component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1296 |
| AarI | CACCTGC | 2 cut(s) | 80, 1608 |
| Acc36I | ACCTGC | 4 cut(s) | 80, 802, 1608, 1932 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 865, 2032 |
| AccII | CGCG | 3 cut(s) | 110, 845, 2778 |
| AciI | CCGC | 4 cut(s) | 316, 1429, 1966, 2505 |
| AclWI | GGATC | 3 cut(s) | 1142, 2637, 2737 |
| AcoI | YGGCCR | 2 cut(s) | 922, 2599 |
| AcsI | RAATTY | 3 cut(s) | 1087, 1121, 1562 |
| AcuI | CTGAAG | 6 cut(s) | 488, 588, 600, 678, 862, 1722 |
| AdeI | CACNNNGTG | 1 cut(s) | 1766 |
| AfaI | GTAC | 5 cut(s) | 339, 600, 995, 1166, 2569 |
| AfeI | AGCGCT | 1 cut(s) | 200 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 127, 865, 2032, 2251, 2358 |
| AflII | CTTAAG | 1 cut(s) | 1270 |
| AflIII | ACRYGT | 1 cut(s) | 2324 |
| AgsI | TTSAA | 6 cut(s) | 448, 1129, 1220, 1249, 1283, 2116 |
| AjnI | CCWGG | 8 cut(s) | 21, 910, 1362, 1863, 2042, 2484, 2601, 2645 |
| AleI | CACNNNNGTG | 1 cut(s) | 1158 |
| Alw21I | GWGCWC | 2 cut(s) | 1863, 2301 |
| Alw26I | GTCTC | 7 cut(s) | 12, 125, 1168, 1676, 1774, 2472, 2584 |
| AlwI | GGATC | 3 cut(s) | 1142, 2637, 2737 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 329, 466, 578, 611, 865, 1415 |
| Aor51HI | AGCGCT | 1 cut(s) | 200 |
| AoxI | GGCC | 6 cut(s) | 441, 922, 1095, 1360, 2046, 2599 |
| ApaI | GGGCCC | 1 cut(s) | 2050 |
| ApoI | RAATTY | 3 cut(s) | 1087, 1121, 1562 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 185, 217 |
| AseI | ATTAAT | 2 cut(s) | 501, 936 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 37 |
| AspLEI | GCGC | 5 cut(s) | 112, 201, 1941, 2257, 2780 |
| AsuHPI | GGTGA | 6 cut(s) | 104, 218, 1367, 1535, 1589, 2072 |
| AsuII | TTCGAA | 1 cut(s) | 116 |
| AvaII | GGWCC | 9 cut(s) | 18, 721, 1068, 1458, 2003, 2023, 2175, 2314, 2703 |
| BaeGI | GKGCMC | 1 cut(s) | 2050 |
| BalI | TGGCCA | 1 cut(s) | 2601 |
| BanII | GRGCYC | 3 cut(s) | 1863, 2050, 2301 |
| BauI | CACGAG | 4 cut(s) | 736, 780, 1158, 1518 |
| BbsI | GAAGAC | 2 cut(s) | 854, 1828 |
| Bbv12I | GWGCWC | 2 cut(s) | 1863, 2301 |
| BbvCI | CCTCAGC | 1 cut(s) | 522 |
| BccI | CCATC | 9 cut(s) | 62, 155, 694, 1058, 1079, 1346, 1402, 1459, 2508 |
| BceAI | ACGGC | 1 cut(s) | 937 |
| BciT130I | CCWGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| BclI | TGATCA | 2 cut(s) | 1695, 2286 |
| BcoDI | GTCTC | 7 cut(s) | 12, 125, 1168, 1676, 1774, 2472, 2584 |
| BfaI | CTAG | 4 cut(s) | 726, 2135, 2372, 2625 |
| BfmI | CTRYAG | 2 cut(s) | 1601, 2427 |
| BfoI | RGCGCY | 1 cut(s) | 202 |
| BfrI | CTTAAG | 1 cut(s) | 1270 |
| BfuAI | ACCTGC | 4 cut(s) | 80, 802, 1608, 1932 |
