Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0002025

Physical Location & Seq

Genomic Coordinates Forward (+)

19854268 .. 19857688

Gene Structure 3421 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1080800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGACTTGCACTTCTTGCTCAACTACTGTTGAATCAGCTTTACAGGCAGTTCATGGTGTACAAAAAGCCCAAGTTGCCTTAGCAACTGAAGAAGCAGATGTCCACTATGATCCAAAGGTTGTGAGCTACAACCAGCTGTTGCAAACCATTGAAGACACTGGATTCGAAGGCATACTTATTACCGCAGGGGAAGACATGAGCCGGATAGAGCTTGAAGTTGATGGTGTAAGGACTGATCGCTCGATGAGAATACTTGGACAGTCTCTTCAAGCACTCCCTGGTGTGCAAACTATAGACTTTGATTCTGAAATCAAGAAAATCGCTGTTTCTTACAAATCAGATATGACAGGGCCAAGAAGTTTCATTAATGTGATTGAAACAACAGGGTCCAGGCGTTTCAAGGCAAAGATTTTTCCAGGAGGTGAAGCAGGAAGCGATAGTCATAGAAAGGAGGAAATTAAGCAGTATTTTAGAGTCTTTCTGTGGAGTTTGGTTTTCACTATTCCGGTGTTTTTAACCTCCATGGTGTTCATGTATATTCCTGGAATTAAGCATGGCCTAGAAACTAAAATAGTGCATAATCTCATGATTGGGGAGCTCATGAGGTGGATTCTGGCCACTCCGGTGCAATTCATTATAGGCCGGAGGTTCTATACTGGGGCATACAAATCACTACGGCATGGTTCTGCGAATATGGACGTGCTGATCGCATTAGGAACAAATGCAGCCTATTTTTATTCAGTCTACTCGGTAGTGAGAGCTGCTACCTCTCCAGATTTTATGGGTACTGATTTCTTCGAGACTAGTGCCATGCTTATTTCATTCATTCTTCTTGGAAAGTACCTAGAGGTATTAGCTAAGGGGAAGACATCAGATGCCATTGCCAAACTGATGGACTTGGCACCTGAAACAGCAACATTATTGGTACTAGACGAAGAAGGAAATGTGATAAATGAAGAGGAAATTGATAGTAGGTTGATACAAAAGAATGATATCCTTAAAATTATTCCTGGGGCGAAAGTAGCTTCAGATGGTTATGTTACATGGGGGCAAAGCCATGTTAATGAGAGTATGATAACGGGCGAAGCACTGCCGGTCGCAAAAAGAAAGGGTGATTCAGTCATTGGAGGTACTTTGAATGAGAATGGTGTCCTACATATCAAGGCAACTAGGGTTGGTGCAGAAAGTTCCCTTTCGCAAATTGTACGGCTTGTTGAGTCAGCTCAGATGGCCAAAGCTCCTGTACAGAAATTTGCTGACCGCATTTCCAAATACTTCGTGCCACTGGTGATCCTACTTTCATTCTTGACCTGGCTTTCCTGGTTTTTGTCTGGAAGATACCATGGCTACCCTGAATCTTGGATACCATCTTCCATGGATAGCTTTGAGCTTTCTCTCCAGTTTGGAATCTCTGTCATGGTTATAGCGTGCCCTTGTGCTTTAGGCCTAGCAACTCCCACAGCTGTCATGGTTGGAACTGGAGTAGGCGCATCTCAAGGTGTGTTGATCAAAGGAGGCCAAGCATTAGAAAGTGCACATAAGGTGAACTGCATTGTGTTCGACAAGACAGGGACTCTCACAATTGGAAAGCCAGTGGTTGTTAACACACGACTCCTGAAAAATATGGTGCTGCGAGAATTCTATGAACTTGTTGCTGCAGCTGAGGTGAACAGCGAACACCCGTTGGCTAAGGCCATTGTTGAGTACGCCAAAAAGTTCAGAGAAGACGAAGAGAATCCTGCCTGGCCAGAAGCAAAAGACTTTGAATCCATTACTGGTCATGGGGTGAGGGCCATTGTTAGGAACAAGGAAATAATTGTTGGCAACAAGAGTTTGATGGTGGAGCGCAACACTGCGGTTCCAATTGATGCAGAAGAGATACTTGCAGAAGCTGAAGGACTTGCTCAAACTGGGATTTTAATAGCTATAGATGGAAAAGTGGCTGGAGTTCTGTCCATATCTGATCCACTGAAACCAGGTGCTCAAGAAGTAATTTCCATACTCAAGTCTATGAAAATTAGAAGCATAATGGTGACAGGTGACAATTGGGGAACTGCAAATTCTATCGCTAATGAAGTTGGAATTGAGACCGTTATAGCAGAAGCCAAACCCGATCAGAAAGCAGAGAAAGTGAAGGAATTGCAGGCTTCCGGCAACATCGTGGCAATGGTGGGAGATGGAATCAATGACTCACCAGCACTTGTGGCAGCGGATGTAGGAATGGCAATTGGTGCAGGAACAGACATTGCCATTGAGGCAGCTGACATTGTTCTAATGAAAAGCAACTTGGAGGATGTGATAACTGCGATTCACCTTTCCAGGAAAACTTTCACCCGTATCCGTTTGAACTACATTTGGGCTTTGGGATACAACGTTCTTGGCATTCCAATAGCTGCAGGAGCCCTTTTCCCATATACTGGATTTCGTTTACCACCATGGATTGCTGGAGCTGCAATGGCTGCTTCTTCGGTCAGCGTTGTTTGCTGCTCTCTGCTGCTGAAGAATTATAAAAGGCCAAAGGTTCTGGACAACTTGGAGGTACGCGGAATAAGTATTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0008150 GO:0008324 GO:0009636 GO:0010035 GO:0010038 GO:0010273 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046688 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061687 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0097501 GO:0098655 GO:0098660 GO:0098662 GO:0098754 GO:0099131 GO:0099132 GO:1990169

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

854

Amino Acids

92.45

Weight (kDa)

5.73

Isoelectric Point (pI)

34.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMA	PF00403	1 - 56	7.1e-13	Heavy-metal-associated domain
E1-E2_ATPase	PF00122	300 - 406	9.7e-24	P-type ATPase actuator domain
Hydrolase	PF00702	516 - 738	2.2e-34	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63440
fragaria_vesca	FvH4_5g02090 FvH4_5g02090 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091
malus_domestica	MD06G1080800.v1.1 MD06G1080900.v1.1 MD14G1102600.v1.1
prunus_persica	Prupe.5G097900_v2.0.a1 Prupe.5G097900_v2.0.a1 Prupe.5G098000_v2.0.a1
pyrus_communis	pycom06g07780 pycom06g07790 pycom14g09890
rosa_chinensis	RchiOBHm_Chr7g0197781 RchiOBHm_Chr7g0198111 RchiOBHm_Chr7g0198141
rosa_laevigata	RLG00000003885 RLG00000003888 RLG00000019170
rosa_multiflora	Rmu_sc0000221.1_g000018 Rmu_sc0000221.1_g000030 Rmu_sc0006732.1_g000016
rosa_roxburghii	Rroxscaffold_3G00257940 Rroxscaffold_3G00257970 Rroxscaffold_3G00257990
rosa_rugosa	Rorug07G0045700 Rorug07G0045700 Rorug07G0045800 Rorug07G0045800 Rorug07G0045900
rosa_samantha	Rh7AG169100 Rh7AG169200 Rh7BG169900 Rh7BG172300 Rh7CG178600 Rh7CG178700 Rh7DG169200 Rh7DG171400 Rh7DG171800
