Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0002025

Physical Location & Seq

Genomic Coordinates Forward (+)

12204369 .. 12209360

Gene Structure 4992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g09890.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2961 bp

ATGGCGACCAAGCTCTTGGCCCTATGCATACGCAACGAGAGCCGGGGCGACCTCTCACCCCGGCCCCACTACCCGTCCATGCCAAAGTTCCCCAAAGGTGTGGCGGCTGAAGAGACCAGCCTGGCAGCCGGAGCTGAGGCTAAGGCTTTGTTCTCTGTCATGGGCATGACGTGCTCCGCCTGTGCCGGGTCAGTCGAGAAGGCCGTCAAGAGGCTCCCTGGGATTCGCGAGGCTGTTGTCGACGTCTTGAACAACCGGGCGCAAGTCATGTTCTTTCCCAATTACGTTAACGCGGAGACTATTCGCGAGACGATTGAAGACGTTGGATTCCAAGCCACTTTGATTAATGATGAGGGAAATGAGAAGTCCATATTGATATGTAGAATTCGGATAAAGGGAATGACTTGCACTTCTTGCTCGACCACTGTTGAATCAGCTTTACAGGCAATTGATGGTGTACAAAAAGCCCAAGTTGCCTTAGCAACTAAAGAAGCAGATGTTCACTATGATCCAAAGATTGTGAGCTACAACCAGCTGTTGCAAACCATTGAAGACACTGGATTCGAAGGCATACTCATTACTGCAGGGGAACACATGAGCCGGATAGAGCTTGAAGTTGATGGTGTAAGGACCGATCGTTCAATGAGGATACTTGAACAGTCTCTTCAAGCACTCCCTGGTGTGCAATCTGTAGACTTTGATTCTGAAATCAAGAAAATATCTCTTTATTACAAATCATATATGACAGGGCCAAGAAGTTTCATTCATGTGATTGAAACAACCGGGTCCAGGTGTTTCAAAGCAAGGATTTTTCCAGGAGGTGAAGCAGGAAGAGATAGTCATAGAAAGGAGGAAATTAAGCAGTATTTTAGAGTCTTTCTGTGGAGTTTGGTTTTCACTATTCCGGTGTTTTTAACCTCCATGGTCTTCATGTATATTCCTGGAATTAAGCATGGCCTAGAAACTAAAATTGTGAATAATCTCATGATTGGGGAGCTCATGAGATGGATTCTGGCCACCCCGGTGCAATTCATTATAGGCCAGAGGTTCTATACTGGGGCATACAAATCACTGCGCCATGGTTCTGCCAATATGGATGTGCTAATCGCATTAGGAACAAATGCAGCCTATTTTTATTCGGTCTACTCGGTAGTGAGAGCTGCTACCTCTCCAGATTTTATGGGGACTGATTTTTTCGAGACTAGTGCCATGCTTATTTCATTCATTCTCCTTGGAAAGTACCTAGAGGTATTAACTAAGGGGAAGACATCTGATGCCATTGCCAAATTGATGGACTTGGCACCTGAAACAGCGGCATTGTTGACACTAGATGAAGAAGGAAATGTGATAAATGAACAGGAAATTGATAGTAGGTTGATACAAAAGAATGACATACTTAAAATTATTCCAGGGGCGAAAGTAGCCTCAGATGGTTATGTTACATGGGGGCAAAGCCATGTTAATGAGAGTATGATAACAGGAGAAGCACGACCAGTCGCAAAAAGAAAGGGCGACTCAGTCATTGGAGGTACTTTGAATGAGAATGGTGTCCTACATATCAAGGCAACTAGAGTTGGTTCAGAAAGTTCCCTTTCCCAGATTGTACGGCTGGTTGAGTCAGCTCAGATGGCCAAAGCTCCTGTACAGAAGTTTGCGGACCGCATTTCCAAATACTTTGTGCCACTGGTGATCCTACTTTCGTTCTTGACCTGGCTTTCCTGGTTTTTGGCTGGAAAATACCACAGCTACCCTGAATCTTGGATACCATCTTCCATGGATAGCTTTGAGCTTTCTCTCCAGTTTGGAATTTCTGTCATGGTTATAGCATGCCCTTGTGCTTTAGGCCTAGCAACTCCCACAGCTGTCATGGTTGGAACTGGAGTAGGCGCATTTCAAGGTGTATTGATCAAAGGAGGCCAAGCATTAGAAAGTGCACATAAGGTGAACTGCATTGTGTTCGACAAGACGGGGACTCTAACGATTGGAAAGCCAGTGGTTGTCAACACGCGACTTATGAAAAATATGGTGCTTCAAGAATTCTATGAACTTGTTGCTGCAGCTGAGGTGAATAGCGAACACCCGTTGGCAAAGGCCATTGTTGAGTATGCCAAAAAGTTCAGAGAAGACGAAGAGAATCCTGCTTGGCCAGGAGCAAAACACTTTGAATCCATTACTGGCCATGGGGTGAAGGCCATTGTTAGGAACAAGGAGATAATTGTTGGCAACAAGAGCTTGATAGTGGAGCACAGCATTGCGGTTCCAATTGATGCAGAAGAGATACTTGCAGAAGCGGAAGGACTCGCTCAAACTGGAATTTTAATAGCTATGGATGGACAAGTGGCTGGAGTTCTGTCCATATCTGATCCACTGAAACCAAGTGCTCGAGAAGTAATTTCCATACTCAAGTCTATGAAAGTTAGAAGCATAATGGTGACAGGTGACAACTGGGGAACTGCAAATTCTATCGCTAAGGAAGTTGGAATTCAGACCGTTATAGCAGAAGCCAAACCCGATCAGAAAGCAGAAAAAGTGAAGGACTTGCAGTCTTCAGGCTACACTGTGGCAATGGTGGGAGACGGAATCAATGACTCACCAGCACTTGTGGCAGCAGATGTAGGAATGGCAATTGGTGCAGGAACAGACATTGCCATTGAGGCAGCTGACATTGTTCTAGTGAAGAGCAACTTGGAAGATGTGATAACTGCGATTCACCTTTCCAGGAAAACCTTCACCCGTATCCGTTTGAACTACATCTGGGCTTTGGGATATAACGTTCTTGGAATTCCAATAGCTGCAGGAGCCCTTTTCCCACCTACTGGATTTCGTTTACCACCATGGATTGCTGGAGCTGCAATGGCAGCTTCTTCTGTCAGTGTTGTTTGCTGCTCTCTGCTGTTGAAGAATTATAAGAAGCCAAAGGTTCTGGACAACTTAGAGGTACGCGGAATAAGTATTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0008150 GO:0008324 GO:0009636 GO:0010035 GO:0010038 GO:0010273 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046688 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061687 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0097501 GO:0098655 GO:0098660 GO:0098662 GO:0098754 GO:0099131 GO:0099132 GO:1990169

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

987

Amino Acids

107.05

Weight (kDa)

6.41

Isoelectric Point (pI)

33.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63440
fragaria_vesca	FvH4_5g02090 FvH4_5g02090 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091
malus_domestica	MD06G1080800.v1.1 MD06G1080900.v1.1 MD14G1102600.v1.1
prunus_persica	Prupe.5G097900_v2.0.a1 Prupe.5G097900_v2.0.a1 Prupe.5G098000_v2.0.a1
pyrus_communis	pycom06g07780 pycom06g07790 pycom14g09890
rosa_chinensis	RchiOBHm_Chr7g0197781 RchiOBHm_Chr7g0198111 RchiOBHm_Chr7g0198141
rosa_laevigata	RLG00000003885 RLG00000003888 RLG00000019170
rosa_multiflora	Rmu_sc0000221.1_g000018 Rmu_sc0000221.1_g000030 Rmu_sc0006732.1_g000016
rosa_roxburghii	Rroxscaffold_3G00257940 Rroxscaffold_3G00257970 Rroxscaffold_3G00257990