| BglII | AGATCT | 3 cut(s) | 182, 732, 2458 |
| BlpI | GCTNAGC | 1 cut(s) | 1335 |
| Bme1390I | CCNGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| Bme18I | GGWCC | 9 cut(s) | 18, 721, 1068, 1458, 2003, 2023, 2175, 2314, 2703 |
| BmiI | GGNNCC | 8 cut(s) | 20, 723, 1026, 1069, 1368, 2024, 2048, 2315 |
| BmrFI | CCNGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| BmrI | ACTGGG | 1 cut(s) | 268 |
| BmsI | GCATC | 5 cut(s) | 397, 1306, 1885, 1921, 2130 |
| BmuI | ACTGGG | 1 cut(s) | 268 |
| BoxI | GACNNNNGTC | 1 cut(s) | 839 |
| BpiI | GAAGAC | 2 cut(s) | 854, 1828 |
| BpmI | CTGGAG | 5 cut(s) | 149, 887, 1782, 1835, 1886 |
| Bpu10I | CCTNAGC | 2 cut(s) | 522, 1857 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1335 |
| Bpu14I | TTCGAA | 1 cut(s) | 116 |
| BpuEI | CTTGAG | 4 cut(s) | 323, 392, 1994, 2129 |
| Bsa29I | ATCGAT | 1 cut(s) | 78 |
| BsaBI | GATNNNNATC | 3 cut(s) | 906, 1539, 2285 |
| BsaI | GGTCTC | 1 cut(s) | 1676 |
| BsaJI | CCNNGG | 8 cut(s) | 21, 22, 189, 438, 837, 1656, 2043, 2646 |
| BsaWI | WCCGGW | 1 cut(s) | 1375 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 44, 74, 1990, 2020 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 127, 865, 2032, 2251, 2358 |
| Bse118I | RCCGGY | 1 cut(s) | 2705 |
| Bse1I | ACTGG | 3 cut(s) | 263, 802, 2380 |
| Bse3DI | GCAATG | 3 cut(s) | 1145, 1530, 2422 |
| Bse8I | GATNNNNATC | 3 cut(s) | 906, 1539, 2285 |
| BseBI | CCWGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| BseCI | ATCGAT | 1 cut(s) | 78 |
| BseDI | CCNNGG | 8 cut(s) | 21, 22, 189, 438, 837, 1656, 2043, 2646 |
| BseGI | GGATG | 9 cut(s) | 52, 568, 631, 652, 1036, 1189, 1507, 1564, 2198 |
| BseJI | GATNNNNATC | 3 cut(s) | 906, 1539, 2285 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 127, 865, 2032, 2251, 2358 |
| BseMI | GCAATG | 3 cut(s) | 1145, 1530, 2422 |
| BseMII | CTCAG | 9 cut(s) | 33, 536, 908, 1326, 1407, 1848, 2162, 2379, 2747 |
| BseNI | ACTGG | 3 cut(s) | 263, 802, 2380 |
| BseRI | GAGGAG | 3 cut(s) | 65, 506, 569 |
| BseSI | GKGCMC | 1 cut(s) | 2050 |
| BseYI | CCCAGC | 2 cut(s) | 2310, 2498 |
| BsgI | GTGCAG | 4 cut(s) | 567, 977, 1010, 1259 |
| Bsh1236I | CGCG | 3 cut(s) | 110, 845, 2778 |
| BshFI | GGCC | 6 cut(s) | 443, 924, 1097, 1362, 2048, 2601 |
| BshVI | ATCGAT | 1 cut(s) | 78 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1863, 2301 |
| BsiSI | CCGG | 3 cut(s) | 1028, 1376, 2706 |
| BslFI | GGGAC | 4 cut(s) | 755, 1081, 2036, 2327 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 127, 865, 2032, 2251, 2358 |
| BsmAI | GTCTC | 7 cut(s) | 12, 125, 1168, 1676, 1774, 2472, 2584 |
| BsmBI | CGTCTC | 1 cut(s) | 12 |