rosa_wichuraiana	Rw7G014570 Rw7G014780 Rw7G014790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2508
AccB1I	GGYRCC	1 cut(s)	901
AccB7I	CCANNNNNTGG	1 cut(s)	2417
AccI	GTMKAC	1 cut(s)	744
AccII	CGCG	1 cut(s)	2544
AciI	CCGC	5 cut(s)	183, 1261, 1856, 2210, 2544
AclI	AACGTT	1 cut(s)	2373
AclWI	GGATC	3 cut(s)	104, 1285, 1958
AcoI	YGGCCR	3 cut(s)	615, 1230, 1745
AcsI	RAATTY	3 cut(s)	1250, 1637, 2059
AcuI	CTGAAG	4 cut(s)	108, 1011, 1914, 2519
AfaI	GTAC	9 cut(s)	60, 787, 842, 927, 1132, 1206, 1245, 1706, 2541
AfiI	CCNNNNNNNGG	2 cut(s)	1800, 2417
AgsI	TTSAA	9 cut(s)	32, 152, 215, 269, 377, 400, 1138, 1766, 2347
AhlI	ACTAGT	1 cut(s)	803
AjiI	CACGTC	1 cut(s)	700
AjuI	GAANNNNNNNTTGG	4 cut(s)	1803, 1835, 2270, 2302
AleI	CACNNNNGTG	1 cut(s)	623
AloI	GAACNNNNNNTCC	2 cut(s)	2358, 2390
Alw21I	GWGCWC	3 cut(s)	600, 1537, 1984
Alw26I	GTCTC	3 cut(s)	267, 794, 2081
Alw44I	GTGCAC	1 cut(s)	1533
AlwI	GGATC	3 cut(s)	104, 1285, 1958
AlwNI	CAGNNNCTG	1 cut(s)	1892
ApaLI	GTGCAC	1 cut(s)	1533
ApoI	RAATTY	3 cut(s)	1250, 1637, 2059
ArsI	GACNNNNNNTTYG	2 cut(s)	146, 178
AseI	ATTAAT	1 cut(s)	366
Asp700I	GAANNNNTTC	1 cut(s)	2327
AspLEI	GCGC	2 cut(s)	1490, 1848
AspS9I	GGNCC	3 cut(s)	350, 387, 1791
AsuII	TTCGAA	1 cut(s)	165
AvaII	GGWCC	1 cut(s)	387
BaeGI	GKGCMC	2 cut(s)	1433, 1537
BalI	TGGCCA	3 cut(s)	617, 1232, 1747
BanI	GGYRCC	1 cut(s)	901
BanII	GRGCYC	2 cut(s)	600, 2404
BbsI	GAAGAC	4 cut(s)	159, 198, 872, 1731
Bbv12I	GWGCWC	3 cut(s)	600, 1537, 1984
BbvCI	CCTCAGC	1 cut(s)	1662
BccI	CCATC	8 cut(s)	215, 886, 1025, 1222, 1375, 1831, 1925, 2171
BceAI	ACGGC	2 cut(s)	692, 1223
BcgI	CGANNNNNNTGC	4 cut(s)	788, 822, 1540, 1574
BciVI	GTATCC	3 cut(s)	1356, 2348, 2360
BclI	TGATCA	1 cut(s)	1506
BcoDI	GTCTC	3 cut(s)	267, 794, 2081
BcuI	ACTAGT	1 cut(s)	803
BfaI	CTAG	6 cut(s)	560, 804, 845, 929, 1170, 1448
BfmI	CTRYAG	4 cut(s)	291, 1656, 1926, 2394
BfuI	GTATCC	3 cut(s)	1356, 2348, 2360
BglI	GCCNNNNNGGC	1 cut(s)	2255
Bme18I	GGWCC	1 cut(s)	387
BmgBI	CACGTC	1 cut(s)	700
BmgT120I	GGNCC	3 cut(s)	350, 387, 1791
BmiI	GGNNCC	4 cut(s)	388, 903, 1860, 2401
BmrI	ACTGGG	2 cut(s)	666, 1920
BmsI	GCATC	3 cut(s)	865, 1499, 1858
BmuI	ACTGGG	2 cut(s)	666, 1920
BpiI	GAAGAC	4 cut(s)	159, 198, 872, 1731
BpmI	CTGGAG	5 cut(s)	756, 1382, 1500, 1965, 2466
Bpu10I	CCTNAGC	4 cut(s)	79, 858, 1662, 1689
