Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002025

Physical Location & Seq

Genomic Coordinates Reverse (-)

3344768 .. 3350591

Gene Structure 5824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0045700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGGCTGCGTCAGCTCGAAGCAGACGGTGTCGGTGACGCCGGCGTTCGACCACTCGGGGGCGTTCAGGGACAATGTCGGCAATTCGGGTCGGAGCCGGGTCGGGGAGGCGGTGGTGAAGAAGAAGGGGGGTGAGTTGAGTGGGAGCGAGTTGGGTGAGTCCGGGAGAGCGAGTTCGAATAAGAAGAAGAGTAATGGTTCCGAGTCGTTGAGTTTTCGGTTGAGTAATTTGCAGAGGTATGTGGAGGGGGAGCAGGTCGCCGCCGGTTGGCCGGCCTGGCTCAGCGCCGTCGCCGCAGAAGCCATTCAGGGCTGGGTCCCACTTCGGGCCGATGCCTTCGAGAAATTAGAGAAGATTGGACAGGGTACGTATAGTAGTGTGTTCCGAGCGCGTGACCTGGAGACTGGGAAGTTAGTTGCTTTGAAGAAGGTGCGGTTCGACAATTTTGAGCCTGAGAGCGTCAGGTTTATGGCCCGAGAAATCTTGATTCTCAGAAGGCTTGACCATCCAAATGTCATTAAATTGGAGGGTTTAATTACTTCCCGGTTGTCATGTAGCATATACCTTGTGTTTGAGTACATGGAACATGACATTACTGGACTCCTGTCTAACCCCGACATCAAGTTCAGTGAAGCACAGATTAAATGTTACATGAAGCAGCTGTTATCTGGACTTGAACATTGTCACTCGCGGGGTGTAATGCATCGCGACATAAAAGGATCAAATCTTCTGGTGAACAATGAAGGAATTTTGAAGATGGCTGATTTTGGATTGGCAAACTTCTGTGATTCTGGGCACAAGCAACCCCTTACCAGTCGGGTTGTCACTTTGTGGTATCGTCCTCCTGAACTTTTGCTTGGATCAACTGCCTATGGAGCTTATATCGATCTCTGGAGTGTTGGCTGTGCATTTGCAGAACTCCTGGTTGGGAAACCTGTTCTTCAAGGGCGAACAGAGGTTGAACAATTACACAAGATTTTCAAGCTCTGCGGCTCCCCACCGGAAGAATACTGGAAAAAGTCCAAACTTCCACATGCAACTCTATTTAAACCCCAACAACCTTATGATAGTACTCTGCAGGAGACCTTTAAAGATTTGCCAGCTGCCACTTTTAACCTACTAGGGACTCTTCTTTCTGTAGAACCGCACAAGCGTGGGACTGCCTCCTCTGCTCTTGCATCTGAGTATTTCAAAATGAAGCCTTATGCCTGTGATCCATCAAGCTTGCCAATTTACCCACCTAGCAAAGAGATTGACGCAAAAAATCGGGAGGAGGCAAAGAGGAAAAAGATTGGTGGTAGAATTCGTGGAGGCGAAACAAGAAAGTCAACAAGAAAATCACATGGAATAAGTAAATTGGCACCAGTCGAGGACTTGGCAACCCAAGTGCAAGATTCATATAAAATTAATGGCACTAATGGACGTATTACGAAGCAAGAAAATGGTGTCATAGGCAGGGAGTTGCCAAAGCCATCTGCTTCTAAAGCAGAAGAGGCTTCACATGTAAAGAATGCATCTCAAGGAGACATTCCCTTCTCTGGCCCATTAGAGGTTTCTACATCAAGTGGCTTCGCATGGGCAAAAAGACGACGAGATGATGCTTCTAGAAGATCTCATACTCGATCTATTTCAAAAGGACACATATTTAACACAGTAGAACCTTCAATTGCAGTGCATACAAGGAAGAACTTCGACTGTAAGACGCATGAAAATGGGGAATACAGAGGGCGTACTGACTCTAGAGGGCATGATTCATACGAGATTGTTAAGCTAGCAATGCTGAATCAATGGGGCAAGCTTGAACGTCCAGATTCCTTCGATGCTTCTGATGGGTATCACTCGCAGGAATTATCGAGGGCACTTTATCAGAGAGAGGAAAGGGTAGCTGCTACTAAAAGTGATCTGAGTTTTCCACTTGATGATGAAGAAGACAAGGTTGAATTTTCAGGACCCTTGTTATCTCAACCCTATAAAGTTGACGAATTCTTAGAAAGGCATGAGCGCCACATCAGAAGGGCAACGCGGAACTCCTGGTTCTATAGAGGTAAGAAGCAAGGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0008150 