Rh7DG443500

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
62970321 .. 62974140
3820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG443500.1

Sequence Viewer

Length: 2793 bp
ATGGCGTCTCGATTTTGGACCCAGAATGGAAGCGATTCCGAGGATGAGGAGAGCGAGTATGGAGATGGTGAGATTGAGAATACAGGAGGTGACAATGCCAATGAACCGGTTTCAAACCGATATCTGGAGGTTAATGCAAGTGATAGTGATGAGTCTGATGGGGCAAAGCGCGTTGTTAAATCTGCCAAAGACAAGCGGTTTGATGAACTGTCTGCAACTGTTCACCAGATGAAGAATGCCATGAATATCAATGACTGGGTTAGCTTGCAGGAGAGCTTTGACAAGATAAACAAGCAACTTGAGAAGGTCATGCGCGTTACAGAGTCTGTGAAAGTACCTGTTCTGTACATTAAGGCACTTGTAATGTTGGAGGACTTTTTGGGTCAGGCTTTGGCAAACAAGGATGCAAAAAAGAAGATGAGTAGTAGTAATGCCAAGGCCTTGAACTCAATGAAGCAGAAACTGAAGAAGAATAATAAGCAGTATGAGGATTTGATTAATAAGGAAAGGGAGAATCCTGAGCAGAGTGAGGACGAAAAGAGTGCAGAAGAGGAGTCGGATGATGAGGAAGTAACAGATTCTGAAATTGATCCTACTGAAGTTGTACCTTCAGGTTCTGATACTGATGATGATGTGGATATAGACGATGGTGGGGATAACCAAACTGAGGAGGGCTGGCAGAAGCAGATGAGCAAGAAAGATAAACTCATGGATAAGCAATTCATGAAGGATCCTAGTGAGATCACGTGGGATACAGTGAACAAGAAATTTAAGGAGGTGGTGGCTGCTCGTGGAAGGAAGGGAACTGGGAGGTTTGAGCAGGTTGAGCAACTTACCTTCTTGACCAAGGTTGCGAAGACCCCTGCACAGAAGCTGGAGATCTTCTTCAGCGTTGTTTCTGCTCAGTTTGATGTGAATCCTGGTCTCAACGGTCACATGCCAATAAATGTATGGAAGAAGTGTGTGCAGAATATGCAAGTTATACTTGATATTCTTGTGCAGTACCCCAACATTACAGTTGATGATATGGTGGAGCCCGATGAGAATGAATCCCAGAAAGGACCAGATTATGATGGGACCATTAGGGTCTGGGGAAACTTGGTGGCCTTTTTAGAGAGGATAGATACTGAGTTCTTCAAGAGCTTGCAGTGCATTGATCCTCACACTCGTGAGTACATTGAAAGACTTAGGGATGAGCCTATGTTCTTGGTTCTTGCTCAAAATGTTCAAGAATATTTAGAACGAGTCAAGGATTTCAAAGCTGCCGCAAAGGTAGCCCTAAGGCGTGTTGAACTTATCTATTATAAGCCACAAGAAGTTTATGATGCCATGAGAAAATTGGCTGAGCAGACAGGAGAAGATGGTGAAGGCCTGGAGCCTAAACCGGAGGAAACTCGTGGTCCATCTGCATTTATTGTAGTGCCTGAGCTTGTTCCCCGCAAACCTACCTTTTCAGAGAGTAGCAGGACCATGATGGATATTCTGGTTTCCCTCATTTACAAGTATGGGGATGAGAGGACTAAAGCTCGTGCAATGCTATGTGATATCTATCACCATGCTCTGCTGGATGAGTTTTCCACTTCCCGTGACTTGCTGCTAATGAGTCACCTGCAGGATAACATTCAGCATATGGACATCTCGACCCAGATACTTTATAATAGAGCCATGGCACAACTTGGTCTCTGTGCATTTCGGCTTGGATTGATCACTGAAGGACATAGCTGCCTTTCTGAACTATATTCTGGTGGAAGAGTAAAGGAGTTGCTTGCACAAGGTGTCTCACAAAGTAGATATCATGAGAAAACTCCAGAACAGGAAAGGTTGGAGAGGAGACGACAAATGCCTTACCATATGCACATTAACCCTGAGCTCTTGGAGGCAGTGCATCTGATATGTGCCATGCTGCTGGAAGTGCCTAACATGGCAGCTAACATCTTTGATGCAAAGCGAAGATTGATTAGTAAGACATTCAGGCGGTTGCTTGAGATTAGTGAGAAGCAAACTTTCACAGGGCCCCCTGAAAATGTCAGGGACCATGTAATGGCAGCAACCAGGGCCCTTGTCAAGGGTGACTTCCAAAAGGCTTTTGATGTCATCAATTCTCTTGATGTTTGGAAGCTTCTGAAGAATCGTGAGAATGTTCTAGAGATGCTCAAGTGTAAGATCAAGGAAGAGGCTCTGAGGACCTACCTCTTTACCTTTTCCTCGTCCTATAAGACTCTTAGCTTGGAACAAGTTGCCATGATGTTTGACCTTTCAGAGGCTCAGACTCATAGCATTGTGAGCAAGATGATGATCAACGAAGAGCTCCTTGCAAGCTGGGACCAACCAACACGTTGCATTGTTTTCCATGACGTAGCCCACAGTAGGTTGCAGGCCTTAGCTTTCCAGTTGACTGAGAAGTTGTCAATCCTTGCAGAAAGCAATGAAAGAGCTACAGAAGCAAGGATAGGTGGCGGTGGATTAGATCTGCCTCAAAAGCGTAGAGACAACCAGGACTATGCTGCTGGGGGTGGTGGCAGATGGCAAGACAACAATCTGTCTTTCAATCAAAGGCAAGGAGGTGGCTCTGGGCGTACAGGATATAACAGCGGAGGGAGACAATATGGCCAAGCTGCTGGAGGCGGGTATTCTAGAGACCGCACAGGTCAGTCCAGGGGAACTGGTCAGAACACTCGATATCAAGATGCTGCATATGCTGGCTCTGGGAGGACTGGCTATCAGACAGCTGCAAGGGGATCTCAGGATACTTCATCTCGCATGGTCAATCTACATAGGGGGCTTCGCGCCTAA

Protein Analysis

930

Amino Acids

105.43

Weight (kDa)

5.41

Isoelectric Point (pI)

48.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3c_N PF05470 47 - 648 2.7e-246 Eukaryotic translation initiation factor 3 subunit 8 N-terminus
PCI PF01399 713 - 785 8e-13 PCI domain
EIF3CL_C PF26569 792 - 816 1.4e-08 EIF3CL-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1305, 1656
AarI CACCTGC 1 cut(s) 1617
Acc36I ACCTGC 2 cut(s) 811, 1617
AccB7I CCANNNNNTGG 1 cut(s) 2041
AccII CGCG 3 cut(s) 171, 315, 2787
AciI CCGC 8 cut(s) 196, 1266, 1438, 1975, 2457, 2592, 2625, 2641
AclWI GGATC 5 cut(s) 584, 725, 738, 1151, 2746
AcoI YGGCCR 1 cut(s) 2608
AcsI RAATTY 1 cut(s) 767
AcuI CTGAAG 6 cut(s) 485, 594, 618, 871, 1731, 2144
AcvI CACGTG 1 cut(s) 747
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 1775
AfaI GTAC 6 cut(s) 336, 347, 606, 1004, 1175, 2578
AfiI CCNNNNNNNGG 6 cut(s) 124, 667, 2041, 2065, 2260, 2367
AflIII ACRYGT 1 cut(s) 2333
AgeI ACCGGT 1 cut(s) 106
AgsI TTSAA 8 cut(s) 114, 445, 1138, 1181, 1229, 1258, 1292, 2548
AjnI CCWGG 5 cut(s) 919, 1371, 2051, 2493, 2654
AleI CACNNNNGTG 1 cut(s) 1167
Alw21I GWGCWC 2 cut(s) 1872, 2310
Alw26I GTCTC 8 cut(s) 12, 929, 1685, 1783, 1825, 2481, 2593, 2631
AlwI GGATC 5 cut(s) 584, 725, 738, 1151, 2746
AlwNI CAGNNNCTG 5 cut(s) 326, 463, 581, 617, 874
AoxI GGCC 7 cut(s) 438, 1104, 1369, 2012, 2055, 2376, 2608
ApaI GGGCCC 2 cut(s) 2016, 2059
ApoI RAATTY 1 cut(s) 767
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
AseI ATTAAT 1 cut(s) 498
AsiGI ACCGGT 1 cut(s) 106
Asp700I GAANNNNTTC 1 cut(s) 34
AspLEI GCGC 3 cut(s) 171, 315, 2789
AsuHPI GGTGA 7 cut(s) 80, 101, 215, 1376, 1544, 1598, 2081
AvaII GGWCC 8 cut(s) 18, 1061, 1077, 1400, 1467, 2032, 2184, 2323
