	GTATCC	1 cut(s)	1776
BclI	TGATCA	3 cut(s)	655, 1710, 1926
BcnI	CCSGG	1 cut(s)	240
BcoDI	GTCTC	6 cut(s)	128, 311, 323, 687, 1214, 2926
BfaI	CTAG	4 cut(s)	1862, 1868, 2339, 2372
BfmI	CTRYAG	3 cut(s)	213, 889, 2814
BfuAI	ACCTGC	1 cut(s)	200
BfuI	GTATCC	1 cut(s)	1776
BlpI	GCTNAGC	1 cut(s)	1004
BmcAI	AGTACT	1 cut(s)	887
Bme1390I	CCNGG	9 cut(s)	240, 699, 837, 963, 1431, 1732, 1940, 2164, 2397
Bme18I	GGWCC	1 cut(s)	770
BmeT110I	CYCGRG	1 cut(s)	2798
BmgBI	CACGTC	1 cut(s)	265
BmgT120I	GGNCC	2 cut(s)	487, 770
BmiI	GGNNCC	3 cut(s)	154, 1323, 2804
BmrFI	CCNGG	9 cut(s)	240, 699, 837, 963, 1431, 1732, 1940, 2164, 2397
BmsI	GCATC	5 cut(s)	654, 1285, 1919, 2278, 2610
BpiI	GAAGAC	4 cut(s)	579, 940, 1292, 2301
BpmI	CTGGAG	4 cut(s)	925, 1802, 1920, 2886
Bpu10I	CCTNAGC	3 cut(s)	499, 1278, 2082
Bpu1102I	GCTNAGC	1 cut(s)	1004
Bpu14I	TTCGAA	1 cut(s)	585
BpuEI	CTTGAG	6 cut(s)	267, 695, 1286, 2388, 2408, 2975
BpuMI	CCSGG	1 cut(s)	240
Bsa29I	ATCGAT	1 cut(s)	2505
BsaBI	GATNNNNATC	1 cut(s)	720
BsaI	GGTCTC	3 cut(s)	128, 311, 2926
BsaWI	WCCGGW	3 cut(s)	925, 1042, 2195
BsaXI	ACNNNNNCTCC	4 cut(s)	1539, 1569, 2171, 2201
Bsc4I	CCNNNNNNNGG	3 cut(s)	842, 2202, 2837
Bse118I	RCCGGY	1 cut(s)	2195
Bse1I	ACTGG	8 cut(s)	583, 808, 1081, 1514, 1710, 1819, 1903, 2842
Bse21I	CCTNAGG	1 cut(s)	114
Bse3DI	GCAATG	5 cut(s)	1236, 1299, 2271, 2664, 2880
Bse8I	GATNNNNATC	1 cut(s)	720
BseBI	CCWGG	8 cut(s)	699, 837, 963, 1431, 1732, 1940, 2164, 2397
BseCI	ATCGAT	1 cut(s)	2505
BseGI	GGATG	5 cut(s)	321, 1123, 1910, 2719, 2831
BseJI	GATNNNNATC	1 cut(s)	720
BseLI	CCNNNNNNNGG	3 cut(s)	842, 2202, 2837
BseMI	GCAATG	5 cut(s)	1236, 1299, 2271, 2664, 2880
BseMII	CTCAG	4 cut(s)	1018, 1658, 1679, 2073
BseNI	ACTGG	8 cut(s)	583, 808, 1081, 1514, 1710, 1819, 1903, 2842
BseRI	GAGGAG	3 cut(s)	146, 692, 887
BseSI	GKGCMC	2 cut(s)	155, 1957
BsgI	GTGCAG	1 cut(s)	1067
Bsh1236I	CGCG	5 cut(s)	36, 57, 82, 314, 1510
BshNI	GGYRCC	2 cut(s)	152, 1321
BshTI	ACCGGT	1 cut(s)	2195
BshVI	ATCGAT	1 cut(s)	2505
BsiHKAI	GWGCWC	6 cut(s)	270, 283, 1861, 1957, 2404, 2799
BsiHKCI	CYCGRG	1 cut(s)	2798
BsiSI	CCGG	7 cut(s)	207, 239, 926, 1043, 1063, 2196, 2364
BsiWI	CGTACG	1 cut(s)	1624
BslFI	GGGAC	2 cut(s)	1482, 2005
BslI	CCNNNNNNNGG	3 cut(s)	842, 2202, 2837
BsmAI	GTCTC	6 cut(s)	128, 311, 323, 687, 1214, 2926