GO:0008324 GO:0009636 GO:0010035 GO:0010038 GO:0010273 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046688 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061687 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0097501 GO:0098655 GO:0098660 GO:0098662 GO:0098754 GO:0099131 GO:0099132 GO:1990169

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

687

Amino Acids

76.8

Weight (kDa)

9.28

Isoelectric Point (pI)

44.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	113 - 397	1.2e-64	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	115 - 326	9.7e-29	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63440
fragaria_vesca	FvH4_5g02090 FvH4_5g02090 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091
malus_domestica	MD06G1080800.v1.1 MD06G1080900.v1.1 MD14G1102600.v1.1
prunus_persica	Prupe.5G097900_v2.0.a1 Prupe.5G097900_v2.0.a1 Prupe.5G098000_v2.0.a1
pyrus_communis	pycom06g07780 pycom06g07790 pycom14g09890
rosa_chinensis	RchiOBHm_Chr7g0197781 RchiOBHm_Chr7g0198111 RchiOBHm_Chr7g0198141
rosa_laevigata	RLG00000003885 RLG00000003888 RLG00000019170
rosa_multiflora	Rmu_sc0000221.1_g000018 Rmu_sc0000221.1_g000030 Rmu_sc0006732.1_g000016
rosa_roxburghii	Rroxscaffold_3G00257940 Rroxscaffold_3G00257970 Rroxscaffold_3G00257990
rosa_rugosa	Rorug07G0045700 Rorug07G0045700 Rorug07G0045800 Rorug07G0045800 Rorug07G0045900
rosa_samantha	Rh7AG169100 Rh7AG169200 Rh7BG169900 Rh7BG172300 Rh7CG178600 Rh7CG178700 Rh7DG169200 Rh7DG171400 Rh7DG171800
rosa_wichuraiana	Rw7G014570 Rw7G014780 Rw7G014790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	244
AccB1I	GGYRCC	1 cut(s)	1360
AccII	CGCG	4 cut(s)	391, 691, 708, 2023
AciI	CCGC	8 cut(s)	110, 261, 294, 433, 691, 990, 1145, 2023
AclWI	GGATC	3 cut(s)	727, 868, 1208
AcoI	YGGCCR	1 cut(s)	269
AcsI	RAATTY	4 cut(s)	747, 1302, 1940, 1982
AcyI	GRCGYC	1 cut(s)	38
AdeI	CACNNNGTG	1 cut(s)	831
AfaI	GTAC	4 cut(s)	367, 578, 1072, 1732