AxyI CCTNAGG 1 cut(s) 1280
BaeGI GKGCMC 2 cut(s) 2016, 2059
BalI TGGCCA 1 cut(s) 2610
BamHI GGATCC 1 cut(s) 730
BanII GRGCYC 5 cut(s) 1038, 1872, 2016, 2059, 2310
BauI CACGAG 4 cut(s) 789, 1167, 1395, 1527
BbrPI CACGTG 1 cut(s) 747
BbsI GAAGAC 1 cut(s) 863
Bbv12I GWGCWC 2 cut(s) 1872, 2310
BccI CCATC 8 cut(s) 59, 152, 641, 1067, 1355, 1411, 1468, 2517
BcgI CGANNNNNNTGC 2 cut(s) 524, 558
BciT130I CCWGG 5 cut(s) 921, 1373, 2053, 2495, 2656
BciVI GTATCC 2 cut(s) 745, 2740
BclI TGATCA 2 cut(s) 1704, 2295
BcoDI GTCTC 8 cut(s) 12, 929, 1685, 1783, 1825, 2481, 2593, 2631
BfaI CTAG 3 cut(s) 735, 2144, 2634
BfmI CTRYAG 2 cut(s) 1610, 2436
BfuAI ACCTGC 2 cut(s) 811, 1617
BfuI GTATCC 2 cut(s) 745, 2740
BglII AGATCT 2 cut(s) 879, 2467
BlpI GCTNAGC 1 cut(s) 1344
Bme1390I CCNGG 5 cut(s) 921, 1373, 2053, 2495, 2656
Bme18I GGWCC 8 cut(s) 18, 1061, 1077, 1400, 1467, 2032, 2184, 2323
BmrFI CCNGG 5 cut(s) 921, 1373, 2053, 2495, 2656
BmrI ACTGGG 2 cut(s) 265, 816
BmsI GCATC 6 cut(s) 394, 1315, 1894, 1930, 2139, 2677
BmuI ACTGGG 2 cut(s) 265, 816
BpiI GAAGAC 1 cut(s) 863
BpmI CTGGAG 5 cut(s) 146, 896, 1394, 1791, 2640
Bpu10I CCTNAGC 4 cut(s) 519, 1425, 1866, 2380
Bpu1102I GCTNAGC 1 cut(s) 1344
BpuEI CTTGAG 3 cut(s) 320, 2003, 2138
BsaAI YACGTR 1 cut(s) 747
BsaBI GATNNNNATC 3 cut(s) 915, 1548, 2294
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 3 cut(s) 929, 1685, 2631
BsaJI CCNNGG 6 cut(s) 39, 435, 846, 1665, 2052, 2655
BsaWI WCCGGW 2 cut(s) 106, 1384
BsaXI ACNNNNNCTCC 2 cut(s) 41, 71
Bsc4I CCNNNNNNNGG 6 cut(s) 124, 667, 2041, 2065, 2260, 2367
Bse118I RCCGGY 1 cut(s) 106
Bse1I ACTGG 5 cut(s) 260, 811, 2389, 2668, 2719
Bse21I CCTNAGG 1 cut(s) 1280
Bse3DI GCAATG 2 cut(s) 1539, 2431
Bse8I GATNNNNATC 3 cut(s) 915, 1548, 2294
BseBI CCWGG 5 cut(s) 921, 1373, 2053, 2495, 2656
BseDI CCNNGG 6 cut(s) 39, 435, 846, 1665, 2052, 2655
BseGI GGATG 6 cut(s) 49, 409, 565, 1198, 1516, 1573
BseJI GATNNNNATC 3 cut(s) 915, 1548, 2294
BseLI CCNNNNNNNGG 6 cut(s) 124, 667, 2041, 2065, 2260, 2367
BseMI GCAATG 2 cut(s) 1539, 2431
BseNI ACTGG 5 cut(s) 260, 811, 2389, 2668, 2719
BseRI GAGGAG 4 cut(s) 62, 566, 683, 1843
BseSI GKGCMC 2 cut(s) 2016, 2059
BseYI CCCAGC 2 cut(s) 2319, 2507
BsgI GTGCAG 4 cut(s) 564, 849, 986, 1019
Bsh1236I CGCG 3 cut(s) 171, 315, 2787
BshFI GGCC 7 cut(s) 440, 1106, 1371, 2014, 2057, 2378, 2610