| BsmFI | GGGAC | 4 cut(s) | 755, 1081, 2036, 2327 |
| BsmI | GAATGC | 1 cut(s) | 244 |
| BsnI | GGCC | 6 cut(s) | 443, 924, 1097, 1362, 2048, 2601 |
| Bso31I | GGTCTC | 1 cut(s) | 1676 |
| Bsp119I | TTCGAA | 1 cut(s) | 116 |
| Bsp120I | GGGCCC | 1 cut(s) | 2046 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1863, 2050, 2301 |
| Bsp143I | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1335 |
| Bsp19I | CCATGG | 1 cut(s) | 1656 |
| Bsp68I | TCGCGA | 1 cut(s) | 845 |
| BspACI | CCGC | 4 cut(s) | 316, 1429, 1966, 2505 |
| BspANI | GGCC | 6 cut(s) | 443, 924, 1097, 1362, 2048, 2601 |
| BspCNI | CTCAG | 9 cut(s) | 34, 535, 907, 1327, 1408, 1849, 2163, 2380, 2746 |
| BspDI | ATCGAT | 1 cut(s) | 78 |
| BspFNI | CGCG | 3 cut(s) | 110, 845, 2778 |
| BspHI | TCATGA | 2 cut(s) | 714, 1786 |
| BspLI | GGNNCC | 8 cut(s) | 20, 723, 1026, 1069, 1368, 2024, 2048, 2315 |
| BspMAI | CTGCAG | 1 cut(s) | 1605 |
| BspMI | ACCTGC | 4 cut(s) | 80, 802, 1608, 1932 |
| BspPI | GGATC | 3 cut(s) | 1142, 2637, 2737 |
| BspQI | GCTCTTC | 1 cut(s) | 2289 |
| BspT104I | TTCGAA | 1 cut(s) | 116 |
| BspTI | CTTAAG | 1 cut(s) | 1270 |
| BspTNI | GGTCTC | 1 cut(s) | 1676 |
| BsrDI | GCAATG | 3 cut(s) | 1145, 1530, 2422 |
| BsrFI | RCCGGY | 1 cut(s) | 2705 |
| BsrI | ACTGG | 3 cut(s) | 263, 802, 2380 |
| BssAI | RCCGGY | 1 cut(s) | 2705 |
| BssECI | CCNNGG | 8 cut(s) | 21, 22, 189, 438, 837, 1656, 2043, 2646 |
| BssMI | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| BssSI | CACGAG | 4 cut(s) | 736, 780, 1158, 1518 |
| BssT1I | CCWWGG | 4 cut(s) | 189, 438, 837, 1656 |
| Bst2BI | CACGAG | 4 cut(s) | 736, 780, 1158, 1518 |
| Bst2UI | CCWGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| Bst4CI | ACNGT | 4 cut(s) | 223, 1009, 2357, 2582 |
| Bst6I | CTCTTC | 5 cut(s) | 546, 654, 1735, 2157, 2289 |
| BstAFI | CTTAAG | 1 cut(s) | 1270 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 964, 1406, 2405 |
| BstBI | TTCGAA | 1 cut(s) | 116 |
| BstC8I | GCNNGC | 7 cut(s) | 269, 668, 1136, 1758, 2308, 2397, 2692 |
| BstDSI | CCRYGG | 1 cut(s) | 1656 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2249 |
| BstF5I | GGATG | 9 cut(s) | 52, 568, 631, 652, 1036, 1189, 1507, 1564, 2198 |
| BstFNI | CGCG | 3 cut(s) | 110, 845, 2778 |
| BstH2I | RGCGCY | 1 cut(s) | 202 |
| BstHHI | GCGC | 5 cut(s) | 112, 201, 1941, 2257, 2780 |
| BstKTI | GATC | 9 cut(s) | 185, 735, 1150, 1698, 2157, 2289, 2461, 2632, 2732 |
| BstMAI | GTCTC | 7 cut(s) | 12, 125, 1168, 1676, 1774, 2472, 2584 |
| BstMBI | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| BstNI | CCWGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| BstNSI | RCATGY | 2 cut(s) | 931, 1404 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 839 |
