component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1278 |
| AarI | CACCTGC | 4 cut(s) | 784, 1405, 1608, 2515 |
| Acc16I | TGCGCA | 2 cut(s) | 840, 2262 |
| Acc36I | ACCTGC | 5 cut(s) | 784, 1405, 1608, 2469, 2515 |
| Acc65I | GGTACC | 1 cut(s) | 2495 |
| AccB1I | GGYRCC | 2 cut(s) | 331, 2495 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 388 |
| AccI | GTMKAC | 1 cut(s) | 2457 |
| AclI | AACGTT | 1 cut(s) | 1994 |
| AcoI | YGGCCR | 1 cut(s) | 2605 |
| AcsI | RAATTY | 4 cut(s) | 11, 597, 740, 1225 |
| AcuI | CTGAAG | 2 cut(s) | 90, 482 |
| AcyI | GRCGYC | 1 cut(s) | 833 |
| AfaI | GTAC | 4 cut(s) | 482, 1148, 1208, 2497 |
| AfeI | AGCGCT | 3 cut(s) | 354, 387, 1251 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 388, 608, 1363, 1870, 2196 |
| AflII | CTTAAG | 1 cut(s) | 119 |
| AflIII | ACRYGT | 1 cut(s) | 1139 |
| AjnI | CCWGG | 4 cut(s) | 892, 1863, 2484, 2633 |
| AleI | CACNNNNGTG | 1 cut(s) | 1140 |
| Alw21I | GWGCWC | 4 cut(s) | 1422, 1863, 2355, 2776 |
| Alw26I | GTCTC | 5 cut(s) | 180, 1158, 1774, 2472, 2727 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 460, 578, 1642 |
| Ama87I | CYCGRG | 2 cut(s) | 515, 848 |
| Aor51HI | AGCGCT | 3 cut(s) | 354, 387, 1251 |
| AoxI | GGCC | 7 cut(s) | 378, 1354, 1390, 1458, 1653, 2073, 2605 |
| ApoI | RAATTY | 4 cut(s) | 11, 597, 740, 1225 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 179, 211, 2167, 2199 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 34, 1611, 2237 |
| Asp718I | GGTACC | 1 cut(s) | 2495 |
| AspS9I | GGNCC | 7 cut(s) | 379, 1391, 1458, 1653, 2003, 2175, 2638 |
| AsuC2I | CCSGG | 3 cut(s) | 1856, 2500, 2575 |
| AsuHPI | GGTGA | 4 cut(s) | 95, 268, 316, 1589 |
| AsuNHI | GCTAGC | 1 cut(s) | 1756 |
| AvaI | CYCGRG | 2 cut(s) | 515, 848 |
| AvaII | GGWCC | 3 cut(s) | 2003, 2175, 2638 |
| AxyI | CCTNAGG | 1 cut(s) | 2114 |
| BaeGI | GKGCMC | 1 cut(s) | 909 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2479, 2512 |
| BalI | TGGCCA | 1 cut(s) | 2607 |
| BanI | GGYRCC | 2 cut(s) | 331, 2495 |
| BanII | GRGCYC | 3 cut(s) | 1422, 1863, 2050 |
| BauI | CACGAG | 1 cut(s) | 718 |
| Bbv12I | GWGCWC | 4 cut(s) | 1422, 1863, 2355, 2776 |
| BbvCI | CCTCAGC | 1 cut(s) | 2051 |
| BccI | CCATC | 6 cut(s) | 149, 623, 1040, 1459, 1551, 2722 |
| BceAI | ACGGC | 1 cut(s) | 1405 |
