Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0002025

Physical Location & Seq

Genomic Coordinates Reverse (-)

15136371 .. 15139486

Gene Structure 3116 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG169200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGACTTGCACTTCTTGCTCTTCCACTGTTGAATCAGCTTTGCAGGTAGTTCATGGTGTACAAAAAGCCCAAGTTGCCTTAGCAACTGAAGAAGCAGATGTCCACTATGATCCAAAGATAGTGAGCTGCAATCAGCTGATGGTAGCCATTGAAGACGCTGGATTCGAATCCATACTTATTAATTCAGGTGAAGATCTTAAAGTTGACGCCAGATATACAGGGCCCCGAAATTTCATCAATGTGATTGAAACAACTGGATCCAGGCGTTTCAGGGCAAAAATTTATCCAGGCGGTGGAGCAGGAAGAGAAAATCATAGGAAGGAGGAAATTCAGCAGTACTACAGAGTCTTTCTCTGGAGTTTGATTTTCACCATTCCAGTATTTTTAACCTCCATGGTCTTCATGTACATCCCTGGACTTAAGCATGGCTTAGACAAGAAAGTAGTAAATATGCTCAGCATTGGGGAGCTTGTAAGGTGGATTCTGTCTACTCCGGTGCAGTTCATCATAGGCTGGAGGTTCTATACTGGGGCATACAAGTCATTGCGCCATGGTTCTGCTAATATGGATGTGTTAATTGCCTTGGGAACAAATGCAGCATATTTCTATTCAGTCTACTCCGTACTGAGAGCTGCCACCTCCCCACATTTTAAGGGTACAGATTTCTTTGAGACTAGTGCAATGCTAATCTCATTCATTCTCTTAGGGAAGTACCTAGAGGTGTTAGCGAAGGGGAAGACAACTGATGCTATTGCCAAAATGATGGATTTGGCACCTGAAACAGCCACTTTGTTGACTCTAGACGAAGAAGGAAACATTTTAGGTGAAGAAGAAATTGATGGTCGGTTGATACAAAAGAACCATGTCATCAAAATTATTCCAGGGGCGAAGGTAGCATCGGATGGTTATGTGATATGGGGACAAAGCCATGTAAATGAGAGTATGATAACAGGAGAAGCGCGTCCAGTGGCAAAAAGGAAGGGTGATACAGTCATTGGAGGTACTGTAAATGAAAATGGTGTGTTGCATATCAAGGCAACACGGGTTGGATCAGAAAGTTCCCTCGCGCAGATTGTACGGCTTGTTGAGTCAGCTCAGATGGCCAAAGCTCCTGTTCAGAAGTTTGCTGACCGCATTTCTAAATTCTTTGTGCCACTGTTTTTGGCTGGAAAATTCCATGGCTACCCAAAATCTTGGATACCGAAGTCCATGGATAGCTTTCAGCTTGCTCTCCAGTTTGGGATCTGTGTCATGGTTATTGCGTGCCCTTGTGCTCTAGGCCTAGCAACTCCTACTGCTGTCATGGTTGGTACTGGAGTCGGTGCATCCCAAGGTGTACTGATCAAAGGAGGTCAAGCATTAGAAAGTGCACATACGGTGGACTGCATTGTGTTCGACAAGACAGGGACACTTACAATTGGGAAGCCACTGGTTGTTAACACACGACTCCTGAAAAATATGGTGCTTCAAGAATTCTATGAACTTGTTGCTGCAGCAGAGGATGAACACCCCTTGGCCAAGGCCATTGTTGAGTATGCCAAAAAATTCAGAGAAGATGAAGAGAATCCAGCCGGGCCAGAAGCGCATGACTTTGCCTCCATTACTTGTCACAGGGTGAAGGCTATTGTTCGGGGCAGGGAAATAATTGTGGGGAACAAGAGCTTGATGGTGGACCAGAACATTGCAGTTCCACTTGATGCAGAAGACTACCCAGCAGAAGCTGAAGGGCTGGCTCAAACTGGAATTCTAGTAGCCATAGATGGAGAAGTAGCCGGAGTTCTAGCAGTATCTGATCCACTGAAACCAGGTGCTCAAGAAGTAATTACCATACTCAAGTCAATGAATGTTAGAAGCATAATGGTGACAGGTGACAATTGGGGAACTGCAAATTCTATTGCCAATGGAGTTGGTATTGATACTGTTATAGCCGAATCGAAACCTGACCAGAAAGCAGATAAAGTGAAGGAATTGCAGGCTTCAGGCTACACTGTGGCGACGGAGGGATATGGCATCAATGACTCACCAGCACTTGTGGCGGCAGATGTAGGAATGGCAATTGGTGCTGGCACTGACATTGCAATTGAGGCAGCAGACATTGTGCTAATGAAGAGCAACTTGGAGGATGTGATAACTGACATTGATCTTTCAAGGAAAACCTTCACCCATATTCGTTTGAACTATATTTGGGCTTTGGGATATAATGTGCTCGGGATCCCAATAGCTGCAGGAGTTCTCTTCCCATCCACTGGATTTCTCTTACCCCCTTGGATTGCTGGAGCTGCAATGGCTGCTTCTTCTGTCAGTGTTGTTTGCTGTTCATTGTTGTTGAAGAACTATAAGAGACCCAAGGAGCTGAATAACCTTGAGGTGCGTGGAATAGTGATCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0008150 GO:0008324 GO:0009636 GO:0010035 GO:0010038 GO:0010273 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046688 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061687 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0097501 GO:0098655 GO:0098660 GO:0098662 GO:0098754 GO:0099131 GO:0099132 GO:1990169

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

796

Amino Acids

85.88

Weight (kDa)

5.85

Isoelectric Point (pI)

29.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMA	PF00403	1 - 56	9.7e-10	Heavy-metal-associated domain
E1-E2_ATPase	PF00122	257 - 363	3.9e-22	P-type ATPase actuator domain
Hydrolase	PF00702	460 - 681	4.5e-26	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63440
fragaria_vesca	FvH4_5g02090 FvH4_5g02090 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091
malus_domestica	MD06G1080800.v1.1 MD06G1080900.v1.1 MD14G1102600.v1.1
prunus_persica	Prupe.5G097900_v2.0.a1 Prupe.5G097900_v2.0.a1 Prupe.5G098000_v2.0.a1
pyrus_communis	pycom06g07780 pycom06g07790 pycom14g09890
rosa_chinensis	RchiOBHm_Chr7g0197781 RchiOBHm_Chr7g0198111 RchiOBHm_Chr7g0198141
rosa_laevigata	RLG00000003885 RLG00000003888 RLG00000019170
rosa_multiflora	Rmu_sc0000221.1_g000018 Rmu_sc0000221.1_g000030 Rmu_sc0006732.1_g000016
rosa_roxburghii	Rroxscaffold_3G00257940 Rroxscaffold_3G00257970 Rroxscaffold_3G00257990
rosa_rugosa	Rorug07G0045700 Rorug07G0045700 Rorug07G0045800 Rorug07G0045800 Rorug07G0045900
rosa_samantha	Rh7AG169100 Rh7AG169200 Rh7BG169900 Rh7BG172300 Rh7CG178600 Rh7CG178700 Rh7DG169200 Rh7DG171400 Rh7DG171800
