DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G18600 |
| fragaria_vesca | FvH4_5g12870 |
| malus_domestica | MD05G1177700.v1.1 MD06G1209500.v1.1 MD14G1220200.v1.1 MD15G1015500.v1.1 |
| prunus_persica | Prupe.5G214700_v2.0.a1 Prupe.6G096100_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G097300_v2.0.a1 |
| pyrus_communis | pycom05g16360 pycom05g16400 pycom05g16410 pycom06g18710 pycom14g18230 pycom15g01320 |
| rosa_chinensis | RchiOBHm_Chr5g0083351 RchiOBHm_Chr5g0083361 RchiOBHm_Chr7g0184361 |
| rosa_laevigata | RLG00000004982 RLG00000037030 |
| rosa_multiflora | Rmu_sc0001444.1_g000013 Rmu_sc0001557.1_g000022 Rmu_sc0002245.1_g000045 |
| rosa_roxburghii | Rroxscaffold_1G00001130 Rroxscaffold_3G00269690 |
| rosa_samantha | Rh5AG533800 Rh5BG561600 Rh5CG583900 Rh5CG584000 Rh7AG080700 Rh7BG066500 Rh7CG066800 Rh7DG066500 |
| rosa_wichuraiana | Rw5G049900 Rw7G005460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1508 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 583 |
| AccBSI | CCGCTC | 1 cut(s) | 412 |
| AccI | GTMKAC | 3 cut(s) | 706, 1529, 1741 |
| AccIII | TCCGGA | 2 cut(s) | 28, 1288 |
| AciI | CCGC | 3 cut(s) | 410, 1588, 1604 |
| AclWI | GGATC | 2 cut(s) | 460, 1277 |
| AcsI | RAATTY | 4 cut(s) | 328, 682, 1097, 1645 |
| AcuI | CTGAAG | 2 cut(s) | 707, 1398 |
| AfaI | GTAC | 1 cut(s) | 1225 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 127, 219, 524, 556, 583, 625, 975 |
| AgsI | TTSAA | 9 cut(s) | 328, 349, 359, 392, 757, 890, 1405, 1490, 1651 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 428 |
| AjnI | CCWGG | 3 cut(s) | 618, 644, 700 |
| Alw21I | GWGCWC | 1 cut(s) | 308 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AlwI | GGATC | 2 cut(s) | 460, 1277 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 455, 619 |
| Ama87I | CYCGRG | 1 cut(s) | 1332 |
| Aor13HI | TCCGGA | 2 cut(s) | 28, 1288 |
| AoxI | GGCC | 1 cut(s) | 351 |
| ApeKI | GCWGC | 9 cut(s) | 440, 493, 979, 982, 1162, 1235, 1409, 1450, 1610 |
| ApoI | RAATTY | 4 cut(s) | 328, 682, 1097, 1645 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 344 |
| AspLEI | GCGC | 2 cut(s) | 57, 1509 |
| AspS9I | GGNCC | 1 cut(s) | 592 |
| AsuHPI | GGTGA | 5 cut(s) | 286, 958, 1577, 1654, 1766 |
| AsuII | TTCGAA | 1 cut(s) | 230 |
| AvaI | CYCGRG | 1 cut(s) | 1332 |
| AvaII | GGWCC | 1 cut(s) | 592 |
| BauI | CACGAG | 1 cut(s) | 1239 |
| BbsI | GAAGAC | 2 cut(s) | 215, 1063 |
| Bbv12I | GWGCWC | 1 cut(s) | 308 |
| BbvI | GCAGC | 9 cut(s) | 427, 480, 966, 994, 1174, 1222, 1396, 1462, 1622 |