| BciT130I | CCWGG | 4 cut(s) | 894, 1865, 2486, 2635 |
| BciVI | GTATCC | 2 cut(s) | 987, 2725 |
| BclI | TGATCA | 1 cut(s) | 729 |
| BcnI | CCSGG | 3 cut(s) | 1856, 2500, 2575 |
| BcoDI | GTCTC | 5 cut(s) | 180, 1158, 1774, 2472, 2727 |
| BfaI | CTAG | 4 cut(s) | 708, 1556, 1757, 2358 |
| BfoI | RGCGCY | 3 cut(s) | 356, 389, 1253 |
| BfrI | CTTAAG | 1 cut(s) | 119 |
| BfuAI | ACCTGC | 5 cut(s) | 784, 1405, 1608, 2469, 2515 |
| BfuI | GTATCC | 2 cut(s) | 987, 2725 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 2470, 2613 |
| BlpI | GCTNAGC | 1 cut(s) | 1317 |
| BmcAI | AGTACT | 1 cut(s) | 1208 |
| Bme1390I | CCNGG | 7 cut(s) | 894, 1856, 1865, 2486, 2500, 2575, 2635 |
| Bme18I | GGWCC | 3 cut(s) | 2003, 2175, 2638 |
| BmeT110I | CYCGRG | 2 cut(s) | 515, 848 |
| BmgT120I | GGNCC | 7 cut(s) | 379, 1391, 1458, 1653, 2003, 2175, 2638 |
| BmiI | GGNNCC | 5 cut(s) | 333, 2005, 2497, 2569, 2639 |
| BmrFI | CCNGG | 7 cut(s) | 894, 1856, 1865, 2486, 2500, 2575, 2635 |
| BmrI | ACTGGG | 1 cut(s) | 2661 |
| BmsI | GCATC | 7 cut(s) | 14, 297, 391, 1288, 1330, 1821, 2130 |
| BmtI | GCTAGC | 1 cut(s) | 1760 |
| BmuI | ACTGGG | 1 cut(s) | 2661 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2707, 2739 |
| BpmI | CTGGAG | 3 cut(s) | 1782, 1835, 1886 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1253, 1416, 2051 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1317 |
| BpuEI | CTTGAG | 3 cut(s) | 317, 2129, 2532 |
| BpuMI | CCSGG | 3 cut(s) | 1856, 2500, 2575 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2285 |
| BsaHI | GRCGYC | 1 cut(s) | 833 |
| BsaI | GGTCTC | 1 cut(s) | 2727 |
| BsaJI | CCNNGG | 7 cut(s) | 213, 432, 892, 1427, 1656, 1762, 2634 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 388, 608, 1363, 1870, 2196 |
| Bse1I | ACTGG | 3 cut(s) | 31, 2617, 2656 |
| Bse21I | CCTNAGG | 1 cut(s) | 2114 |
| Bse3DI | GCAATG | 4 cut(s) | 433, 1127, 1530, 2263 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2285 |
| BseBI | CCWGG | 4 cut(s) | 894, 1865, 2486, 2635 |
| BseDI | CCNNGG | 7 cut(s) | 213, 432, 892, 1427, 1656, 1762, 2634 |
| BseGI | GGATG | 5 cut(s) | 49, 406, 634, 1000, 1336 |
| BseJI | GATNNNNATC | 1 cut(s) | 2285 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 388, 608, 1363, 1870, 2196 |
| BseMI | GCAATG | 4 cut(s) | 433, 1127, 1530, 2263 |