rosa_wichuraiana	Rw7G014570 Rw7G014780 Rw7G014790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	34
AccB1I	GGYRCC	1 cut(s)	772
AccB7I	CCANNNNNTGG	2 cut(s)	293, 2246
AccI	GTMKAC	2 cut(s)	488, 615
AccII	CGCG	2 cut(s)	961, 1067
AciI	CCGC	3 cut(s)	291, 1132, 2036
AclWI	GGATC	8 cut(s)	104, 252, 265, 1057, 1250, 1787, 2206, 2219
AcoI	YGGCCR	2 cut(s)	1101, 1515
AcsI	RAATTY	9 cut(s)	229, 279, 327, 1142, 1172, 1472, 1544, 1743, 1888
AcuI	CTGAAG	3 cut(s)	108, 1743, 1962
AcyI	GRCGYC	1 cut(s)	207
AdeI	CACNNNGTG	1 cut(s)	1615
AfiI	CCNNNNNNNGG	2 cut(s)	293, 2246
AflII	CTTAAG	1 cut(s)	419
AgsI	TTSAA	7 cut(s)	32, 152, 248, 1469, 2148, 2176, 2329
AhlI	ACTAGT	1 cut(s)	674
AjnI	CCWGG	5 cut(s)	260, 286, 412, 880, 1804
AjuI	GAANNNNNNNTTGG	2 cut(s)	2099, 2131
Alw21I	GWGCWC	4 cut(s)	1276, 1372, 1813, 2208
Alw26I	GTCTC	2 cut(s)	665, 2335
Alw44I	GTGCAC	1 cut(s)	1368
AlwI	GGATC	8 cut(s)	104, 252, 265, 1057, 1250, 1787, 2206, 2219
AlwNI	CAGNNNCTG	2 cut(s)	1721, 1790
Ama87I	CYCGRG	1 cut(s)	2207
AoxI	GGCC	6 cut(s)	221, 1101, 1279, 1515, 1521, 1574
ApaI	GGGCCC	1 cut(s)	225
ApaLI	GTGCAC	1 cut(s)	1368
ApeKI	GCWGC	9 cut(s)	126, 596, 632, 1490, 1493, 2087, 2222, 2279, 2288
ApoI	RAATTY	9 cut(s)	229, 279, 327, 1142, 1172, 1472, 1544, 1743, 1888
ArsI	GACNNNNNNTTYG	2 cut(s)	146, 178
AseI	ATTAAT	1 cut(s)	180
Asp700I	GAANNNNTTC	1 cut(s)	2156
AspLEI	GCGC	4 cut(s)	549, 961, 1069, 1585
AspS9I	GGNCC	4 cut(s)	221, 222, 1574, 1672
AsuC2I	CCSGG	1 cut(s)	1573
AsuHPI	GGTGA	9 cut(s)	200, 361, 836, 995, 1627, 1873, 1880, 2013, 2152
AsuII	TTCGAA	1 cut(s)	165
AvaI	CYCGRG	1 cut(s)	2207
AvaII	GGWCC	1 cut(s)	1672
BaeGI	GKGCMC	3 cut(s)	225, 1268, 1372
BaeI	ACNNNNGTAYC	4 cut(s)	1190, 1223, 1302, 1335
BalI	TGGCCA	2 cut(s)	1103, 1517
BamHI	GGATCC	2 cut(s)	257, 2211
BanI	GGYRCC	1 cut(s)	772
BanII	GRGCYC	1 cut(s)	225
BbsI	GAAGAC	4 cut(s)	159, 391, 743, 1710
Bbv12I	GWGCWC	4 cut(s)	1276, 1372, 1813, 2208
BbvI	GCAGC	9 cut(s)	113, 608, 619, 1477, 1505, 2099, 2209, 2266, 2275
BccI	CCATC	8 cut(s)	133, 757, 833, 896, 1093, 1660, 1754, 2248
BceAI	ACGGC	1 cut(s)	1094
BcgI	CGANNNNNNTGC	2 cut(s)	1375, 1409
BciT130I	CCWGG	5 cut(s)	262, 288, 414, 882, 1806