Bpu14I	TTCGAA	1 cut(s)	165
BpuEI	CTTGAG	3 cut(s)	1479, 1968, 1988
BsaI	GGTCTC	1 cut(s)	2081
BsaJI	CCNNGG	6 cut(s)	277, 522, 1010, 1342, 1374, 2435
BsaWI	WCCGGW	2 cut(s)	505, 622
Bsc4I	CCNNNNNNNGG	2 cut(s)	1800, 2417
Bse118I	RCCGGY	1 cut(s)	1093
Bse1I	ACTGG	9 cut(s)	163, 661, 1290, 1399, 1483, 1592, 1780, 1915, 2422
Bse3DI	GCAATG	4 cut(s)	879, 2172, 2244, 2460
BseDI	CCNNGG	6 cut(s)	277, 522, 1010, 1342, 1374, 2435
BseGI	GGATG	2 cut(s)	2218, 2299
BseLI	CCNNNNNNNGG	2 cut(s)	1800, 2417
BseMI	GCAATG	4 cut(s)	879, 2172, 2244, 2460
BseMII	CTCAG	2 cut(s)	1238, 1653
BseNI	ACTGG	9 cut(s)	163, 661, 1290, 1399, 1483, 1592, 1780, 1915, 2422
BseSI	GKGCMC	2 cut(s)	1433, 1537
BsgI	GTGCAG	2 cut(s)	1200, 2253
Bsh1236I	CGCG	1 cut(s)	2544
Bsh1285I	CGRYCG	1 cut(s)	1098
BshNI	GGYRCC	1 cut(s)	901
BsiEI	CGRYCG	1 cut(s)	1098
BsiHKAI	GWGCWC	3 cut(s)	600, 1537, 1984
BsiSI	CCGG	6 cut(s)	202, 506, 623, 643, 1094, 2151
BslFI	GGGAC	1 cut(s)	1585
BslI	CCNNNNNNNGG	2 cut(s)	1800, 2417
BsmAI	GTCTC	3 cut(s)	267, 794, 2081
BsmFI	GGGAC	1 cut(s)	1585
BsmI	GAATGC	1 cut(s)	2382
Bso31I	GGTCTC	1 cut(s)	2081
Bsp119I	TTCGAA	1 cut(s)	165
Bsp1286I	GDGCHC	5 cut(s)	600, 1433, 1537, 1984, 2404
Bsp1407I	TGTACA	2 cut(s)	58, 1243
Bsp143I	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
Bsp19I	CCATGG	4 cut(s)	522, 1342, 1374, 2435
BspACI	CCGC	5 cut(s)	183, 1261, 1856, 2210, 2544
BspCNI	CTCAG	2 cut(s)	1237, 1654
BspFNI	CGCG	1 cut(s)	2544
BspHI	TCATGA	2 cut(s)	585, 600
BspLI	GGNNCC	4 cut(s)	388, 903, 1860, 2401
BspMAI	CTGCAG	2 cut(s)	1660, 2398
BspPI	GGATC	3 cut(s)	104, 1285, 1958
BspT104I	TTCGAA	1 cut(s)	165
BspT107I	GGYRCC	1 cut(s)	901
BspTNI	GGTCTC	1 cut(s)	2081
BsrDI	GCAATG	4 cut(s)	879, 2172, 2244, 2460
BsrFI	RCCGGY	1 cut(s)	1093
BsrGI	TGTACA	2 cut(s)	58, 1243
BsrI	ACTGG	9 cut(s)	163, 661, 1290, 1399, 1483, 1592, 1780, 1915, 2422
BssAI	RCCGGY	1 cut(s)	1093
BssECI	CCNNGG	6 cut(s)	277, 522, 1010, 1342, 1374, 2435
BssMI	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
BssT1I	CCWWGG	4 cut(s)	522, 1342, 1374, 2435
Bst4CI	ACNGT	3 cut(s)	28, 261, 2092
Bst6I	CTCTTC	4 cut(s)	270, 951, 1725, 1869
BstAPI	GCANNNNNTGC	3 cut(s)	15, 2231, 2459
BstAUI	TGTACA	2 cut(s)	58, 1243
BstBI	TTCGAA	1 cut(s)	165
BstC8I	GCNNGC	2 cut(s)	1429, 2145