| BccI | CCATC | 3 cut(s) | 278, 726, 1060 |
| BceAI | ACGGC | 1 cut(s) | 566 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1217, 1251 |
| BciT130I | CCWGG | 3 cut(s) | 620, 646, 702 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfaI | CTAG | 2 cut(s) | 261, 1005 |
| BfmI | CTRYAG | 2 cut(s) | 980, 1598 |
| BglII | AGATCT | 1 cut(s) | 892 |
| BisI | GCNGC | 9 cut(s) | 441, 494, 980, 983, 1163, 1236, 1410, 1451, 1611 |
| BlsI | GCNGC | 9 cut(s) | 442, 495, 981, 984, 1164, 1237, 1411, 1452, 1612 |
| Bme1390I | CCNGG | 3 cut(s) | 620, 646, 702 |
| Bme18I | GGWCC | 1 cut(s) | 592 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 428 |
| BmeT110I | CYCGRG | 1 cut(s) | 1332 |
| BmgT120I | GGNCC | 1 cut(s) | 592 |
| BmrFI | CCNGG | 3 cut(s) | 620, 646, 702 |
| BmsI | GCATC | 3 cut(s) | 32, 1676, 1677 |
| BpiI | GAAGAC | 2 cut(s) | 215, 1063 |
| BpmI | CTGGAG | 1 cut(s) | 1496 |
| Bpu10I | CCTNAGC | 1 cut(s) | 192 |
| Bpu14I | TTCGAA | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 9 cut(s) | 433, 582, 618, 619, 700, 732, 1147, 1299, 1638 |
| BsaWI | WCCGGW | 2 cut(s) | 28, 1288 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 127, 219, 524, 556, 583, 625, 975 |
| Bse1I | ACTGG | 2 cut(s) | 1251, 1271 |
| BseAI | TCCGGA | 2 cut(s) | 28, 1288 |
| BseBI | CCWGG | 3 cut(s) | 620, 646, 702 |
| BseDI | CCNNGG | 9 cut(s) | 433, 582, 618, 619, 700, 732, 1147, 1299, 1638 |
| BseGI | GGATG | 3 cut(s) | 202, 952, 1297 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 127, 219, 524, 556, 583, 625, 975 |
| BseMII | CTCAG | 2 cut(s) | 327, 398 |
| BseNI | ACTGG | 2 cut(s) | 1251, 1271 |
| BseRI | GAGGAG | 2 cut(s) | 507, 666 |
| BseXI | GCAGC | 9 cut(s) | 427, 480, 966, 994, 1174, 1222, 1396, 1462, 1622 |
| BsgI | GTGCAG | 1 cut(s) | 1484 |
| BshFI | GGCC | 1 cut(s) | 353 |
| BsiHKAI | GWGCWC | 1 cut(s) | 308 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1332 |
| BsiSI | CCGG | 3 cut(s) | 29, 128, 1289 |
| BslFI | GGGAC | 1 cut(s) | 1403 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 127, 219, 524, 556, 583, 625, 975 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsmBI | CGTCTC | 1 cut(s) | 32 |
| BsmFI | GGGAC | 1 cut(s) | 1403 |
| BsnI | GGCC | 1 cut(s) | 353 |
| BsoBI | CYCGRG | 1 cut(s) | 1332 |
| Bsp119I | TTCGAA | 1 cut(s) | 230 |
| Bsp1286I | GDGCHC | 1 cut(s) | 308 |
| Bsp13I | TCCGGA | 2 cut(s) | 28, 1288 |
| Bsp143I | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| Bsp19I | CCATGG | 1 cut(s) | 1147 |