BshTI ACCGGT 1 cut(s) 106
BsiHKAI GWGCWC 2 cut(s) 1872, 2310
BsiSI CCGG 2 cut(s) 107, 1385
BslFI GGGAC 3 cut(s) 1090, 2045, 2336
BslI CCNNNNNNNGG 6 cut(s) 124, 667, 2041, 2065, 2260, 2367
BsmAI GTCTC 8 cut(s) 12, 929, 1685, 1783, 1825, 2481, 2593, 2631
BsmBI CGTCTC 2 cut(s) 12, 1825
BsmFI GGGAC 3 cut(s) 1090, 2045, 2336
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 7 cut(s) 440, 1106, 1371, 2014, 2057, 2378, 2610
Bso31I GGTCTC 3 cut(s) 929, 1685, 2631
Bsp120I GGGCCC 2 cut(s) 2012, 2055
Bsp1286I GDGCHC 5 cut(s) 1038, 1872, 2016, 2059, 2310
Bsp1407I TGTACA 1 cut(s) 345
Bsp1720I GCTNAGC 1 cut(s) 1344
Bsp19I CCATGG 1 cut(s) 1665
BspACI CCGC 8 cut(s) 196, 1266, 1438, 1975, 2457, 2592, 2625, 2641
BspANI GGCC 7 cut(s) 440, 1106, 1371, 2014, 2057, 2378, 2610
BspFNI CGCG 3 cut(s) 171, 315, 2787
BspHI TCATGA 2 cut(s) 723, 1795
BspMAI CTGCAG 1 cut(s) 1614
BspMI ACCTGC 2 cut(s) 811, 1617
BspPI GGATC 5 cut(s) 584, 725, 738, 1151, 2746
BspQI GCTCTTC 1 cut(s) 2298
BspTNI GGTCTC 3 cut(s) 929, 1685, 2631
BsrDI GCAATG 2 cut(s) 1539, 2431
BsrFI RCCGGY 1 cut(s) 106
BsrGI TGTACA 1 cut(s) 345
BsrI ACTGG 5 cut(s) 260, 811, 2389, 2668, 2719
BssAI RCCGGY 1 cut(s) 106
BssECI CCNNGG 6 cut(s) 39, 435, 846, 1665, 2052, 2655
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 4 cut(s) 789, 1167, 1395, 1527
BssT1I CCWWGG 3 cut(s) 435, 846, 1665
Bst2BI CACGAG 4 cut(s) 789, 1167, 1395, 1527
Bst2UI CCWGG 5 cut(s) 921, 1373, 2053, 2495, 2656
Bst4CI ACNGT 6 cut(s) 210, 220, 757, 932, 1018, 2366
Bst6I CTCTTC 4 cut(s) 543, 1744, 2166, 2298
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 973
BstAUI TGTACA 1 cut(s) 345
BstBAI YACGTR 1 cut(s) 747
BstC8I GCNNGC 7 cut(s) 266, 677, 1145, 1767, 2317, 2376, 2701
BstDSI CCRYGG 1 cut(s) 1665
BstENI CCTNNNNNAGG 2 cut(s) 2063, 2258
BstF5I GGATG 6 cut(s) 49, 409, 565, 1198, 1516, 1573
BstFNI CGCG 3 cut(s) 171, 315, 2787
BstHHI GCGC 3 cut(s) 171, 315, 2789
BstMAI GTCTC 8 cut(s) 12, 929, 1685, 1783, 1825, 2481, 2593, 2631
BstNI CCWGG 5 cut(s) 921, 1373, 2053, 2495, 2656
BstNSI RCATGY 1 cut(s) 940
BstSCI CCNGG 5 cut(s) 919, 1371, 2051, 2493, 2654
BstSFI CTRYAG 2 cut(s) 1610, 2436
BstSLI GKGCMC 2 cut(s) 2016, 2059
BstUI CGCG 3 cut(s) 171, 315, 2787
BstV2I GAAGAC 1 cut(s) 863
BstX2I RGATCY 4 cut(s) 730, 879, 2467, 2738
BstXI CCANNNNNNTGG 2 cut(s) 1906, 2618
BstYI RGATCY 4 cut(s) 730, 879, 2467, 2738
