Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003249

Physical Location & Seq

Genomic Coordinates Reverse (-)

7267541 .. 7272354

Gene Structure 4814 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g12870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGCCGACCCCACCTCTCACGCATCTCCCATGGACGACGCGAAGAAGAGGAAGCGCAAGAGAAACAGAGCGAAGAAGCCGTCGGAATCGGAAGTTGCAGAGCAACCGGAGCCGCAAATTGAAGAAGAGGAAACTGGAGACGGCGAAGAACAAGCTAAGAAGAAGGGATTGGAGAAGAAGAAGAGGAAGAAGATGAAGAAATTGAAGGGAGAGGAGGAGGAAGCAGCAGAGGCCGAAGAAGAAGAAGAAGCAGAGGAGGAGGAGGAGAAGAAGGAAGAGAAGAAAGAGAAGAAGGTGAGGAGTGGTGGAGGGACTGGGATTATGAGCACAGTGAGCTTTGAGAGTTTGAATTTATCTGAGAAAACCTTCTCGGCCATTCAAGGATTGGGCTTTCAGCACATGACTCAGATTCAATCCAGAGCAATCCCGCCGCTGTTGATTGGAAAAGATGTGCTTGGAGCTGCAAGGACAGGTTCCGGGAAGACTCTGGCGTTTTTAGTGCCTGCTATTGAGTTGTTATATAACGCAGGCTTTTCGCCTCGCAATGGAACTGGTGTTGTTGTCATTTGCCCAACTAGGGAACTCGCAATACAGTCCCATGCTGTGGCTAAGGACCTTCTCAAGAATCACTCACAGACTCTTGGCTTGGTTATTGGTGGTTCCGCTAGAAGAGGAGAAGCAGAGCGTCTTGCAAAAGGAGTGAATTTATTGGTGGCAACTCCTGGTCGCCTTCTTGACCATCTGCAGAACACGAAGGGATTTGTATATAAGAACTTGAAGTGCCTTATCATTGATGAAGCTGACAGGATACTGGAAGCAAACTTTGAGGAAGAAATGAAGCAAATTATTAACATTCTGCCAAAGAATAGGCAAACAGCTTTATTTTCTGCAACCCAGACTAAGAAGGTTGAAGATCTTGCTCGCTTGTCCTTCCAGACGACGCCTATGTATATAGATGTTGATGATGGGAGAACTAAGGTCACAAATGAAGGGCTGCAACAAGGCTATTGTCTTGTGCCAAGTGCCAAGAGATTTATTCTGCTGTATTCTTTCCTCACAAAGAATCTATCAAAGAAAGTGATGGTCTTCTTCTCTTCTTGTAACTCAGTGAAATTCCACGCTGATCTTCTTAGATATGTTAATGTGGATTGCTTTGATATCCATGGAAAGCAAAAGCAGCAGAAGAGGACAACTACGTTTTTTGACTACTGCAAAGCAGAGAAAGGAATCTTACTTTGTACTGATGTTGCTGCTCGTGGCTTGGATATCCCTGCCGTGGACTGGATTGTGCAGTTTGATCCTCCAGATGAACCCAAGGAATATATTCACAGGGTTGGTCGAACAGCTCGTGGAGAAGGTGGAAAAGGAAATGCACTACTTTTCCTTATTCCTGAAGAGTTGAGATTTCTCAAGTATTTAAAGGATGCAAAAGTCCCTGTTAAAGAGTATGAATTTAATGAGAAGAAGTTAAAAAATGTGCAATCTCAGCTGGAGAAGTTGGTTGCCAACAACTACCATCTGAACCGTGCAGCAAAAGATGCATATAGGTCATATCTATTAGCATATAATTCACACTCTATGAAGGACATCTTTAATGTTCACCGACTTGATCTCCAGGCTGTTGCTTCTTCATTTTGCTTTTCAAATCCACCCAAGGTAAATTTAAACTTAGACAGCAGTGCATCAAAGTTTAGGAAGAACGTGCGCAAAGTGGATGGAAAGCGACATGGAATCAATCCTGGCAATCCTTACGGAAGGCAAAATGGTGGAGATGATACAAGACAATTTGTGAGACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

600

Amino Acids

67.32

Weight (kDa)

9.21

Isoelectric Point (pI)