BciVI	GTATCC	1 cut(s)	1191
BclI	TGATCA	1 cut(s)	1341
BcnI	CCSGG	1 cut(s)	1573
BcoDI	GTCTC	2 cut(s)	665, 2335
BcuI	ACTAGT	1 cut(s)	674
BfaI	CTAG	7 cut(s)	675, 716, 800, 1277, 1283, 1748, 1781
BfmI	CTRYAG	3 cut(s)	340, 1491, 2223
BfrI	CTTAAG	1 cut(s)	419
BfuAI	ACCTGC	1 cut(s)	34
BfuI	GTATCC	1 cut(s)	1191
BglII	AGATCT	1 cut(s)	193
BlpI	GCTNAGC	1 cut(s)	455
BmcAI	AGTACT	1 cut(s)	338
Bme1390I	CCNGG	6 cut(s)	262, 288, 414, 882, 1573, 1806
Bme18I	GGWCC	1 cut(s)	1672
BmeT110I	CYCGRG	1 cut(s)	2207
BmgT120I	GGNCC	4 cut(s)	221, 222, 1574, 1672
BmiI	GGNNCC	5 cut(s)	223, 224, 259, 774, 2213
BmrFI	CCNGG	6 cut(s)	262, 288, 414, 882, 1573, 1806
BmrI	ACTGGG	1 cut(s)	537
BmsI	GCATC	5 cut(s)	736, 905, 1334, 1687, 2019
BmuI	ACTGGG	1 cut(s)	537
BpiI	GAAGAC	4 cut(s)	159, 391, 743, 1710
BplI	GAGNNNNNCTC	2 cut(s)	336, 368
BpmI	CTGGAG	5 cut(s)	376, 535, 1217, 1335, 2295
Bpu10I	CCTNAGC	1 cut(s)	79
Bpu1102I	GCTNAGC	1 cut(s)	455
Bpu14I	TTCGAA	1 cut(s)	165
BpuEI	CTTGAG	3 cut(s)	1797, 1817, 2384
BpuMI	CCSGG	1 cut(s)	1573
BsaBI	GATNNNNATC	1 cut(s)	166
BsaHI	GRCGYC	1 cut(s)	207
BsaI	GGTCTC	1 cut(s)	2335
BsaWI	WCCGGW	1 cut(s)	493
BsaXI	ACNNNNNCTCC	4 cut(s)	990, 1020, 1580, 1610
Bsc4I	CCNNNNNNNGG	2 cut(s)	293, 2246
Bse1I	ACTGG	9 cut(s)	259, 377, 532, 965, 1234, 1318, 1434, 1744, 2251
Bse3DI	GCAATG	5 cut(s)	542, 687, 1680, 2073, 2289
Bse8I	GATNNNNATC	1 cut(s)	166
BseBI	CCWGG	5 cut(s)	262, 288, 414, 882, 1806
BseGI	GGATG	7 cut(s)	408, 574, 907, 1325, 1507, 2128, 2240
BseJI	GATNNNNATC	1 cut(s)	166
BseLI	CCNNNNNNNGG	2 cut(s)	293, 2246
BseMI	GCAATG	5 cut(s)	542, 687, 1680, 2073, 2289
BseMII	CTCAG	3 cut(s)	469, 617, 1109
BseNI	ACTGG	9 cut(s)	259, 377, 532, 965, 1234, 1318, 1434, 1744, 2251
BseSI	GKGCMC	3 cut(s)	225, 1268, 1372
BseXI	GCAGC	9 cut(s)	113, 608, 619, 1477, 1505, 2099, 2209, 2266, 2275
BseYI	CCCAGC	1 cut(s)	1711
BsgI	GTGCAG	1 cut(s)	518
Bsh1236I	CGCG	2 cut(s)	961, 1067
BshFI	GGCC	6 cut(s)	223, 1103, 1281, 1517, 1523, 1576
BshNI	GGYRCC	1 cut(s)	772
BsiHKAI	GWGCWC	4 cut(s)	1276, 1372, 1813, 2208
BsiHKCI	CYCGRG	1 cut(s)	2207
BsiSI	CCGG	3 cut(s)	494, 1572, 1773
BslFI	GGGAC	2 cut(s)	933, 1420
BslI	CCNNNNNNNGG	2 cut(s)	293, 2246
