Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001557.1

Orthogroup ID

OG0003249

Physical Location & Seq

Genomic Coordinates Reverse (-)

84717 .. 88727

Gene Structure 4011 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001557.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

atgaccgacccaatctcccacgcatctcccatggacgacgcgaagaagaggaagcgcaagagaaacagagcgaagaagccatcggaatcggaagttgcagagcaaccggagccccaaattgaagaagaagcggaaaacggagaaggcgaggagcaggctaagaagaaggagaagaagaggaagaagtcgaagaaattgaagggagaggaggaagcagcagaggctgaaatccctagcgagaccaaagaagaagaagatgaagatgcagaagaggaagaggagaagaaagagaaggaagagaagaaagagaagaaggtgaggagtggtggggggactgggattatgagcacagtgacctttgtttcattgaatttatcggagaaaactttctcggccattcaagaattgggctttcagcacatgactcagattcaatccagagcaatcccaccgcttttgatcggaagagatgtccttggagctgcaaggacagggtccgggaagactcttgcttttctggtgccagctgtggagttgttatataacgcaagcttttcgcctcgtaatggaactggtgttgttgtcatttgcccaactagggaactcgcaatacagtcccatgccgtggccaaggaccttctcaagaatcactcgcagactcttggtttggttattggtggttcggctagaagaggagaagcagagcgtcttgcaaaaggagtaaacctattggttgcaactcctggtcgccttcttgaccatctgcagaacaccaagggatttgtatataagaacttgaagtgcctcatcattgatgaagctgacaggatactggaagcaaactttgaggaagaaatgaaacaaatcattaacattctaccaaagaataggcaaacagctttattttctgcaacccagactaagaaggttgaagatcttgctcgcttgtccttccagacaacgcctatgtatatagatgtggatgatgggagaactaaggtcacgaatgaagggctgcaacaaggctattgtcttgtgccaagtgccaagagatttattctcctatattccttcctgacgaagaatctatcaaagaaagtgatggtcttcttctcttcttgtaactcagtgaaattccactccgaccttcttagatacattaatgtggattgctttgatatccatggaaagcaaaagcagcagaagaggacaagtactttttttgactactgcaaagcagagaaaggaatcttactttgtactgatgttgctgctcgtggcttggatatccccgccgtggactggattgtgcagtttgatcctccagatgaacccaaggaatatatccacagggttggtcgaacagctcgtggggaaggtggaaaaggaaatgcactacttttcctcattcctgaagagttgcagtttcttcgctatttgagggaagcaaaagtccctgttaaagagtatgaatttaatgagaagaagcttaaaaatgtgcaatctcagctggagaagttggttgccaacaactaccatctgaaccgtgcagcaaaagatgcatataggtcttatctgttagcatataattcacactctatgaaggacatctttaacgttcaccgactcgatctccaggcagttgcttcttcattttgcttttctaatccaccgaaggtaaatttaaacttggacagcagtgcatcaaagttccggaagaacatgcgtaaagtggatggagtccgacatggaatcaatcctaacaatccttatggaaggcaaagaggtggagatgatgacatgagacaatttgtgagacattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DUF4217 Helicase_C

Protein Analysis

607

Amino Acids

68.54

Weight (kDa)

9.05

Isoelectric Point (pI)

