Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002025

Physical Location & Seq

Genomic Coordinates Reverse (-)

15613237 .. 15617670

Gene Structure 4434 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17693

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2949 bp

ATGAGATCGTTAAAGATGGCGGACCGCGGTGGCAGCGATTTGTCGCCGCGGCCTCACTACCCCTCCATGCCAAAGATTCCGAAGGGTGTGGTGACGGAAGAGACCACTATGGTGGTGGGCACCGAGTCCAAGGCCGTGTTCTCAGTCATCGGCATGACCTGCTCCGCCTGCGCGGGATCGGTAGAGAAGGCTGTGAAGAGGCTACCCGGGATTCGCGAGGCGGTGGTCGACGTGCTCAACAACCGTGCCCAAGTCATGTTCTTCCCCAATTTCGTTAACGCAGAGACTATCCGTGAGACTATTGAAGATGTTGGATTTCAAGCAACATTGATTGCTGATGAGGGAAACGAGAAGCCCACGTTGGTGTGCAGAATAAGGATCAAAGGAATGACTTGCACTTCTTGCTCTTCCACTGTTGAATCAGCTTTGCAGGCAGTTCATGGTGTACAAAAAGCCCAAGTTGCCTTAGCAACTGAAGAAGCAGATGTCCACTATGATCCAAAGATAGTGAGCTGCAATCAGCTGATGGTAGCCATTGAAGACACTGGATTCGAAGCCATACTTATTAATTCAGGTGAAGACATGAGCAAGATAGATCTTAAAGTTGACGGTGTAAGGACCAATCATTCAATGAGAATACTTGAACAGTCTCTTCAAGCACTCCCTGGGGTGCAAGGTGTAGACATACATCATGATGACAGAAAAATTTCCCTGTCTTACAAGCCAGATATGACAGGGCCCCGAAATTTCATCAATGTGATTGAAACAACTGGATCCAGGCGTTTCAGGGCAAAAATTTATCCAGGCGGTGGAGCAGGAAGAGAAAATCATAGGAAGGAGGAAATTCAGCAGTACTACAGAGTCTTTCTCTGGAGTTTGATTTTCACCATTCCAGTATTTTTAACCTCCATGGTCTTCATGTACATCCCTGGACTTAAGCCTGGCTTAGACAAGAAAGTAGTAAATATGCTCAGCATTGGGGAGCTTGTAAGGTGGATTCTGTCTACTCCGGTGCAGTTCATCATAGGCCGGAGGTTCTATACTGGGGCATACAAGTCATTGCGCCATGGTTCTGCTAATATGGATGTGTTAATTGCCTTGGGAACAAATGCAGCATATTTCTATTCAGTCTACTCCGTACTGAGAGCTGCCACCTCCCCACATTTTAAGGGTACAGATTTCTTTGAGACTAGTGCAATGCTAATCTCATTCATTCTCTTAGGGAAGTACCTAGAGGTGTTAGCTAAGGGGAAGACATCTGATGCTATTGCCAAACTGATGGATTTGGCACCTGAAACAGCCACTTTGTTGACTCTAGACGAAGAAGGAAACATTTTAGGTGAAGAAGAAATTGATGGTCGGTTGATACAAAAGAACGATGTCATCAAAATTATTCCAGGGGCGAAGGTAGCTTCGGATGGTTATGTGATATGGGGACAAAGCCATGTAAATGAGAGTATGATAACAGGAGAAGCGCGTCCAGTGGCAAAAAGGAAGGGTGATACAGTCATTGGAGGTACTGTAAATGAAAATGGTGTGTTGCATATCAAGGCAACACGGGTTGGATCAGAAAGTTCCCTCGCGCAGATTGTACGGCTTGTTGAGTCAGCTCAGATGGCAAAAGCTCCTGTTCAGAAGTTTGCTGACCGCATTTCTAAATTCTTTGTGCCACTGGTGATCATGCTTTCATTCTCTACCTGGCTTTCATGGTTTTTGGCTGGAAAATTCCATGGCTACCCAAAATCTTGGATACCGAAGTCCATGGATAGCTTTCAGCTTGCTCTCCAGTTTGGGATCTCTGTCATGGTTATTGCATGCCCTTGTGCTCTAGGCCTAGCAACTCCTACTGCTGTCATGGTTGGTACTGGAGTCGGTGCATCCCAAGGTGTACTGATCAAAGGAGGTCAAGCATTAGAAAGTGCACATAAGGTGGACTGCATTGTGTTCGACAAGACAGGGACTCTTACAATTGGGAAGCCACTGGTTGTTAACACACGACTCCTGAAAAATATGGTGCTTCAAGAATTCTATGAACTTGTTGCTGCAGCAGAGGTTAACAGTGAACACCCCTTGGCCAAGGCCATTGTTGAGTATGCCAAAAAATTCAGAGAAGATGAAGAGAATCCAGCCGGGCCAGAAGCGCATGACTTTGCCTCCATTACTGGTCACGGGGTGAAGGCTATTGTTCGGGGCAGGGAAATAATTGTGGGGAACAAGAGCTTGATGGTGGACCAGAACATTGCAGTTCCACTCGATGCAGAAGACTACCTAGCAGAAGCTGAAGGGCTGGCTCAAACTGGAATTCTAGTAGCCATAGATGGAGAAGTGGCCGGAGTTCTAGCAGTATCTGATCCACTGAAACCAGGTGCTCAAGAAGTAATTACCATACTCAAGTCAATGAATGTTAGAAGCATAATGGTGACAGGTGACAATTGGGGAACTGCAAATTCTATTGCCAATGAAGTTGGTATTGATACTGTTATAGCCGAATCGAAACCTGACCAGAAAGCAGATAAAGTGAAGGAATTGCAGGCTTCAGGCTACACTGTGGCGACGGTGGGAGATGGCATCAATGACTCACCAGCACTTGTGGCGGCAGATGTAGGAATGGCAATTGGTGCTGGCACTGACATTGCAATTGAGGCAGCAGACATTGTGCTAATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGATCTTTCAAGGAAAACCTTCACCCGTATTCGTTTGAACTACATTTGGGCTTTGGGATATAATGTGCTTGGGATCCCAATAGCTGCAGGAGTTCTCTTCCCATCCACTGGATTTCGCTTACCCCCTTGGATTGCTGGAGCTGCAATGGCTGCTTCTTCTGTCAGTGTTGTTTGCTGTTCATTGTTGTTGAAGAACTATAAGAGACCCAAGGAGCTGAATAACCTTGAGGTGCGTGGAATAGTGATCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0008150 GO:0008324 GO:0009636 GO:0010035 GO:0010038 GO:0010273 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046688 GO:0046873 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061687 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0097501 GO:0098655 GO:0098660 GO:0098662 GO:0098754 GO:0099131 GO:0099132 GO:1990169