AfiI	CCNNNNNNNGG	6 cut(s)	58, 103, 267, 325, 1538, 1549
AflIII	ACRYGT	1 cut(s)	1501
AjnI	CCWGG	4 cut(s)	275, 396, 921, 2030
AjuI	GAANNNNNNNTTGG	4 cut(s)	840, 872, 909, 941
AleI	CACNNNNGTG	1 cut(s)	1152
AloI	GAACNNNNNNTCC	2 cut(s)	157, 189
AluBI	AGCT	9 cut(s)	15, 661, 878, 985, 1103, 1224, 1771, 1798, 1886
AluI	AGCT	9 cut(s)	15, 661, 878, 985, 1103, 1224, 1771, 1798, 1886
Alw26I	GTCTC	3 cut(s)	395, 1076, 1518
AlwI	GGATC	3 cut(s)	727, 868, 1208
Ama87I	CYCGRG	2 cut(s)	55, 474
AoxI	GGCC	5 cut(s)	269, 273, 327, 471, 1540
ApeKI	GCWGC	4 cut(s)	6, 658, 1103, 1886
ApoI	RAATTY	4 cut(s)	747, 1302, 1940, 1982
AseI	ATTAAT	1 cut(s)	1407
Asp700I	GAANNNNTTC	2 cut(s)	303, 1688
AspLEI	GCGC	3 cut(s)	287, 391, 2004
AspS9I	GGNCC	5 cut(s)	316, 327, 472, 1541, 1949
AsuC2I	CCSGG	3 cut(s)	98, 163, 544
AsuHPI	GGTGA	5 cut(s)	46, 127, 143, 167, 745
AsuII	TTCGAA	1 cut(s)	176
AsuNHI	GCTAGC	1 cut(s)	1771
AvaI	CYCGRG	2 cut(s)	55, 474
AvaII	GGWCC	2 cut(s)	316, 1949
BaeGI	GKGCMC	2 cut(s)	798, 1861
BanI	GGYRCC	1 cut(s)	1360
BarI	GAAGNNNNNNTAC	2 cut(s)	1600, 1632
BbsI	GAAGAC	1 cut(s)	1935
BbvI	GCAGC	3 cut(s)	670, 1090, 1873
BccI	CCATC	5 cut(s)	513, 751, 1225, 1480, 1823
BceAI	ACGGC	1 cut(s)	272
BciT130I	CCWGG	4 cut(s)	277, 398, 923, 2032
BcnI	CCSGG	3 cut(s)	98, 163, 544
BcoDI	GTCTC	3 cut(s)	395, 1076, 1518
BfaI	CTAG	5 cut(s)	1121, 1242, 1605, 1740, 1772
BfmI	CTRYAG	3 cut(s)	1076, 1137, 2038
BfoI	RGCGCY	2 cut(s)	288, 2005
BfuAI	ACCTGC	1 cut(s)	244
BglI	GCCNNNNNGGC	1 cut(s)	277
BglII	AGATCT	1 cut(s)	1610
BisI	GCNGC	7 cut(s)	7, 261, 294, 659, 991, 1104, 1887
BlpI	GCTNAGC	1 cut(s)	281
BlsI	GCNGC	7 cut(s)	8, 262, 295, 660, 992, 1105, 1888
BmcAI	AGTACT	1 cut(s)	1072
Bme1390I	CCNGG	7 cut(s)	98, 163, 277, 398, 544, 923, 2032
Bme18I	GGWCC	2 cut(s)	316, 1949
BmeT110I	CYCGRG	2 cut(s)	55, 474
BmgT120I	GGNCC	5 cut(s)	316, 327, 472, 1541, 1949
BmiI	GGNNCC	7 cut(s)	95, 199, 317, 318, 994, 1362, 1951
BmrFI	CCNGG	7 cut(s)	98, 163, 277, 398, 544, 923, 2032
BmrI	ACTGGG	1 cut(s)	414
BmsI	GCATC	6 cut(s)	322, 712, 1187, 1523, 1588, 1810
BmtI	GCTAGC	1 cut(s)	1775
BmuI	ACTGGG	1 cut(s)	414
BoxI	GACNNNNGTC	1 cut(s)	604
BpiI	GAAGAC	1 cut(s)	1935
BpmI	CTGGAG	2 cut(s)	419, 913
