Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0003249

Physical Location & Seq

Genomic Coordinates Reverse (-)

62478920 .. 62483053

Gene Structure 4134 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00269690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGACCGACCCAATCTCCCACGCATCTCCCATGGACGACGCGAAGAAGAGGAAGCGCAAGAGAAACAGAGCGAAGAAGCCATCGGAATCGGAAGCTGCAGAGCAACCGGAGCCCCAAATTGAAGAAGCGGAACACGGAGAAGGCGAAGAGAAAGCTAAGAAGAAGGAGAAGAAGAGGAAGAAGCCGAAGAAATTGAAGGGAGAGGAGGAAGCAGCAGAGGCTGAAATCCCTAGCGAGACCAAAGAAGAAGAAGAAGATGAAGAGGCAGAAGAGGAAGAAGAGAAGAAAGAGAAGGAAGAGAAGAAAGAGAAGAAGGTGAGGAGTGGTGGAGGGACTGGGATTATGAGCACAGTGACCTTTGCTTCATTGAATTTATCGGAGAAAACTTTCTCGGCCATTCAAGAATTGGGCTTTCAGCATATGACCCAGATTCAATCCAGAGCAATCCCACCGCTTTTGATCGGAAGAGATGTCCTTGGAGCTGCAAGGACAGGGTCCGGGAAAACTCTTGCTTTTCTGGTGCCAGCTGTGGAGTTGTTATATAACGCAAGCTTTTCCCCTCGTAATGGAACTGGTGTTGTTGTCATTTGCCCAACTAGGGAACTCGCAATACAGTCCCATGCCGTGGCCAAGGACCTTCTCAAGAATCACTCGCAGACTCTTGGTTTGGTTATTGGTGGTTCGGCTAGAAGAGGAGAAGCAGAGCGTCTTGCTAAAGGAGTAAACCTATTGGTTGCAACTCCTGGTCGCCTTCTTGACCATCTGCAGAACACCAAGGGATTCGTATATAAGAACTTGAAGTGCCTCATCATTGATGAAGCTGACAGGATACTGGAAGCAAACTTTGAGGAAGAAATGAAACAAATCATTAACATTCTACCAAAGGTTGAAGATCTTGCTCGCTTGTCCTTCCAGACAACGCCTATGTATATAGATGTGGATGATGGGAGAACTAAGGTCACGAATGAAGGGCTGCAACAAGGCTATTGTCTTGTGCCAAGTGCCAAGAGATTTATTCTCCTATATTCTTTCCTGACGAAGAATCTATCAAAGAAAGTGATGGTCTTCTTCTCTTCTTGTAACTCAGTGAAATTCCACTCCGACCTTCTTAGATACATTAATGTGGATTGCTTTGATATCCATGGAAAGCAAAAGCAGCAGAAGAGGACAAGTACTTTTTTTGACTACTGCAAAGCAGAGAAAGGAATCTTACTTTGTACTGATGTTGCTGCTCGTGGCTTGGATATCCCCGCCGTGGACTGGATTGTGCAGTTTGATCCTCCAGATGAACCCAAGGAATATATCCACAGGGTTGGTCGAACAGCTCGTGGGGAAGGTGGAAAAGGAAATGCACTACTTTTCCTCATTCCTGAAGAGTTGCAGTTTCTTCGCTATTTGAGGGAAGCAAAAGTCCCTGTTAAAGAGTATGAATTTAATGAGAAGAAGCTAAAAAATGTGCAATCTCAGCTGGAGAAGTTGGTTGCCAACAACTACCATCTGAACCGTGCAGCAAAAGATGCATATAGGTCTTATCTATTAGCATATAATTCACACTCTATGAAGGACATCTTTAATGTTCACCGACTTGATCTCCAGGCAGTTGCTTCTTCATTTTGCTTTTCTAATCCACCGAAGGTAAATTTAAACTTAGACAGCAGTGCATCAAAGTTCCGGAAGAACATGCGCAAAGTGGATGGAGTTCGACATGGAATCAATCCTAACAATCCTTATGGAAGGCAAAGAGGTGGAGATGATGACATGAGACAATTTGTGAGACATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