42.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18600
fragaria_vesca	FvH4_5g12870
malus_domestica	MD05G1177700.v1.1 MD06G1209500.v1.1 MD14G1220200.v1.1 MD15G1015500.v1.1
prunus_persica	Prupe.5G214700_v2.0.a1 Prupe.6G096100_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G096400_v2.0.a1 Prupe.6G097300_v2.0.a1
pyrus_communis	pycom05g16360 pycom05g16400 pycom05g16410 pycom06g18710 pycom14g18230 pycom15g01320
rosa_chinensis	RchiOBHm_Chr5g0083351 RchiOBHm_Chr5g0083361 RchiOBHm_Chr7g0184361
rosa_laevigata	RLG00000004982 RLG00000037030
rosa_multiflora	Rmu_sc0001444.1_g000013 Rmu_sc0001557.1_g000022 Rmu_sc0002245.1_g000045
rosa_roxburghii	Rroxscaffold_1G00001130 Rroxscaffold_3G00269690
rosa_samantha	Rh5AG533800 Rh5BG561600 Rh5CG583900 Rh5CG584000 Rh7AG080700 Rh7BG066500 Rh7CG066800 Rh7DG066500
rosa_wichuraiana	Rw5G049900 Rw7G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	520
AccB7I	CCANNNNNTGG	1 cut(s)	625
AccII	CGCG	1 cut(s)	41
AccIII	TCCGGA	1 cut(s)	1713
AciI	CCGC	3 cut(s)	131, 452, 1293
AclI	AACGTT	1 cut(s)	1617
AclWI	GGATC	1 cut(s)	1313
AcoI	YGGCCR	2 cut(s)	393, 627
AcsI	RAATTY	4 cut(s)	370, 1133, 1472, 1681
AcuI	CTGAAG	1 cut(s)	1434
AfaI	GTAC	2 cut(s)	1216, 1261
AfiI	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1297, 1302
AgsI	TTSAA	7 cut(s)	122, 199, 370, 401, 434, 799, 932
AjnI	CCWGG	2 cut(s)	742, 1635
AluBI	AGCT	8 cut(s)	482, 527, 552, 821, 899, 1367, 1489, 1510
AluI	AGCT	8 cut(s)	482, 527, 552, 821, 899, 1367, 1489, 1510
Alw21I	GWGCWC	1 cut(s)	350
Alw26I	GTCTC	3 cut(s)	233, 1798, 1810
AlwI	GGATC	1 cut(s)	1313
AlwNI	CAGNNNCTG	1 cut(s)	224
Aor13HI	TCCGGA	1 cut(s)	1713
AoxI	GGCC	2 cut(s)	393, 627
ApeKI	GCWGC	6 cut(s)	215, 482, 1015, 1198, 1271, 1550
ApoI	RAATTY	4 cut(s)	370, 1133, 1472, 1681
ArsI	GACNNNNNNTTYG	2 cut(s)	649, 681
AseI	ATTAAT	1 cut(s)	1161
Asp700I	GAANNNNTTC	1 cut(s)	386
AspLEI	GCGC	1 cut(s)	57
AspS9I	GGNCC	2 cut(s)	495, 634
AsuC2I	CCSGG	1 cut(s)	499
AsuHPI	GGTGA	2 cut(s)	328, 1613
AvaII	GGWCC	2 cut(s)	495, 634
BalI	TGGCCA	1 cut(s)	629
BanI	GGYRCC	1 cut(s)	520
BanII	GRGCYC	1 cut(s)	114
BauI	CACGAG	2 cut(s)	1275, 1368
BbsI	GAAGAC	2 cut(s)	509, 1099
Bbv12I	GWGCWC	1 cut(s)	350
BbvI	GCAGC	6 cut(s)	227, 469, 1002, 1210, 1258, 1562
BccI	CCATC	6 cut(s)	88, 768, 980, 1096, 1545, 1730
BceAI	ACGGC	2 cut(s)	608, 1280
BcgI	CGANNNNNNTGC	4 cut(s)	537, 571, 1412, 1446
BciT130I	CCWGG	2 cut(s)	744, 1637
BciVI	GTATCC	1 cut(s)	822
BcnI	CCSGG	1 cut(s)	499
BcoDI	GTCTC	3 cut(s)	233, 1798, 1810