| BspACI | CCGC | 3 cut(s) | 410, 1588, 1604 |
| BspANI | GGCC | 1 cut(s) | 353 |
| BspCNI | CTCAG | 2 cut(s) | 328, 397 |
| BspEI | TCCGGA | 2 cut(s) | 28, 1288 |
| BspHI | TCATGA | 1 cut(s) | 765 |
| BspMAI | CTGCAG | 2 cut(s) | 984, 1602 |
| BspPI | GGATC | 2 cut(s) | 460, 1277 |
| BspT104I | TTCGAA | 1 cut(s) | 230 |
| BsrBI | CCGCTC | 1 cut(s) | 412 |
| BsrI | ACTGG | 2 cut(s) | 1251, 1271 |
| BssECI | CCNNGG | 9 cut(s) | 433, 582, 618, 619, 700, 732, 1147, 1299, 1638 |
| BssMI | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| BssNAI | GTATAC | 1 cut(s) | 1530 |
| BssSI | CACGAG | 1 cut(s) | 1239 |
| BssT1I | CCWWGG | 4 cut(s) | 732, 1147, 1299, 1638 |
| Bst1107I | GTATAC | 1 cut(s) | 1530 |
| Bst2BI | CACGAG | 1 cut(s) | 1239 |
| Bst2UI | CCWGG | 3 cut(s) | 620, 646, 702 |
| Bst4CI | ACNGT | 1 cut(s) | 312 |
| Bst6I | CTCTTC | 7 cut(s) | 195, 212, 218, 272, 1084, 1163, 1374 |
| BstBI | TTCGAA | 1 cut(s) | 230 |
| BstC8I | GCNNGC | 1 cut(s) | 1602 |
| BstDEI | CTNAG | 6 cut(s) | 192, 336, 384, 879, 1056, 1654 |
| BstDSI | CCRYGG | 2 cut(s) | 582, 1147 |
| BstEII | GGTNACC | 1 cut(s) | 964 |
| BstF5I | GGATG | 3 cut(s) | 202, 952, 1297 |
| BstHHI | GCGC | 2 cut(s) | 57, 1509 |
| BstKTI | GATC | 6 cut(s) | 420, 455, 895, 922, 1285, 1597 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMBI | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1162, 1471, 1523, 1610 |
| BstNI | CCWGG | 3 cut(s) | 620, 646, 702 |
| BstNSI | RCATGY | 1 cut(s) | 1436 |
| BstPI | GGTNACC | 1 cut(s) | 964 |
| BstSCI | CCNGG | 3 cut(s) | 618, 644, 700 |
| BstSFI | CTRYAG | 2 cut(s) | 980, 1598 |
| BstV1I | GCAGC | 9 cut(s) | 427, 480, 966, 994, 1174, 1222, 1396, 1462, 1622 |
| BstV2I | GAAGAC | 2 cut(s) | 215, 1063 |
| BstX2I | RGATCY | 2 cut(s) | 452, 892 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1319 |
| BstYI | RGATCY | 2 cut(s) | 452, 892 |
| BstZ17I | GTATAC | 1 cut(s) | 1530 |
| BsuRI | GGCC | 1 cut(s) | 353 |
| BtgI | CCRYGG | 2 cut(s) | 582, 1147 |
| BtsCI | GGATG | 3 cut(s) | 202, 952, 1297 |
| BtsI | GCAGTG | 1 cut(s) | 1669 |
| BtsIMutI | CAGTG | 2 cut(s) | 1669, 1726 |
| Cac8I | GCNNGC | 1 cut(s) | 1602 |
| CaiI | CAGNNNCTG | 2 cut(s) | 455, 619 |
| CciI | TCATGA | 1 cut(s) | 765 |
| CfoI | GCGC | 2 cut(s) | 57, 1509 |
| Cfr13I | GGNCC | 1 cut(s) | 592 |
| CseI | GACGC | 2 cut(s) | 17, 279 |
| Csp6I | GTAC | 1 cut(s) | 1224 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 396, 431 |
| CviAII | CATG | 5 cut(s) | 578, 766, 1148, 1433, 1564 |
| CviQI | GTAC | 1 cut(s) | 1224 |