44.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	135 - 306	4.5e-47	DEAD/DEAH box helicase
Helicase_C	PF00271	347 - 450	1.5e-23	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	504 - 553	3.5e-17	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18600
fragaria_vesca	FvH4_5g12870
malus_domestica	MD05G1177700.v1.1 MD06G1209500.v1.1 MD14G1220200.v1.1 MD15G1015500.v1.1
prunus_persica	Prupe.5G214700_v2.0.a1 Prupe.6G096100_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G097300_v2.0.a1
pyrus_communis	pycom05g16360 pycom05g16400 pycom05g16410 pycom06g18710 pycom14g18230 pycom15g01320
rosa_chinensis	RchiOBHm_Chr5g0083351 RchiOBHm_Chr5g0083361 RchiOBHm_Chr7g0184361
rosa_laevigata	RLG00000004982 RLG00000037030
rosa_multiflora	Rmu_sc0001444.1_g000013 Rmu_sc0001557.1_g000022 Rmu_sc0002245.1_g000045
rosa_roxburghii	Rroxscaffold_1G00001130 Rroxscaffold_3G00269690
rosa_samantha	Rh5AG533800 Rh5BG561600 Rh5CG583900 Rh5CG584000 Rh7AG080700 Rh7BG066500 Rh7CG066800 Rh7DG066500
rosa_wichuraiana	Rw5G049900 Rw7G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1706
AccB7I	CCANNNNNTGG	1 cut(s)	604
AccII	CGCG	1 cut(s)	41
AciI	CCGC	4 cut(s)	113, 428, 431, 663
AclWI	GGATC	1 cut(s)	1292
AcoI	YGGCCR	2 cut(s)	3, 372
AcsI	RAATTY	5 cut(s)	349, 703, 1112, 1451, 1660
AcuI	CTGAAG	1 cut(s)	1413
AcyI	GRCGYC	1 cut(s)	941
AfaI	GTAC	1 cut(s)	1240
AfiI	CCNNNNNNNGG	5 cut(s)	545, 577, 604, 1276, 1281
AgsI	TTSAA	8 cut(s)	122, 205, 349, 380, 413, 778, 911, 1644
AjnI	CCWGG	3 cut(s)	721, 1614, 1738
AjuI	GAANNNNNNNTTGG	2 cut(s)	152, 184
AluBI	AGCT	7 cut(s)	155, 336, 461, 800, 878, 1346, 1489
AluI	AGCT	7 cut(s)	155, 336, 461, 800, 878, 1346, 1489
Alw21I	GWGCWC	1 cut(s)	329
Alw26I	GTCTC	2 cut(s)	132, 1786
AlwI	GGATC	1 cut(s)	1292
AoxI	GGCC	3 cut(s)	3, 231, 372
ApeKI	GCWGC	6 cut(s)	224, 461, 994, 1177, 1250, 1529
ApoI	RAATTY	5 cut(s)	349, 703, 1112, 1451, 1660
ArsI	GACNNNNNNTTYG	2 cut(s)	65, 97
Asp700I	GAANNNNTTC	2 cut(s)	365, 1323
AspLEI	GCGC	2 cut(s)	57, 1707
AspS9I	GGNCC	1 cut(s)	613
AsuC2I	CCSGG	1 cut(s)	478
AsuHPI	GGTGA	2 cut(s)	307, 1592
AvaII	GGWCC	1 cut(s)	613
BauI	CACGAG	2 cut(s)	1254, 1347
BbsI	GAAGAC	2 cut(s)	488, 1078
Bbv12I	GWGCWC	1 cut(s)	329
BbvI	GCAGC	6 cut(s)	236, 448, 981, 1189, 1237, 1541
BccI	CCATC	5 cut(s)	747, 959, 1075, 1524, 1709