rosa_rugosa	Rorug07G0045700 Rorug07G0045700 Rorug07G0045800 Rorug07G0045800 Rorug07G0045900
rosa_samantha	Rh7AG169100 Rh7AG169200 Rh7BG169900 Rh7BG172300 Rh7CG178600 Rh7CG178700 Rh7DG169200 Rh7DG171400 Rh7DG171800
rosa_wichuraiana	Rw7G014570 Rw7G014780 Rw7G014790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2907
AatII	GACGTC	1 cut(s)	246
AccB1I	GGYRCC	1 cut(s)	1300
AccB7I	CCANNNNNTGG	1 cut(s)	2816
AccI	GTMKAC	3 cut(s)	240, 693, 1143
AccII	CGCG	5 cut(s)	228, 293, 306, 2008, 2943
AciI	CCGC	9 cut(s)	104, 177, 293, 1313, 1655, 1660, 2255, 2291, 2943
AclI	AACGTT	1 cut(s)	2772
AclWI	GGATC	3 cut(s)	503, 1684, 2357
AcoI	YGGCCR	4 cut(s)	1014, 1629, 2144, 2176
AcsI	RAATTY	7 cut(s)	384, 1806, 2036, 2313, 2458, 2481, 2781
AcuI	CTGAAG	2 cut(s)	129, 2532
AcyI	GRCGYC	1 cut(s)	243
AfaI	GTAC	6 cut(s)	459, 1241, 1531, 1605, 1644, 2940
AfiI	CCNNNNNNNGG	5 cut(s)	186, 210, 789, 2199, 2816
AhdI	GACNNNNNGTC	1 cut(s)	2542
AhlI	ACTAGT	1 cut(s)	1202
AjiI	CACGTC	1 cut(s)	171
AjuI	GAANNNNNNNTTGG	2 cut(s)	2669, 2701
AleI	CACNNNNGTG	1 cut(s)	1022
AloI	GAACNNNNNNTCC	4 cut(s)	622, 654, 2757, 2789
Alw21I	GWGCWC	5 cut(s)	176, 999, 1936, 2247, 2383
Alw26I	GTCTC	6 cut(s)	107, 290, 302, 666, 1193, 2568
Alw44I	GTGCAC	1 cut(s)	1932
AlwI	GGATC	3 cut(s)	503, 1684, 2357
Ama87I	CYCGRG	1 cut(s)	2382
ApaLI	GTGCAC	1 cut(s)	1932
ApoI	RAATTY	7 cut(s)	384, 1806, 2036, 2313, 2458, 2481, 2781
ArsI	GACNNNNNNTTYG	2 cut(s)	545, 577
AseI	ATTAAT	1 cut(s)	345
Asp700I	GAANNNNTTC	1 cut(s)	2726
AspLEI	GCGC	3 cut(s)	262, 1077, 1889
AspS9I	GGNCC	6 cut(s)	19, 63, 630, 749, 786, 1657
AsuC2I	CCSGG	6 cut(s)	44, 61, 187, 257, 784, 1022
AsuII	TTCGAA	1 cut(s)	564
AvaI	CYCGRG	1 cut(s)	2382
AvaII	GGWCC	3 cut(s)	630, 786, 1657
BaeGI	GKGCMC	1 cut(s)	1936
BalI	TGGCCA	4 cut(s)	1016, 1631, 2146, 2178
BanI	GGYRCC	1 cut(s)	1300
BanII	GRGCYC	2 cut(s)	999, 2803
BbsI	GAAGAC	6 cut(s)	324, 558, 919, 1271, 2130, 2538
Bbv12I	GWGCWC	5 cut(s)	176, 999, 1936, 2247, 2383
BbvCI	CCTCAGC	2 cut(s)	135, 2061
BccI	CCATC	8 cut(s)	446, 614, 999, 1285, 1424, 1621, 1774, 2324
BceAI	ACGGC	2 cut(s)	188, 1622
BcgI	CGANNNNNNTGC	4 cut(s)	1187, 1221, 1939, 1973
BciVI	GTATCC	3 cut(s)	642, 1755, 2747
BclI	TGATCA	1 cut(s)	1905