| DdeI | CTNAG | 6 cut(s) | 192, 336, 384, 879, 1056, 1654 |
| DpnI | GATC | 6 cut(s) | 419, 454, 894, 921, 1284, 1596 |
| DpnII | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| DriI | GACNNNNNGTC | 1 cut(s) | 428 |
| Eam1104I | CTCTTC | 7 cut(s) | 195, 212, 218, 272, 1084, 1163, 1374 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 428 |
| EarI | CTCTTC | 7 cut(s) | 195, 212, 218, 272, 1084, 1163, 1374 |
| Eco130I | CCWWGG | 4 cut(s) | 732, 1147, 1299, 1638 |
| Eco32I | GATATC | 1 cut(s) | 1144 |
| Eco47I | GGWCC | 1 cut(s) | 592 |
| Eco57I | CTGAAG | 2 cut(s) | 707, 1398 |
| Eco88I | CYCGRG | 1 cut(s) | 1332 |
| Eco91I | GGTNACC | 1 cut(s) | 964 |
| EcoO109I | RGGNCCY | 1 cut(s) | 592 |
| EcoO65I | GGTNACC | 1 cut(s) | 964 |
| EcoRII | CCWGG | 3 cut(s) | 618, 644, 700 |
| EcoRV | GATATC | 1 cut(s) | 1144 |
| EcoT14I | CCWWGG | 4 cut(s) | 732, 1147, 1299, 1638 |
| ErhI | CCWWGG | 4 cut(s) | 732, 1147, 1299, 1638 |
| Esp3I | CGTCTC | 1 cut(s) | 32 |
| FaeI | CATG | 5 cut(s) | 581, 769, 1151, 1436, 1567 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1559, 1591 |
| FaqI | GGGAC | 1 cut(s) | 1403 |
| FatI | CATG | 5 cut(s) | 577, 765, 1147, 1432, 1563 |
| FblI | GTMKAC | 3 cut(s) | 706, 1529, 1741 |
| Fnu4HI | GCNGC | 9 cut(s) | 441, 494, 980, 983, 1163, 1236, 1410, 1451, 1611 |
| FokI | GGATG | 3 cut(s) | 209, 959, 1304 |
| Fsp4HI | GCNGC | 9 cut(s) | 441, 494, 980, 983, 1163, 1236, 1410, 1451, 1611 |
| FspBI | CTAG | 2 cut(s) | 261, 1005 |
| FspI | TGCGCA | 1 cut(s) | 1508 |
| GlaI | GCGC | 2 cut(s) | 56, 1508 |
| GluI | GCNGC | 9 cut(s) | 441, 494, 980, 983, 1163, 1236, 1410, 1451, 1611 |
| GsuI | CTGGAG | 1 cut(s) | 1496 |
| HaeIII | GGCC | 1 cut(s) | 353 |
| HapII | CCGG | 3 cut(s) | 29, 128, 1289 |
| HgaI | GACGC | 2 cut(s) | 17, 279 |
| HhaI | GCGC | 2 cut(s) | 57, 1509 |
| Hin1II | CATG | 5 cut(s) | 581, 769, 1151, 1436, 1567 |
| Hin6I | GCGC | 2 cut(s) | 55, 1507 |
| HinP1I | GCGC | 2 cut(s) | 55, 1507 |
| HincII | GTYRAC | 2 cut(s) | 707, 1126 |
| HindII | GTYRAC | 2 cut(s) | 707, 1126 |
| HinfI | GANTC | 7 cut(s) | 86, 382, 388, 738, 1048, 1212, 1716 |
| HpaI | GTTAAC | 1 cut(s) | 1126 |
| HpaII | CCGG | 3 cut(s) | 29, 128, 1289 |
| HphI | GGTGA | 5 cut(s) | 286, 958, 1577, 1654, 1766 |
| Hpy166II | GTNNAC | 7 cut(s) | 707, 1126, 1244, 1264, 1530, 1585, 1742 |
| Hpy188III | TCNNGA | 9 cut(s) | 29, 359, 415, 713, 766, 1039, 1289, 1376, 1678 |
| Hpy8I | GTNNAC | 7 cut(s) | 707, 1126, 1244, 1264, 1530, 1585, 1742 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyCH4III | ACNGT | 1 cut(s) | 312 |