BsmAI	GTCTC	2 cut(s)	665, 2335
BsmFI	GGGAC	2 cut(s)	933, 1420
BsnI	GGCC	6 cut(s)	223, 1103, 1281, 1517, 1523, 1576
Bso31I	GGTCTC	1 cut(s)	2335
BsoBI	CYCGRG	1 cut(s)	2207
Bsp119I	TTCGAA	1 cut(s)	165
Bsp120I	GGGCCC	1 cut(s)	221
Bsp1286I	GDGCHC	6 cut(s)	225, 1268, 1276, 1372, 1813, 2208
Bsp1407I	TGTACA	2 cut(s)	58, 405
Bsp1720I	GCTNAGC	1 cut(s)	455
Bsp19I	CCATGG	4 cut(s)	393, 550, 1177, 1209
BspACI	CCGC	3 cut(s)	291, 1132, 2036
BspANI	GGCC	6 cut(s)	223, 1103, 1281, 1517, 1523, 1576
BspCNI	CTCAG	3 cut(s)	468, 618, 1108
BspFNI	CGCG	2 cut(s)	961, 1067
BspLI	GGNNCC	5 cut(s)	223, 224, 259, 774, 2213
BspMAI	CTGCAG	2 cut(s)	1495, 2227
BspMI	ACCTGC	1 cut(s)	34
BspPI	GGATC	8 cut(s)	104, 252, 265, 1057, 1250, 1787, 2206, 2219
BspQI	GCTCTTC	2 cut(s)	25, 2102
BspT104I	TTCGAA	1 cut(s)	165
BspT107I	GGYRCC	1 cut(s)	772
BspTI	CTTAAG	1 cut(s)	419
BspTNI	GGTCTC	1 cut(s)	2335
BsrDI	GCAATG	5 cut(s)	542, 687, 1680, 2073, 2289
BsrGI	TGTACA	2 cut(s)	58, 405
BsrI	ACTGG	9 cut(s)	259, 377, 532, 965, 1234, 1318, 1434, 1744, 2251
BssNI	GRCGYC	1 cut(s)	207
Bst2UI	CCWGG	5 cut(s)	262, 288, 414, 882, 1806
Bst4CI	ACNGT	7 cut(s)	28, 991, 1006, 1158, 1378, 1921, 1990
Bst6I	CTCTTC	5 cut(s)	25, 298, 1554, 2102, 2240
BstACI	GRCGYC	1 cut(s)	207
BstAFI	CTTAAG	1 cut(s)	419
BstAPI	GCANNNNNTGC	3 cut(s)	15, 2060, 2288
BstAUI	TGTACA	2 cut(s)	58, 405
BstBI	TTCGAA	1 cut(s)	165
BstC8I	GCNNGC	5 cut(s)	1227, 1264, 1731, 1974, 2065
BstDEI	CTNAG	6 cut(s)	79, 430, 455, 626, 703, 1095
BstDSI	CCRYGG	4 cut(s)	393, 550, 1177, 1209
BstF5I	GGATG	7 cut(s)	408, 574, 907, 1325, 1507, 2128, 2240
BstFNI	CGCG	2 cut(s)	961, 1067
BstHHI	GCGC	4 cut(s)	549, 961, 1069, 1585
BstMAI	GTCTC	2 cut(s)	665, 2335
BstNI	CCWGG	5 cut(s)	262, 288, 414, 882, 1806
BstSCI	CCNGG	6 cut(s)	260, 286, 412, 880, 1571, 1804
BstSFI	CTRYAG	3 cut(s)	340, 1491, 2223
BstSLI	GKGCMC	3 cut(s)	225, 1268, 1372
BstUI	CGCG	2 cut(s)	961, 1067
BstV1I	GCAGC	9 cut(s)	113, 608, 619, 1477, 1505, 2099, 2209, 2266, 2275
BstV2I	GAAGAC	4 cut(s)	159, 391, 743, 1710
BstX2I	RGATCY	4 cut(s)	193, 257, 1242, 2211
BstXI	CCANNNNNNTGG	2 cut(s)	763, 1194
BstYI	RGATCY	4 cut(s)	193, 257, 1242, 2211