BfaI	CTAG	3 cut(s)	234, 597, 687
BfmI	CTRYAG	1 cut(s)	764
BfuI	GTATCC	1 cut(s)	822
BglII	AGATCT	1 cut(s)	934
BisI	GCNGC	6 cut(s)	216, 483, 1016, 1199, 1272, 1551
BlsI	GCNGC	6 cut(s)	217, 484, 1017, 1200, 1273, 1552
BmcAI	AGTACT	1 cut(s)	1216
Bme1390I	CCNGG	3 cut(s)	499, 744, 1637
Bme18I	GGWCC	2 cut(s)	495, 634
BmgT120I	GGNCC	2 cut(s)	495, 634
BmiI	GGNNCC	3 cut(s)	111, 496, 522
BmrFI	CCNGG	3 cut(s)	499, 744, 1637
BmrI	ACTGGG	1 cut(s)	345
BmsI	GCATC	4 cut(s)	32, 253, 1549, 1712
BmuI	ACTGGG	1 cut(s)	345
BpiI	GAAGAC	2 cut(s)	509, 1099
BpmI	CTGGAG	3 cut(s)	1308, 1532, 1619
BpuEI	CTTGAG	1 cut(s)	626
BpuMI	CCSGG	1 cut(s)	499
BsaI	GGTCTC	1 cut(s)	233
BsaJI	CCNNGG	8 cut(s)	30, 475, 624, 630, 774, 1183, 1296, 1335
BsaWI	WCCGGW	2 cut(s)	106, 1713
BsaXI	ACNNNNNCTCC	3 cut(s)	29, 1617, 1647
Bsc4I	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1297, 1302
Bse1I	ACTGG	4 cut(s)	340, 577, 837, 1307
BseAI	TCCGGA	1 cut(s)	1713
BseBI	CCWGG	2 cut(s)	744, 1637
BseDI	CCNNGG	8 cut(s)	30, 475, 624, 630, 774, 1183, 1296, 1335
BseGI	GGATG	2 cut(s)	988, 1741
BseLI	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1297, 1302
BseMII	CTCAG	3 cut(s)	440, 1140, 1520
BseNI	ACTGG	4 cut(s)	340, 577, 837, 1307
BseRI	GAGGAG	5 cut(s)	164, 221, 293, 334, 708
BseXI	GCAGC	6 cut(s)	227, 469, 1002, 1210, 1258, 1562
BsgI	GTGCAG	2 cut(s)	1331, 1569
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	2 cut(s)	395, 629
BshNI	GGYRCC	1 cut(s)	520
BsiHKAI	GWGCWC	1 cut(s)	350
BsiSI	CCGG	3 cut(s)	107, 498, 1714
BslFI	GGGAC	3 cut(s)	346, 601, 1439
BslI	CCNNNNNNNGG	5 cut(s)	566, 598, 625, 1297, 1302
BsmAI	GTCTC	3 cut(s)	233, 1798, 1810
BsmFI	GGGAC	3 cut(s)	346, 601, 1439
BsnI	GGCC	2 cut(s)	395, 629
Bso31I	GGTCTC	1 cut(s)	233
Bsp1286I	GDGCHC	2 cut(s)	114, 350
Bsp13I	TCCGGA	1 cut(s)	1713
Bsp143I	GATC	4 cut(s)	459, 934, 1318, 1630
Bsp19I	CCATGG	2 cut(s)	30, 1183
BspACI	CCGC	3 cut(s)	131, 452, 1293
BspANI	GGCC	2 cut(s)	395, 629
BspCNI	CTCAG	3 cut(s)	439, 1139, 1519
BspEI	TCCGGA	1 cut(s)	1713
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	3 cut(s)	111, 496, 522
BspMAI	CTGCAG	1 cut(s)	768
BspPI	GGATC	1 cut(s)	1313
BspT107I	GGYRCC	1 cut(s)	520
BspTNI	GGTCTC	1 cut(s)	233
BsrI	ACTGG	4 cut(s)	340, 577, 837, 1307
BssECI	CCNNGG	8 cut(s)	30, 475, 624, 630, 774, 1183, 1296, 1335
BssMI	GATC	4 cut(s)	459, 934, 1318, 1630
BssSI	CACGAG	2 cut(s)	1275, 1368
BssT1I	CCWWGG	6 cut(s)	30, 475, 630, 774, 1183, 1335
Bst2BI	CACGAG	2 cut(s)	1275, 1368
Bst2UI	CCWGG	2 cut(s)	744, 1637