BsmFI	GGGAC	2 cut(s)	1482, 2005
Bso31I	GGTCTC	3 cut(s)	128, 311, 2926
BsoBI	CYCGRG	1 cut(s)	2798
Bsp119I	TTCGAA	1 cut(s)	585
Bsp1286I	GDGCHC	7 cut(s)	155, 270, 283, 1861, 1957, 2404, 2799
Bsp1407I	TGTACA	2 cut(s)	478, 954
Bsp1720I	GCTNAGC	1 cut(s)	1004
Bsp19I	CCATGG	5 cut(s)	942, 1099, 1762, 1794, 2855
BspCNI	CTCAG	4 cut(s)	1017, 1657, 1678, 2074
BspDI	ATCGAT	1 cut(s)	2505
BspFNI	CGCG	5 cut(s)	36, 57, 82, 314, 1510
BspHI	TCATGA	1 cut(s)	724
BspLI	GGNNCC	3 cut(s)	154, 1323, 2804
BspMAI	CTGCAG	1 cut(s)	2818
BspMI	ACCTGC	1 cut(s)	200
BspPI	GGATC	9 cut(s)	217, 419, 524, 814, 1606, 2271, 2378, 2797, 2810
BspQI	GCTCTTC	2 cut(s)	445, 2693
BspT104I	TTCGAA	1 cut(s)	585
BspT107I	GGYRCC	2 cut(s)	152, 1321
BspTNI	GGTCTC	3 cut(s)	128, 311, 2926
BsrDI	GCAATG	5 cut(s)	1236, 1299, 2271, 2664, 2880
BsrFI	RCCGGY	1 cut(s)	2195
BsrGI	TGTACA	2 cut(s)	478, 954
BsrI	ACTGG	8 cut(s)	583, 808, 1081, 1514, 1710, 1819, 1903, 2842
BssAI	RCCGGY	1 cut(s)	2195
Bst2UI	CCWGG	8 cut(s)	699, 837, 963, 1431, 1732, 1940, 2164, 2397
Bst4CI	ACNGT	9 cut(s)	47, 448, 644, 922, 1540, 1555, 2093, 2512, 2581
Bst6I	CTCTTC	8 cut(s)	224, 445, 690, 847, 2145, 2549, 2693, 2831
BstAPI	GCANNNNNTGC	5 cut(s)	192, 435, 469, 2651, 2879
BstAUI	TGTACA	2 cut(s)	478, 954
BstBI	TTCGAA	1 cut(s)	585
BstC8I	GCNNGC	9 cut(s)	28, 55, 202, 465, 1812, 1849, 2322, 2565, 2656
BstDEI	CTNAG	9 cut(s)	114, 499, 1004, 1175, 1278, 1644, 1665, 1689, 2082
BstDSI	CCRYGG	7 cut(s)	55, 80, 942, 1099, 1762, 1794, 2855
BstEII	GGTNACC	1 cut(s)	562
BstF5I	GGATG	5 cut(s)	321, 1123, 1910, 2719, 2831
BstFNI	CGCG	5 cut(s)	36, 57, 82, 314, 1510
BstHHI	GCGC	6 cut(s)	206, 1082, 1098, 1510, 1618, 2176
BstMAI	GTCTC	6 cut(s)	128, 311, 323, 687, 1214, 2926
BstNI	CCWGG	8 cut(s)	699, 837, 963, 1431, 1732, 1940, 2164, 2397
BstNSI	RCATGY	1 cut(s)	429
BstPI	GGTNACC	1 cut(s)	562
BstSCI	CCNGG	9 cut(s)	238, 697, 835, 961, 1429, 1730, 1938, 2162, 2395
BstSFI	CTRYAG	3 cut(s)	213, 889, 2814
BstSLI	GKGCMC	2 cut(s)	155, 1957
BstUI	CGCG	5 cut(s)	36, 57, 82, 314, 1510
BstV2I	GAAGAC	4 cut(s)	579, 940, 1292, 2301
BstX2I	RGATCY	2 cut(s)	209, 2802
BstXI	CCANNNNNNTGG	2 cut(s)	145, 1312
BstYI	RGATCY	2 cut(s)	209, 2802
Bsu15I	ATCGAT	1 cut(s)	2505
Bsu36I	CCTNAGG	1 cut(s)	114
BsuI	GTATCC	1 cut(s)	1776