BsuI	GTATCC	1 cut(s)	1191
BsuRI	GGCC	6 cut(s)	223, 1103, 1281, 1517, 1523, 1576
BtgI	CCRYGG	4 cut(s)	393, 550, 1177, 1209
BtsCI	GGATG	7 cut(s)	408, 574, 907, 1325, 1507, 2128, 2240
BtsIMutI	CAGTG	9 cut(s)	24, 972, 1154, 1427, 1796, 1986, 2067, 2244, 2308
BveI	ACCTGC	1 cut(s)	34
Cac8I	GCNNGC	5 cut(s)	1227, 1264, 1731, 1974, 2065
CaiI	CAGNNNCTG	2 cut(s)	1721, 1790
CfoI	GCGC	4 cut(s)	549, 961, 1069, 1585
Cfr13I	GGNCC	4 cut(s)	221, 222, 1574, 1672
CseI	GACGC	3 cut(s)	164, 215, 950
CsiI	ACCWGGT	1 cut(s)	1804
CspCI	CAANNNNNGTGG	2 cut(s)	1143, 1178
DdeI	CTNAG	6 cut(s)	79, 430, 455, 626, 703, 1095
DraIII	CACNNNGTG	1 cut(s)	1615
EaeI	YGGCCR	2 cut(s)	1101, 1515
Eam1104I	CTCTTC	5 cut(s)	25, 298, 1554, 2102, 2240
EarI	CTCTTC	5 cut(s)	25, 298, 1554, 2102, 2240
Eco147I	AGGCCT	1 cut(s)	1281
Eco24I	GRGCYC	1 cut(s)	225
Eco31I	GGTCTC	1 cut(s)	2335
Eco47I	GGWCC	1 cut(s)	1672
Eco57I	CTGAAG	3 cut(s)	108, 1743, 1962
Eco88I	CYCGRG	1 cut(s)	2207
EcoO109I	RGGNCCY	2 cut(s)	221, 222
EcoRI	GAATTC	2 cut(s)	1472, 1743
EcoRII	CCWGG	5 cut(s)	260, 286, 412, 880, 1804
EcoT38I	GRGCYC	1 cut(s)	225
FalI	AAGNNNNNCTT	4 cut(s)	413, 445, 2099, 2131
FaqI	GGGAC	2 cut(s)	933, 1420
FbaI	TGATCA	1 cut(s)	1341
FblI	GTMKAC	2 cut(s)	488, 615
FokI	GGATG	7 cut(s)	395, 581, 914, 1312, 1514, 2135, 2227
FriOI	GRGCYC	1 cut(s)	225
FspBI	CTAG	7 cut(s)	675, 716, 800, 1277, 1283, 1748, 1781
GlaI	GCGC	4 cut(s)	548, 960, 1068, 1584
GsaI	CCCAGC	1 cut(s)	1715
GsuI	CTGGAG	5 cut(s)	376, 535, 1217, 1335, 2295
HaeIII	GGCC	6 cut(s)	223, 1103, 1281, 1517, 1523, 1576
HapII	CCGG	3 cut(s)	494, 1572, 1773
HgaI	GACGC	3 cut(s)	164, 215, 950
HhaI	GCGC	4 cut(s)	549, 961, 1069, 1585
Hin1I	GRCGYC	1 cut(s)	207
Hin6I	GCGC	4 cut(s)	547, 959, 1067, 1583
HinP1I	GCGC	4 cut(s)	547, 959, 1067, 1583
HincII	GTYRAC	3 cut(s)	205, 795, 1438
HindII	GTYRAC	3 cut(s)	205, 795, 1438
HpaI	GTTAAC	1 cut(s)	1438
HpaII	CCGG	3 cut(s)	494, 1572, 1773
HphI	GGTGA	9 cut(s)	200, 361, 836, 995, 1627, 1873, 1880, 2013, 2152
Hpy188I	TCNGA	6 cut(s)	901, 1054, 1098, 1119, 1550, 1792
Hpy188III	TCNNGA	6 cut(s)	355, 800, 1450, 1469, 1814, 2209
Hpy99I	CGWCG	1 cut(s)	1999
HpyAV	CCTTC	9 cut(s)	313, 724, 803, 883, 973, 1612, 1718, 1957, 2167