Bst4CI	ACNGT	3 cut(s)	352, 615, 1547
BstAPI	GCANNNNNTGC	1 cut(s)	1559
BstC8I	GCNNGC	4 cut(s)	156, 525, 550, 943
BstDEI	CTNAG	7 cut(s)	159, 426, 921, 996, 1126, 1151, 1506
BstDSI	CCRYGG	4 cut(s)	30, 624, 1183, 1296
BstF5I	GGATG	2 cut(s)	988, 1741
BstFNI	CGCG	1 cut(s)	41
BstHHI	GCGC	1 cut(s)	57
BstKTI	GATC	4 cut(s)	462, 937, 1321, 1633
BstMAI	GTCTC	3 cut(s)	233, 1798, 1810
BstMBI	GATC	4 cut(s)	459, 934, 1318, 1630
BstMWI	GCNNNNNNNGC	5 cut(s)	109, 221, 1198, 1507, 1559
BstNI	CCWGG	2 cut(s)	744, 1637
BstNSI	RCATGY	1 cut(s)	1726
BstSCI	CCNGG	3 cut(s)	497, 742, 1635
BstSFI	CTRYAG	1 cut(s)	764
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	6 cut(s)	227, 469, 1002, 1210, 1258, 1562
BstV2I	GAAGAC	2 cut(s)	509, 1099
BstX2I	RGATCY	1 cut(s)	934
BstXI	CCANNNNNNTGG	1 cut(s)	1355
BstYI	RGATCY	1 cut(s)	934
BsuI	GTATCC	1 cut(s)	822
BsuRI	GGCC	2 cut(s)	395, 629
BtgI	CCRYGG	4 cut(s)	30, 624, 1183, 1296
BtsCI	GGATG	2 cut(s)	988, 1741
BtsI	GCAGTG	1 cut(s)	1705
BtsIMutI	CAGTG	3 cut(s)	357, 1134, 1705
Cac8I	GCNNGC	4 cut(s)	156, 525, 550, 943
CaiI	CAGNNNCTG	1 cut(s)	224
CfoI	GCGC	1 cut(s)	57
Cfr13I	GGNCC	2 cut(s)	495, 634
CseI	GACGC	2 cut(s)	47, 695
Csp6I	GTAC	2 cut(s)	1215, 1260
CspCI	CAANNNNNGTGG	2 cut(s)	438, 473
CviAII	CATG	7 cut(s)	31, 421, 620, 1184, 1723, 1748, 1801
CviQI	GTAC	2 cut(s)	1215, 1260
DdeI	CTNAG	7 cut(s)	159, 426, 921, 996, 1126, 1151, 1506
DpnI	GATC	4 cut(s)	461, 936, 1320, 1632
DpnII	GATC	4 cut(s)	459, 934, 1318, 1630
DraI	TTTAAA	1 cut(s)	1686
EaeI	YGGCCR	2 cut(s)	393, 627
Eco130I	CCWWGG	6 cut(s)	30, 475, 630, 774, 1183, 1335
Eco24I	GRGCYC	1 cut(s)	114
Eco31I	GGTCTC	1 cut(s)	233
Eco32I	GATATC	2 cut(s)	1180, 1288
Eco47I	GGWCC	2 cut(s)	495, 634
Eco57I	CTGAAG	1 cut(s)	1434
EcoO109I	RGGNCCY	1 cut(s)	634
EcoRII	CCWGG	2 cut(s)	742, 1635
EcoRV	GATATC	2 cut(s)	1180, 1288
EcoT14I	CCWWGG	6 cut(s)	30, 475, 630, 774, 1183, 1335
EcoT22I	ATGCAT	1 cut(s)	1564
EcoT38I	GRGCYC	1 cut(s)	114
ErhI	CCWWGG	6 cut(s)	30, 475, 630, 774, 1183, 1335
FaeI	CATG	7 cut(s)	34, 424, 623, 1187, 1726, 1751, 1804
FalI	AAGNNNNNCTT	2 cut(s)	1595, 1627
FaqI	GGGAC	3 cut(s)	346, 601, 1439
FatI	CATG	7 cut(s)	30, 420, 619, 1183, 1722, 1747, 1800
FauI	CCCGC	1 cut(s)	1300
Fnu4HI	GCNGC	6 cut(s)	216, 483, 1016, 1199, 1272, 1551
FokI	GGATG	2 cut(s)	995, 1748
FriOI	GRGCYC	1 cut(s)	114
Fsp4HI	GCNGC	6 cut(s)	216, 483, 1016, 1199, 1272, 1551
FspBI	CTAG	3 cut(s)	234, 597, 687
GlaI	GCGC	1 cut(s)	56
GluI	GCNGC	6 cut(s)	216, 483, 1016, 1199, 1272, 1551