BstDEI	CTNAG	5 cut(s)	79, 858, 1224, 1662, 1689
BstDSI	CCRYGG	4 cut(s)	522, 1342, 1374, 2435
BstF5I	GGATG	2 cut(s)	2218, 2299
BstFNI	CGCG	1 cut(s)	2544
BstHHI	GCGC	2 cut(s)	1490, 1848
BstKTI	GATC	7 cut(s)	112, 238, 708, 1293, 1509, 1966, 2116
BstMAI	GTCTC	3 cut(s)	267, 794, 2081
BstMBI	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
BstMCI	CGRYCG	1 cut(s)	1098
BstSFI	CTRYAG	4 cut(s)	291, 1656, 1926, 2394
BstSLI	GKGCMC	2 cut(s)	1433, 1537
BstUI	CGCG	1 cut(s)	2544
BstV2I	GAAGAC	4 cut(s)	159, 198, 872, 1731
BstXI	CCANNNNNNTGG	1 cut(s)	892
BsuI	GTATCC	3 cut(s)	1356, 2348, 2360
BtgI	CCRYGG	4 cut(s)	522, 1342, 1374, 2435
BtrI	CACGTC	1 cut(s)	700
BtsCI	GGATG	2 cut(s)	2218, 2299
BtsI	GCAGTG	2 cut(s)	1088, 1851
BtsIMutI	CAGTG	6 cut(s)	156, 1088, 1283, 1599, 1851, 1967
Cac8I	GCNNGC	2 cut(s)	1429, 2145
CaiI	CAGNNNCTG	1 cut(s)	1892
CciI	TCATGA	2 cut(s)	585, 600
CfoI	GCGC	2 cut(s)	1490, 1848
Cfr10I	RCCGGY	1 cut(s)	1093
Cfr13I	GGNCC	3 cut(s)	350, 387, 1791
CsiI	ACCWGGT	1 cut(s)	1975
Csp6I	GTAC	9 cut(s)	59, 786, 841, 926, 1131, 1205, 1244, 1705, 2540
CviQI	GTAC	9 cut(s)	59, 786, 841, 926, 1131, 1205, 1244, 1705, 2540
DdeI	CTNAG	5 cut(s)	79, 858, 1224, 1662, 1689
DpnI	GATC	7 cut(s)	111, 237, 707, 1292, 1508, 1965, 2115
DpnII	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
EaeI	YGGCCR	3 cut(s)	615, 1230, 1745
Eam1104I	CTCTTC	4 cut(s)	270, 951, 1725, 1869
EarI	CTCTTC	4 cut(s)	270, 951, 1725, 1869
Ecl136II	GAGCTC	1 cut(s)	598
Eco130I	CCWWGG	4 cut(s)	522, 1342, 1374, 2435
Eco147I	AGGCCT	1 cut(s)	1446
Eco24I	GRGCYC	2 cut(s)	600, 2404
Eco31I	GGTCTC	1 cut(s)	2081
Eco32I	GATATC	1 cut(s)	994
Eco47I	GGWCC	1 cut(s)	387
Eco53kI	GAGCTC	1 cut(s)	598
Eco57I	CTGAAG	4 cut(s)	108, 1011, 1914, 2519
EcoICRI	GAGCTC	1 cut(s)	598
EcoRI	GAATTC	1 cut(s)	1637
EcoRV	GATATC	1 cut(s)	994
EcoT14I	CCWWGG	4 cut(s)	522, 1342, 1374, 2435
EcoT38I	GRGCYC	2 cut(s)	600, 2404
ErhI	CCWWGG	4 cut(s)	522, 1342, 1374, 2435
FalI	AAGNNNNNCTT	4 cut(s)	159, 191, 1866, 1898
FaqI	GGGAC	1 cut(s)	1585
FbaI	TGATCA	1 cut(s)	1506
FblI	GTMKAC	1 cut(s)	744
FokI	GGATG	2 cut(s)	2225, 2306
FriOI	GRGCYC	2 cut(s)	600, 2404
FspBI	CTAG	6 cut(s)	560, 804, 845, 929, 1170, 1448
GlaI	GCGC	2 cut(s)	1489, 1847
GsuI	CTGGAG	5 cut(s)	756, 1382, 1500, 1965, 2466
HapII	CCGG	6 cut(s)	202, 506, 623, 643, 1094, 2151