KEGG Pathways

Metabolic & Signaling

ko01524 ko04016 map01524 map04016

Pfam Domains

Protein Families

E1-E2_ATPase HMA Hydrolase

Protein Analysis

982

Amino Acids

106.07

Weight (kDa)

6.22

Isoelectric Point (pI)

29.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMA	PF00403	46 - 106	2.1e-14	Heavy-metal-associated domain
HMA	PF00403	125 - 185	3.2e-13	Heavy-metal-associated domain
E1-E2_ATPase	PF00122	429 - 535	2.1e-23	P-type ATPase actuator domain
Hydrolase	PF00702	644 - 867	1.1e-32	haloacid dehalogenase-like hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63440
fragaria_vesca	FvH4_5g02090 FvH4_5g02090 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091 FvH4_5g02091
malus_domestica	MD06G1080800.v1.1 MD06G1080900.v1.1 MD14G1102600.v1.1
prunus_persica	Prupe.5G097900_v2.0.a1 Prupe.5G097900_v2.0.a1 Prupe.5G098000_v2.0.a1
pyrus_communis	pycom06g07780 pycom06g07790 pycom14g09890
rosa_chinensis	RchiOBHm_Chr7g0197781 RchiOBHm_Chr7g0198111 RchiOBHm_Chr7g0198141
rosa_laevigata	RLG00000003885 RLG00000003888 RLG00000019170
rosa_multiflora	Rmu_sc0000221.1_g000018 Rmu_sc0000221.1_g000030 Rmu_sc0006732.1_g000016
rosa_roxburghii	Rroxscaffold_3G00257940 Rroxscaffold_3G00257970 Rroxscaffold_3G00257990
rosa_rugosa	Rorug07G0045700 Rorug07G0045700 Rorug07G0045800 Rorug07G0045800 Rorug07G0045900
rosa_samantha	Rh7AG169100 Rh7AG169200 Rh7BG169900 Rh7BG172300 Rh7CG178600 Rh7CG178700 Rh7DG169200 Rh7DG171400 Rh7DG171800
rosa_wichuraiana	Rw7G014570 Rw7G014780 Rw7G014790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	167
AccB1I	GGYRCC	2 cut(s)	119, 1288
AccB7I	CCANNNNNTGG	2 cut(s)	809, 2804
AccI	GTMKAC	4 cut(s)	228, 681, 1004, 1131
AccII	CGCG	6 cut(s)	27, 49, 173, 216, 1477, 1583
AcoI	YGGCCR	2 cut(s)	2073, 2328
AcuI	CTGAAG	3 cut(s)	495, 2301, 2520
AdeI	CACNNNGTG	1 cut(s)	2173
AfiI	CCNNNNNNNGG	2 cut(s)	809, 2804
AflII	CTTAAG	1 cut(s)	935
AhlI	ACTAGT	1 cut(s)	1190
AjiI	CACGTC	1 cut(s)	232
AjnI	CCWGG	8 cut(s)	664, 776, 802, 928, 940, 1396, 1697, 2362
AjuI	GAANNNNNNNTTGG	6 cut(s)	122, 154, 344, 376, 2657, 2689
AleI	CACNNNNGTG	2 cut(s)	110, 362
Alw21I	GWGCWC	4 cut(s)	237, 1828, 1924, 2371
Alw26I	GTCTC	6 cut(s)	95, 278, 290, 654, 1181, 2893
Alw44I	GTGCAC	1 cut(s)	1920
AlwNI	CAGNNNCTG	2 cut(s)	2279, 2348
Ama87I	CYCGRG	1 cut(s)	206