GsuI	CTGGAG	3 cut(s)	1308, 1532, 1619
HaeIII	GGCC	2 cut(s)	395, 629
HapII	CCGG	3 cut(s)	107, 498, 1714
HgaI	GACGC	2 cut(s)	47, 695
HhaI	GCGC	1 cut(s)	57
Hin1II	CATG	7 cut(s)	34, 424, 623, 1187, 1726, 1751, 1804
Hin6I	GCGC	1 cut(s)	55
HinP1I	GCGC	1 cut(s)	55
HindIII	AAGCTT	2 cut(s)	550, 1487
HpaII	CCGG	3 cut(s)	107, 498, 1714
HphI	GGTGA	2 cut(s)	328, 1613
Hpy166II	GTNNAC	3 cut(s)	724, 1300, 1621
Hpy188I	TCNGA	8 cut(s)	85, 91, 379, 429, 464, 1144, 1542, 1745
Hpy8I	GTNNAC	3 cut(s)	724, 1300, 1621
Hpy99I	CGWCG	1 cut(s)	41
HpyCH4III	ACNGT	3 cut(s)	352, 615, 1547
HpyCH4IV	ACGT	1 cut(s)	1617
HpyF10VI	GCNNNNNNNGC	5 cut(s)	109, 221, 1198, 1507, 1559
HpyF3I	CTNAG	7 cut(s)	159, 426, 921, 996, 1126, 1151, 1506
HpySE526I	ACGT	1 cut(s)	1617
Hsp92II	CATG	7 cut(s)	34, 424, 623, 1187, 1726, 1751, 1804
HspAI	GCGC	1 cut(s)	55
Kpn2I	TCCGGA	1 cut(s)	1713
Kzo9I	GATC	4 cut(s)	459, 934, 1318, 1630
LmnI	GCTCC	3 cut(s)	109, 151, 479
Lsp1109I	GCAGC	6 cut(s)	227, 469, 1002, 1210, 1258, 1562
LweI	GCATC	4 cut(s)	32, 253, 1549, 1712
MaeI	CTAG	3 cut(s)	234, 597, 687
MaeII	ACGT	1 cut(s)	1617
MaeIII	GTNAC	3 cut(s)	352, 1000, 1121
MalI	GATC	4 cut(s)	461, 936, 1320, 1632
MboI	GATC	4 cut(s)	459, 934, 1318, 1630
MflI	RGATCY	1 cut(s)	934
MhlI	GDGCHC	2 cut(s)	114, 350
MlsI	TGGCCA	1 cut(s)	629
MluCI	AATT	9 cut(s)	117, 194, 370, 404, 1133, 1472, 1588, 1681, 1808
MluNI	TGGCCA	1 cut(s)	629
MlyI	GAGTC	5 cut(s)	418, 499, 652, 1620, 1749
MmeI	TCCRAC	2 cut(s)	1167, 1768
Mox20I	TGGCCA	1 cut(s)	629
Mph1103I	ATGCAT	1 cut(s)	1564
MroI	TCCGGA	1 cut(s)	1713
MroXI	GAANNNNTTC	1 cut(s)	386
MscI	TGGCCA	1 cut(s)	629
MseI	TTAA	7 cut(s)	870, 1161, 1461, 1476, 1491, 1614, 1685
MslI	CAYNNNNRTG	1 cut(s)	1163
Msp20I	TGGCCA	1 cut(s)	629
MspA1I	CMGCKG	2 cut(s)	527, 1510
MspI	CCGG	3 cut(s)	107, 498, 1714
MspR9I	CCNGG	3 cut(s)	499, 744, 1637
MvaI	CCWGG	2 cut(s)	744, 1637
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	5 cut(s)	109, 221, 1198, 1507, 1559
NciI	CCSGG	1 cut(s)	499
NcoI	CCATGG	2 cut(s)	30, 1183
NdeII	GATC	4 cut(s)	459, 934, 1318, 1630
NlaIII	CATG	7 cut(s)	34, 424, 623, 1187, 1726, 1751, 1804
NlaIV	GGNNCC	3 cut(s)	111, 496, 522
NmeAIII	GCCGAG	1 cut(s)	371
NmuCI	GTSAC	2 cut(s)	352, 1000
NsiI	ATGCAT	1 cut(s)	1564
NspI	RCATGY	1 cut(s)	1726
PcsI	WCGNNNNNNNCGW	2 cut(s)	144, 1366
PdmI	GAANNNNTTC	1 cut(s)	386
PfeI	GAWTC	6 cut(s)	86, 430, 646, 1084, 1248, 1752
PflFI	GACNNNGTC	1 cut(s)	493
PflMI	CCANNNNNTGG	1 cut(s)	625
PfoI	TCCNGGA	1 cut(s)	497