HpyCH4III	ACNGT	7 cut(s)	28, 991, 1006, 1158, 1378, 1921, 1990
HpyF3I	CTNAG	6 cut(s)	79, 430, 455, 626, 703, 1095
Hsp92I	GRCGYC	1 cut(s)	207
HspAI	GCGC	4 cut(s)	547, 959, 1067, 1583
Ksp22I	TGATCA	1 cut(s)	1341
KspAI	GTTAAC	1 cut(s)	1438
LguI	GCTCTTC	2 cut(s)	25, 2102
LmnI	GCTCC	5 cut(s)	296, 466, 1114, 2276, 2350
Lsp1109I	GCAGC	9 cut(s)	113, 608, 619, 1477, 1505, 2099, 2209, 2266, 2275
LweI	GCATC	5 cut(s)	736, 905, 1334, 1687, 2019
MabI	ACCWGGT	1 cut(s)	1804
MaeI	CTAG	7 cut(s)	675, 716, 800, 1277, 1283, 1748, 1781
MaeIII	GTNAC	3 cut(s)	1607, 1861, 1868
MfeI	CAATTG	4 cut(s)	1416, 1873, 2055, 2079
MflI	RGATCY	4 cut(s)	193, 257, 1242, 2211
MhlI	GDGCHC	6 cut(s)	225, 1268, 1276, 1372, 1813, 2208
MlsI	TGGCCA	2 cut(s)	1103, 1517
MluNI	TGGCCA	2 cut(s)	1103, 1517
MlyI	GAGTC	6 cut(s)	354, 790, 1097, 1326, 1440, 2012
MmeI	TCCRAC	1 cut(s)	1027
Mox20I	TGGCCA	2 cut(s)	1103, 1517
MroXI	GAANNNNTTC	1 cut(s)	2156
MscI	TGGCCA	2 cut(s)	1103, 1517
MseI	TTAA	7 cut(s)	180, 198, 386, 420, 575, 651, 1437
MslI	CAYNNNNRTG	3 cut(s)	239, 933, 1859
Msp20I	TGGCCA	2 cut(s)	1103, 1517
MspA1I	CMGCKG	1 cut(s)	136
MspCI	CTTAAG	1 cut(s)	419
MspI	CCGG	3 cut(s)	494, 1572, 1773
MspR9I	CCNGG	6 cut(s)	262, 288, 414, 882, 1573, 1806
MunI	CAATTG	4 cut(s)	1416, 1873, 2055, 2079
MvaI	CCWGG	5 cut(s)	262, 288, 414, 882, 1806
MvnI	CGCG	2 cut(s)	961, 1067
NciI	CCSGG	1 cut(s)	1573
NcoI	CCATGG	4 cut(s)	393, 550, 1177, 1209
NlaIV	GGNNCC	5 cut(s)	223, 224, 259, 774, 2213
NmuCI	GTSAC	3 cut(s)	1607, 1861, 1868
NspV	TTCGAA	1 cut(s)	165
PceI	AGGCCT	1 cut(s)	1281
PciSI	GCTCTTC	2 cut(s)	25, 2102
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PdmI	GAANNNNTTC	1 cut(s)	2156
PfeI	GAWTC	6 cut(s)	32, 162, 167, 481, 1564, 1931
PflMI	CCANNNNNTGG	2 cut(s)	293, 2246
PleI	GAGTC	6 cut(s)	353, 790, 1096, 1325, 1440, 2012
PpsI	GAGTC	6 cut(s)	353, 790, 1096, 1325, 1440, 2012
PshBI	ATTAAT	1 cut(s)	180
Psp6I	CCWGG	5 cut(s)	260, 286, 412, 880, 1804
PspFI	CCCAGC	1 cut(s)	1711
PspGI	CCWGG	5 cut(s)	260, 286, 412, 880, 1804
PspN4I	GGNNCC	5 cut(s)	223, 224, 259, 774, 2213
PspOMI	GGGCCC	1 cut(s)	221
PspPI	GGNCC	4 cut(s)	221, 222, 1574, 1672