| HpyCH4IV | ACGT | 3 cut(s) | 664, 1122, 1128 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1162, 1471, 1523, 1610 |
| HpyF3I | CTNAG | 6 cut(s) | 192, 336, 384, 879, 1056, 1654 |
| HpySE526I | ACGT | 3 cut(s) | 664, 1122, 1128 |
| Hsp92II | CATG | 5 cut(s) | 581, 769, 1151, 1436, 1567 |
| HspAI | GCGC | 2 cut(s) | 55, 1507 |
| Kpn2I | TCCGGA | 2 cut(s) | 28, 1288 |
| KspAI | GTTAAC | 1 cut(s) | 1126 |
| Kzo9I | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| LmnI | GCTCC | 4 cut(s) | 287, 437, 490, 520 |
| Lsp1109I | GCAGC | 9 cut(s) | 427, 480, 966, 994, 1174, 1222, 1396, 1462, 1622 |
| LweI | GCATC | 3 cut(s) | 32, 1676, 1677 |
| MaeI | CTAG | 2 cut(s) | 261, 1005 |
| MaeII | ACGT | 3 cut(s) | 664, 1122, 1128 |
| MaeIII | GTNAC | 3 cut(s) | 964, 1085, 1467 |
| MalI | GATC | 6 cut(s) | 419, 454, 894, 921, 1284, 1596 |
| MbiI | CCGCTC | 1 cut(s) | 412 |
| MboI | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| MflI | RGATCY | 2 cut(s) | 452, 892 |
| MhlI | GDGCHC | 1 cut(s) | 308 |
| MluCI | AATT | 8 cut(s) | 12, 328, 682, 1097, 1388, 1552, 1645, 1769 |
| MlyI | GAGTC | 1 cut(s) | 376 |
| MroI | TCCGGA | 2 cut(s) | 28, 1288 |
| MroXI | GAANNNNTTC | 1 cut(s) | 344 |
| MseI | TTAA | 7 cut(s) | 828, 900, 1116, 1125, 1425, 1440, 1578 |
| MspA1I | CMGCKG | 3 cut(s) | 485, 1453, 1474 |
| MspI | CCGG | 3 cut(s) | 29, 128, 1289 |
| MspR9I | CCNGG | 3 cut(s) | 620, 646, 702 |
| MvaI | CCWGG | 3 cut(s) | 620, 646, 702 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1162, 1471, 1523, 1610 |
| NcoI | CCATGG | 1 cut(s) | 1147 |
| NdeII | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| NlaIII | CATG | 5 cut(s) | 581, 769, 1151, 1436, 1567 |
| NmuCI | GTSAC | 2 cut(s) | 964, 1467 |
| NsbI | TGCGCA | 1 cut(s) | 1508 |
| NspI | RCATGY | 1 cut(s) | 1436 |
| NspV | TTCGAA | 1 cut(s) | 230 |
| PaeR7I | CTCGAG | 1 cut(s) | 1332 |
| PagI | TCATGA | 1 cut(s) | 765 |
| PasI | CCCWGGG | 1 cut(s) | 619 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1330 |
| PdmI | GAANNNNTTC | 1 cut(s) | 344 |
| PfeI | GAWTC | 6 cut(s) | 86, 388, 738, 1048, 1212, 1716 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 583 |
| PkrI | GCNGC | 9 cut(s) | 442, 495, 981, 984, 1164, 1237, 1411, 1452, 1612 |
| PleI | GAGTC | 1 cut(s) | 376 |
| PpsI | GAGTC | 1 cut(s) | 376 |
| PpuMI | RGGWCCY | 1 cut(s) | 592 |
| Psp5II | RGGWCCY | 1 cut(s) | 592 |
| Psp6I | CCWGG | 3 cut(s) | 618, 644, 700 |
| PspEI | GGTNACC | 1 cut(s) | 964 |