BceAI	ACGGC	3 cut(s)	64, 157, 1259
BcgI	CGANNNNNNTGC	2 cut(s)	516, 550
BciT130I	CCWGG	3 cut(s)	723, 1616, 1740
BciVI	GTATCC	1 cut(s)	801
BcnI	CCSGG	1 cut(s)	478
BcoDI	GTCTC	2 cut(s)	132, 1786
BfaI	CTAG	2 cut(s)	576, 666
BfmI	CTRYAG	1 cut(s)	743
BfuI	GTATCC	1 cut(s)	801
BglII	AGATCT	1 cut(s)	913
BisI	GCNGC	8 cut(s)	113, 225, 431, 462, 995, 1178, 1251, 1530
BlsI	GCNGC	8 cut(s)	114, 226, 432, 463, 996, 1179, 1252, 1531
Bme1390I	CCNGG	4 cut(s)	478, 723, 1616, 1740
Bme18I	GGWCC	1 cut(s)	613
BmgT120I	GGNCC	1 cut(s)	613
BmiI	GGNNCC	3 cut(s)	111, 475, 661
BmrFI	CCNGG	4 cut(s)	478, 723, 1616, 1740
BmrI	ACTGGG	1 cut(s)	324
BmsI	GCATC	4 cut(s)	32, 1414, 1528, 1691
BmuI	ACTGGG	1 cut(s)	324
BpiI	GAAGAC	2 cut(s)	488, 1078
BpmI	CTGGAG	4 cut(s)	156, 1287, 1511, 1598
Bpu10I	CCTNAGC	1 cut(s)	609
BpuEI	CTTGAG	2 cut(s)	605, 1394
BpuMI	CCSGG	1 cut(s)	478
BsaHI	GRCGYC	1 cut(s)	941
BsaJI	CCNNGG	5 cut(s)	30, 1162, 1275, 1314, 1653
BsaWI	WCCGGW	1 cut(s)	106
BsaXI	ACNNNNNCTCC	2 cut(s)	1596, 1626
Bsc4I	CCNNNNNNNGG	5 cut(s)	545, 577, 604, 1276, 1281
Bse1I	ACTGG	5 cut(s)	139, 319, 556, 816, 1286
Bse3DI	GCAATG	1 cut(s)	550
BseBI	CCWGG	3 cut(s)	723, 1616, 1740
BseDI	CCNNGG	5 cut(s)	30, 1162, 1275, 1314, 1653
BseGI	GGATG	2 cut(s)	1429, 1720
BseLI	CCNNNNNNNGG	5 cut(s)	545, 577, 604, 1276, 1281
BseMI	GCAATG	1 cut(s)	550
BseMII	CTCAG	4 cut(s)	348, 419, 1119, 1499
BseNI	ACTGG	5 cut(s)	139, 319, 556, 816, 1286
BseRI	GAGGAG	8 cut(s)	227, 230, 269, 272, 275, 278, 313, 687
BseXI	GCAGC	6 cut(s)	236, 448, 981, 1189, 1237, 1541
BsgI	GTGCAG	2 cut(s)	1310, 1548
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	3 cut(s)	5, 233, 374
BsiHKAI	GWGCWC	1 cut(s)	329
BsiSI	CCGG	2 cut(s)	107, 477
BslFI	GGGAC	3 cut(s)	325, 580, 1418
BslI	CCNNNNNNNGG	5 cut(s)	545, 577, 604, 1276, 1281
BsmAI	GTCTC	2 cut(s)	132, 1786
BsmBI	CGTCTC	1 cut(s)	132
BsmFI	GGGAC	3 cut(s)	325, 580, 1418
BsnI	GGCC	3 cut(s)	5, 233, 374
Bsp1286I	GDGCHC	1 cut(s)	329
Bsp143I	GATC	4 cut(s)	913, 1123, 1297, 1609
Bsp19I	CCATGG	2 cut(s)	30, 1162
BspACI	CCGC	4 cut(s)	113, 428, 431, 663
BspANI	GGCC	3 cut(s)	5, 233, 374
BspCNI	CTCAG	4 cut(s)	349, 418, 1118, 1498
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	3 cut(s)	111, 475, 661
BspMAI	CTGCAG	1 cut(s)	747
BspPI	GGATC	1 cut(s)	1292
BsrDI	GCAATG	1 cut(s)	550
BsrI	ACTGG	5 cut(s)	139, 319, 556, 816, 1286