Bsu36I CCTNAGG 1 cut(s) 1280
BsuI GTATCC 2 cut(s) 745, 2740
BsuRI GGCC 7 cut(s) 440, 1106, 1371, 2014, 2057, 2378, 2610
BtgI CCRYGG 1 cut(s) 1665
BtsCI GGATG 6 cut(s) 49, 409, 565, 1198, 1516, 1573
BtsI GCAGTG 2 cut(s) 1154, 1887
BtsIMutI CAGTG 4 cut(s) 762, 1154, 1707, 1887
BveI ACCTGC 2 cut(s) 811, 1617
Cac8I GCNNGC 7 cut(s) 266, 677, 1145, 1767, 2317, 2376, 2701
CaiI CAGNNNCTG 5 cut(s) 326, 463, 581, 617, 874
CciI TCATGA 2 cut(s) 723, 1795
CfoI GCGC 3 cut(s) 171, 315, 2789
Cfr10I RCCGGY 1 cut(s) 106
Csp6I GTAC 6 cut(s) 335, 346, 605, 1003, 1174, 2577
CspAI ACCGGT 1 cut(s) 106
CviQI GTAC 6 cut(s) 335, 346, 605, 1003, 1174, 2577
DraIII CACNNNGTG 1 cut(s) 1775
EaeI YGGCCR 1 cut(s) 2608
Eam1104I CTCTTC 4 cut(s) 543, 1744, 2166, 2298
EarI CTCTTC 4 cut(s) 543, 1744, 2166, 2298
Ecl136II GAGCTC 2 cut(s) 1870, 2308
Eco130I CCWWGG 3 cut(s) 435, 846, 1665
Eco147I AGGCCT 3 cut(s) 440, 1371, 2378
Eco24I GRGCYC 5 cut(s) 1038, 1872, 2016, 2059, 2310
Eco31I GGTCTC 3 cut(s) 929, 1685, 2631
Eco32I GATATC 4 cut(s) 122, 1546, 1793, 2681
Eco47I GGWCC 8 cut(s) 18, 1061, 1077, 1400, 1467, 2032, 2184, 2323
Eco53kI GAGCTC 2 cut(s) 1870, 2308
Eco57I CTGAAG 6 cut(s) 485, 594, 618, 871, 1731, 2144
Eco72I CACGTG 1 cut(s) 747
Eco81I CCTNAGG 1 cut(s) 1280
EcoICRI GAGCTC 2 cut(s) 1870, 2308
EcoNI CCTNNNNNAGG 2 cut(s) 2063, 2258
EcoO109I RGGNCCY 5 cut(s) 2012, 2013, 2055, 2056, 2184
EcoRII CCWGG 5 cut(s) 919, 1371, 2051, 2493, 2654
EcoRV GATATC 4 cut(s) 122, 1546, 1793, 2681
EcoT14I CCWWGG 3 cut(s) 435, 846, 1665
EcoT38I GRGCYC 5 cut(s) 1038, 1872, 2016, 2059, 2310
ErhI CCWWGG 3 cut(s) 435, 846, 1665
Esp3I CGTCTC 2 cut(s) 12, 1825
FalI AAGNNNNNCTT 6 cut(s) 969, 1001, 2057, 2089, 2295, 2327
FaqI GGGAC 3 cut(s) 1090, 2045, 2336
FauI CCCGC 2 cut(s) 1445, 2618
FauNDI CATATG 3 cut(s) 1629, 1851, 2695
FbaI TGATCA 2 cut(s) 1704, 2295
FokI GGATG 6 cut(s) 56, 416, 572, 1205, 1523, 1580
FriOI GRGCYC 5 cut(s) 1038, 1872, 2016, 2059, 2310
FspBI CTAG 3 cut(s) 735, 2144, 2634
GlaI GCGC 3 cut(s) 170, 314, 2788
GsaI CCCAGC 2 cut(s) 2323, 2511
GsuI CTGGAG 5 cut(s) 146, 896, 1394, 1791, 2640
HaeIII GGCC 7 cut(s) 440, 1106, 1371, 2014, 2057, 2378, 2610
HapII CCGG 2 cut(s) 107, 1385
HhaI GCGC 3 cut(s) 171, 315, 2789
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 169, 313, 2787
HinP1I GCGC 3 cut(s) 169, 313, 2787
HincII GTYRAC 1 cut(s) 2394