| PspGI | CCWGG | 3 cut(s) | 618, 644, 700 |
| PspPI | GGNCC | 1 cut(s) | 592 |
| PspPPI | RGGWCCY | 1 cut(s) | 592 |
| PspXI | VCTCGAGB | 1 cut(s) | 1332 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 552, 584 |
| PstI | CTGCAG | 2 cut(s) | 984, 1602 |
| PstNI | CAGNNNCTG | 2 cut(s) | 455, 619 |
| PsuI | RGATCY | 2 cut(s) | 452, 892 |
| PvuII | CAGCTG | 3 cut(s) | 485, 1453, 1474 |
| RsaI | GTAC | 1 cut(s) | 1225 |
| RsaNI | GTAC | 1 cut(s) | 1224 |
| SalI | GTCGAC | 1 cut(s) | 705 |
| SaqAI | TTAA | 7 cut(s) | 828, 900, 1116, 1125, 1425, 1440, 1578 |
| SatI | GCNGC | 9 cut(s) | 441, 494, 980, 983, 1163, 1236, 1410, 1451, 1611 |
| Sau3AI | GATC | 6 cut(s) | 417, 452, 892, 919, 1282, 1594 |
| Sau96I | GGNCC | 1 cut(s) | 592 |
| SchI | GAGTC | 1 cut(s) | 376 |
| ScrFI | CCNGG | 3 cut(s) | 620, 646, 702 |
| SduI | GDGCHC | 1 cut(s) | 308 |
| SfaNI | GCATC | 3 cut(s) | 32, 1676, 1677 |
| SfcI | CTRYAG | 2 cut(s) | 980, 1598 |
| Sfr274I | CTCGAG | 1 cut(s) | 1332 |
| SfuI | TTCGAA | 1 cut(s) | 230 |
| SinI | GGWCC | 1 cut(s) | 592 |
| SlaI | CTCGAG | 1 cut(s) | 1332 |
| SmlI | CTYRAG | 1 cut(s) | 1332 |
| SmoI | CTYRAG | 1 cut(s) | 1332 |
| Sse9I | AATT | 8 cut(s) | 12, 328, 682, 1097, 1388, 1552, 1645, 1769 |
| SsiI | CCGC | 3 cut(s) | 410, 1588, 1604 |
| SspMI | CTAG | 2 cut(s) | 261, 1005 |
| StyD4I | CCNGG | 3 cut(s) | 618, 644, 700 |
| StyI | CCWWGG | 4 cut(s) | 732, 1147, 1299, 1638 |
| TaaI | ACNGT | 1 cut(s) | 312 |
| TaiI | ACGT | 3 cut(s) | 667, 1125, 1131 |
| TaqI | TCGA | 5 cut(s) | 230, 706, 1324, 1333, 1708 |
| TasI | AATT | 8 cut(s) | 12, 328, 682, 1097, 1388, 1552, 1645, 1769 |
| TfiI | GAWTC | 6 cut(s) | 86, 388, 738, 1048, 1212, 1716 |
| Tru1I | TTAA | 7 cut(s) | 828, 900, 1116, 1125, 1425, 1440, 1578 |
| Tru9I | TTAA | 7 cut(s) | 828, 900, 1116, 1125, 1425, 1440, 1578 |
| TscAI | CASTG | 2 cut(s) | 1669, 1726 |
| TseFI | GTSAC | 2 cut(s) | 964, 1467 |
| TseI | GCWGC | 9 cut(s) | 440, 493, 979, 982, 1162, 1235, 1409, 1450, 1610 |
| Tsp45I | GTSAC | 2 cut(s) | 964, 1467 |
| TspDTI | ATGAA | 8 cut(s) | 213, 380, 730, 789, 830, 987, 1308, 1580 |
| TspGWI | ACGGA | 1 cut(s) | 1081 |
| TspRI | CASTG | 2 cut(s) | 1669, 1726 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 583 |
| VpaK11BI | GGWCC | 1 cut(s) | 592 |
| XapI | RAATTY | 4 cut(s) | 328, 682, 1097, 1645 |
| XceI | RCATGY | 1 cut(s) | 1436 |
| XhoI | CTCGAG | 1 cut(s) | 1332 |
| XmiI | GTMKAC | 3 cut(s) | 706, 1529, 1741 |
| XmnI | GAANNNNTTC | 1 cut(s) | 344 |
| XspI | CTAG | 2 cut(s) | 261, 1005 |