BsuTUI	ATCGAT	1 cut(s)	2505
BtgI	CCRYGG	7 cut(s)	55, 80, 942, 1099, 1762, 1794, 2855
BtgZI	GCGATG	1 cut(s)	2600
BtrI	CACGTC	1 cut(s)	265
BtsCI	GGATG	5 cut(s)	321, 1123, 1910, 2719, 2831
BtsI	GCAGTG	1 cut(s)	474
BveI	ACCTGC	1 cut(s)	200
Cac8I	GCNNGC	9 cut(s)	28, 55, 202, 465, 1812, 1849, 2322, 2565, 2656
CaiI	CAGNNNCTG	1 cut(s)	2312
CciI	TCATGA	1 cut(s)	724
CfoI	GCGC	6 cut(s)	206, 1082, 1098, 1510, 1618, 2176
Cfr10I	RCCGGY	1 cut(s)	2195
Cfr13I	GGNCC	2 cut(s)	487, 770
Cfr42I	CCGCGG	2 cut(s)	58, 83
ClaI	ATCGAT	1 cut(s)	2505
CsiI	ACCWGGT	1 cut(s)	2395
CspAI	ACCGGT	1 cut(s)	2195
DdeI	CTNAG	9 cut(s)	114, 499, 1004, 1175, 1278, 1644, 1665, 1689, 2082
EaeI	YGGCCR	4 cut(s)	1511, 2106, 2165, 2361
Eam1104I	CTCTTC	8 cut(s)	224, 445, 690, 847, 2145, 2549, 2693, 2831
EarI	CTCTTC	8 cut(s)	224, 445, 690, 847, 2145, 2549, 2693, 2831
EciI	GGCGGA	2 cut(s)	143, 187
Eco147I	AGGCCT	1 cut(s)	1866
Eco31I	GGTCTC	3 cut(s)	128, 311, 2926
Eco47I	GGWCC	1 cut(s)	770
Eco57I	CTGAAG	4 cut(s)	528, 1431, 2334, 2541
Eco81I	CCTNAGG	1 cut(s)	114
Eco88I	CYCGRG	1 cut(s)	2798
Eco91I	GGTNACC	1 cut(s)	562
EcoO65I	GGTNACC	1 cut(s)	562
EcoRI	GAATTC	1 cut(s)	2057
EcoRII	CCWGG	8 cut(s)	697, 835, 961, 1429, 1730, 1938, 2162, 2395
FalI	AAGNNNNNCTT	6 cut(s)	579, 611, 2286, 2318, 2690, 2722
FaqI	GGGAC	2 cut(s)	1482, 2005
FauI	CCCGC	1 cut(s)	62
FbaI	TGATCA	3 cut(s)	655, 1710, 1926
FblI	GTMKAC	1 cut(s)	261
FokI	GGATG	5 cut(s)	308, 1130, 1897, 2726, 2818
FspBI	CTAG	4 cut(s)	1862, 1868, 2339, 2372
FspI	TGCGCA	1 cut(s)	1617
GlaI	GCGC	6 cut(s)	205, 1081, 1097, 1509, 1617, 2175
GsuI	CTGGAG	4 cut(s)	925, 1802, 1920, 2886
HapII	CCGG	7 cut(s)	207, 239, 926, 1043, 1063, 2196, 2364
HhaI	GCGC	6 cut(s)	206, 1082, 1098, 1510, 1618, 2176
Hin6I	GCGC	6 cut(s)	204, 1080, 1096, 1508, 1616, 2174
HinP1I	GCGC	6 cut(s)	204, 1080, 1096, 1508, 1616, 2174
HincII	GTYRAC	6 cut(s)	262, 310, 640, 1344, 2023, 2089
HindII	GTYRAC	6 cut(s)	262, 310, 640, 1344, 2023, 2089
HpaI	GTTAAC	3 cut(s)	310, 2023, 2089
HpaII	CCGG	7 cut(s)	207, 239, 926, 1043, 1063, 2196, 2364
HphI	GGTGA	9 cut(s)	59, 620, 1544, 1720, 1975, 2218, 2464, 2471, 2604
Hpy188I	TCNGA	8 cut(s)	1294, 1450, 1603, 1647, 1668, 2141, 2268, 2383
Hpy188III	TCNNGA	7 cut(s)	248, 725, 904, 2035, 2054, 2405, 2800