AoxI	GGCC	9 cut(s)	50, 132, 737, 1027, 1831, 2073, 2079, 2132, 2328
ApaI	GGGCCC	1 cut(s)	741
ApaLI	GTGCAC	1 cut(s)	1920
ArsI	GACNNNNNNTTYG	2 cut(s)	533, 565
AseI	ATTAAT	1 cut(s)	567
Asp700I	GAANNNNTTC	2 cut(s)	706, 2714
AspLEI	GCGC	5 cut(s)	173, 1065, 1477, 1585, 2143
AspS9I	GGNCC	6 cut(s)	22, 618, 737, 738, 2132, 2230
AsuC2I	CCSGG	3 cut(s)	207, 208, 2131
AsuII	TTCGAA	1 cut(s)	552
AvaI	CYCGRG	1 cut(s)	206
AvaII	GGWCC	3 cut(s)	22, 618, 2230
BaeGI	GKGCMC	4 cut(s)	122, 250, 741, 1924
BaeI	ACNNNNGTAYC	4 cut(s)	1742, 1775, 1854, 1887
BalI	TGGCCA	1 cut(s)	2075
BamHI	GGATCC	2 cut(s)	773, 2769
BanI	GGYRCC	2 cut(s)	119, 1288
BanII	GRGCYC	1 cut(s)	741
BbsI	GAAGAC	5 cut(s)	546, 585, 907, 1259, 2268
Bbv12I	GWGCWC	4 cut(s)	237, 1828, 1924, 2371
BceAI	ACGGC	2 cut(s)	119, 1610
BcgI	CGANNNNNNTGC	2 cut(s)	1927, 1961
BciT130I	CCWGG	8 cut(s)	666, 778, 804, 930, 942, 1398, 1699, 2364
BciVI	GTATCC	1 cut(s)	1743
BclI	TGATCA	2 cut(s)	1677, 1893
BcnI	CCSGG	3 cut(s)	207, 208, 2131
BcoDI	GTCTC	6 cut(s)	95, 278, 290, 654, 1181, 2893
BcuI	ACTAGT	1 cut(s)	1190
BfaI	CTAG	8 cut(s)	1191, 1232, 1316, 1829, 1835, 2270, 2306, 2339
BfmI	CTRYAG	3 cut(s)	856, 2043, 2781
BfrI	CTTAAG	1 cut(s)	935
BfuAI	ACCTGC	1 cut(s)	167
BfuI	GTATCC	1 cut(s)	1743
BglII	AGATCT	1 cut(s)	595
BlpI	GCTNAGC	1 cut(s)	971
BmcAI	AGTACT	1 cut(s)	854
Bme18I	GGWCC	3 cut(s)	22, 618, 2230
BmeT110I	CYCGRG	1 cut(s)	206
BmgBI	CACGTC	1 cut(s)	232
BmgT120I	GGNCC	6 cut(s)	22, 618, 737, 738, 2132, 2230
BmiI	GGNNCC	6 cut(s)	121, 739, 740, 775, 1290, 2771
BmrI	ACTGGG	1 cut(s)	1053
BmsI	GCATC	4 cut(s)	1252, 1886, 2245, 2577
BmuI	ACTGGG	1 cut(s)	1053
BpiI	GAAGAC	5 cut(s)	546, 585, 907, 1259, 2268
BplI	GAGNNNNNCTC	2 cut(s)	852, 884
BpmI	CTGGAG	4 cut(s)	892, 1769, 1887, 2853
Bpu10I	CCTNAGC	2 cut(s)	466, 1245
Bpu1102I	GCTNAGC	1 cut(s)	971
Bpu14I	TTCGAA	1 cut(s)	552
BpuEI	CTTGAG	3 cut(s)	2355, 2375, 2942
BpuMI	CCSGG	3 cut(s)	207, 208, 2131
BsaI	GGTCTC	2 cut(s)	95, 2893
BsaWI	WCCGGW	1 cut(s)	1009
BsaXI	ACNNNNNCTCC	6 cut(s)	47, 77, 1506, 1536, 2138, 2168
Bsc4I	CCNNNNNNNGG	2 cut(s)	809, 2804
Bse3DI	GCAATG	5 cut(s)	1058, 1203, 2238, 2631, 2847
BseBI	CCWGG	8 cut(s)	666, 778, 804, 930, 942, 1398, 1699, 2364
BseGI	GGATG	6 cut(s)	924, 1090, 1423, 1877, 2686, 2798
BseLI	CCNNNNNNNGG	2 cut(s)	809, 2804
BseMI	GCAATG	5 cut(s)	1058, 1203, 2238, 2631, 2847