BssECI	CCNNGG	5 cut(s)	30, 1162, 1275, 1314, 1653
BssMI	GATC	4 cut(s)	913, 1123, 1297, 1609
BssNI	GRCGYC	1 cut(s)	941
BssSI	CACGAG	2 cut(s)	1254, 1347
BssT1I	CCWWGG	4 cut(s)	30, 1162, 1314, 1653
Bst2BI	CACGAG	2 cut(s)	1254, 1347
Bst2UI	CCWGG	3 cut(s)	723, 1616, 1740
Bst4CI	ACNGT	3 cut(s)	331, 594, 1526
Bst6I	CTCTTC	8 cut(s)	41, 120, 176, 270, 664, 1099, 1178, 1389
BstACI	GRCGYC	1 cut(s)	941
BstAPI	GCANNNNNTGC	1 cut(s)	1538
BstC8I	GCNNGC	3 cut(s)	504, 529, 922
BstDSI	CCRYGG	3 cut(s)	30, 1162, 1275
BstF5I	GGATG	2 cut(s)	1429, 1720
BstFNI	CGCG	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	57, 1707
BstKTI	GATC	4 cut(s)	916, 1126, 1300, 1612
BstMAI	GTCTC	2 cut(s)	132, 1786
BstMBI	GATC	4 cut(s)	913, 1123, 1297, 1609
BstMWI	GCNNNNNNNGC	6 cut(s)	109, 230, 333, 1177, 1486, 1538
BstNI	CCWGG	3 cut(s)	723, 1616, 1740
BstSCI	CCNGG	4 cut(s)	476, 721, 1614, 1738
BstSFI	CTRYAG	1 cut(s)	743
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	6 cut(s)	236, 448, 981, 1189, 1237, 1541
BstV2I	GAAGAC	2 cut(s)	488, 1078
BstX2I	RGATCY	1 cut(s)	913
BstYI	RGATCY	1 cut(s)	913
BsuI	GTATCC	1 cut(s)	801
BsuRI	GGCC	3 cut(s)	5, 233, 374
BtgI	CCRYGG	3 cut(s)	30, 1162, 1275
BtsCI	GGATG	2 cut(s)	1429, 1720
BtsI	GCAGTG	1 cut(s)	1684
BtsIMutI	CAGTG	3 cut(s)	336, 1113, 1684
Cac8I	GCNNGC	3 cut(s)	504, 529, 922
CfoI	GCGC	2 cut(s)	57, 1707
Cfr13I	GGNCC	1 cut(s)	613
CseI	GACGC	3 cut(s)	47, 674, 949
Csp6I	GTAC	1 cut(s)	1239
CviAII	CATG	5 cut(s)	31, 400, 599, 1163, 1727
CviQI	GTAC	1 cut(s)	1239
DpnI	GATC	4 cut(s)	915, 1125, 1299, 1611
DpnII	GATC	4 cut(s)	913, 1123, 1297, 1609
DraI	TTTAAA	2 cut(s)	1419, 1665
EaeI	YGGCCR	2 cut(s)	3, 372
Eam1104I	CTCTTC	8 cut(s)	41, 120, 176, 270, 664, 1099, 1178, 1389
EarI	CTCTTC	8 cut(s)	41, 120, 176, 270, 664, 1099, 1178, 1389
Eco130I	CCWWGG	4 cut(s)	30, 1162, 1314, 1653
Eco32I	GATATC	2 cut(s)	1159, 1267
Eco47I	GGWCC	1 cut(s)	613
Eco57I	CTGAAG	1 cut(s)	1413
EcoO109I	RGGNCCY	1 cut(s)	613
EcoRII	CCWGG	3 cut(s)	721, 1614, 1738
EcoRV	GATATC	2 cut(s)	1159, 1267
EcoT14I	CCWWGG	4 cut(s)	30, 1162, 1314, 1653
EcoT22I	ATGCAT	1 cut(s)	1543
ErhI	CCWWGG	4 cut(s)	30, 1162, 1314, 1653
Esp3I	CGTCTC	1 cut(s)	132
FaeI	CATG	5 cut(s)	34, 403, 602, 1166, 1730
FalI	AAGNNNNNCTT	4 cut(s)	438, 470, 1574, 1606
FaqI	GGGAC	3 cut(s)	325, 580, 1418