593

Amino Acids

66.95

Weight (kDa)

8.95

Isoelectric Point (pI)

43.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	142 - 294	2.3e-40	DEAD/DEAH box helicase
Helicase_C	PF00271	340 - 443	1.6e-23	Helicase conserved C-terminal domain
CTE_SPB4	PF13959	497 - 546	3.4e-17	ATP-dependent rRNA helicase SPB4-like, C-terminal extension

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18600
fragaria_vesca	FvH4_5g12870
malus_domestica	MD05G1177700.v1.1 MD06G1209500.v1.1 MD14G1220200.v1.1 MD15G1015500.v1.1
prunus_persica	Prupe.5G214700_v2.0.a1 Prupe.6G096100_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G097300_v2.0.a1
pyrus_communis	pycom05g16360 pycom05g16400 pycom05g16410 pycom06g18710 pycom14g18230 pycom15g01320
rosa_chinensis	RchiOBHm_Chr5g0083351 RchiOBHm_Chr5g0083361 RchiOBHm_Chr7g0184361
rosa_laevigata	RLG00000004982 RLG00000037030
rosa_multiflora	Rmu_sc0001444.1_g000013 Rmu_sc0001557.1_g000022 Rmu_sc0002245.1_g000045
rosa_roxburghii	Rroxscaffold_1G00001130 Rroxscaffold_3G00269690
rosa_samantha	Rh5AG533800 Rh5BG561600 Rh5CG583900 Rh5CG584000 Rh7AG080700 Rh7BG066500 Rh7CG066800 Rh7DG066500
rosa_wichuraiana	Rw5G049900 Rw7G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1685
AccB1I	GGYRCC	1 cut(s)	520
AccB7I	CCANNNNNTGG	1 cut(s)	625
AccII	CGCG	1 cut(s)	41
AccIII	TCCGGA	1 cut(s)	1671
AciI	CCGC	3 cut(s)	128, 452, 1251
AclWI	GGATC	1 cut(s)	1271
AcoI	YGGCCR	2 cut(s)	393, 627
AcsI	RAATTY	4 cut(s)	370, 1091, 1430, 1639
AcuI	CTGAAG	1 cut(s)	1392
AfaI	GTAC	2 cut(s)	1174, 1219
AfiI	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1255, 1260
AgsI	TTSAA	7 cut(s)	122, 196, 370, 401, 434, 799, 890
AjnI	CCWGG	2 cut(s)	742, 1593
AluBI	AGCT	9 cut(s)	95, 155, 482, 527, 552, 821, 1325, 1447, 1468
AluI	AGCT	9 cut(s)	95, 155, 482, 527, 552, 821, 1325, 1447, 1468
Alw21I	GWGCWC	1 cut(s)	350
Alw26I	GTCTC	3 cut(s)	230, 1756, 1768
AlwI	GGATC	1 cut(s)	1271
AlwNI	CAGNNNCTG	1 cut(s)	221
Aor13HI	TCCGGA	1 cut(s)	1671
AoxI	GGCC	2 cut(s)	393, 627
ApeKI	GCWGC	7 cut(s)	95, 212, 482, 973, 1156, 1229, 1508
ApoI	RAATTY	4 cut(s)	370, 1091, 1430, 1639