| BseNI | ACTGG | 3 cut(s) | 31, 2617, 2656 |
| BsePI | GCGCGC | 1 cut(s) | 2302 |
| BseSI | GKGCMC | 1 cut(s) | 909 |
| BsgI | GTGCAG | 2 cut(s) | 992, 2472 |
| BshFI | GGCC | 7 cut(s) | 380, 1356, 1392, 1460, 1655, 2075, 2607 |
| BshNI | GGYRCC | 2 cut(s) | 331, 2495 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1422, 1863, 2355, 2776 |
| BsiHKCI | CYCGRG | 2 cut(s) | 515, 848 |
| BsiSI | CCGG | 4 cut(s) | 551, 1856, 2499, 2574 |
| BslFI | GGGAC | 6 cut(s) | 790, 1592, 2515, 2651, 2662, 2680 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 388, 608, 1363, 1870, 2196 |
| BsmAI | GTCTC | 5 cut(s) | 180, 1158, 1774, 2472, 2727 |
| BsmBI | CGTCTC | 1 cut(s) | 1158 |
| BsmFI | GGGAC | 6 cut(s) | 790, 1592, 2515, 2651, 2662, 2680 |
| BsmI | GAATGC | 2 cut(s) | 214, 238 |
| BsnI | GGCC | 7 cut(s) | 380, 1356, 1392, 1460, 1655, 2075, 2607 |
| Bso31I | GGTCTC | 1 cut(s) | 2727 |
| BsoBI | CYCGRG | 2 cut(s) | 515, 848 |
| Bsp1286I | GDGCHC | 6 cut(s) | 909, 1422, 1863, 2050, 2355, 2776 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1317 |
| Bsp19I | CCATGG | 1 cut(s) | 1656 |
| Bsp68I | TCGCGA | 1 cut(s) | 2231 |
| BspANI | GGCC | 7 cut(s) | 380, 1356, 1392, 1460, 1655, 2075, 2607 |
| BspHI | TCATGA | 2 cut(s) | 696, 1786 |
| BspLI | GGNNCC | 5 cut(s) | 333, 2005, 2497, 2569, 2639 |
| BspMI | ACCTGC | 5 cut(s) | 784, 1405, 1608, 2469, 2515 |
| BspOI | GCTAGC | 1 cut(s) | 1760 |
| BspT107I | GGYRCC | 2 cut(s) | 331, 2495 |
| BspTI | CTTAAG | 1 cut(s) | 119 |
| BspTNI | GGTCTC | 1 cut(s) | 2727 |
| BsrDI | GCAATG | 4 cut(s) | 433, 1127, 1530, 2263 |
| BsrI | ACTGG | 3 cut(s) | 31, 2617, 2656 |
| BssECI | CCNNGG | 7 cut(s) | 213, 432, 892, 1427, 1656, 1762, 2634 |
| BssHII | GCGCGC | 1 cut(s) | 2302 |
| BssNI | GRCGYC | 1 cut(s) | 833 |
| BssSI | CACGAG | 1 cut(s) | 718 |
| BssT1I | CCWWGG | 3 cut(s) | 432, 1656, 1762 |
| Bst2BI | CACGAG | 1 cut(s) | 718 |
| Bst2UI | CCWGG | 4 cut(s) | 894, 1865, 2486, 2635 |
| Bst4CI | ACNGT | 3 cut(s) | 217, 272, 1728 |
| Bst6I | CTCTTC | 2 cut(s) | 552, 1735 |
| BstACI | GRCGYC | 1 cut(s) | 833 |
| BstAFI | CTTAAG | 1 cut(s) | 119 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 946 |
| BstDSI | CCRYGG | 2 cut(s) | 213, 1656 |
| BstF5I | GGATG | 5 cut(s) | 49, 406, 634, 1000, 1336 |
| BstH2I | RGCGCY | 3 cut(s) | 356, 389, 1253 |