HhaI	GCGC	2 cut(s)	1490, 1848
Hin6I	GCGC	2 cut(s)	1488, 1846
HinP1I	GCGC	2 cut(s)	1488, 1846
HincII	GTYRAC	1 cut(s)	1603
HindII	GTYRAC	1 cut(s)	1603
HpaI	GTTAAC	1 cut(s)	1603
HpaII	CCGG	6 cut(s)	202, 506, 623, 643, 1094, 2151
Hpy166II	GTNNAC	8 cut(s)	59, 103, 745, 1535, 1546, 1603, 1669, 2429
Hpy188I	TCNGA	8 cut(s)	307, 340, 874, 1030, 1227, 1721, 1963, 2118
Hpy8I	GTNNAC	8 cut(s)	59, 103, 745, 1535, 1546, 1603, 1669, 2429
HpyAV	CCTTC	4 cut(s)	161, 932, 1889, 2128
HpyCH4III	ACNGT	3 cut(s)	28, 261, 2092
HpyCH4IV	ACGT	2 cut(s)	699, 2373
HpyF3I	CTNAG	5 cut(s)	79, 858, 1224, 1662, 1689
HpySE526I	ACGT	2 cut(s)	699, 2373
HspAI	GCGC	2 cut(s)	1488, 1846
Ksp22I	TGATCA	1 cut(s)	1506
KspAI	GTTAAC	1 cut(s)	1603
Kzo9I	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
LmnI	GCTCC	5 cut(s)	595, 1243, 1843, 2399, 2447
LweI	GCATC	3 cut(s)	865, 1499, 1858
MabI	ACCWGGT	1 cut(s)	1975
MaeI	CTAG	6 cut(s)	560, 804, 845, 929, 1170, 1448
MaeII	ACGT	2 cut(s)	699, 2373
MaeIII	GTNAC	3 cut(s)	1039, 2032, 2039
MalI	GATC	7 cut(s)	111, 237, 707, 1292, 1508, 1965, 2115
MboI	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
MfeI	CAATTG	4 cut(s)	1581, 1863, 2044, 2226
MhlI	GDGCHC	5 cut(s)	600, 1433, 1537, 1984, 2404
MlsI	TGGCCA	3 cut(s)	617, 1232, 1747
MluNI	TGGCCA	3 cut(s)	617, 1232, 1747
MlyI	GAGTC	5 cut(s)	483, 1226, 1567, 1605, 2183
MmeI	TCCRAC	2 cut(s)	1453, 2059
Mox20I	TGGCCA	3 cut(s)	617, 1232, 1747
MroXI	GAANNNNTTC	1 cut(s)	2327
MscI	TGGCCA	3 cut(s)	617, 1232, 1747
MseI	TTAA	8 cut(s)	366, 459, 515, 549, 999, 1062, 1602, 1919
MslI	CAYNNNNRTG	4 cut(s)	368, 623, 1062, 2030
Msp20I	TGGCCA	3 cut(s)	617, 1232, 1747
MspA1I	CMGCKG	5 cut(s)	136, 1463, 1661, 2210, 2261
MspI	CCGG	6 cut(s)	202, 506, 623, 643, 1094, 2151
MunI	CAATTG	4 cut(s)	1581, 1863, 2044, 2226
Mva1269I	GAATGC	1 cut(s)	2382
MvnI	CGCG	1 cut(s)	2544
NcoI	CCATGG	4 cut(s)	522, 1342, 1374, 2435
NdeII	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
NlaIV	GGNNCC	4 cut(s)	388, 903, 1860, 2401
NmuCI	GTSAC	2 cut(s)	2032, 2039
NspV	TTCGAA	1 cut(s)	165
OliI	CACNNNNGTG	1 cut(s)	623
PagI	TCATGA	2 cut(s)	585, 600
PceI	AGGCCT	1 cut(s)	1446
PctI	GAATGC	1 cut(s)	2382
PdmI	GAANNNNTTC	1 cut(s)	2327
PflMI	CCANNNNNTGG	1 cut(s)	2417
PfoI	TCCNGGA	3 cut(s)	415, 541, 2318