BcnI	CCSGG	6 cut(s)	44, 61, 187, 257, 784, 1022
BcoDI	GTCTC	6 cut(s)	107, 290, 302, 666, 1193, 2568
BcuI	ACTAGT	1 cut(s)	1202
BfaI	CTAG	7 cut(s)	959, 1203, 1244, 1328, 1569, 1847, 2672
BfmI	CTRYAG	4 cut(s)	582, 690, 2055, 2793
BfuI	GTATCC	3 cut(s)	642, 1755, 2747
BglI	GCCNNNNNGGC	1 cut(s)	2654
Bme18I	GGWCC	3 cut(s)	630, 786, 1657
BmeRI	GACNNNNNGTC	1 cut(s)	2542
BmeT110I	CYCGRG	1 cut(s)	2382
BmgBI	CACGTC	1 cut(s)	171
BmgT120I	GGNCC	6 cut(s)	19, 63, 630, 749, 786, 1657
BmiI	GGNNCC	6 cut(s)	65, 215, 787, 1302, 2259, 2800
BmrI	ACTGGG	2 cut(s)	1065, 2455
BmsI	GCATC	2 cut(s)	1264, 2257
BmuI	ACTGGG	2 cut(s)	1065, 2455
BpiI	GAAGAC	6 cut(s)	324, 558, 919, 1271, 2130, 2538
BpmI	CTGGAG	5 cut(s)	1155, 1781, 1899, 2364, 2865
Bpu10I	CCTNAGC	5 cut(s)	135, 141, 478, 2061, 2469
Bpu14I	TTCGAA	1 cut(s)	564
BpuEI	CTTGAG	1 cut(s)	2387
BpuMI	CCSGG	6 cut(s)	44, 61, 187, 257, 784, 1022
BsaHI	GRCGYC	1 cut(s)	243
BsaI	GGTCTC	1 cut(s)	107
BsaWI	WCCGGW	1 cut(s)	904
Bsc4I	CCNNNNNNNGG	5 cut(s)	186, 210, 789, 2199, 2816
Bse3DI	GCAATG	5 cut(s)	1278, 2250, 2571, 2643, 2859
BseGI	GGATG	2 cut(s)	1102, 2335
BseLI	CCNNNNNNNGG	5 cut(s)	186, 210, 789, 2199, 2816
BseMI	GCAATG	5 cut(s)	1278, 2250, 2571, 2643, 2859
BseMII	CTCAG	5 cut(s)	126, 1440, 1530, 1637, 2052
BseSI	GKGCMC	1 cut(s)	1936
BsgI	GTGCAG	1 cut(s)	2652
Bsh1236I	CGCG	5 cut(s)	228, 293, 306, 2008, 2943
Bsh1285I	CGRYCG	1 cut(s)	637
BshNI	GGYRCC	1 cut(s)	1300
BsiEI	CGRYCG	1 cut(s)	637
BsiHKAI	GWGCWC	5 cut(s)	176, 999, 1936, 2247, 2383
BsiHKCI	CYCGRG	1 cut(s)	2382
BsiSI	CCGG	9 cut(s)	43, 61, 129, 186, 256, 601, 783, 905, 1022
BslFI	GGGAC	2 cut(s)	1198, 1984
BslI	CCNNNNNNNGG	5 cut(s)	186, 210, 789, 2199, 2816
BsmAI	GTCTC	6 cut(s)	107, 290, 302, 666, 1193, 2568
BsmBI	CGTCTC	2 cut(s)	302, 2568
BsmFI	GGGAC	2 cut(s)	1198, 1984
Bso31I	GGTCTC	1 cut(s)	107
BsoBI	CYCGRG	1 cut(s)	2382
Bsp119I	TTCGAA	1 cut(s)	564
Bsp1286I	GDGCHC	6 cut(s)	176, 999, 1936, 2247, 2383, 2803
Bsp1407I	TGTACA	2 cut(s)	457, 1642
Bsp143I	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
Bsp19I	CCATGG	5 cut(s)	921, 1078, 1773, 2179, 2834
Bsp68I	TCGCGA	2 cut(s)	228, 306
BspACI	CCGC	9 cut(s)	104, 177, 293, 1313, 1655, 1660, 2255, 2291, 2943
BspCNI	CTCAG	5 cut(s)	127, 1439, 1529, 1636, 2053