HindII GTYRAC 1 cut(s) 2394
HindIII AAGCTT 1 cut(s) 2117
HpaII CCGG 2 cut(s) 107, 1385
HphI GGTGA 7 cut(s) 80, 101, 215, 1376, 1544, 1598, 2081
Hpy166II GTNNAC 3 cut(s) 223, 760, 2394
Hpy8I GTNNAC 3 cut(s) 223, 760, 2394
HpyAV CCTTC 8 cut(s) 298, 618, 721, 789, 793, 847, 1361, 1706
HpyCH4III ACNGT 6 cut(s) 210, 220, 757, 932, 1018, 2366
HpyCH4IV ACGT 3 cut(s) 746, 2335, 2355
HpySE526I ACGT 3 cut(s) 746, 2335, 2355
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 169, 313, 2787
Ksp22I TGATCA 2 cut(s) 1704, 2295
LguI GCTCTTC 1 cut(s) 2298
LmnI GCTCC 3 cut(s) 1033, 1375, 2313
LweI GCATC 6 cut(s) 394, 1315, 1894, 1930, 2139, 2677
MaeI CTAG 3 cut(s) 735, 2144, 2634
MaeII ACGT 3 cut(s) 746, 2335, 2355
MaeIII GTNAC 7 cut(s) 89, 316, 571, 932, 1586, 1604, 2069
MflI RGATCY 4 cut(s) 730, 879, 2467, 2738
MhlI GDGCHC 5 cut(s) 1038, 1872, 2016, 2059, 2310
MlsI TGGCCA 1 cut(s) 2610
MluCI AATT 5 cut(s) 585, 719, 767, 1337, 2098
MluNI TGGCCA 1 cut(s) 2610
MlyI GAGTC 7 cut(s) 161, 332, 563, 1254, 1612, 2212, 2263
MmeI TCCRAC 3 cut(s) 348, 537, 1803
Mox20I TGGCCA 1 cut(s) 2610
MroXI GAANNNNTTC 1 cut(s) 34
MscI TGGCCA 1 cut(s) 2610
MseI TTAA 6 cut(s) 132, 177, 351, 498, 771, 1860
MslI CAYNNNNRTG 1 cut(s) 1167
Msp20I TGGCCA 1 cut(s) 2610
MspA1I CMGCKG 2 cut(s) 2592, 2729
MspI CCGG 2 cut(s) 107, 1385
MspR9I CCNGG 5 cut(s) 921, 1373, 2053, 2495, 2656
Mva1269I GAATGC 1 cut(s) 241
MvaI CCWGG 5 cut(s) 921, 1373, 2053, 2495, 2656
MvnI CGCG 3 cut(s) 171, 315, 2787
NcoI CCATGG 1 cut(s) 1665
NdeI CATATG 3 cut(s) 1629, 1851, 2695
NmuCI GTSAC 5 cut(s) 89, 932, 1586, 1604, 2069
NspI RCATGY 1 cut(s) 940
OliI CACNNNNGTG 1 cut(s) 1167
PagI TCATGA 2 cut(s) 723, 1795
PaqCI CACCTGC 1 cut(s) 1617
PceI AGGCCT 3 cut(s) 440, 1371, 2378
PciSI GCTCTTC 1 cut(s) 2298
PctI GAATGC 1 cut(s) 241
PdmI GAANNNNTTC 1 cut(s) 34
PfeI GAWTC 6 cut(s) 35, 514, 578, 916, 1049, 2128
PflMI CCANNNNNTGG 1 cut(s) 2041
PinAI ACCGGT 1 cut(s) 106
PleI GAGTC 7 cut(s) 160, 331, 562, 1253, 1611, 2212, 2263
PmaCI CACGTG 1 cut(s) 747
PmlI CACGTG 1 cut(s) 747
PpsI GAGTC 7 cut(s) 160, 331, 562, 1253, 1611, 2212, 2263
Ppu21I YACGTR 1 cut(s) 747
PpuMI RGGWCCY 1 cut(s) 2184
PshBI ATTAAT 1 cut(s) 498
PsiI TTATAA 2 cut(s) 1305, 1656
Psp124BI GAGCTC 2 cut(s) 1872, 2310
Psp5II RGGWCCY 1 cut(s) 2184
Psp6I CCWGG 5 cut(s) 919, 1371, 2051, 2493, 2654
PspCI CACGTG 1 cut(s) 747