FatI	CATG	5 cut(s)	30, 399, 598, 1162, 1726
FauI	CCCGC	1 cut(s)	435
Fnu4HI	GCNGC	8 cut(s)	113, 225, 431, 462, 995, 1178, 1251, 1530
FokI	GGATG	2 cut(s)	1436, 1727
Fsp4HI	GCNGC	8 cut(s)	113, 225, 431, 462, 995, 1178, 1251, 1530
FspBI	CTAG	2 cut(s)	576, 666
FspI	TGCGCA	1 cut(s)	1706
GlaI	GCGC	2 cut(s)	56, 1706
GluI	GCNGC	8 cut(s)	113, 225, 431, 462, 995, 1178, 1251, 1530
GsuI	CTGGAG	4 cut(s)	156, 1287, 1511, 1598
HaeIII	GGCC	3 cut(s)	5, 233, 374
HapII	CCGG	2 cut(s)	107, 477
HgaI	GACGC	3 cut(s)	47, 674, 949
HhaI	GCGC	2 cut(s)	57, 1707
Hin1I	GRCGYC	1 cut(s)	941
Hin1II	CATG	5 cut(s)	34, 403, 602, 1166, 1730
Hin6I	GCGC	2 cut(s)	55, 1705
HinP1I	GCGC	2 cut(s)	55, 1705
HinfI	GANTC	9 cut(s)	86, 403, 409, 484, 625, 637, 1063, 1227, 1731
HpaII	CCGG	2 cut(s)	107, 477
HphI	GGTGA	2 cut(s)	307, 1592
Hpy166II	GTNNAC	2 cut(s)	1279, 1600
Hpy188I	TCNGA	5 cut(s)	85, 91, 358, 408, 1521
Hpy188III	TCNNGA	6 cut(s)	417, 622, 734, 934, 1304, 1391
Hpy8I	GTNNAC	2 cut(s)	1279, 1600
Hpy99I	CGWCG	3 cut(s)	41, 85, 943
HpyCH4III	ACNGT	3 cut(s)	331, 594, 1526
HpyCH4IV	ACGT	2 cut(s)	1196, 1701
HpyF10VI	GCNNNNNNNGC	6 cut(s)	109, 230, 333, 1177, 1486, 1538
HpySE526I	ACGT	2 cut(s)	1196, 1701
Hsp92I	GRCGYC	1 cut(s)	941
Hsp92II	CATG	5 cut(s)	34, 403, 602, 1166, 1730
HspAI	GCGC	2 cut(s)	55, 1705
Kzo9I	GATC	4 cut(s)	913, 1123, 1297, 1609
LmnI	GCTCC	2 cut(s)	109, 458
Lsp1109I	GCAGC	6 cut(s)	236, 448, 981, 1189, 1237, 1541
LweI	GCATC	4 cut(s)	32, 1414, 1528, 1691
MaeI	CTAG	2 cut(s)	576, 666
MaeII	ACGT	2 cut(s)	1196, 1701
MaeIII	GTNAC	2 cut(s)	979, 1100
MalI	GATC	4 cut(s)	915, 1125, 1299, 1611
MboI	GATC	4 cut(s)	913, 1123, 1297, 1609
MflI	RGATCY	1 cut(s)	913
MhlI	GDGCHC	1 cut(s)	329
MlyI	GAGTC	3 cut(s)	397, 478, 631
MmeI	TCCRAC	1 cut(s)	63
Mph1103I	ATGCAT	1 cut(s)	1543
MroXI	GAANNNNTTC	2 cut(s)	365, 1323
MseI	TTAA	8 cut(s)	849, 1140, 1418, 1440, 1455, 1469, 1593, 1664
MspA1I	CMGCKG	2 cut(s)	433, 1489
MspI	CCGG	2 cut(s)	107, 477
MspR9I	CCNGG	4 cut(s)	478, 723, 1616, 1740
MvaI	CCWGG	3 cut(s)	723, 1616, 1740
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	6 cut(s)	109, 230, 333, 1177, 1486, 1538
NciI	CCSGG	1 cut(s)	478
NcoI	CCATGG	2 cut(s)	30, 1162
NdeII	GATC	4 cut(s)	913, 1123, 1297, 1609
NlaIII	CATG	5 cut(s)	34, 403, 602, 1166, 1730
NlaIV	GGNNCC	3 cut(s)	111, 475, 661