BspFNI	CGCG	5 cut(s)	228, 293, 306, 2008, 2943
BspHI	TCATGA	2 cut(s)	984, 999
BspLI	GGNNCC	6 cut(s)	65, 215, 787, 1302, 2259, 2800
BspMAI	CTGCAG	3 cut(s)	586, 2059, 2797
BspPI	GGATC	3 cut(s)	503, 1684, 2357
BspQI	GCTCTTC	1 cut(s)	2672
BspT104I	TTCGAA	1 cut(s)	564
BspT107I	GGYRCC	1 cut(s)	1300
BspTNI	GGTCTC	1 cut(s)	107
BsrDI	GCAATG	5 cut(s)	1278, 2250, 2571, 2643, 2859
BsrGI	TGTACA	2 cut(s)	457, 1642
BssMI	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
BssNI	GRCGYC	1 cut(s)	243
BssT1I	CCWWGG	6 cut(s)	921, 1078, 1231, 1773, 2179, 2834
Bst4CI	ACNGT	4 cut(s)	427, 660, 2491, 2560
Bst6I	CTCTTC	6 cut(s)	105, 669, 826, 2124, 2268, 2672
BstACI	GRCGYC	1 cut(s)	243
BstAPI	GCANNNNNTGC	3 cut(s)	171, 414, 2630
BstAUI	TGTACA	2 cut(s)	457, 1642
BstBI	TTCGAA	1 cut(s)	564
BstC8I	GCNNGC	1 cut(s)	1828
BstDSI	CCRYGG	5 cut(s)	921, 1078, 1773, 2179, 2834
BstF5I	GGATG	2 cut(s)	1102, 2335
BstFNI	CGCG	5 cut(s)	228, 293, 306, 2008, 2943
BstHHI	GCGC	3 cut(s)	262, 1077, 1889
BstKTI	GATC	6 cut(s)	511, 637, 1692, 1908, 2365, 2515
BstMAI	GTCTC	6 cut(s)	107, 290, 302, 666, 1193, 2568
BstMBI	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
BstMCI	CGRYCG	1 cut(s)	637
BstNSI	RCATGY	1 cut(s)	1830
BstSFI	CTRYAG	4 cut(s)	582, 690, 2055, 2793
BstSLI	GKGCMC	1 cut(s)	1936
BstUI	CGCG	5 cut(s)	228, 293, 306, 2008, 2943
BstV2I	GAAGAC	6 cut(s)	324, 558, 919, 1271, 2130, 2538
BstXI	CCANNNNNNTGG	3 cut(s)	16, 100, 1291
BsuI	GTATCC	3 cut(s)	642, 1755, 2747
BtgI	CCRYGG	5 cut(s)	921, 1078, 1773, 2179, 2834
BtrI	CACGTC	1 cut(s)	171
BtsCI	GGATG	2 cut(s)	1102, 2335
BtsI	GCAGTG	1 cut(s)	1070
BtsIMutI	CAGTG	8 cut(s)	423, 555, 1070, 1682, 1998, 2366, 2556, 2878
BtuMI	TCGCGA	2 cut(s)	228, 306
Cac8I	GCNNGC	1 cut(s)	1828
CciI	TCATGA	2 cut(s)	984, 999
CfoI	GCGC	3 cut(s)	262, 1077, 1889
Cfr13I	GGNCC	6 cut(s)	19, 63, 630, 749, 786, 1657
CpoI	CGGWCCG	1 cut(s)	1657
Csp6I	GTAC	6 cut(s)	458, 1240, 1530, 1604, 1643, 2939
CspI	CGGWCCG	1 cut(s)	1657
CviQI	GTAC	6 cut(s)	458, 1240, 1530, 1604, 1643, 2939
DpnI	GATC	6 cut(s)	510, 636, 1691, 1907, 2364, 2514
DpnII	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
DriI	GACNNNNNGTC	1 cut(s)	2542
EaeI	YGGCCR	4 cut(s)	1014, 1629, 2144, 2176