ArsI	GACNNNNNNTTYG	2 cut(s)	649, 681
AseI	ATTAAT	1 cut(s)	1119
Asp700I	GAANNNNTTC	1 cut(s)	386
AspLEI	GCGC	2 cut(s)	57, 1686
AspS9I	GGNCC	2 cut(s)	495, 634
AsuC2I	CCSGG	1 cut(s)	499
AsuHPI	GGTGA	2 cut(s)	328, 1571
AvaII	GGWCC	2 cut(s)	495, 634
BalI	TGGCCA	1 cut(s)	629
BanI	GGYRCC	1 cut(s)	520
BanII	GRGCYC	1 cut(s)	114
BauI	CACGAG	2 cut(s)	1233, 1326
BbsI	GAAGAC	1 cut(s)	1057
Bbv12I	GWGCWC	1 cut(s)	350
BbvI	GCAGC	7 cut(s)	82, 224, 469, 960, 1168, 1216, 1520
BccI	CCATC	6 cut(s)	88, 768, 938, 1054, 1503, 1688
BceAI	ACGGC	2 cut(s)	608, 1238
BcgI	CGANNNNNNTGC	2 cut(s)	1370, 1404
BciT130I	CCWGG	2 cut(s)	744, 1595
BciVI	GTATCC	1 cut(s)	822
BcnI	CCSGG	1 cut(s)	499
BcoDI	GTCTC	3 cut(s)	230, 1756, 1768
BfaI	CTAG	3 cut(s)	231, 597, 687
BfmI	CTRYAG	2 cut(s)	96, 764
BfuI	GTATCC	1 cut(s)	822
BglII	AGATCT	1 cut(s)	892
BisI	GCNGC	7 cut(s)	96, 213, 483, 974, 1157, 1230, 1509
BlsI	GCNGC	7 cut(s)	97, 214, 484, 975, 1158, 1231, 1510
BmcAI	AGTACT	1 cut(s)	1174
Bme1390I	CCNGG	3 cut(s)	499, 744, 1595
Bme18I	GGWCC	2 cut(s)	495, 634
BmgT120I	GGNCC	2 cut(s)	495, 634
BmiI	GGNNCC	3 cut(s)	111, 496, 522
BmrFI	CCNGG	3 cut(s)	499, 744, 1595
BmrI	ACTGGG	1 cut(s)	345
BmsI	GCATC	3 cut(s)	32, 1507, 1670
BmuI	ACTGGG	1 cut(s)	345
BpiI	GAAGAC	1 cut(s)	1057
BpmI	CTGGAG	3 cut(s)	1266, 1490, 1577
BpuEI	CTTGAG	1 cut(s)	626
BpuMI	CCSGG	1 cut(s)	499
BsaI	GGTCTC	1 cut(s)	230
BsaJI	CCNNGG	8 cut(s)	30, 475, 624, 630, 774, 1141, 1254, 1293
BsaWI	WCCGGW	2 cut(s)	106, 1671
BsaXI	ACNNNNNCTCC	3 cut(s)	29, 1575, 1605
Bsc4I	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1255, 1260
Bse1I	ACTGG	4 cut(s)	340, 577, 837, 1265
BseAI	TCCGGA	1 cut(s)	1671
BseBI	CCWGG	2 cut(s)	744, 1595
BseDI	CCNNGG	8 cut(s)	30, 475, 624, 630, 774, 1141, 1254, 1293
BseGI	GGATG	2 cut(s)	946, 1699
BseLI	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1255, 1260
BseMII	CTCAG	2 cut(s)	1098, 1478
BseNI	ACTGG	4 cut(s)	340, 577, 837, 1265
BseRI	GAGGAG	3 cut(s)	218, 334, 708
BseXI	GCAGC	7 cut(s)	82, 224, 469, 960, 1168, 1216, 1520
BsgI	GTGCAG	2 cut(s)	1289, 1527
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	2 cut(s)	395, 629