Bpu1102I	GCTNAGC	1 cut(s)	281
Bpu14I	TTCGAA	1 cut(s)	176
BpuEI	CTTGAG	1 cut(s)	1503
BpuMI	CCSGG	3 cut(s)	98, 163, 544
Bsa29I	ATCGAT	1 cut(s)	885
BsaAI	YACGTR	1 cut(s)	369
BsaBI	GATNNNNATC	1 cut(s)	1833
BsaHI	GRCGYC	1 cut(s)	38
BsaI	GGTCTC	1 cut(s)	1076
BsaWI	WCCGGW	1 cut(s)	1000
BsaXI	ACNNNNNCTCC	2 cut(s)	157, 187
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 103, 267, 325, 1538, 1549
Bse118I	RCCGGY	3 cut(s)	40, 263, 271
Bse1I	ACTGG	5 cut(s)	409, 601, 813, 1016, 1364
Bse3DI	GCAATG	1 cut(s)	1782
Bse8I	GATNNNNATC	1 cut(s)	1833
BseBI	CCWGG	4 cut(s)	277, 398, 923, 2032
BseCI	ATCGAT	1 cut(s)	885
BseGI	GGATG	1 cut(s)	505
BseJI	GATNNNNATC	1 cut(s)	1833
BseLI	CCNNNNNNNGG	6 cut(s)	58, 103, 267, 325, 1538, 1549
BseMI	GCAATG	1 cut(s)	1782
BseMII	CTCAG	5 cut(s)	295, 444, 505, 1173, 1895
BseNI	ACTGG	5 cut(s)	409, 601, 813, 1016, 1364
BseRI	GAGGAG	2 cut(s)	1156, 1286
BseSI	GKGCMC	2 cut(s)	798, 1861
BseXI	GCAGC	3 cut(s)	670, 1090, 1873
BseYI	CCCAGC	1 cut(s)	312
Bsh1236I	CGCG	4 cut(s)	391, 691, 708, 2023
BshFI	GGCC	5 cut(s)	271, 275, 329, 473, 1542
BshNI	GGYRCC	1 cut(s)	1360
BshVI	ATCGAT	1 cut(s)	885
BsiHKCI	CYCGRG	2 cut(s)	55, 474
BsiSI	CCGG	7 cut(s)	41, 97, 162, 264, 272, 544, 1001
BslFI	GGGAC	4 cut(s)	83, 302, 1138, 1171
BslI	CCNNNNNNNGG	6 cut(s)	58, 103, 267, 325, 1538, 1549
BsmAI	GTCTC	3 cut(s)	395, 1076, 1518
BsmFI	GGGAC	4 cut(s)	83, 302, 1138, 1171
BsmI	GAATGC	1 cut(s)	1516
BsnI	GGCC	5 cut(s)	271, 275, 329, 473, 1542
Bso31I	GGTCTC	1 cut(s)	1076
BsoBI	CYCGRG	2 cut(s)	55, 474
Bsp119I	TTCGAA	1 cut(s)	176
Bsp1286I	GDGCHC	2 cut(s)	798, 1861
Bsp143I	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
Bsp1720I	GCTNAGC	1 cut(s)	281
Bsp68I	TCGCGA	1 cut(s)	708
BspACI	CCGC	8 cut(s)	110, 261, 294, 433, 691, 990, 1145, 2023
BspANI	GGCC	5 cut(s)	271, 275, 329, 473, 1542
BspCNI	CTCAG	5 cut(s)	294, 445, 504, 1174, 1896
BspDI	ATCGAT	1 cut(s)	885
BspFNI	CGCG	4 cut(s)	391, 691, 708, 2023
BspLI	GGNNCC	7 cut(s)	95, 199, 317, 318, 994, 1362, 1951
BspMAI	CTGCAG	1 cut(s)	1080
BspMI	ACCTGC	1 cut(s)	244
BspOI	GCTAGC	1 cut(s)	1775
BspPI	GGATC	3 cut(s)	727, 868, 1208
BspT104I	TTCGAA	1 cut(s)	176
BspT107I	GGYRCC	1 cut(s)	1360