Hpy99I	CGWCG	2 cut(s)	263, 266
HpyAV	CCTTC	7 cut(s)	214, 605, 862, 1352, 1522, 2309, 2758
HpyCH4III	ACNGT	9 cut(s)	47, 448, 644, 922, 1540, 1555, 2093, 2512, 2581
HpyCH4IV	ACGT	2 cut(s)	264, 392
HpyF3I	CTNAG	9 cut(s)	114, 499, 1004, 1175, 1278, 1644, 1665, 1689, 2082
HpySE526I	ACGT	2 cut(s)	264, 392
HspAI	GCGC	6 cut(s)	204, 1080, 1096, 1508, 1616, 2174
Ksp22I	TGATCA	3 cut(s)	655, 1710, 1926
KspAI	GTTAAC	3 cut(s)	310, 2023, 2089
KspI	CCGCGG	2 cut(s)	58, 83
LguI	GCTCTTC	2 cut(s)	445, 2693
LmnI	GCTCC	6 cut(s)	200, 845, 1015, 1663, 2867, 2941
LweI	GCATC	5 cut(s)	654, 1285, 1919, 2278, 2610
MabI	ACCWGGT	1 cut(s)	2395
MaeI	CTAG	4 cut(s)	1862, 1868, 2339, 2372
MaeII	ACGT	2 cut(s)	264, 392
MaeIII	GTNAC	3 cut(s)	562, 2452, 2459
MfeI	CAATTG	5 cut(s)	333, 2001, 2464, 2646, 2670
MflI	RGATCY	2 cut(s)	209, 2802
MhlI	GDGCHC	7 cut(s)	155, 270, 283, 1861, 1957, 2404, 2799
MlsI	TGGCCA	2 cut(s)	2108, 2167
MluNI	TGGCCA	2 cut(s)	2108, 2167
MlyI	GAGTC	5 cut(s)	167, 689, 1646, 1987, 2025
MmeI	TCCRAC	3 cut(s)	325, 1576, 2183
Mox20I	TGGCCA	2 cut(s)	2108, 2167
MroXI	GAANNNNTTC	1 cut(s)	2747
MscI	TGGCCA	2 cut(s)	2108, 2167
MseI	TTAA	9 cut(s)	309, 633, 935, 969, 1124, 1200, 2022, 2088, 2439
MslI	CAYNNNNRTG	7 cut(s)	143, 185, 726, 788, 1043, 1482, 2450
Msp20I	TGGCCA	2 cut(s)	2108, 2167
MspA1I	CMGCKG	4 cut(s)	57, 82, 556, 2081
MspI	CCGG	7 cut(s)	207, 239, 926, 1043, 1063, 2196, 2364
MspR9I	CCNGG	9 cut(s)	240, 699, 837, 963, 1431, 1732, 1940, 2164, 2397
MunI	CAATTG	5 cut(s)	333, 2001, 2464, 2646, 2670
MvaI	CCWGG	8 cut(s)	699, 837, 963, 1431, 1732, 1940, 2164, 2397
MvnI	CGCG	5 cut(s)	36, 57, 82, 314, 1510
NciI	CCSGG	1 cut(s)	240
NcoI	CCATGG	5 cut(s)	942, 1099, 1762, 1794, 2855
NlaIV	GGNNCC	3 cut(s)	154, 1323, 2804
NmuCI	GTSAC	2 cut(s)	2452, 2459
NsbI	TGCGCA	1 cut(s)	1617
NspI	RCATGY	1 cut(s)	429
NspV	TTCGAA	1 cut(s)	585
OliI	CACNNNNGTG	2 cut(s)	143, 1043
PagI	TCATGA	1 cut(s)	724
PasI	CCCWGGG	1 cut(s)	698
PceI	AGGCCT	1 cut(s)	1866
PciSI	GCTCTTC	2 cut(s)	445, 2693
PdmI	GAANNNNTTC	1 cut(s)	2747
Pfl23II	CGTACG	1 cut(s)	1624
PflMI	CCANNNNNTGG	2 cut(s)	842, 2837
PfoI	TCCNGGA	1 cut(s)	961
PinAI	ACCGGT	1 cut(s)	2195
PleI	GAGTC	5 cut(s)	166, 688, 1645, 1987, 2025
PpsI	GAGTC	5 cut(s)	166, 688, 1645, 1987, 2025
PsiI	TTATAA	2 cut(s)	1022, 2790