PsrI	GAACNNNNNNTAC	2 cut(s)	1761, 1793
PstI	CTGCAG	2 cut(s)	1495, 2227
PstNI	CAGNNNCTG	2 cut(s)	1721, 1790
PsuI	RGATCY	4 cut(s)	193, 257, 1242, 2211
PvuII	CAGCTG	1 cut(s)	136
RseI	CAYNNNNRTG	3 cut(s)	239, 933, 1859
SapI	GCTCTTC	2 cut(s)	25, 2102
SaqAI	TTAA	7 cut(s)	180, 198, 386, 420, 575, 651, 1437
Sau96I	GGNCC	4 cut(s)	221, 222, 1574, 1672
ScaI	AGTACT	1 cut(s)	338
SchI	GAGTC	6 cut(s)	354, 790, 1097, 1326, 1440, 2012
ScrFI	CCNGG	6 cut(s)	262, 288, 414, 882, 1573, 1806
SduI	GDGCHC	6 cut(s)	225, 1268, 1276, 1372, 1813, 2208
SexAI	ACCWGGT	1 cut(s)	1804
SfaNI	GCATC	5 cut(s)	736, 905, 1334, 1687, 2019
SfcI	CTRYAG	3 cut(s)	340, 1491, 2223
SfuI	TTCGAA	1 cut(s)	165
SinI	GGWCC	1 cut(s)	1672
SmiMI	CAYNNNNRTG	3 cut(s)	239, 933, 1859
SmlI	CTYRAG	4 cut(s)	419, 1812, 1832, 2363
SmoI	CTYRAG	4 cut(s)	419, 1812, 1832, 2363
SpeI	ACTAGT	1 cut(s)	674
SseBI	AGGCCT	1 cut(s)	1281
SsiI	CCGC	3 cut(s)	291, 1132, 2036
SspMI	CTAG	7 cut(s)	675, 716, 800, 1277, 1283, 1748, 1781
StuI	AGGCCT	1 cut(s)	1281
StyD4I	CCNGG	6 cut(s)	260, 286, 412, 880, 1571, 1804
TaaI	ACNGT	7 cut(s)	28, 991, 1006, 1158, 1378, 1921, 1990
TaqI	TCGA	4 cut(s)	165, 1395, 1934, 2385
TatI	WGTACW	4 cut(s)	58, 336, 405, 1336
TauI	GCSGC	1 cut(s)	2039
TfiI	GAWTC	6 cut(s)	32, 162, 167, 481, 1564, 1931
Tru1I	TTAA	7 cut(s)	180, 198, 386, 420, 575, 651, 1437
Tru9I	TTAA	7 cut(s)	180, 198, 386, 420, 575, 651, 1437
TscAI	CASTG	9 cut(s)	31, 972, 1161, 1434, 1803, 1993, 2074, 2251, 2308
TseFI	GTSAC	3 cut(s)	1607, 1861, 1868
TseI	GCWGC	9 cut(s)	126, 596, 632, 1490, 1493, 2087, 2222, 2279, 2288
Tsp45I	GTSAC	3 cut(s)	1607, 1861, 1868
TspGWI	ACGGA	2 cut(s)	610, 2012
TspRI	CASTG	9 cut(s)	31, 972, 1161, 1434, 1803, 1993, 2074, 2251, 2308
Van91I	CCANNNNNTGG	2 cut(s)	293, 2246
Vha464I	CTTAAG	1 cut(s)	419
VneI	GTGCAC	1 cut(s)	1368
VpaK11BI	GGWCC	1 cut(s)	1672
VspI	ATTAAT	1 cut(s)	180
XapI	RAATTY	9 cut(s)	229, 279, 327, 1142, 1172, 1472, 1544, 1743, 1888
XbaI	TCTAGA	1 cut(s)	799
XmiI	GTMKAC	2 cut(s)	488, 615
XmnI	GAANNNNTTC	1 cut(s)	2156
XspI	CTAG	7 cut(s)	675, 716, 800, 1277, 1283, 1748, 1781
ZrmI	AGTACT	1 cut(s)	338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.