BspTNI	GGTCTC	1 cut(s)	1076
BsrDI	GCAATG	1 cut(s)	1782
BsrFI	RCCGGY	3 cut(s)	40, 263, 271
BsrI	ACTGG	5 cut(s)	409, 601, 813, 1016, 1364
BssAI	RCCGGY	3 cut(s)	40, 263, 271
BssMI	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
BssNI	GRCGYC	1 cut(s)	38
Bst2UI	CCWGG	4 cut(s)	277, 398, 923, 2032
Bst4CI	ACNGT	3 cut(s)	28, 1654, 1697
Bst6I	CTCTTC	3 cut(s)	182, 1134, 1485
BstACI	GRCGYC	1 cut(s)	38
BstBAI	YACGTR	1 cut(s)	369
BstBI	TTCGAA	1 cut(s)	176
BstC8I	GCNNGC	6 cut(s)	42, 273, 1101, 1226, 1773, 1796
BstDEI	CTNAG	6 cut(s)	281, 453, 491, 1182, 1904, 1987
BstF5I	GGATG	1 cut(s)	505
BstFNI	CGCG	4 cut(s)	391, 691, 708, 2023
BstH2I	RGCGCY	2 cut(s)	288, 2005
BstHHI	GCGC	3 cut(s)	287, 391, 2004
BstKTI	GATC	7 cut(s)	722, 863, 889, 1216, 1613, 1625, 1903
BstMAI	GTCTC	3 cut(s)	395, 1076, 1518
BstMBI	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
BstMWI	GCNNNNNNNGC	9 cut(s)	12, 277, 293, 299, 875, 1169, 1484, 1493, 1777
BstNI	CCWGG	4 cut(s)	277, 398, 923, 2032
BstNSI	RCATGY	2 cut(s)	1037, 1505
BstPAI	GACNNNNGTC	1 cut(s)	604
BstSCI	CCNGG	7 cut(s)	96, 161, 275, 396, 542, 921, 2030
BstSFI	CTRYAG	3 cut(s)	1076, 1137, 2038
BstSLI	GKGCMC	2 cut(s)	798, 1861
BstSNI	TACGTA	1 cut(s)	369
BstUI	CGCG	4 cut(s)	391, 691, 708, 2023
BstV1I	GCAGC	3 cut(s)	670, 1090, 1873
BstV2I	GAAGAC	1 cut(s)	1935
BstX2I	RGATCY	1 cut(s)	1610
BstYI	RGATCY	1 cut(s)	1610
Bsu15I	ATCGAT	1 cut(s)	885
BsuRI	GGCC	5 cut(s)	271, 275, 329, 473, 1542
BsuTUI	ATCGAT	1 cut(s)	885
BtgZI	GCGATG	1 cut(s)	689
BtsCI	GGATG	1 cut(s)	505
BtsI	GCAGTG	1 cut(s)	1677
BtsIMutI	CAGTG	2 cut(s)	634, 1677
BtuMI	TCGCGA	1 cut(s)	708
BveI	ACCTGC	1 cut(s)	244
Cac8I	GCNNGC	6 cut(s)	42, 273, 1101, 1226, 1773, 1796
CfoI	GCGC	3 cut(s)	287, 391, 2004
Cfr10I	RCCGGY	3 cut(s)	40, 263, 271
Cfr13I	GGNCC	5 cut(s)	316, 327, 472, 1541, 1949
ClaI	ATCGAT	1 cut(s)	885
CseI	GACGC	4 cut(s)	46, 448, 1265, 1711
Csp6I	GTAC	4 cut(s)	366, 577, 1071, 1731
CviQI	GTAC	4 cut(s)	366, 577, 1071, 1731
DdeI	CTNAG	6 cut(s)	281, 453, 491, 1182, 1904, 1987
DpnI	GATC	7 cut(s)	721, 862, 888, 1215, 1612, 1624, 1902
DpnII	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
DraI	TTTAAA	2 cut(s)	1048, 1090
DraIII	CACNNNGTG	1 cut(s)	831