| BstSCI | CCNGG | 8 cut(s) | 21, 910, 1362, 1863, 2042, 2484, 2601, 2645 |
| BstSFI | CTRYAG | 2 cut(s) | 1601, 2427 |
| BstSLI | GKGCMC | 1 cut(s) | 2050 |
| BstUI | CGCG | 3 cut(s) | 110, 845, 2778 |
| BstV2I | GAAGAC | 2 cut(s) | 854, 1828 |
| BstX2I | RGATCY | 4 cut(s) | 182, 732, 2458, 2729 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2609 |
| BstYI | RGATCY | 4 cut(s) | 182, 732, 2458, 2729 |
| Bsu15I | ATCGAT | 1 cut(s) | 78 |
| BsuRI | GGCC | 6 cut(s) | 443, 924, 1097, 1362, 2048, 2601 |
| BsuTUI | ATCGAT | 1 cut(s) | 78 |
| BtgI | CCRYGG | 1 cut(s) | 1656 |
| BtsCI | GGATG | 9 cut(s) | 52, 568, 631, 652, 1036, 1189, 1507, 1564, 2198 |
| BtsI | GCAGTG | 1 cut(s) | 1878 |
| BtsIMutI | CAGTG | 4 cut(s) | 886, 1698, 1878, 2587 |
| BtuMI | TCGCGA | 1 cut(s) | 845 |
| BveI | ACCTGC | 4 cut(s) | 80, 802, 1608, 1932 |
| Cac8I | GCNNGC | 7 cut(s) | 269, 668, 1136, 1758, 2308, 2397, 2692 |
| CaiI | CAGNNNCTG | 6 cut(s) | 329, 466, 578, 611, 865, 1415 |
| CciI | TCATGA | 2 cut(s) | 714, 1786 |
| CfoI | GCGC | 5 cut(s) | 112, 201, 1941, 2257, 2780 |
| Cfr10I | RCCGGY | 1 cut(s) | 2705 |
| ClaI | ATCGAT | 1 cut(s) | 78 |
| CseI | GACGC | 1 cut(s) | 116 |
| Csp6I | GTAC | 5 cut(s) | 338, 599, 994, 1165, 2568 |
| CviQI | GTAC | 5 cut(s) | 338, 599, 994, 1165, 2568 |
| DpnI | GATC | 9 cut(s) | 184, 734, 1149, 1697, 2156, 2288, 2460, 2631, 2731 |
| DpnII | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| DraIII | CACNNNGTG | 1 cut(s) | 1766 |
| EaeI | YGGCCR | 2 cut(s) | 922, 2599 |
| Eam1104I | CTCTTC | 5 cut(s) | 546, 654, 1735, 2157, 2289 |
| EarI | CTCTTC | 5 cut(s) | 546, 654, 1735, 2157, 2289 |
| Ecl136II | GAGCTC | 2 cut(s) | 1861, 2299 |
| Eco130I | CCWWGG | 4 cut(s) | 189, 438, 837, 1656 |
| Eco147I | AGGCCT | 1 cut(s) | 443 |
| Eco24I | GRGCYC | 3 cut(s) | 1863, 2050, 2301 |
| Eco31I | GGTCTC | 1 cut(s) | 1676 |
| Eco32I | GATATC | 3 cut(s) | 76, 1537, 1784 |
| Eco47I | GGWCC | 9 cut(s) | 18, 721, 1068, 1458, 2003, 2023, 2175, 2314, 2703 |
| Eco47III | AGCGCT | 1 cut(s) | 200 |
| Eco53kI | GAGCTC | 2 cut(s) | 1861, 2299 |
| Eco57I | CTGAAG | 6 cut(s) | 488, 588, 600, 678, 862, 1722 |
| EcoICRI | GAGCTC | 2 cut(s) | 1861, 2299 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2249 |
| EcoO109I | RGGNCCY | 5 cut(s) | 721, 2003, 2046, 2047, 2175 |
| EcoRI | GAATTC | 1 cut(s) | 1121 |
| EcoRII | CCWGG | 8 cut(s) | 21, 910, 1362, 1863, 2042, 2484, 2601, 2645 |
| EcoRV | GATATC | 3 cut(s) | 76, 1537, 1784 |
| EcoT14I | CCWWGG | 4 cut(s) | 189, 438, 837, 1656 |
| EcoT22I | ATGCAT | 1 cut(s) | 1145 |