Eam1104I	CTCTTC	6 cut(s)	105, 669, 826, 2124, 2268, 2672
Eam1105I	GACNNNNNGTC	1 cut(s)	2542
EarI	CTCTTC	6 cut(s)	105, 669, 826, 2124, 2268, 2672
EciI	GGCGGA	1 cut(s)	166
Ecl136II	GAGCTC	1 cut(s)	997
Eco130I	CCWWGG	6 cut(s)	921, 1078, 1231, 1773, 2179, 2834
Eco147I	AGGCCT	1 cut(s)	1845
Eco24I	GRGCYC	2 cut(s)	999, 2803
Eco31I	GGTCTC	1 cut(s)	107
Eco47I	GGWCC	3 cut(s)	630, 786, 1657
Eco53kI	GAGCTC	1 cut(s)	997
Eco57I	CTGAAG	2 cut(s)	129, 2532
Eco88I	CYCGRG	1 cut(s)	2382
EcoICRI	GAGCTC	1 cut(s)	997
EcoRI	GAATTC	4 cut(s)	384, 2036, 2481, 2781
EcoT14I	CCWWGG	6 cut(s)	921, 1078, 1231, 1773, 2179, 2834
EcoT22I	ATGCAT	1 cut(s)	29
EcoT38I	GRGCYC	2 cut(s)	999, 2803
ErhI	CCWWGG	6 cut(s)	921, 1078, 1231, 1773, 2179, 2834
Esp3I	CGTCTC	2 cut(s)	302, 2568
FalI	AAGNNNNNCTT	4 cut(s)	2265, 2297, 2669, 2701
FaqI	GGGAC	2 cut(s)	1198, 1984
FbaI	TGATCA	1 cut(s)	1905
FblI	GTMKAC	3 cut(s)	240, 693, 1143
FokI	GGATG	2 cut(s)	1109, 2342
FriOI	GRGCYC	2 cut(s)	999, 2803
FspBI	CTAG	7 cut(s)	959, 1203, 1244, 1328, 1569, 1847, 2672
GlaI	GCGC	3 cut(s)	261, 1076, 1888
GsuI	CTGGAG	5 cut(s)	1155, 1781, 1899, 2364, 2865
HapII	CCGG	9 cut(s)	43, 61, 129, 186, 256, 601, 783, 905, 1022
HhaI	GCGC	3 cut(s)	262, 1077, 1889
Hin1I	GRCGYC	1 cut(s)	243
Hin6I	GCGC	3 cut(s)	260, 1075, 1887
HinP1I	GCGC	3 cut(s)	260, 1075, 1887
HincII	GTYRAC	4 cut(s)	241, 289, 1323, 2002
HindII	GTYRAC	4 cut(s)	241, 289, 1323, 2002
HpaI	GTTAAC	1 cut(s)	289
HpaII	CCGG	9 cut(s)	43, 61, 129, 186, 256, 601, 783, 905, 1022
Hpy99I	CGWCG	1 cut(s)	245
HpyAV	CCTTC	7 cut(s)	193, 560, 1331, 2182, 2288, 2527, 2737
HpyCH4III	ACNGT	4 cut(s)	427, 660, 2491, 2560
HpyCH4IV	ACGT	5 cut(s)	170, 243, 285, 321, 2772
HpySE526I	ACGT	5 cut(s)	170, 243, 285, 321, 2772
Hsp92I	GRCGYC	1 cut(s)	243
HspAI	GCGC	3 cut(s)	260, 1075, 1887
Ksp22I	TGATCA	1 cut(s)	1905
KspAI	GTTAAC	1 cut(s)	289
Kzo9I	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
LguI	GCTCTTC	1 cut(s)	2672
LmnI	GCTCC	9 cut(s)	131, 179, 219, 994, 1642, 2150, 2242, 2798, 2846
LweI	GCATC	2 cut(s)	1264, 2257
MaeI	CTAG	7 cut(s)	959, 1203, 1244, 1328, 1569, 1847, 2672
MaeII	ACGT	5 cut(s)	170, 243, 285, 321, 2772
MaeIII	GTNAC	3 cut(s)	1438, 2431, 2438
MalI	GATC	6 cut(s)	510, 636, 1691, 1907, 2364, 2514