BshNI	GGYRCC	1 cut(s)	520
BsiHKAI	GWGCWC	1 cut(s)	350
BsiSI	CCGG	3 cut(s)	107, 498, 1672
BslFI	GGGAC	3 cut(s)	346, 601, 1397
BslI	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1255, 1260
BsmAI	GTCTC	3 cut(s)	230, 1756, 1768
BsmFI	GGGAC	3 cut(s)	346, 601, 1397
BsnI	GGCC	2 cut(s)	395, 629
Bso31I	GGTCTC	1 cut(s)	230
Bsp1286I	GDGCHC	2 cut(s)	114, 350
Bsp13I	TCCGGA	1 cut(s)	1671
Bsp143I	GATC	4 cut(s)	459, 892, 1276, 1588
Bsp19I	CCATGG	2 cut(s)	30, 1141
BspACI	CCGC	3 cut(s)	128, 452, 1251
BspANI	GGCC	2 cut(s)	395, 629
BspCNI	CTCAG	2 cut(s)	1097, 1477
BspEI	TCCGGA	1 cut(s)	1671
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	3 cut(s)	111, 496, 522
BspMAI	CTGCAG	2 cut(s)	100, 768
BspPI	GGATC	1 cut(s)	1271
BspT107I	GGYRCC	1 cut(s)	520
BspTNI	GGTCTC	1 cut(s)	230
BsrI	ACTGG	4 cut(s)	340, 577, 837, 1265
BssECI	CCNNGG	8 cut(s)	30, 475, 624, 630, 774, 1141, 1254, 1293
BssMI	GATC	4 cut(s)	459, 892, 1276, 1588
BssSI	CACGAG	2 cut(s)	1233, 1326
BssT1I	CCWWGG	6 cut(s)	30, 475, 630, 774, 1141, 1293
Bst2BI	CACGAG	2 cut(s)	1233, 1326
Bst2UI	CCWGG	2 cut(s)	744, 1595
Bst4CI	ACNGT	3 cut(s)	352, 615, 1505
BstAPI	GCANNNNNTGC	1 cut(s)	1517
BstC8I	GCNNGC	3 cut(s)	525, 550, 901
BstDEI	CTNAG	6 cut(s)	156, 954, 1084, 1109, 1464, 1648
BstDSI	CCRYGG	4 cut(s)	30, 624, 1141, 1254
BstF5I	GGATG	2 cut(s)	946, 1699
BstFNI	CGCG	1 cut(s)	41
BstHHI	GCGC	2 cut(s)	57, 1686
BstKTI	GATC	4 cut(s)	462, 895, 1279, 1591
BstMAI	GTCTC	3 cut(s)	230, 1756, 1768
BstMBI	GATC	4 cut(s)	459, 892, 1276, 1588
BstMWI	GCNNNNNNNGC	5 cut(s)	109, 218, 1156, 1465, 1517
BstNI	CCWGG	2 cut(s)	744, 1595
BstNSI	RCATGY	1 cut(s)	1684
BstSCI	CCNGG	3 cut(s)	497, 742, 1593
BstSFI	CTRYAG	2 cut(s)	96, 764
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	7 cut(s)	82, 224, 469, 960, 1168, 1216, 1520
BstV2I	GAAGAC	1 cut(s)	1057
BstX2I	RGATCY	1 cut(s)	892
BstXI	CCANNNNNNTGG	1 cut(s)	1313
BstYI	RGATCY	1 cut(s)	892
BsuI	GTATCC	1 cut(s)	822
BsuRI	GGCC	2 cut(s)	395, 629
BtgI	CCRYGG	4 cut(s)	30, 624, 1141, 1254
BtsCI	GGATG	2 cut(s)	946, 1699
BtsI	GCAGTG	1 cut(s)	1663
BtsIMutI	CAGTG	3 cut(s)	357, 1092, 1663