| EcoT38I | GRGCYC | 3 cut(s) | 1863, 2050, 2301 |
| ErhI | CCWWGG | 4 cut(s) | 189, 438, 837, 1656 |
| Esp3I | CGTCTC | 1 cut(s) | 12 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 960, 992, 1253, 1285, 2286, 2318 |
| FaqI | GGGAC | 4 cut(s) | 755, 1081, 2036, 2327 |
| FauI | CCCGC | 2 cut(s) | 1436, 2498 |
| FauNDI | CATATG | 3 cut(s) | 1620, 1842, 2686 |
| FbaI | TGATCA | 2 cut(s) | 1695, 2286 |
| FokI | GGATG | 9 cut(s) | 59, 575, 638, 659, 1043, 1196, 1514, 1571, 2185 |
| FriOI | GRGCYC | 3 cut(s) | 1863, 2050, 2301 |
| FspBI | CTAG | 4 cut(s) | 726, 2135, 2372, 2625 |
| GlaI | GCGC | 5 cut(s) | 111, 200, 1940, 2256, 2779 |
| GsaI | CCCAGC | 2 cut(s) | 2314, 2502 |
| GsuI | CTGGAG | 5 cut(s) | 149, 887, 1782, 1835, 1886 |
| HaeII | RGCGCY | 1 cut(s) | 202 |
| HaeIII | GGCC | 6 cut(s) | 443, 924, 1097, 1362, 2048, 2601 |
| HapII | CCGG | 3 cut(s) | 1028, 1376, 2706 |
| HgaI | GACGC | 1 cut(s) | 116 |
| HhaI | GCGC | 5 cut(s) | 112, 201, 1941, 2257, 2780 |
| Hin6I | GCGC | 5 cut(s) | 110, 199, 1939, 2255, 2778 |
| HinP1I | GCGC | 5 cut(s) | 110, 199, 1939, 2255, 2778 |
| HincII | GTYRAC | 1 cut(s) | 2385 |
| HindII | GTYRAC | 1 cut(s) | 2385 |
| HindIII | AAGCTT | 1 cut(s) | 2108 |
| HpaII | CCGG | 3 cut(s) | 1028, 1376, 2706 |
| HphI | GGTGA | 6 cut(s) | 104, 218, 1367, 1535, 1589, 2072 |
| Hpy166II | GTNNAC | 3 cut(s) | 226, 751, 2385 |
| Hpy8I | GTNNAC | 3 cut(s) | 226, 751, 2385 |
| HpyCH4III | ACNGT | 4 cut(s) | 223, 1009, 2357, 2582 |
| HpyCH4IV | ACGT | 3 cut(s) | 744, 2326, 2346 |
| HpySE526I | ACGT | 3 cut(s) | 744, 2326, 2346 |
| HspAI | GCGC | 5 cut(s) | 110, 199, 1939, 2255, 2778 |
| Ksp22I | TGATCA | 2 cut(s) | 1695, 2286 |
| Kzo9I | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| LguI | GCTCTTC | 1 cut(s) | 2289 |
| LmnI | GCTCC | 6 cut(s) | 493, 1024, 1052, 1366, 1866, 2304 |
| LweI | GCATC | 5 cut(s) | 397, 1306, 1885, 1921, 2130 |
| MaeI | CTAG | 4 cut(s) | 726, 2135, 2372, 2625 |
| MaeII | ACGT | 3 cut(s) | 744, 2326, 2346 |
| MaeIII | GTNAC | 5 cut(s) | 92, 139, 1577, 1595, 2060 |
| MalI | GATC | 9 cut(s) | 184, 734, 1149, 1697, 2156, 2288, 2460, 2631, 2731 |
| MboI | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| MflI | RGATCY | 4 cut(s) | 182, 732, 2458, 2729 |
| MhlI | GDGCHC | 3 cut(s) | 1863, 2050, 2301 |
| MlsI | TGGCCA | 1 cut(s) | 2601 |
| MluCI | AATT | 7 cut(s) | 710, 933, 1087, 1121, 1328, 1562, 2089 |
| MluNI | TGGCCA | 1 cut(s) | 2601 |
| MlyI | GAGTC | 6 cut(s) | 164, 335, 566, 1603, 2203, 2254 |
| MmeI | TCCRAC | 1 cut(s) | 540 |
| Mox20I | TGGCCA | 1 cut(s) | 2601 |
| Mph1103I | ATGCAT | 1 cut(s) | 1145 |