MboI	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
MfeI	CAATTG	3 cut(s)	447, 2262, 2625
MhlI	GDGCHC	6 cut(s)	176, 999, 1936, 2247, 2383, 2803
MlsI	TGGCCA	4 cut(s)	1016, 1631, 2146, 2178
MluNI	TGGCCA	4 cut(s)	1016, 1631, 2146, 2178
MlyI	GAGTC	6 cut(s)	882, 1508, 1625, 1966, 2292, 2582
MmeI	TCCRAC	3 cut(s)	304, 1852, 2458
Mox20I	TGGCCA	4 cut(s)	1016, 1631, 2146, 2178
Mph1103I	ATGCAT	1 cut(s)	29
MroXI	GAANNNNTTC	1 cut(s)	2726
MscI	TGGCCA	4 cut(s)	1016, 1631, 2146, 2178
MseI	TTAA	9 cut(s)	288, 345, 858, 914, 948, 1253, 1398, 1461, 2318
MslI	CAYNNNNRTG	5 cut(s)	164, 767, 1022, 1461, 2429
Msp20I	TGGCCA	4 cut(s)	1016, 1631, 2146, 2178
MspA1I	CMGCKG	5 cut(s)	535, 1313, 1862, 2060, 2660
MspI	CCGG	9 cut(s)	43, 61, 129, 186, 256, 601, 783, 905, 1022
MunI	CAATTG	3 cut(s)	447, 2262, 2625
MvnI	CGCG	5 cut(s)	228, 293, 306, 2008, 2943
NciI	CCSGG	6 cut(s)	44, 61, 187, 257, 784, 1022
NcoI	CCATGG	5 cut(s)	921, 1078, 1773, 2179, 2834
NdeII	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
NlaIV	GGNNCC	6 cut(s)	65, 215, 787, 1302, 2259, 2800
NmuCI	GTSAC	2 cut(s)	2431, 2438
NruI	TCGCGA	2 cut(s)	228, 306
NsiI	ATGCAT	1 cut(s)	29
NspI	RCATGY	1 cut(s)	1830
NspV	TTCGAA	1 cut(s)	564
OliI	CACNNNNGTG	1 cut(s)	1022
PaeI	GCATGC	1 cut(s)	1830
PaeR7I	CTCGAG	1 cut(s)	2382
PagI	TCATGA	2 cut(s)	984, 999
PasI	CCCWGGG	1 cut(s)	218
PceI	AGGCCT	1 cut(s)	1845
PciSI	GCTCTTC	1 cut(s)	2672
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PdmI	GAANNNNTTC	1 cut(s)	2726
PflFI	GACNNNGTC	1 cut(s)	1517
PflMI	CCANNNNNTGG	1 cut(s)	2816
PfoI	TCCNGGA	3 cut(s)	814, 940, 2717
Ple19I	CGATCG	1 cut(s)	637
PleI	GAGTC	6 cut(s)	881, 1508, 1624, 1966, 2292, 2582
PpsI	GAGTC	6 cut(s)	881, 1508, 1624, 1966, 2292, 2582
PshBI	ATTAAT	1 cut(s)	345
PsiI	TTATAA	1 cut(s)	2907
Psp124BI	GAGCTC	1 cut(s)	999
Psp1406I	AACGTT	1 cut(s)	2772
PspN4I	GGNNCC	6 cut(s)	65, 215, 787, 1302, 2259, 2800
PspPI	GGNCC	6 cut(s)	19, 63, 630, 749, 786, 1657
PstI	CTGCAG	3 cut(s)	586, 2059, 2797
PsyI	GACNNNGTC	1 cut(s)	1517
PvuI	CGATCG	1 cut(s)	637
PvuII	CAGCTG	4 cut(s)	535, 1862, 2060, 2660
RruI	TCGCGA	2 cut(s)	228, 306
RsaI	GTAC	6 cut(s)	459, 1241, 1531, 1605, 1644, 2940
RsaNI	GTAC	6 cut(s)	458, 1240, 1530, 1604, 1643, 2939
RseI	CAYNNNNRTG	5 cut(s)	164, 767, 1022, 1461, 2429