BseMII	CTCAG	4 cut(s)	156, 985, 1133, 1625
BseSI	GKGCMC	4 cut(s)	122, 250, 741, 1924
BsgI	GTGCAG	2 cut(s)	388, 1034
Bsh1236I	CGCG	6 cut(s)	27, 49, 173, 216, 1477, 1583
BshFI	GGCC	9 cut(s)	52, 134, 739, 1029, 1833, 2075, 2081, 2134, 2330
BshNI	GGYRCC	2 cut(s)	119, 1288
BsiHKAI	GWGCWC	4 cut(s)	237, 1828, 1924, 2371
BsiHKCI	CYCGRG	1 cut(s)	206
BsiSI	CCGG	5 cut(s)	207, 1010, 1030, 2130, 2331
BslFI	GGGAC	2 cut(s)	1449, 1972
BslI	CCNNNNNNNGG	2 cut(s)	809, 2804
BsmAI	GTCTC	6 cut(s)	95, 278, 290, 654, 1181, 2893
BsmFI	GGGAC	2 cut(s)	1449, 1972
BsnI	GGCC	9 cut(s)	52, 134, 739, 1029, 1833, 2075, 2081, 2134, 2330
Bso31I	GGTCTC	2 cut(s)	95, 2893
BsoBI	CYCGRG	1 cut(s)	206
Bsp119I	TTCGAA	1 cut(s)	552
Bsp120I	GGGCCC	1 cut(s)	737
Bsp1286I	GDGCHC	7 cut(s)	122, 237, 250, 741, 1828, 1924, 2371
Bsp1407I	TGTACA	2 cut(s)	445, 921
Bsp1720I	GCTNAGC	1 cut(s)	971
Bsp19I	CCATGG	4 cut(s)	909, 1066, 1729, 1761
Bsp68I	TCGCGA	1 cut(s)	216
BspANI	GGCC	9 cut(s)	52, 134, 739, 1029, 1833, 2075, 2081, 2134, 2330
BspCNI	CTCAG	4 cut(s)	155, 984, 1134, 1624
BspFNI	CGCG	6 cut(s)	27, 49, 173, 216, 1477, 1583
BspHI	TCATGA	1 cut(s)	691
BspLI	GGNNCC	6 cut(s)	121, 739, 740, 775, 1290, 2771
BspMAI	CTGCAG	2 cut(s)	2047, 2785
BspMI	ACCTGC	1 cut(s)	167
BspQI	GCTCTTC	2 cut(s)	412, 2660
BspT104I	TTCGAA	1 cut(s)	552
BspT107I	GGYRCC	2 cut(s)	119, 1288
BspTI	CTTAAG	1 cut(s)	935
BspTNI	GGTCTC	2 cut(s)	95, 2893
BsrDI	GCAATG	5 cut(s)	1058, 1203, 2238, 2631, 2847
BsrGI	TGTACA	2 cut(s)	445, 921
Bst2UI	CCWGG	8 cut(s)	666, 778, 804, 930, 942, 1398, 1699, 2364
Bst6I	CTCTTC	8 cut(s)	93, 191, 412, 657, 814, 2112, 2660, 2798
BstAFI	CTTAAG	1 cut(s)	935
BstAPI	GCANNNNNTGC	4 cut(s)	159, 402, 2618, 2846
BstAUI	TGTACA	2 cut(s)	445, 921
BstBI	TTCGAA	1 cut(s)	552
BstC8I	GCNNGC	7 cut(s)	169, 432, 1779, 1816, 2289, 2532, 2623
BstDEI	CTNAG	8 cut(s)	142, 466, 946, 971, 1142, 1219, 1245, 1611
BstDSI	CCRYGG	6 cut(s)	25, 47, 909, 1066, 1729, 1761
BstF5I	GGATG	6 cut(s)	924, 1090, 1423, 1877, 2686, 2798
BstFNI	CGCG	6 cut(s)	27, 49, 173, 216, 1477, 1583
BstHHI	GCGC	5 cut(s)	173, 1065, 1477, 1585, 2143
BstMAI	GTCTC	6 cut(s)	95, 278, 290, 654, 1181, 2893
BstNI	CCWGG	8 cut(s)	666, 778, 804, 930, 942, 1398, 1699, 2364
BstNSI	RCATGY	1 cut(s)	1818
BstSFI	CTRYAG	3 cut(s)	856, 2043, 2781
BstSLI	GKGCMC	4 cut(s)	122, 250, 741, 1924