Psp6I	CCWGG	8 cut(s)	697, 835, 961, 1429, 1730, 1938, 2162, 2395
PspEI	GGTNACC	1 cut(s)	562
PspGI	CCWGG	8 cut(s)	697, 835, 961, 1429, 1730, 1938, 2162, 2395
PspLI	CGTACG	1 cut(s)	1624
PspN4I	GGNNCC	3 cut(s)	154, 1323, 2804
PspPI	GGNCC	2 cut(s)	487, 770
PstI	CTGCAG	1 cut(s)	2818
PstNI	CAGNNNCTG	1 cut(s)	2312
PsuI	RGATCY	2 cut(s)	209, 2802
PvuII	CAGCTG	2 cut(s)	556, 2081
RseI	CAYNNNNRTG	7 cut(s)	143, 185, 726, 788, 1043, 1482, 2450
SacII	CCGCGG	2 cut(s)	58, 83
SalI	GTCGAC	1 cut(s)	260
SapI	GCTCTTC	2 cut(s)	445, 2693
SaqAI	TTAA	9 cut(s)	309, 633, 935, 969, 1124, 1200, 2022, 2088, 2439
Sau96I	GGNCC	2 cut(s)	487, 770
ScaI	AGTACT	1 cut(s)	887
SchI	GAGTC	5 cut(s)	167, 689, 1646, 1987, 2025
ScrFI	CCNGG	9 cut(s)	240, 699, 837, 963, 1431, 1732, 1940, 2164, 2397
SduI	GDGCHC	7 cut(s)	155, 270, 283, 1861, 1957, 2404, 2799
SexAI	ACCWGGT	1 cut(s)	2395
SfaNI	GCATC	5 cut(s)	654, 1285, 1919, 2278, 2610
SfcI	CTRYAG	3 cut(s)	213, 889, 2814
Sfr303I	CCGCGG	2 cut(s)	58, 83
SfuI	TTCGAA	1 cut(s)	585
SgrBI	CCGCGG	2 cut(s)	58, 83
SgrDI	CGTCGACG	1 cut(s)	260
SinI	GGWCC	1 cut(s)	770
SmiMI	CAYNNNNRTG	7 cut(s)	143, 185, 726, 788, 1043, 1482, 2450
SmlI	CTYRAG	6 cut(s)	282, 674, 1265, 2403, 2423, 2954
SmoI	CTYRAG	6 cut(s)	282, 674, 1265, 2403, 2423, 2954
SseBI	AGGCCT	1 cut(s)	1866
SspMI	CTAG	4 cut(s)	1862, 1868, 2339, 2372
StuI	AGGCCT	1 cut(s)	1866
StyD4I	CCNGG	9 cut(s)	238, 697, 835, 961, 1429, 1730, 1938, 2162, 2395
TaaI	ACNGT	9 cut(s)	47, 448, 644, 922, 1540, 1555, 2093, 2512, 2581
TaiI	ACGT	2 cut(s)	267, 395
TaqI	TCGA	8 cut(s)	261, 585, 662, 2053, 2221, 2505, 2738, 2976
TatI	WGTACW	5 cut(s)	478, 885, 954, 1171, 1921
TauI	GCSGC	6 cut(s)	60, 63, 82, 85, 1513, 2078
Tru1I	TTAA	9 cut(s)	309, 633, 935, 969, 1124, 1200, 2022, 2088, 2439
Tru9I	TTAA	9 cut(s)	309, 633, 935, 969, 1124, 1200, 2022, 2088, 2439
TseFI	GTSAC	2 cut(s)	2452, 2459
Tsp45I	GTSAC	2 cut(s)	2452, 2459
TspGWI	ACGGA	2 cut(s)	166, 314
Van91I	CCANNNNNTGG	2 cut(s)	842, 2837
VneI	GTGCAC	1 cut(s)	1953
VpaK11BI	GGWCC	1 cut(s)	770
XapI	RAATTY	4 cut(s)	1757, 2057, 2135, 2479
XceI	RCATGY	1 cut(s)	429
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	1 cut(s)	2747
XspI	CTAG	4 cut(s)	1862, 1868, 2339, 2372
ZrmI	AGTACT	1 cut(s)	887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.