EaeI	YGGCCR	1 cut(s)	269
Eam1104I	CTCTTC	3 cut(s)	182, 1134, 1485
EarI	CTCTTC	3 cut(s)	182, 1134, 1485
Eco105I	TACGTA	1 cut(s)	369
Eco31I	GGTCTC	1 cut(s)	1076
Eco47I	GGWCC	2 cut(s)	316, 1949
Eco88I	CYCGRG	2 cut(s)	55, 474
EcoO109I	RGGNCCY	2 cut(s)	316, 1949
EcoRI	GAATTC	2 cut(s)	1302, 1982
EcoRII	CCWGG	4 cut(s)	275, 396, 921, 2030
EcoT22I	ATGCAT	2 cut(s)	705, 1516
FaqI	GGGAC	4 cut(s)	83, 302, 1138, 1171
FauI	CCCGC	1 cut(s)	684
Fnu4HI	GCNGC	7 cut(s)	7, 261, 294, 659, 991, 1104, 1887
FokI	GGATG	1 cut(s)	492
FseI	GGCCGGCC	1 cut(s)	275
Fsp4HI	GCNGC	7 cut(s)	7, 261, 294, 659, 991, 1104, 1887
FspBI	CTAG	5 cut(s)	1121, 1242, 1605, 1740, 1772
GlaI	GCGC	3 cut(s)	286, 390, 2003
GluI	GCNGC	7 cut(s)	7, 261, 294, 659, 991, 1104, 1887
GsaI	CCCAGC	1 cut(s)	316
GsuI	CTGGAG	2 cut(s)	419, 913
HaeII	RGCGCY	2 cut(s)	288, 2005
HaeIII	GGCC	5 cut(s)	271, 275, 329, 473, 1542
HapII	CCGG	7 cut(s)	41, 97, 162, 264, 272, 544, 1001
HgaI	GACGC	4 cut(s)	46, 448, 1265, 1711
HhaI	GCGC	3 cut(s)	287, 391, 2004
Hin1I	GRCGYC	1 cut(s)	38
Hin6I	GCGC	3 cut(s)	285, 389, 2002
HinP1I	GCGC	3 cut(s)	285, 389, 2002
HincII	GTYRAC	2 cut(s)	1329, 1978
HindII	GTYRAC	2 cut(s)	1329, 1978
HindIII	AAGCTT	2 cut(s)	1222, 1796
HpaII	CCGG	7 cut(s)	41, 97, 162, 264, 272, 544, 1001
HphI	GGTGA	5 cut(s)	46, 127, 143, 167, 745
Hpy166II	GTNNAC	3 cut(s)	736, 1329, 1978
Hpy188I	TCNGA	9 cut(s)	93, 202, 386, 494, 1183, 1828, 1869, 1905, 2012
Hpy8I	GTNNAC	3 cut(s)	736, 1329, 1978
Hpy99I	CGWCG	2 cut(s)	293, 1593
HpyAV	CCTTC	9 cut(s)	118, 346, 421, 489, 737, 1543, 1671, 1825, 2007
HpyCH4III	ACNGT	3 cut(s)	28, 1654, 1697
HpyCH4IV	ACGT	3 cut(s)	368, 1423, 1804
HpyF10VI	GCNNNNNNNGC	9 cut(s)	12, 277, 293, 299, 875, 1169, 1484, 1493, 1777
HpyF3I	CTNAG	6 cut(s)	281, 453, 491, 1182, 1904, 1987
HpySE526I	ACGT	3 cut(s)	368, 1423, 1804
Hsp92I	GRCGYC	1 cut(s)	38
HspAI	GCGC	3 cut(s)	285, 389, 2002
KflI	GGGWCCC	1 cut(s)	316
KroI	GCCGGC	2 cut(s)	40, 271
KroNI	GCCGGC	2 cut(s)	42, 273
Kzo9I	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
LmnI	GCTCC	5 cut(s)	93, 144, 250, 875, 998
Lsp1109I	GCAGC	3 cut(s)	670, 1090, 1873
LweI	GCATC	6 cut(s)	322, 712, 1187, 1523, 1588, 1810