BstUI	CGCG	6 cut(s)	27, 49, 173, 216, 1477, 1583
BstV2I	GAAGAC	5 cut(s)	546, 585, 907, 1259, 2268
BstX2I	RGATCY	4 cut(s)	595, 773, 1794, 2769
BstXI	CCANNNNNNTGG	3 cut(s)	112, 1279, 1746
BstYI	RGATCY	4 cut(s)	595, 773, 1794, 2769
BsuI	GTATCC	1 cut(s)	1743
BsuRI	GGCC	9 cut(s)	52, 134, 739, 1029, 1833, 2075, 2081, 2134, 2330
BtgI	CCRYGG	6 cut(s)	25, 47, 909, 1066, 1729, 1761
BtrI	CACGTC	1 cut(s)	232
BtsCI	GGATG	6 cut(s)	924, 1090, 1423, 1877, 2686, 2798
BtuMI	TCGCGA	1 cut(s)	216
BveI	ACCTGC	1 cut(s)	167
Cac8I	GCNNGC	7 cut(s)	169, 432, 1779, 1816, 2289, 2532, 2623
CaiI	CAGNNNCTG	2 cut(s)	2279, 2348
CciI	TCATGA	1 cut(s)	691
CfoI	GCGC	5 cut(s)	173, 1065, 1477, 1585, 2143
Cfr13I	GGNCC	6 cut(s)	22, 618, 737, 738, 2132, 2230
Cfr42I	CCGCGG	2 cut(s)	28, 50
Cfr9I	CCCGGG	1 cut(s)	206
CpoI	CGGWCCG	1 cut(s)	22
CseI	GACGC	1 cut(s)	1466
CsiI	ACCWGGT	1 cut(s)	2362
CspI	CGGWCCG	1 cut(s)	22
DdeI	CTNAG	8 cut(s)	142, 466, 946, 971, 1142, 1219, 1245, 1611
DraIII	CACNNNGTG	1 cut(s)	2173
EaeI	YGGCCR	2 cut(s)	2073, 2328
Eam1104I	CTCTTC	8 cut(s)	93, 191, 412, 657, 814, 2112, 2660, 2798
EarI	CTCTTC	8 cut(s)	93, 191, 412, 657, 814, 2112, 2660, 2798
EciI	GGCGGA	2 cut(s)	35, 154
Eco147I	AGGCCT	1 cut(s)	1833
Eco24I	GRGCYC	1 cut(s)	741
Eco31I	GGTCTC	2 cut(s)	95, 2893
Eco47I	GGWCC	3 cut(s)	22, 618, 2230
Eco57I	CTGAAG	3 cut(s)	495, 2301, 2520
Eco88I	CYCGRG	1 cut(s)	206
EcoO109I	RGGNCCY	2 cut(s)	737, 738
EcoRI	GAATTC	2 cut(s)	2024, 2301
EcoRII	CCWGG	8 cut(s)	664, 776, 802, 928, 940, 1396, 1697, 2362
EcoT38I	GRGCYC	1 cut(s)	741
FalI	AAGNNNNNCTT	6 cut(s)	546, 578, 929, 961, 2657, 2689
FaqI	GGGAC	2 cut(s)	1449, 1972
FauI	CCCGC	1 cut(s)	166
FbaI	TGATCA	2 cut(s)	1677, 1893
FblI	GTMKAC	4 cut(s)	228, 681, 1004, 1131
FokI	GGATG	6 cut(s)	911, 1097, 1430, 1864, 2693, 2785
FriOI	GRGCYC	1 cut(s)	741
FspBI	CTAG	8 cut(s)	1191, 1232, 1316, 1829, 1835, 2270, 2306, 2339
GlaI	GCGC	5 cut(s)	172, 1064, 1476, 1584, 2142
GsuI	CTGGAG	4 cut(s)	892, 1769, 1887, 2853
HaeIII	GGCC	9 cut(s)	52, 134, 739, 1029, 1833, 2075, 2081, 2134, 2330
HapII	CCGG	5 cut(s)	207, 1010, 1030, 2130, 2331
HgaI	GACGC	1 cut(s)	1466
HhaI	GCGC	5 cut(s)	173, 1065, 1477, 1585, 2143
Hin6I	GCGC	5 cut(s)	171, 1063, 1475, 1583, 2141
HinP1I	GCGC	5 cut(s)	171, 1063, 1475, 1583, 2141
HincII	GTYRAC	6 cut(s)	229, 277, 607, 1311, 1990, 2056