| BstMAI | GTCTC | 5 cut(s) | 180, 1158, 1774, 2472, 2727 |
| BstNI | CCWGG | 4 cut(s) | 894, 1865, 2486, 2635 |
| BstNSI | RCATGY | 3 cut(s) | 913, 949, 2261 |
| BstSCI | CCNGG | 7 cut(s) | 892, 1854, 1863, 2484, 2498, 2573, 2633 |
| BstSLI | GKGCMC | 1 cut(s) | 909 |
| BstX2I | RGATCY | 3 cut(s) | 176, 703, 1468 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1897, 2492 |
| BstYI | RGATCY | 3 cut(s) | 176, 703, 1468 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2114 |
| BsuI | GTATCC | 2 cut(s) | 987, 2725 |
| BsuRI | GGCC | 7 cut(s) | 380, 1356, 1392, 1460, 1655, 2075, 2607 |
| BtgI | CCRYGG | 2 cut(s) | 213, 1656 |
| BtgZI | GCGATG | 3 cut(s) | 159, 461, 1515 |
| BtsCI | GGATG | 5 cut(s) | 49, 406, 634, 1000, 1336 |
| BtsI | GCAGTG | 1 cut(s) | 1354 |
| BtsIMutI | CAGTG | 2 cut(s) | 1354, 2779 |
| BtuMI | TCGCGA | 1 cut(s) | 2231 |
| BveI | ACCTGC | 5 cut(s) | 784, 1405, 1608, 2469, 2515 |
| CaiI | CAGNNNCTG | 3 cut(s) | 460, 578, 1642 |
| CciI | TCATGA | 2 cut(s) | 696, 1786 |
| Cfr13I | GGNCC | 7 cut(s) | 379, 1391, 1458, 1653, 2003, 2175, 2638 |
| CseI | GACGC | 2 cut(s) | 841, 1343 |
| Csp6I | GTAC | 4 cut(s) | 481, 1147, 1207, 2496 |
| CviQI | GTAC | 4 cut(s) | 481, 1147, 1207, 2496 |
| DraI | TTTAAA | 1 cut(s) | 1231 |
| EaeI | YGGCCR | 1 cut(s) | 2605 |
| Eam1104I | CTCTTC | 2 cut(s) | 552, 1735 |
| EarI | CTCTTC | 2 cut(s) | 552, 1735 |
| EciI | GGCGGA | 1 cut(s) | 2631 |
| Ecl136II | GAGCTC | 2 cut(s) | 1420, 1861 |
| Eco130I | CCWWGG | 3 cut(s) | 432, 1656, 1762 |
| Eco147I | AGGCCT | 1 cut(s) | 2075 |
| Eco24I | GRGCYC | 3 cut(s) | 1422, 1863, 2050 |
| Eco31I | GGTCTC | 1 cut(s) | 2727 |
| Eco32I | GATATC | 1 cut(s) | 1784 |
| Eco47I | GGWCC | 3 cut(s) | 2003, 2175, 2638 |
| Eco47III | AGCGCT | 3 cut(s) | 354, 387, 1251 |
| Eco53kI | GAGCTC | 2 cut(s) | 1420, 1861 |
| Eco57I | CTGAAG | 2 cut(s) | 90, 482 |
| Eco81I | CCTNAGG | 1 cut(s) | 2114 |
| Eco88I | CYCGRG | 2 cut(s) | 515, 848 |
| EcoICRI | GAGCTC | 2 cut(s) | 1420, 1861 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1458, 2003, 2175 |
| EcoRII | CCWGG | 4 cut(s) | 892, 1863, 2484, 2633 |
| EcoRV | GATATC | 1 cut(s) | 1784 |
| EcoT14I | CCWWGG | 3 cut(s) | 432, 1656, 1762 |
| EcoT22I | ATGCAT | 1 cut(s) | 1127 |
| EcoT38I | GRGCYC | 3 cut(s) | 1422, 1863, 2050 |