| MroXI | GAANNNNTTC | 1 cut(s) | 37 |
| MscI | TGGCCA | 1 cut(s) | 2601 |
| MseI | TTAA | 5 cut(s) | 501, 762, 936, 1271, 1851 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1158, 1399 |
| Msp20I | TGGCCA | 1 cut(s) | 2601 |
| MspA1I | CMGCKG | 1 cut(s) | 2720 |
| MspCI | CTTAAG | 1 cut(s) | 1270 |
| MspI | CCGG | 3 cut(s) | 1028, 1376, 2706 |
| MspR9I | CCNGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| Mva1269I | GAATGC | 1 cut(s) | 244 |
| MvaI | CCWGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| MvnI | CGCG | 3 cut(s) | 110, 845, 2778 |
| NcoI | CCATGG | 1 cut(s) | 1656 |
| NdeI | CATATG | 3 cut(s) | 1620, 1842, 2686 |
| NdeII | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| NlaIV | GGNNCC | 8 cut(s) | 20, 723, 1026, 1069, 1368, 2024, 2048, 2315 |
| NmeAIII | GCCGAG | 1 cut(s) | 552 |
| NmuCI | GTSAC | 5 cut(s) | 92, 139, 1577, 1595, 2060 |
| NruI | TCGCGA | 1 cut(s) | 845 |
| NsiI | ATGCAT | 1 cut(s) | 1145 |
| NspI | RCATGY | 2 cut(s) | 931, 1404 |
| NspV | TTCGAA | 1 cut(s) | 116 |
| OliI | CACNNNNGTG | 1 cut(s) | 1158 |
| PagI | TCATGA | 2 cut(s) | 714, 1786 |
| PaqCI | CACCTGC | 2 cut(s) | 80, 1608 |
| PasI | CCCWGGG | 1 cut(s) | 22 |
| PceI | AGGCCT | 1 cut(s) | 443 |
| PciSI | GCTCTTC | 1 cut(s) | 2289 |
| PctI | GAATGC | 1 cut(s) | 244 |
| PdmI | GAANNNNTTC | 1 cut(s) | 37 |
| PfeI | GAWTC | 5 cut(s) | 38, 517, 907, 1040, 2119 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 865, 2032 |
| PfoI | TCCNGGA | 1 cut(s) | 1863 |
| PleI | GAGTC | 6 cut(s) | 163, 334, 565, 1602, 2203, 2254 |
| PpsI | GAGTC | 6 cut(s) | 163, 334, 565, 1602, 2203, 2254 |
| PpuMI | RGGWCCY | 3 cut(s) | 721, 2003, 2175 |
| PshAI | GACNNNNGTC | 1 cut(s) | 839 |
| PshBI | ATTAAT | 2 cut(s) | 501, 936 |
| PsiI | TTATAA | 1 cut(s) | 1296 |
| Psp124BI | GAGCTC | 2 cut(s) | 1863, 2301 |
| Psp5II | RGGWCCY | 3 cut(s) | 721, 2003, 2175 |
| Psp6I | CCWGG | 8 cut(s) | 21, 910, 1362, 1863, 2042, 2484, 2601, 2645 |
| PspFI | CCCAGC | 2 cut(s) | 2310, 2498 |
| PspGI | CCWGG | 8 cut(s) | 21, 910, 1362, 1863, 2042, 2484, 2601, 2645 |
| PspN4I | GGNNCC | 8 cut(s) | 20, 723, 1026, 1069, 1368, 2024, 2048, 2315 |
| PspOMI | GGGCCC | 1 cut(s) | 2046 |
| PspPPI | RGGWCCY | 3 cut(s) | 721, 2003, 2175 |
| PstI | CTGCAG | 1 cut(s) | 1605 |
| PstNI | CAGNNNCTG | 6 cut(s) | 329, 466, 578, 611, 865, 1415 |
| PsuI | RGATCY | 4 cut(s) | 182, 732, 2458, 2729 |
| PvuII | CAGCTG | 1 cut(s) | 2720 |
| RruI | TCGCGA | 1 cut(s) | 845 |
| RsaI | GTAC | 5 cut(s) | 339, 600, 995, 1166, 2569 |
| RsaNI | GTAC | 5 cut(s) | 338, 599, 994, 1165, 2568 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1158, 1399 |