HindII	GTYRAC	6 cut(s)	229, 277, 607, 1311, 1990, 2056
HpaI	GTTAAC	3 cut(s)	277, 1990, 2056
HpaII	CCGG	5 cut(s)	207, 1010, 1030, 2130, 2331
Hpy188I	TCNGA	8 cut(s)	81, 1261, 1417, 1570, 1614, 1635, 2108, 2350
Hpy188III	TCNNGA	7 cut(s)	215, 692, 871, 1316, 2002, 2021, 2372
Hpy99I	CGWCG	2 cut(s)	233, 2557
HpyCH4IV	ACGT	2 cut(s)	231, 359
HpyF3I	CTNAG	8 cut(s)	142, 466, 946, 971, 1142, 1219, 1245, 1611
HpySE526I	ACGT	2 cut(s)	231, 359
HspAI	GCGC	5 cut(s)	171, 1063, 1475, 1583, 2141
Ksp22I	TGATCA	2 cut(s)	1677, 1893
KspAI	GTTAAC	3 cut(s)	277, 1990, 2056
KspI	CCGCGG	2 cut(s)	28, 50
LguI	GCTCTTC	2 cut(s)	412, 2660
LmnI	GCTCC	6 cut(s)	167, 812, 982, 1630, 2834, 2908
LweI	GCATC	4 cut(s)	1252, 1886, 2245, 2577
MabI	ACCWGGT	1 cut(s)	2362
MaeI	CTAG	8 cut(s)	1191, 1232, 1316, 1829, 1835, 2270, 2306, 2339
MaeII	ACGT	2 cut(s)	231, 359
MaeIII	GTNAC	4 cut(s)	91, 2165, 2419, 2426
MfeI	CAATTG	4 cut(s)	1968, 2431, 2613, 2637
MflI	RGATCY	4 cut(s)	595, 773, 1794, 2769
MhlI	GDGCHC	7 cut(s)	122, 237, 250, 741, 1828, 1924, 2371
MlsI	TGGCCA	1 cut(s)	2075
MluNI	TGGCCA	1 cut(s)	2075
MlyI	GAGTC	8 cut(s)	134, 870, 1306, 1613, 1878, 1954, 1992, 2570
MmeI	TCCRAC	2 cut(s)	292, 1543
Mox20I	TGGCCA	1 cut(s)	2075
MroXI	GAANNNNTTC	2 cut(s)	706, 2714
MscI	TGGCCA	1 cut(s)	2075
MslI	CAYNNNNRTG	7 cut(s)	110, 152, 362, 693, 755, 1449, 2417
Msp20I	TGGCCA	1 cut(s)	2075
MspA1I	CMGCKG	3 cut(s)	27, 49, 523
MspCI	CTTAAG	1 cut(s)	935
MspI	CCGG	5 cut(s)	207, 1010, 1030, 2130, 2331
MunI	CAATTG	4 cut(s)	1968, 2431, 2613, 2637
MvaI	CCWGG	8 cut(s)	666, 778, 804, 930, 942, 1398, 1699, 2364
MvnI	CGCG	6 cut(s)	27, 49, 173, 216, 1477, 1583
NciI	CCSGG	3 cut(s)	207, 208, 2131
NcoI	CCATGG	4 cut(s)	909, 1066, 1729, 1761
NlaIV	GGNNCC	6 cut(s)	121, 739, 740, 775, 1290, 2771
NmuCI	GTSAC	4 cut(s)	91, 2165, 2419, 2426
NruI	TCGCGA	1 cut(s)	216
NspI	RCATGY	1 cut(s)	1818
NspV	TTCGAA	1 cut(s)	552
OliI	CACNNNNGTG	2 cut(s)	110, 362
PaeI	GCATGC	1 cut(s)	1818
PagI	TCATGA	1 cut(s)	691
PasI	CCCWGGG	1 cut(s)	665
PceI	AGGCCT	1 cut(s)	1833
PciSI	GCTCTTC	2 cut(s)	412, 2660
PdmI	GAANNNNTTC	2 cut(s)	706, 2714
PfeI	GAWTC	7 cut(s)	76, 211, 419, 549, 997, 2122, 2489
PflMI	CCANNNNNTGG	2 cut(s)	809, 2804
PleI	GAGTC	8 cut(s)	133, 869, 1306, 1612, 1877, 1954, 1992, 2570
PpsI	GAGTC	8 cut(s)	133, 869, 1306, 1612, 1877, 1954, 1992, 2570