Cac8I	GCNNGC	3 cut(s)	525, 550, 901
CaiI	CAGNNNCTG	1 cut(s)	221
CfoI	GCGC	2 cut(s)	57, 1686
Cfr13I	GGNCC	2 cut(s)	495, 634
CseI	GACGC	2 cut(s)	47, 695
Csp6I	GTAC	2 cut(s)	1173, 1218
CspCI	CAANNNNNGTGG	2 cut(s)	438, 473
CviAII	CATG	6 cut(s)	31, 620, 1142, 1681, 1706, 1759
CviQI	GTAC	2 cut(s)	1173, 1218
DdeI	CTNAG	6 cut(s)	156, 954, 1084, 1109, 1464, 1648
DpnI	GATC	4 cut(s)	461, 894, 1278, 1590
DpnII	GATC	4 cut(s)	459, 892, 1276, 1588
DraI	TTTAAA	1 cut(s)	1644
EaeI	YGGCCR	2 cut(s)	393, 627
Eco130I	CCWWGG	6 cut(s)	30, 475, 630, 774, 1141, 1293
Eco24I	GRGCYC	1 cut(s)	114
Eco31I	GGTCTC	1 cut(s)	230
Eco32I	GATATC	2 cut(s)	1138, 1246
Eco47I	GGWCC	2 cut(s)	495, 634
Eco57I	CTGAAG	1 cut(s)	1392
EcoO109I	RGGNCCY	1 cut(s)	634
EcoRII	CCWGG	2 cut(s)	742, 1593
EcoRV	GATATC	2 cut(s)	1138, 1246
EcoT14I	CCWWGG	6 cut(s)	30, 475, 630, 774, 1141, 1293
EcoT22I	ATGCAT	1 cut(s)	1522
EcoT38I	GRGCYC	1 cut(s)	114
ErhI	CCWWGG	6 cut(s)	30, 475, 630, 774, 1141, 1293
FaeI	CATG	6 cut(s)	34, 623, 1145, 1684, 1709, 1762
FalI	AAGNNNNNCTT	2 cut(s)	1553, 1585
FaqI	GGGAC	3 cut(s)	346, 601, 1397
FatI	CATG	6 cut(s)	30, 619, 1141, 1680, 1705, 1758
FauI	CCCGC	1 cut(s)	1258
FauNDI	CATATG	1 cut(s)	420
Fnu4HI	GCNGC	7 cut(s)	96, 213, 483, 974, 1157, 1230, 1509
FokI	GGATG	2 cut(s)	953, 1706
FriOI	GRGCYC	1 cut(s)	114
Fsp4HI	GCNGC	7 cut(s)	96, 213, 483, 974, 1157, 1230, 1509
FspBI	CTAG	3 cut(s)	231, 597, 687
FspI	TGCGCA	1 cut(s)	1685
GlaI	GCGC	2 cut(s)	56, 1685
GluI	GCNGC	7 cut(s)	96, 213, 483, 974, 1157, 1230, 1509
GsuI	CTGGAG	3 cut(s)	1266, 1490, 1577
HaeIII	GGCC	2 cut(s)	395, 629
HapII	CCGG	3 cut(s)	107, 498, 1672
HgaI	GACGC	2 cut(s)	47, 695
HhaI	GCGC	2 cut(s)	57, 1686
Hin1II	CATG	6 cut(s)	34, 623, 1145, 1684, 1709, 1762
Hin6I	GCGC	2 cut(s)	55, 1684
HinP1I	GCGC	2 cut(s)	55, 1684
HindIII	AAGCTT	1 cut(s)	550
HinfI	GANTC	8 cut(s)	86, 430, 646, 658, 780, 1042, 1206, 1710
HpaII	CCGG	3 cut(s)	107, 498, 1672
HphI	GGTGA	2 cut(s)	328, 1571
Hpy166II	GTNNAC	3 cut(s)	724, 1258, 1579
Hpy188I	TCNGA	6 cut(s)	85, 91, 379, 464, 1102, 1500
Hpy8I	GTNNAC	3 cut(s)	724, 1258, 1579
Hpy99I	CGWCG	1 cut(s)	41