PkrI	GCNGC	6 cut(s)	217, 484, 1017, 1200, 1273, 1552
PleI	GAGTC	5 cut(s)	418, 499, 652, 1620, 1748
PpsI	GAGTC	5 cut(s)	418, 499, 652, 1620, 1748
PpuMI	RGGWCCY	1 cut(s)	634
PshBI	ATTAAT	1 cut(s)	1161
Psp1406I	AACGTT	1 cut(s)	1617
Psp5II	RGGWCCY	1 cut(s)	634
Psp6I	CCWGG	2 cut(s)	742, 1635
PspGI	CCWGG	2 cut(s)	742, 1635
PspN4I	GGNNCC	3 cut(s)	111, 496, 522
PspPI	GGNCC	2 cut(s)	495, 634
PspPPI	RGGWCCY	1 cut(s)	634
PsrI	GAACNNNNNNTAC	2 cut(s)	594, 626
PstI	CTGCAG	1 cut(s)	768
PstNI	CAGNNNCTG	1 cut(s)	224
PsuI	RGATCY	1 cut(s)	934
PsyI	GACNNNGTC	1 cut(s)	493
PvuII	CAGCTG	2 cut(s)	527, 1510
RsaI	GTAC	2 cut(s)	1216, 1261
RsaNI	GTAC	2 cut(s)	1215, 1260
RseI	CAYNNNNRTG	1 cut(s)	1163
SaqAI	TTAA	7 cut(s)	870, 1161, 1461, 1476, 1491, 1614, 1685
SatI	GCNGC	6 cut(s)	216, 483, 1016, 1199, 1272, 1551
Sau3AI	GATC	4 cut(s)	459, 934, 1318, 1630
Sau96I	GGNCC	2 cut(s)	495, 634
ScaI	AGTACT	1 cut(s)	1216
SchI	GAGTC	5 cut(s)	418, 499, 652, 1620, 1749
ScrFI	CCNGG	3 cut(s)	499, 744, 1637
SduI	GDGCHC	2 cut(s)	114, 350
SfaNI	GCATC	4 cut(s)	32, 253, 1549, 1712
SfcI	CTRYAG	1 cut(s)	764
SinI	GGWCC	2 cut(s)	495, 634
SmiMI	CAYNNNNRTG	1 cut(s)	1163
SmlI	CTYRAG	1 cut(s)	641
SmoI	CTYRAG	1 cut(s)	641
Sse9I	AATT	9 cut(s)	117, 194, 370, 404, 1133, 1472, 1588, 1681, 1808
SsiI	CCGC	3 cut(s)	131, 452, 1293
SspMI	CTAG	3 cut(s)	234, 597, 687
StyD4I	CCNGG	3 cut(s)	497, 742, 1635
StyI	CCWWGG	6 cut(s)	30, 475, 630, 774, 1183, 1335
TaaI	ACNGT	3 cut(s)	352, 615, 1547
TaiI	ACGT	1 cut(s)	1620
TaqI	TCGA	3 cut(s)	188, 1360, 1629
TaqII	GACCGA	1 cut(s)	20
TasI	AATT	9 cut(s)	117, 194, 370, 404, 1133, 1472, 1588, 1681, 1808
TatI	WGTACW	2 cut(s)	1214, 1259
TfiI	GAWTC	6 cut(s)	86, 430, 646, 1084, 1248, 1752
Tru1I	TTAA	7 cut(s)	870, 1161, 1461, 1476, 1491, 1614, 1685
Tru9I	TTAA	7 cut(s)	870, 1161, 1461, 1476, 1491, 1614, 1685
TscAI	CASTG	3 cut(s)	357, 1134, 1705
TseFI	GTSAC	2 cut(s)	352, 1000
TseI	GCWGC	6 cut(s)	215, 482, 1015, 1198, 1271, 1550
Tsp45I	GTSAC	2 cut(s)	352, 1000
TspDTI	ATGAA	9 cut(s)	273, 354, 831, 872, 1023, 1344, 1485, 1616, 1641
TspGWI	ACGGA	1 cut(s)	153
TspRI	CASTG	3 cut(s)	357, 1134, 1705
Tth111I	GACNNNGTC	1 cut(s)	493
Van91I	CCANNNNNTGG	1 cut(s)	625
VpaK11BI	GGWCC	2 cut(s)	495, 634
VspI	ATTAAT	1 cut(s)	1161
XapI	RAATTY	4 cut(s)	370, 1133, 1472, 1681
XceI	RCATGY	1 cut(s)	1726
XcmI	CCANNNNNNNNNTGG	1 cut(s)	403
XmnI	GAANNNNTTC	1 cut(s)	386
XspI	CTAG	3 cut(s)	234, 597, 687
ZrmI	AGTACT	1 cut(s)	1216
Zsp2I	ATGCAT	1 cut(s)	1564

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.