| ErhI | CCWWGG | 3 cut(s) | 432, 1656, 1762 |
| Esp3I | CGTCTC | 1 cut(s) | 1158 |
| FaqI | GGGAC | 6 cut(s) | 790, 1592, 2515, 2651, 2662, 2680 |
| FauI | CCCGC | 5 cut(s) | 756, 896, 1251, 1526, 1569 |
| FauNDI | CATATG | 2 cut(s) | 1173, 1842 |
| FbaI | TGATCA | 1 cut(s) | 729 |
| FblI | GTMKAC | 1 cut(s) | 2457 |
| FokI | GGATG | 5 cut(s) | 56, 413, 641, 1007, 1343 |
| FriOI | GRGCYC | 3 cut(s) | 1422, 1863, 2050 |
| FspAI | RTGCGCAY | 1 cut(s) | 2262 |
| FspBI | CTAG | 4 cut(s) | 708, 1556, 1757, 2358 |
| FspI | TGCGCA | 2 cut(s) | 840, 2262 |
| GsuI | CTGGAG | 3 cut(s) | 1782, 1835, 1886 |
| HaeII | RGCGCY | 3 cut(s) | 356, 389, 1253 |
| HaeIII | GGCC | 7 cut(s) | 380, 1356, 1392, 1460, 1655, 2075, 2607 |
| HapII | CCGG | 4 cut(s) | 551, 1856, 2499, 2574 |
| HgaI | GACGC | 2 cut(s) | 841, 1343 |
| Hin1I | GRCGYC | 1 cut(s) | 833 |
| HincII | GTYRAC | 3 cut(s) | 220, 889, 2089 |
| HindII | GTYRAC | 3 cut(s) | 220, 889, 2089 |
| HindIII | AAGCTT | 1 cut(s) | 2215 |
| HpaII | CCGG | 4 cut(s) | 551, 1856, 2499, 2574 |
| HphI | GGTGA | 4 cut(s) | 95, 268, 316, 1589 |
| Hpy166II | GTNNAC | 5 cut(s) | 220, 889, 1998, 2089, 2458 |
| Hpy8I | GTNNAC | 5 cut(s) | 220, 889, 1998, 2089, 2458 |
| HpyCH4III | ACNGT | 3 cut(s) | 217, 272, 1728 |
| HpyCH4IV | ACGT | 3 cut(s) | 809, 1994, 2122 |
| HpySE526I | ACGT | 3 cut(s) | 809, 1994, 2122 |
| Hsp92I | GRCGYC | 1 cut(s) | 833 |
| KpnI | GGTACC | 1 cut(s) | 2499 |
| Ksp22I | TGATCA | 1 cut(s) | 729 |
| LmnI | GCTCC | 5 cut(s) | 799, 1858, 1866, 2115, 2573 |
| LweI | GCATC | 7 cut(s) | 14, 297, 391, 1288, 1330, 1821, 2130 |
| MaeI | CTAG | 4 cut(s) | 708, 1556, 1757, 2358 |
| MaeII | ACGT | 3 cut(s) | 809, 1994, 2122 |
| MaeIII | GTNAC | 4 cut(s) | 313, 1532, 1595, 2414 |
| MfeI | CAATTG | 1 cut(s) | 2381 |
| MflI | RGATCY | 3 cut(s) | 176, 703, 1468 |
| MhlI | GDGCHC | 6 cut(s) | 909, 1422, 1863, 2050, 2355, 2776 |
| MlsI | TGGCCA | 1 cut(s) | 2607 |
| MluI | ACGCGT | 1 cut(s) | 1139 |
| MluNI | TGGCCA | 1 cut(s) | 2607 |
| MlyI | GAGTC | 5 cut(s) | 329, 891, 1603, 2203, 2734 |
| MmeI | TCCRAC | 2 cut(s) | 47, 614 |
| Mox20I | TGGCCA | 1 cut(s) | 2607 |
| Mph1103I | ATGCAT | 1 cut(s) | 1127 |
| MroXI | GAANNNNTTC | 3 cut(s) | 34, 1611, 2237 |
| MscI | TGGCCA | 1 cut(s) | 2607 |
| MseI | TTAA | 5 cut(s) | 120, 129, 495, 1230, 1647 |