PshBI	ATTAAT	1 cut(s)	567
Psp6I	CCWGG	8 cut(s)	664, 776, 802, 928, 940, 1396, 1697, 2362
PspGI	CCWGG	8 cut(s)	664, 776, 802, 928, 940, 1396, 1697, 2362
PspN4I	GGNNCC	6 cut(s)	121, 739, 740, 775, 1290, 2771
PspOMI	GGGCCC	1 cut(s)	737
PspPI	GGNCC	6 cut(s)	22, 618, 737, 738, 2132, 2230
PstI	CTGCAG	2 cut(s)	2047, 2785
PstNI	CAGNNNCTG	2 cut(s)	2279, 2348
PsuI	RGATCY	4 cut(s)	595, 773, 1794, 2769
PvuII	CAGCTG	1 cut(s)	523
RruI	TCGCGA	1 cut(s)	216
RseI	CAYNNNNRTG	7 cut(s)	110, 152, 362, 693, 755, 1449, 2417
Rsr2I	CGGWCCG	1 cut(s)	22
RsrII	CGGWCCG	1 cut(s)	22
SacII	CCGCGG	2 cut(s)	28, 50
SalI	GTCGAC	1 cut(s)	227
SapI	GCTCTTC	2 cut(s)	412, 2660
Sau96I	GGNCC	6 cut(s)	22, 618, 737, 738, 2132, 2230
ScaI	AGTACT	1 cut(s)	854
SchI	GAGTC	8 cut(s)	134, 870, 1306, 1613, 1878, 1954, 1992, 2570
SduI	GDGCHC	7 cut(s)	122, 237, 250, 741, 1828, 1924, 2371
SexAI	ACCWGGT	1 cut(s)	2362
SfaNI	GCATC	4 cut(s)	1252, 1886, 2245, 2577
SfcI	CTRYAG	3 cut(s)	856, 2043, 2781
Sfr303I	CCGCGG	2 cut(s)	28, 50
SfuI	TTCGAA	1 cut(s)	552
SgrBI	CCGCGG	2 cut(s)	28, 50
SinI	GGWCC	3 cut(s)	22, 618, 2230
SmaI	CCCGGG	1 cut(s)	208
SmiMI	CAYNNNNRTG	7 cut(s)	110, 152, 362, 693, 755, 1449, 2417
SmlI	CTYRAG	4 cut(s)	935, 2370, 2390, 2921
SmoI	CTYRAG	4 cut(s)	935, 2370, 2390, 2921
SpeI	ACTAGT	1 cut(s)	1190
SphI	GCATGC	1 cut(s)	1818
SseBI	AGGCCT	1 cut(s)	1833
SspMI	CTAG	8 cut(s)	1191, 1232, 1316, 1829, 1835, 2270, 2306, 2339
StuI	AGGCCT	1 cut(s)	1833
TaiI	ACGT	2 cut(s)	234, 362
TaqI	TCGA	6 cut(s)	228, 552, 1947, 2253, 2492, 2943
TatI	WGTACW	4 cut(s)	445, 852, 921, 1888
TauI	GCSGC	3 cut(s)	49, 52, 2597
TfiI	GAWTC	7 cut(s)	76, 211, 419, 549, 997, 2122, 2489
TseFI	GTSAC	4 cut(s)	91, 2165, 2419, 2426
Tsp45I	GTSAC	4 cut(s)	91, 2165, 2419, 2426
TspGWI	ACGGA	3 cut(s)	110, 281, 1126
TspMI	CCCGGG	1 cut(s)	206
Van91I	CCANNNNNTGG	2 cut(s)	809, 2804
Vha464I	CTTAAG	1 cut(s)	935
VneI	GTGCAC	1 cut(s)	1920
VpaK11BI	GGWCC	3 cut(s)	22, 618, 2230
VspI	ATTAAT	1 cut(s)	567
XbaI	TCTAGA	1 cut(s)	1315
XceI	RCATGY	1 cut(s)	1818
XcmI	CCANNNNNNNNNTGG	1 cut(s)	112
XmaI	CCCGGG	1 cut(s)	206
XmiI	GTMKAC	4 cut(s)	228, 681, 1004, 1131
XmnI	GAANNNNTTC	2 cut(s)	706, 2714
XspI	CTAG	8 cut(s)	1191, 1232, 1316, 1829, 1835, 2270, 2306, 2339
ZrmI	AGTACT	1 cut(s)	854

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.