PspFI CCCAGC 2 cut(s) 2319, 2507
PspGI CCWGG 5 cut(s) 919, 1371, 2051, 2493, 2654
PspOMI GGGCCC 2 cut(s) 2012, 2055
PspPPI RGGWCCY 1 cut(s) 2184
PstI CTGCAG 1 cut(s) 1614
PstNI CAGNNNCTG 5 cut(s) 326, 463, 581, 617, 874
PsuI RGATCY 4 cut(s) 730, 879, 2467, 2738
PvuII CAGCTG 1 cut(s) 2729
RsaI GTAC 6 cut(s) 336, 347, 606, 1004, 1175, 2578
RsaNI GTAC 6 cut(s) 335, 346, 605, 1003, 1174, 2577
RseI CAYNNNNRTG 1 cut(s) 1167
SacI GAGCTC 2 cut(s) 1872, 2310
SapI GCTCTTC 1 cut(s) 2298
SaqAI TTAA 6 cut(s) 132, 177, 351, 498, 771, 1860
SbfI CCTGCAGG 1 cut(s) 1614
SchI GAGTC 7 cut(s) 161, 332, 563, 1254, 1612, 2212, 2263
ScrFI CCNGG 5 cut(s) 921, 1373, 2053, 2495, 2656
SdaI CCTGCAGG 1 cut(s) 1614
SduI GDGCHC 5 cut(s) 1038, 1872, 2016, 2059, 2310
SfaNI GCATC 6 cut(s) 394, 1315, 1894, 1930, 2139, 2677
SfcI CTRYAG 2 cut(s) 1610, 2436
SinI GGWCC 8 cut(s) 18, 1061, 1077, 1400, 1467, 2032, 2184, 2323
SmiMI CAYNNNNRTG 1 cut(s) 1167
SmlI CTYRAG 3 cut(s) 299, 1982, 2153
SmoI CTYRAG 3 cut(s) 299, 1982, 2153
Sse8387I CCTGCAGG 1 cut(s) 1614
Sse9I AATT 5 cut(s) 585, 719, 767, 1337, 2098
SseBI AGGCCT 3 cut(s) 440, 1371, 2378
SsiI CCGC 8 cut(s) 196, 1266, 1438, 1975, 2457, 2592, 2625, 2641
SspI AATATT 1 cut(s) 1235
SspMI CTAG 3 cut(s) 735, 2144, 2634
SstI GAGCTC 2 cut(s) 1872, 2310
StuI AGGCCT 3 cut(s) 440, 1371, 2378
StyD4I CCNGG 5 cut(s) 919, 1371, 2051, 2493, 2654
StyI CCWWGG 3 cut(s) 435, 846, 1665
TaaI ACNGT 6 cut(s) 210, 220, 757, 932, 1018, 2366
TaiI ACGT 3 cut(s) 749, 2338, 2358
TaqI TCGA 3 cut(s) 10, 1640, 2677
TasI AATT 5 cut(s) 585, 719, 767, 1337, 2098
TatI WGTACW 2 cut(s) 345, 1173
TauI GCSGC 1 cut(s) 1268
TfiI GAWTC 6 cut(s) 35, 514, 578, 916, 1049, 2128
Tru1I TTAA 6 cut(s) 132, 177, 351, 498, 771, 1860
Tru9I TTAA 6 cut(s) 132, 177, 351, 498, 771, 1860
TscAI CASTG 4 cut(s) 762, 1154, 1714, 1887
TseFI GTSAC 5 cut(s) 89, 932, 1586, 1604, 2069
Tsp45I GTSAC 5 cut(s) 89, 932, 1586, 1604, 2069
TspRI CASTG 4 cut(s) 762, 1154, 1714, 1887
Van91I CCANNNNNTGG 1 cut(s) 2041
VpaK11BI GGWCC 8 cut(s) 18, 1061, 1077, 1400, 1467, 2032, 2184, 2323
VspI ATTAAT 1 cut(s) 498
XagI CCTNNNNNAGG 2 cut(s) 2063, 2258
XapI RAATTY 1 cut(s) 767
XbaI TCTAGA 2 cut(s) 2143, 2633
XceI RCATGY 1 cut(s) 940
XcmI CCANNNNNNNNNTGG 2 cut(s) 948, 1336
XmnI GAANNNNTTC 1 cut(s) 34
XspI CTAG 3 cut(s) 735, 2144, 2634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.