Rsr2I	CGGWCCG	1 cut(s)	1657
RsrII	CGGWCCG	1 cut(s)	1657
SacI	GAGCTC	1 cut(s)	999
SalI	GTCGAC	1 cut(s)	239
SapI	GCTCTTC	1 cut(s)	2672
SaqAI	TTAA	9 cut(s)	288, 345, 858, 914, 948, 1253, 1398, 1461, 2318
Sau3AI	GATC	6 cut(s)	508, 634, 1689, 1905, 2362, 2512
Sau96I	GGNCC	6 cut(s)	19, 63, 630, 749, 786, 1657
SchI	GAGTC	6 cut(s)	882, 1508, 1625, 1966, 2292, 2582
SduI	GDGCHC	6 cut(s)	176, 999, 1936, 2247, 2383, 2803
SfaNI	GCATC	2 cut(s)	1264, 2257
SfcI	CTRYAG	4 cut(s)	582, 690, 2055, 2793
Sfr274I	CTCGAG	1 cut(s)	2382
SfuI	TTCGAA	1 cut(s)	564
SinI	GGWCC	3 cut(s)	630, 786, 1657
SlaI	CTCGAG	1 cut(s)	2382
SmiMI	CAYNNNNRTG	5 cut(s)	164, 767, 1022, 1461, 2429
SmlI	CTYRAG	2 cut(s)	2382, 2402
SmoI	CTYRAG	2 cut(s)	2382, 2402
SpeI	ACTAGT	1 cut(s)	1202
SphI	GCATGC	1 cut(s)	1830
SseBI	AGGCCT	1 cut(s)	1845
SsiI	CCGC	9 cut(s)	104, 177, 293, 1313, 1655, 1660, 2255, 2291, 2943
SspMI	CTAG	7 cut(s)	959, 1203, 1244, 1328, 1569, 1847, 2672
SstI	GAGCTC	1 cut(s)	999
StuI	AGGCCT	1 cut(s)	1845
StyI	CCWWGG	6 cut(s)	921, 1078, 1231, 1773, 2179, 2834
TaaI	ACNGT	4 cut(s)	427, 660, 2491, 2560
TaiI	ACGT	5 cut(s)	173, 246, 288, 324, 2775
TaqI	TCGA	7 cut(s)	195, 240, 419, 564, 1197, 1959, 2383
TaqII	GACCGA	2 cut(s)	647, 1129
TatI	WGTACW	2 cut(s)	457, 1642
TauI	GCSGC	2 cut(s)	107, 1316
Tru1I	TTAA	9 cut(s)	288, 345, 858, 914, 948, 1253, 1398, 1461, 2318
Tru9I	TTAA	9 cut(s)	288, 345, 858, 914, 948, 1253, 1398, 1461, 2318
TscAI	CASTG	8 cut(s)	430, 562, 1077, 1689, 1998, 2373, 2563, 2878
TseFI	GTSAC	2 cut(s)	2431, 2438
Tsp45I	GTSAC	2 cut(s)	2431, 2438
TspGWI	ACGGA	2 cut(s)	2592, 2729
TspRI	CASTG	8 cut(s)	430, 562, 1077, 1689, 1998, 2373, 2563, 2878
Tth111I	GACNNNGTC	1 cut(s)	1517
Van91I	CCANNNNNTGG	1 cut(s)	2816
VneI	GTGCAC	1 cut(s)	1932
VpaK11BI	GGWCC	3 cut(s)	630, 786, 1657
VspI	ATTAAT	1 cut(s)	345
XapI	RAATTY	7 cut(s)	384, 1806, 2036, 2313, 2458, 2481, 2781
XceI	RCATGY	1 cut(s)	1830
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1864
XhoI	CTCGAG	1 cut(s)	2382
XmiI	GTMKAC	3 cut(s)	240, 693, 1143
XmnI	GAANNNNTTC	1 cut(s)	2726
XspI	CTAG	7 cut(s)	959, 1203, 1244, 1328, 1569, 1847, 2672
ZraI	GACGTC	1 cut(s)	244
Zsp2I	ATGCAT	1 cut(s)	29

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.