HpyCH4III	ACNGT	3 cut(s)	352, 615, 1505
HpyF10VI	GCNNNNNNNGC	5 cut(s)	109, 218, 1156, 1465, 1517
HpyF3I	CTNAG	6 cut(s)	156, 954, 1084, 1109, 1464, 1648
Hsp92II	CATG	6 cut(s)	34, 623, 1145, 1684, 1709, 1762
HspAI	GCGC	2 cut(s)	55, 1684
Kpn2I	TCCGGA	1 cut(s)	1671
Kzo9I	GATC	4 cut(s)	459, 892, 1276, 1588
LmnI	GCTCC	2 cut(s)	109, 479
Lsp1109I	GCAGC	7 cut(s)	82, 224, 469, 960, 1168, 1216, 1520
LweI	GCATC	3 cut(s)	32, 1507, 1670
MaeI	CTAG	3 cut(s)	231, 597, 687
MaeIII	GTNAC	3 cut(s)	352, 958, 1079
MalI	GATC	4 cut(s)	461, 894, 1278, 1590
MboI	GATC	4 cut(s)	459, 892, 1276, 1588
MflI	RGATCY	1 cut(s)	892
MhlI	GDGCHC	2 cut(s)	114, 350
MlsI	TGGCCA	1 cut(s)	629
MluCI	AATT	9 cut(s)	117, 191, 370, 404, 1091, 1430, 1546, 1639, 1766
MluNI	TGGCCA	1 cut(s)	629
MlyI	GAGTC	1 cut(s)	652
MmeI	TCCRAC	1 cut(s)	1125
Mox20I	TGGCCA	1 cut(s)	629
Mph1103I	ATGCAT	1 cut(s)	1522
MroI	TCCGGA	1 cut(s)	1671
MroXI	GAANNNNTTC	1 cut(s)	386
MscI	TGGCCA	1 cut(s)	629
MseI	TTAA	6 cut(s)	870, 1119, 1419, 1434, 1572, 1643
MslI	CAYNNNNRTG	1 cut(s)	1121
Msp20I	TGGCCA	1 cut(s)	629
MspA1I	CMGCKG	2 cut(s)	527, 1468
MspI	CCGG	3 cut(s)	107, 498, 1672
MspR9I	CCNGG	3 cut(s)	499, 744, 1595
MvaI	CCWGG	2 cut(s)	744, 1595
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	5 cut(s)	109, 218, 1156, 1465, 1517
NciI	CCSGG	1 cut(s)	499
NcoI	CCATGG	2 cut(s)	30, 1141
NdeI	CATATG	1 cut(s)	420
NdeII	GATC	4 cut(s)	459, 892, 1276, 1588
NlaIII	CATG	6 cut(s)	34, 623, 1145, 1684, 1709, 1762
NlaIV	GGNNCC	3 cut(s)	111, 496, 522
NmeAIII	GCCGAG	1 cut(s)	371
NmuCI	GTSAC	2 cut(s)	352, 958
NsbI	TGCGCA	1 cut(s)	1685
NsiI	ATGCAT	1 cut(s)	1522
NspI	RCATGY	1 cut(s)	1684
PcsI	WCGNNNNNNNCGW	2 cut(s)	141, 1324
PdmI	GAANNNNTTC	1 cut(s)	386
PfeI	GAWTC	7 cut(s)	86, 430, 646, 780, 1042, 1206, 1710
PflFI	GACNNNGTC	1 cut(s)	493
PflMI	CCANNNNNTGG	1 cut(s)	625
PfoI	TCCNGGA	1 cut(s)	497
PkrI	GCNGC	7 cut(s)	97, 214, 484, 975, 1158, 1231, 1510
PleI	GAGTC	1 cut(s)	652
PpsI	GAGTC	1 cut(s)	652
PpuMI	RGGWCCY	1 cut(s)	634
PshBI	ATTAAT	1 cut(s)	1119
Psp5II	RGGWCCY	1 cut(s)	634
Psp6I	CCWGG	2 cut(s)	742, 1593
PspGI	CCWGG	2 cut(s)	742, 1593