MaeI	CTAG	5 cut(s)	1121, 1242, 1605, 1740, 1772
MaeII	ACGT	3 cut(s)	368, 1423, 1804
MaeIII	GTNAC	5 cut(s)	34, 392, 647, 683, 823
MalI	GATC	7 cut(s)	721, 862, 888, 1215, 1612, 1624, 1902
MboI	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
MfeI	CAATTG	1 cut(s)	1665
MflI	RGATCY	1 cut(s)	1610
MhlI	GDGCHC	2 cut(s)	798, 1861
MlyI	GAGTC	5 cut(s)	167, 212, 594, 1120, 1730
MmeI	TCCRAC	1 cut(s)	71
Mph1103I	ATGCAT	2 cut(s)	705, 1516
MreI	CGCCGGCG	1 cut(s)	40
MroNI	GCCGGC	2 cut(s)	40, 271
MroXI	GAANNNNTTC	2 cut(s)	303, 1688
MseI	TTAA	9 cut(s)	519, 533, 642, 1047, 1089, 1113, 1407, 1647, 1767
MslI	CAYNNNNRTG	3 cut(s)	510, 1152, 1710
MspA1I	CMGCKG	2 cut(s)	661, 1103
MspI	CCGG	7 cut(s)	41, 97, 162, 264, 272, 544, 1001
MspR9I	CCNGG	7 cut(s)	98, 163, 277, 398, 544, 923, 2032
MunI	CAATTG	1 cut(s)	1665
Mva1269I	GAATGC	1 cut(s)	1516
MvaI	CCWGG	4 cut(s)	277, 398, 923, 2032
MvnI	CGCG	4 cut(s)	391, 691, 708, 2023
MwoI	GCNNNNNNNGC	9 cut(s)	12, 277, 293, 299, 875, 1169, 1484, 1493, 1777
NaeI	GCCGGC	2 cut(s)	42, 273
NciI	CCSGG	3 cut(s)	98, 163, 544
NdeII	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
NgoMIV	GCCGGC	2 cut(s)	40, 271
NheI	GCTAGC	1 cut(s)	1771
NlaIV	GGNNCC	7 cut(s)	95, 199, 317, 318, 994, 1362, 1951
NmuCI	GTSAC	4 cut(s)	34, 392, 683, 823
NruI	TCGCGA	1 cut(s)	708
NsiI	ATGCAT	2 cut(s)	705, 1516
NspI	RCATGY	2 cut(s)	1037, 1505
NspV	TTCGAA	1 cut(s)	176
OliI	CACNNNNGTG	1 cut(s)	1152
PciI	ACATGT	1 cut(s)	1501
PctI	GAATGC	1 cut(s)	1516
PdiI	GCCGGC	2 cut(s)	42, 273
PdmI	GAANNNNTTC	2 cut(s)	303, 1688
PfeI	GAWTC	6 cut(s)	487, 788, 1394, 1751, 1783, 1811
PflFI	GACNNNGTC	2 cut(s)	28, 74
PfoI	TCCNGGA	1 cut(s)	161
PkrI	GCNGC	7 cut(s)	8, 262, 295, 660, 992, 1105, 1888
PleI	GAGTC	5 cut(s)	166, 211, 594, 1120, 1730
PpsI	GAGTC	5 cut(s)	166, 211, 594, 1120, 1730
Ppu21I	YACGTR	1 cut(s)	369
PpuMI	RGGWCCY	2 cut(s)	316, 1949
PscI	ACATGT	1 cut(s)	1501
PshAI	GACNNNNGTC	1 cut(s)	604
PshBI	ATTAAT	1 cut(s)	1407
Psp5II	RGGWCCY	2 cut(s)	316, 1949
Psp6I	CCWGG	4 cut(s)	275, 396, 921, 2030
PspFI	CCCAGC	1 cut(s)	312
PspGI	CCWGG	4 cut(s)	275, 396, 921, 2030
PspN4I	GGNNCC	7 cut(s)	95, 199, 317, 318, 994, 1362, 1951
PspPI	GGNCC	5 cut(s)	316, 327, 472, 1541, 1949