| SacI | GAGCTC | 2 cut(s) | 1863, 2301 |
| SapI | GCTCTTC | 1 cut(s) | 2289 |
| SaqAI | TTAA | 5 cut(s) | 501, 762, 936, 1271, 1851 |
| Sau3AI | GATC | 9 cut(s) | 182, 732, 1147, 1695, 2154, 2286, 2458, 2629, 2729 |
| SbfI | CCTGCAGG | 1 cut(s) | 1605 |
| SchI | GAGTC | 6 cut(s) | 164, 335, 566, 1603, 2203, 2254 |
| ScrFI | CCNGG | 8 cut(s) | 23, 912, 1364, 1865, 2044, 2486, 2603, 2647 |
| SdaI | CCTGCAGG | 1 cut(s) | 1605 |
| SduI | GDGCHC | 3 cut(s) | 1863, 2050, 2301 |
| SfaNI | GCATC | 5 cut(s) | 397, 1306, 1885, 1921, 2130 |
| SfcI | CTRYAG | 2 cut(s) | 1601, 2427 |
| SfuI | TTCGAA | 1 cut(s) | 116 |
| SinI | GGWCC | 9 cut(s) | 18, 721, 1068, 1458, 2003, 2023, 2175, 2314, 2703 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1158, 1399 |
| SmlI | CTYRAG | 5 cut(s) | 302, 371, 1270, 1973, 2144 |
| SmoI | CTYRAG | 5 cut(s) | 302, 371, 1270, 1973, 2144 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1605 |
| Sse9I | AATT | 7 cut(s) | 710, 933, 1087, 1121, 1328, 1562, 2089 |
| SseBI | AGGCCT | 1 cut(s) | 443 |
| SsiI | CCGC | 4 cut(s) | 316, 1429, 1966, 2505 |
| SspI | AATATT | 2 cut(s) | 1226, 1612 |
| SspMI | CTAG | 4 cut(s) | 726, 2135, 2372, 2625 |
| SstI | GAGCTC | 2 cut(s) | 1863, 2301 |
| StuI | AGGCCT | 1 cut(s) | 443 |
| StyD4I | CCNGG | 8 cut(s) | 21, 910, 1362, 1863, 2042, 2484, 2601, 2645 |
| StyI | CCWWGG | 4 cut(s) | 189, 438, 837, 1656 |
| TaaI | ACNGT | 4 cut(s) | 223, 1009, 2357, 2582 |
| TaiI | ACGT | 3 cut(s) | 747, 2329, 2349 |
| TaqI | TCGA | 6 cut(s) | 10, 78, 116, 1170, 1899, 2079 |
| TasI | AATT | 7 cut(s) | 710, 933, 1087, 1121, 1328, 1562, 2089 |
| TatI | WGTACW | 1 cut(s) | 1164 |
| TauI | GCSGC | 1 cut(s) | 1969 |
| TfiI | GAWTC | 5 cut(s) | 38, 517, 907, 1040, 2119 |
| Tru1I | TTAA | 5 cut(s) | 501, 762, 936, 1271, 1851 |
| Tru9I | TTAA | 5 cut(s) | 501, 762, 936, 1271, 1851 |
| TscAI | CASTG | 4 cut(s) | 886, 1705, 1878, 2587 |
| TseFI | GTSAC | 5 cut(s) | 92, 139, 1577, 1595, 2060 |
| Tsp45I | GTSAC | 5 cut(s) | 92, 139, 1577, 1595, 2060 |
| TspRI | CASTG | 4 cut(s) | 886, 1705, 1878, 2587 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 865, 2032 |
| Vha464I | CTTAAG | 1 cut(s) | 1270 |
| VpaK11BI | GGWCC | 9 cut(s) | 18, 721, 1068, 1458, 2003, 2023, 2175, 2314, 2703 |
| VspI | ATTAAT | 2 cut(s) | 501, 936 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2249 |
| XapI | RAATTY | 3 cut(s) | 1087, 1121, 1562 |
| XceI | RCATGY | 2 cut(s) | 931, 1404 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 939, 1327 |
| XmnI | GAANNNNTTC | 1 cut(s) | 37 |
| XspI | CTAG | 4 cut(s) | 726, 2135, 2372, 2625 |
| Zsp2I | ATGCAT | 1 cut(s) | 1145 |