| MslI | CAYNNNNRTG | 2 cut(s) | 165, 1140 |
| Msp20I | TGGCCA | 1 cut(s) | 2607 |
| MspA1I | CMGCKG | 2 cut(s) | 805, 903 |
| MspCI | CTTAAG | 1 cut(s) | 119 |
| MspI | CCGG | 4 cut(s) | 551, 1856, 2499, 2574 |
| MspR9I | CCNGG | 7 cut(s) | 894, 1856, 1865, 2486, 2500, 2575, 2635 |
| MunI | CAATTG | 1 cut(s) | 2381 |
| Mva1269I | GAATGC | 2 cut(s) | 214, 238 |
| MvaI | CCWGG | 4 cut(s) | 894, 1865, 2486, 2635 |
| NciI | CCSGG | 3 cut(s) | 1856, 2500, 2575 |
| NcoI | CCATGG | 1 cut(s) | 1656 |
| NdeI | CATATG | 2 cut(s) | 1173, 1842 |
| NheI | GCTAGC | 1 cut(s) | 1756 |
| NlaIV | GGNNCC | 5 cut(s) | 333, 2005, 2497, 2569, 2639 |
| NmuCI | GTSAC | 3 cut(s) | 313, 1532, 1595 |
| NruI | TCGCGA | 1 cut(s) | 2231 |
| NsbI | TGCGCA | 2 cut(s) | 840, 2262 |
| NsiI | ATGCAT | 1 cut(s) | 1127 |
| NspI | RCATGY | 3 cut(s) | 913, 949, 2261 |
| OliI | CACNNNNGTG | 1 cut(s) | 1140 |
| PaeR7I | CTCGAG | 1 cut(s) | 848 |
| PagI | TCATGA | 2 cut(s) | 696, 1786 |
| PaqCI | CACCTGC | 4 cut(s) | 784, 1405, 1608, 2515 |
| PauI | GCGCGC | 1 cut(s) | 2302 |
| PceI | AGGCCT | 1 cut(s) | 2075 |
| PctI | GAATGC | 2 cut(s) | 214, 238 |
| PdmI | GAANNNNTTC | 3 cut(s) | 34, 1611, 2237 |
| PflFI | GACNNNGTC | 1 cut(s) | 319 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 388 |
| PfoI | TCCNGGA | 1 cut(s) | 1863 |
| PleI | GAGTC | 5 cut(s) | 328, 891, 1602, 2203, 2734 |
| PpsI | GAGTC | 5 cut(s) | 328, 891, 1602, 2203, 2734 |
| PpuMI | RGGWCCY | 2 cut(s) | 2003, 2175 |
| PsiI | TTATAA | 1 cut(s) | 1278 |
| Psp124BI | GAGCTC | 2 cut(s) | 1422, 1863 |
| Psp1406I | AACGTT | 1 cut(s) | 1994 |
| Psp5II | RGGWCCY | 2 cut(s) | 2003, 2175 |
| Psp6I | CCWGG | 4 cut(s) | 892, 1863, 2484, 2633 |
| PspGI | CCWGG | 4 cut(s) | 892, 1863, 2484, 2633 |
| PspN4I | GGNNCC | 5 cut(s) | 333, 2005, 2497, 2569, 2639 |
| PspPI | GGNCC | 7 cut(s) | 379, 1391, 1458, 1653, 2003, 2175, 2638 |
| PspPPI | RGGWCCY | 2 cut(s) | 2003, 2175 |
| PstNI | CAGNNNCTG | 3 cut(s) | 460, 578, 1642 |
| PsuI | RGATCY | 3 cut(s) | 176, 703, 1468 |
| PsyI | GACNNNGTC | 1 cut(s) | 319 |
| PteI | GCGCGC | 1 cut(s) | 2302 |
| PvuII | CAGCTG | 1 cut(s) | 805 |
| RruI | TCGCGA | 1 cut(s) | 2231 |
| RsaI | GTAC | 4 cut(s) | 482, 1148, 1208, 2497 |
| RsaNI | GTAC | 4 cut(s) | 481, 1147, 1207, 2496 |
| RseI | CAYNNNNRTG | 2 cut(s) | 165, 1140 |
| SacI | GAGCTC | 2 cut(s) | 1422, 1863 |