PspPPI	RGGWCCY	2 cut(s)	316, 1949
PstI	CTGCAG	1 cut(s)	1080
PsuI	RGATCY	1 cut(s)	1610
PsyI	GACNNNGTC	2 cut(s)	28, 74
PvuII	CAGCTG	2 cut(s)	661, 1103
RigI	GGCCGGCC	1 cut(s)	275
RruI	TCGCGA	1 cut(s)	708
RsaI	GTAC	4 cut(s)	367, 578, 1072, 1732
RsaNI	GTAC	4 cut(s)	366, 577, 1071, 1731
RseI	CAYNNNNRTG	3 cut(s)	510, 1152, 1710
SaqAI	TTAA	9 cut(s)	519, 533, 642, 1047, 1089, 1113, 1407, 1647, 1767
SatI	GCNGC	7 cut(s)	7, 261, 294, 659, 991, 1104, 1887
Sau3AI	GATC	7 cut(s)	719, 860, 886, 1213, 1610, 1622, 1900
Sau96I	GGNCC	5 cut(s)	316, 327, 472, 1541, 1949
ScaI	AGTACT	1 cut(s)	1072
SchI	GAGTC	5 cut(s)	167, 212, 594, 1120, 1730
ScrFI	CCNGG	7 cut(s)	98, 163, 277, 398, 544, 923, 2032
SduI	GDGCHC	2 cut(s)	798, 1861
SfaNI	GCATC	6 cut(s)	322, 712, 1187, 1523, 1588, 1810
SfcI	CTRYAG	3 cut(s)	1076, 1137, 2038
SfuI	TTCGAA	1 cut(s)	176
SgrAI	CRCCGGYG	1 cut(s)	40
SinI	GGWCC	2 cut(s)	316, 1949
SmiMI	CAYNNNNRTG	3 cut(s)	510, 1152, 1710
SmlI	CTYRAG	1 cut(s)	1518
SmoI	CTYRAG	1 cut(s)	1518
SnaBI	TACGTA	1 cut(s)	369
SsiI	CCGC	8 cut(s)	110, 261, 294, 433, 691, 990, 1145, 2023
SspMI	CTAG	5 cut(s)	1121, 1242, 1605, 1740, 1772
StyD4I	CCNGG	7 cut(s)	96, 161, 275, 396, 542, 921, 2030
TaaI	ACNGT	3 cut(s)	28, 1654, 1697
TaiI	ACGT	3 cut(s)	371, 1426, 1807
TatI	WGTACW	2 cut(s)	576, 1070
TauI	GCSGC	3 cut(s)	263, 296, 993
TfiI	GAWTC	6 cut(s)	487, 788, 1394, 1751, 1783, 1811
Tru1I	TTAA	9 cut(s)	519, 533, 642, 1047, 1089, 1113, 1407, 1647, 1767
Tru9I	TTAA	9 cut(s)	519, 533, 642, 1047, 1089, 1113, 1407, 1647, 1767
TscAI	CASTG	2 cut(s)	634, 1677
TseFI	GTSAC	4 cut(s)	34, 392, 683, 823
TseI	GCWGC	4 cut(s)	6, 658, 1103, 1886
Tsp45I	GTSAC	4 cut(s)	34, 392, 683, 823
TspDTI	ATGAA	7 cut(s)	668, 756, 1211, 1386, 1722, 1743, 1938
TspRI	CASTG	2 cut(s)	634, 1677
Tth111I	GACNNNGTC	2 cut(s)	28, 74
VpaK11BI	GGWCC	2 cut(s)	316, 1949
VspI	ATTAAT	1 cut(s)	1407
XapI	RAATTY	4 cut(s)	747, 1302, 1940, 1982
XbaI	TCTAGA	2 cut(s)	1604, 1739
XceI	RCATGY	2 cut(s)	1037, 1505
XmnI	GAANNNNTTC	2 cut(s)	303, 1688
XspI	CTAG	5 cut(s)	1121, 1242, 1605, 1740, 1772
ZrmI	AGTACT	1 cut(s)	1072
Zsp2I	ATGCAT	2 cut(s)	705, 1516

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.