PspN4I	GGNNCC	3 cut(s)	111, 496, 522
PspPI	GGNCC	2 cut(s)	495, 634
PspPPI	RGGWCCY	1 cut(s)	634
PsrI	GAACNNNNNNTAC	2 cut(s)	594, 626
PstI	CTGCAG	2 cut(s)	100, 768
PstNI	CAGNNNCTG	1 cut(s)	221
PsuI	RGATCY	1 cut(s)	892
PsyI	GACNNNGTC	1 cut(s)	493
PvuII	CAGCTG	2 cut(s)	527, 1468
RsaI	GTAC	2 cut(s)	1174, 1219
RsaNI	GTAC	2 cut(s)	1173, 1218
RseI	CAYNNNNRTG	1 cut(s)	1121
SaqAI	TTAA	6 cut(s)	870, 1119, 1419, 1434, 1572, 1643
SatI	GCNGC	7 cut(s)	96, 213, 483, 974, 1157, 1230, 1509
Sau3AI	GATC	4 cut(s)	459, 892, 1276, 1588
Sau96I	GGNCC	2 cut(s)	495, 634
ScaI	AGTACT	1 cut(s)	1174
SchI	GAGTC	1 cut(s)	652
ScrFI	CCNGG	3 cut(s)	499, 744, 1595
SduI	GDGCHC	2 cut(s)	114, 350
SfaNI	GCATC	3 cut(s)	32, 1507, 1670
SfcI	CTRYAG	2 cut(s)	96, 764
SinI	GGWCC	2 cut(s)	495, 634
SmiMI	CAYNNNNRTG	1 cut(s)	1121
SmlI	CTYRAG	1 cut(s)	641
SmoI	CTYRAG	1 cut(s)	641
Sse9I	AATT	9 cut(s)	117, 191, 370, 404, 1091, 1430, 1546, 1639, 1766
SsiI	CCGC	3 cut(s)	128, 452, 1251
SspMI	CTAG	3 cut(s)	231, 597, 687
StyD4I	CCNGG	3 cut(s)	497, 742, 1593
StyI	CCWWGG	6 cut(s)	30, 475, 630, 774, 1141, 1293
TaaI	ACNGT	3 cut(s)	352, 615, 1505
TaqI	TCGA	2 cut(s)	1318, 1702
TaqII	GACCGA	1 cut(s)	20
TasI	AATT	9 cut(s)	117, 191, 370, 404, 1091, 1430, 1546, 1639, 1766
TatI	WGTACW	2 cut(s)	1172, 1217
TfiI	GAWTC	7 cut(s)	86, 430, 646, 780, 1042, 1206, 1710
Tru1I	TTAA	6 cut(s)	870, 1119, 1419, 1434, 1572, 1643
Tru9I	TTAA	6 cut(s)	870, 1119, 1419, 1434, 1572, 1643
TscAI	CASTG	3 cut(s)	357, 1092, 1663
TseFI	GTSAC	2 cut(s)	352, 958
TseI	GCWGC	7 cut(s)	95, 212, 482, 973, 1156, 1229, 1508
Tsp45I	GTSAC	2 cut(s)	352, 958
TspDTI	ATGAA	9 cut(s)	273, 354, 831, 872, 981, 1302, 1443, 1574, 1599
TspGWI	ACGGA	1 cut(s)	150
TspRI	CASTG	3 cut(s)	357, 1092, 1663
Tth111I	GACNNNGTC	1 cut(s)	493
Van91I	CCANNNNNTGG	1 cut(s)	625
VpaK11BI	GGWCC	2 cut(s)	495, 634
VspI	ATTAAT	1 cut(s)	1119
XapI	RAATTY	4 cut(s)	370, 1091, 1430, 1639
XceI	RCATGY	1 cut(s)	1684
XcmI	CCANNNNNNNNNTGG	1 cut(s)	403
XmnI	GAANNNNTTC	1 cut(s)	386
XspI	CTAG	3 cut(s)	231, 597, 687
ZrmI	AGTACT	1 cut(s)	1174
Zsp2I	ATGCAT	1 cut(s)	1522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.