| SaqAI | TTAA | 5 cut(s) | 120, 129, 495, 1230, 1647 |
| Sau96I | GGNCC | 7 cut(s) | 379, 1391, 1458, 1653, 2003, 2175, 2638 |
| ScaI | AGTACT | 1 cut(s) | 1208 |
| SchI | GAGTC | 5 cut(s) | 329, 891, 1603, 2203, 2734 |
| ScrFI | CCNGG | 7 cut(s) | 894, 1856, 1865, 2486, 2500, 2575, 2635 |
| SduI | GDGCHC | 6 cut(s) | 909, 1422, 1863, 2050, 2355, 2776 |
| SfaNI | GCATC | 7 cut(s) | 14, 297, 391, 1288, 1330, 1821, 2130 |
| Sfr274I | CTCGAG | 1 cut(s) | 848 |
| SinI | GGWCC | 3 cut(s) | 2003, 2175, 2638 |
| SlaI | CTCGAG | 1 cut(s) | 848 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 165, 1140 |
| SmlI | CTYRAG | 5 cut(s) | 119, 296, 848, 2144, 2547 |
| SmoI | CTYRAG | 5 cut(s) | 119, 296, 848, 2144, 2547 |
| SseBI | AGGCCT | 1 cut(s) | 2075 |
| SspI | AATATT | 1 cut(s) | 985 |
| SspMI | CTAG | 4 cut(s) | 708, 1556, 1757, 2358 |
| SstI | GAGCTC | 2 cut(s) | 1422, 1863 |
| StuI | AGGCCT | 1 cut(s) | 2075 |
| StyD4I | CCNGG | 7 cut(s) | 892, 1854, 1863, 2484, 2498, 2573, 2633 |
| StyI | CCWWGG | 3 cut(s) | 432, 1656, 1762 |
| TaaI | ACNGT | 3 cut(s) | 217, 272, 1728 |
| TaiI | ACGT | 3 cut(s) | 812, 1997, 2125 |
| TaqI | TCGA | 9 cut(s) | 8, 366, 849, 1974, 2136, 2241, 2349, 2662, 2738 |
| TaqII | GACCGA | 2 cut(s) | 332, 2655 |
| TatI | WGTACW | 2 cut(s) | 1146, 1206 |
| TauI | GCSGC | 1 cut(s) | 2448 |
| Tru1I | TTAA | 5 cut(s) | 120, 129, 495, 1230, 1647 |
| Tru9I | TTAA | 5 cut(s) | 120, 129, 495, 1230, 1647 |
| TscAI | CASTG | 1 cut(s) | 1354 |
| TseFI | GTSAC | 3 cut(s) | 313, 1532, 1595 |
| Tsp45I | GTSAC | 3 cut(s) | 313, 1532, 1595 |
| TspDTI | ATGAA | 7 cut(s) | 221, 464, 685, 1035, 1994, 2087, 2697 |
| TspGWI | ACGGA | 1 cut(s) | 169 |
| TspRI | CASTG | 1 cut(s) | 1354 |
| Tth111I | GACNNNGTC | 1 cut(s) | 319 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 388 |
| Vha464I | CTTAAG | 1 cut(s) | 119 |
| VpaK11BI | GGWCC | 3 cut(s) | 2003, 2175, 2638 |
| XapI | RAATTY | 4 cut(s) | 11, 597, 740, 1225 |
| XceI | RCATGY | 3 cut(s) | 913, 949, 2261 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1309 |
| XhoI | CTCGAG | 1 cut(s) | 848 |
| XmiI | GTMKAC | 1 cut(s) | 2457 |
| XmnI | GAANNNNTTC | 3 cut(s) | 34, 1611, 2237 |
| XspI | CTAG | 4 cut(s) | 708, 1556, 1757, 2358 |
| ZrmI | AGTACT | 1 cut(s) | 1208 |
| Zsp2I | ATGCAT | 1 cut(s) | 1127 |