PleI	GAGTC	5 cut(s)	482, 1225, 1567, 1605, 2183
PpsI	GAGTC	5 cut(s)	482, 1225, 1567, 1605, 2183
PshBI	ATTAAT	1 cut(s)	366
PsiI	TTATAA	1 cut(s)	2508
Psp124BI	GAGCTC	1 cut(s)	600
Psp1406I	AACGTT	1 cut(s)	2373
PspN4I	GGNNCC	4 cut(s)	388, 903, 1860, 2401
PspPI	GGNCC	3 cut(s)	350, 387, 1791
PstI	CTGCAG	2 cut(s)	1660, 2398
PstNI	CAGNNNCTG	1 cut(s)	1892
PvuII	CAGCTG	4 cut(s)	136, 1463, 1661, 2261
RsaI	GTAC	9 cut(s)	60, 787, 842, 927, 1132, 1206, 1245, 1706, 2541
RsaNI	GTAC	9 cut(s)	59, 786, 841, 926, 1131, 1205, 1244, 1705, 2540
RseI	CAYNNNNRTG	4 cut(s)	368, 623, 1062, 2030
SacI	GAGCTC	1 cut(s)	600
SaqAI	TTAA	8 cut(s)	366, 459, 515, 549, 999, 1062, 1602, 1919
Sau3AI	GATC	7 cut(s)	109, 235, 705, 1290, 1506, 1963, 2113
Sau96I	GGNCC	3 cut(s)	350, 387, 1791
SchI	GAGTC	5 cut(s)	483, 1226, 1567, 1605, 2183
SduI	GDGCHC	5 cut(s)	600, 1433, 1537, 1984, 2404
SexAI	ACCWGGT	1 cut(s)	1975
SfaNI	GCATC	3 cut(s)	865, 1499, 1858
SfcI	CTRYAG	4 cut(s)	291, 1656, 1926, 2394
SfuI	TTCGAA	1 cut(s)	165
SinI	GGWCC	1 cut(s)	387
SmiMI	CAYNNNNRTG	4 cut(s)	368, 623, 1062, 2030
SmlI	CTYRAG	3 cut(s)	1494, 1983, 2003
SmoI	CTYRAG	3 cut(s)	1494, 1983, 2003
SpeI	ACTAGT	1 cut(s)	803
SseBI	AGGCCT	1 cut(s)	1446
SsiI	CCGC	5 cut(s)	183, 1261, 1856, 2210, 2544
SspMI	CTAG	6 cut(s)	560, 804, 845, 929, 1170, 1448
SstI	GAGCTC	1 cut(s)	600
StuI	AGGCCT	1 cut(s)	1446
StyI	CCWWGG	4 cut(s)	522, 1342, 1374, 2435
TaaI	ACNGT	3 cut(s)	28, 261, 2092
TaiI	ACGT	2 cut(s)	702, 2376
TaqI	TCGA	4 cut(s)	165, 242, 798, 1560
TaqII	GACCGA	1 cut(s)	2458
TatI	WGTACW	2 cut(s)	58, 1243
Tru1I	TTAA	8 cut(s)	366, 459, 515, 549, 999, 1062, 1602, 1919
Tru9I	TTAA	8 cut(s)	366, 459, 515, 549, 999, 1062, 1602, 1919
TscAI	CASTG	6 cut(s)	163, 1095, 1290, 1599, 1858, 1974
TseFI	GTSAC	2 cut(s)	2032, 2039
Tsp45I	GTSAC	2 cut(s)	2032, 2039
TspGWI	ACGGA	1 cut(s)	2330
TspRI	CASTG	6 cut(s)	163, 1095, 1290, 1599, 1858, 1974
Van91I	CCANNNNNTGG	1 cut(s)	2417
VneI	GTGCAC	1 cut(s)	1533
VpaK11BI	GGWCC	1 cut(s)	387
VspI	ATTAAT	1 cut(s)	366
XapI	RAATTY	3 cut(s)	1250, 1637, 2059
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1465
XmiI	GTMKAC	1 cut(s)	744
XmnI	GAANNNNTTC	1 cut(s)	2327
XspI	CTAG	6 cut(s)	560, 804, 845, 929, 1170, 1448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.