NmeAIII	GCCGAG	1 cut(s)	350
NmuCI	GTSAC	1 cut(s)	979
NsbI	TGCGCA	1 cut(s)	1706
NsiI	ATGCAT	1 cut(s)	1543
PcsI	WCGNNNNNNNCGW	1 cut(s)	1345
PdmI	GAANNNNTTC	2 cut(s)	365, 1323
PfeI	GAWTC	6 cut(s)	86, 409, 625, 1063, 1227, 1731
PflMI	CCANNNNNTGG	1 cut(s)	604
PfoI	TCCNGGA	1 cut(s)	476
PkrI	GCNGC	8 cut(s)	114, 226, 432, 463, 996, 1179, 1252, 1531
PleI	GAGTC	3 cut(s)	397, 478, 631
PpsI	GAGTC	3 cut(s)	397, 478, 631
PpuMI	RGGWCCY	1 cut(s)	613
Psp5II	RGGWCCY	1 cut(s)	613
Psp6I	CCWGG	3 cut(s)	721, 1614, 1738
PspGI	CCWGG	3 cut(s)	721, 1614, 1738
PspN4I	GGNNCC	3 cut(s)	111, 475, 661
PspPI	GGNCC	1 cut(s)	613
PspPPI	RGGWCCY	1 cut(s)	613
PsrI	GAACNNNNNNTAC	2 cut(s)	573, 605
PstI	CTGCAG	1 cut(s)	747
PsuI	RGATCY	1 cut(s)	913
PvuII	CAGCTG	1 cut(s)	1489
RsaI	GTAC	1 cut(s)	1240
RsaNI	GTAC	1 cut(s)	1239
SaqAI	TTAA	8 cut(s)	849, 1140, 1418, 1440, 1455, 1469, 1593, 1664
SatI	GCNGC	8 cut(s)	113, 225, 431, 462, 995, 1178, 1251, 1530
Sau3AI	GATC	4 cut(s)	913, 1123, 1297, 1609
Sau96I	GGNCC	1 cut(s)	613
SchI	GAGTC	3 cut(s)	397, 478, 631
ScrFI	CCNGG	4 cut(s)	478, 723, 1616, 1740
SduI	GDGCHC	1 cut(s)	329
SfaNI	GCATC	4 cut(s)	32, 1414, 1528, 1691
SfcI	CTRYAG	1 cut(s)	743
SinI	GGWCC	1 cut(s)	613
SmlI	CTYRAG	2 cut(s)	620, 1409
SmoI	CTYRAG	2 cut(s)	620, 1409
SsiI	CCGC	4 cut(s)	113, 428, 431, 663
SspMI	CTAG	2 cut(s)	576, 666
StyD4I	CCNGG	4 cut(s)	476, 721, 1614, 1738
StyI	CCWWGG	4 cut(s)	30, 1162, 1314, 1653
TaaI	ACNGT	3 cut(s)	331, 594, 1526
TaiI	ACGT	2 cut(s)	1199, 1704
TaqI	TCGA	1 cut(s)	1339
TatI	WGTACW	1 cut(s)	1238
TauI	GCSGC	2 cut(s)	115, 433
TfiI	GAWTC	6 cut(s)	86, 409, 625, 1063, 1227, 1731
Tru1I	TTAA	8 cut(s)	849, 1140, 1418, 1440, 1455, 1469, 1593, 1664
Tru9I	TTAA	8 cut(s)	849, 1140, 1418, 1440, 1455, 1469, 1593, 1664
TscAI	CASTG	3 cut(s)	336, 1113, 1684
TseFI	GTSAC	1 cut(s)	979
TseI	GCWGC	6 cut(s)	224, 461, 994, 1177, 1250, 1529
Tsp45I	GTSAC	1 cut(s)	979
TspDTI	ATGAA	8 cut(s)	209, 810, 851, 1002, 1323, 1464, 1595, 1620
TspGWI	ACGGA	1 cut(s)	1767
TspRI	CASTG	3 cut(s)	336, 1113, 1684
Van91I	CCANNNNNTGG	1 cut(s)	604
VpaK11BI	GGWCC	1 cut(s)	613
XapI	RAATTY	5 cut(s)	349, 703, 1112, 1451, 1660
XcmI	CCANNNNNNNNNTGG	1 cut(s)	382
XmnI	GAANNNNTTC	2 cut(s)	365, 1323
XspI	CTAG	2 cut(s)	576, 666
Zsp2I	ATGCAT	1 cut(s)	1543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.