Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0013727.1

Orthogroup ID

OG0000938

Physical Location & Seq

Genomic Coordinates Reverse (-)

15215 .. 18303

Gene Structure 3089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0013727.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

atggcttcgacttcgaaattctggggccgccagagtgatcaaagtgacagcgatagcgattcagaagatgagcctgtaatcacagatgaggagacgactagcattaagaaaatcaaaaacaaatacgaaattgaaagtgatgatgaggaaagctctgatgacgaaaagcgtgtggttaagtcagggaaagctaagcgattcgaggagatgtgtgctactgttgacaagataaacaaggcaaagaacataaacgattgggtgagcttgcaggactcgtttgacaagatgaataaacagcttgagaaggtgctgcgcgtagcccggtctgcaaaagtaccaactctgtacatcagagcgcttgttttgttggaggagtatgtggccgaggctctagcaaataaggatgctaagaagaagatgagtagcaccaatgccaaggccttgaactcgatgaaacagaaactcaagaagaacaataaggaatatgaggatttgattcagaagtacaaggagaatcctacagaagaagagctttcggaagaggaagaatttgaaacaaattctgaaattgaagttcctaaagatgttggatatggggaggatgaggaaaaggaggatggttgggagagaaaatctagtaagaggagtaagcttgtcctggataagcagcagttcatgagtactgaccctcgtcaggttacgtgggatacagtcaacaagaaattcaaagaggttgtggctgttaggggaaggaagggaacgagatggtttgagctagttgagcagcttattttcttggcaaaggttgctaagactcctgcgcagaagcttgagatttttctcagtattgtttatgctcaatttgatgctggtctccatgggcacatgcctacgcatgtgtggaaaaattgtgtgcagaatatgcttgttattcttgatattctggtgcaatatcccaacatccgtgtcgttgacaaggcggagatcgatgataatggatctcagcatggatctgactataatgggacaatcagggtcagtggaaacttggggggttttgtggaaagaatagatgatgattttttcaagagcttacagagtctagaccctcacaccactgagtacattgaaagactcagagatgagcctatgcttttcgttcttgctcagaatgttcaagaatatttggagcaagttggagatttcaaagcagctgcaaaggtagccctaaggcaggttgaactccttcactacaagcctcaagaagtctataatgccatgagaaaactagctgagcaaacagaaagtggtgataatggagaagtgactgaagtccatgacgctacatctgcatttcttgcatctcctgagctcgtacctcggggacctgcgtttttggagagtagtagggccctcatggatattctcgtctctttcatatacaaatatggagatgataggactaaagctcgtgcaatgctttgtgatatttaccaccatgctctccaggatgatttctctactgcccgtaacttgctgctaatgagtcacctgcaagacagtattcaccatatggacatttcatccaaaatccttttcaatagggctatggcacagcttggtctgtgtgcatttcgtaatggactaattactgaaggacatagctgcctttctgaactatattcaggtggaaaagtgaaggagttgctcggacaaggtgtgtcccgaagtagatatcatgagaaaacccctgaacaggggagtcttgagagaccctatcatatgcacatcaaccttgagctcctagaggcagtgcatttgatatgtgccatgctgctggaagtgcctaatatggcagcagccagcaccaatacaaaacgcagggtgattagtaagacattccggtggttgcttgagaagcaaacattcataggacctcctgaaactgtcagagaccatgtaattgcagctacaagggccctcttcaaaggtgacttccaaaaggcctttgatgtcatcagttctcttcatgtctggaagctcctccggaatcgtgagaatgttctggagatgctcaatgctaatatcaaggaggcggctctgaggacctaccttttcacctactatccgtcctataaatctttaagcattgagcaagtgaccaacatgtttgacctctcagaggccgagactcatagcattgttagaaagatgatcatgaacgaagagctccatgctcgtttggaccagcaaacacgttgcattgtcttccccgataatgaccgcactagtttggtgaatatactcaagctggttgacaggctgtcagtcctctgcgaaaataatgaaaagttagcagagctgaggataggtggtggtgtattaagtctgccttcagggaggccgagttgctatcaaactcttcaatctcattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005852 GO:0006412 GO:0006413 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0019538 GO:0031369 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

PCI eIF-3c_N

Protein Analysis

811

Amino Acids

92.68

Weight (kDa)

5.81

Isoelectric Point (pI)

50.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000938)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56150 AT3G56150
fragaria_vesca	FvH4_5g35510 FvH4_5g35510 FvH4_5g35510 FvH4_5g35510 FvH4_6g21351 FvH4_6g21351 FvH4_6g21360 FvH4_6g21360 FvH4_6g21360
malus_domestica	MD05G1153900.v1.1 MD08G1196100.v1.1 MD12G1050600.v1.1 MD15G1383900.v1.1
prunus_persica	Prupe.1G530000_v2.0.a1 Prupe.7G086100_v2.0.a1 Prupe.7G086100_v2.0.a1
pyrus_communis	pycom08g16830 pycom12g04510 pycom15g34350
rosa_chinensis	RchiOBHm_Chr3g0477961 RchiOBHm_Chr3g0477971 RchiOBHm_Chr7g0236891
rosa_laevigata	RLG00000001050 RLG00000023675 RLG00000023676
rosa_multiflora	Rmu_co8284977.1_g000001 Rmu_co8517169.1_g000001 Rmu_sc0005991.1_g000006 Rmu_sc0010895.1_g000001 Rmu_sc0013727.1_g000003 Rmu_sc0028822.1_g000002
rosa_roxburghii	Rroxscaffold_1G00032460 Rroxscaffold_1G00037610 Rroxscaffold_3G00224710 Rroxscaffold_6G00403560 Rroxscaffold_6G00403570
rosa_rugosa	Rorug03G0164400 Rorug03G0164500 Rorug03G0164600 Rorug03G0164700 Rorug03G0164800 Rorug03G0164900 Rorug07G0300800
rosa_samantha	Rh2AG276900 Rh3AG215100 Rh3AG215200 Rh3BG248700 Rh3BG248800 Rh3CG242600 Rh3CG242700 Rh3DG242000 Rh3DG242200 Rh3DG242300 Rh7AG455600 Rh7BG427000 Rh7CG474300 Rh7DG443500
rosa_wichuraiana	Rw0G010140 Rw0G010150 Rw3G019380 Rw3G019390 Rw7G037820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1560
Acc16I	TGCGCA	1 cut(s)	822
Acc36I	ACCTGC	3 cut(s)	1225, 1396, 1560
AccII	CGCG	1 cut(s)	315
AccIII	TCCGGA	1 cut(s)	2046
AciI	CCGC	4 cut(s)	28, 980, 2096, 2284
AclWI	GGATC	2 cut(s)	1006, 1018
AcoI	YGGCCR	1 cut(s)	381
AcsI	RAATTY	4 cut(s)	17, 548, 559, 722
AcuI	CTGAAG	3 cut(s)	1350, 1674, 2379
AfaI	GTAC	6 cut(s)	336, 347, 506, 682, 1124, 1377
AfeI	AGCGCT	1 cut(s)	357
AfiI	CCNNNNNNNGG	5 cut(s)	694, 1234, 1756, 1757, 2182
AflIII	ACRYGT	2 cut(s)	2166, 2255
AhdI	GACNNNNNGTC	1 cut(s)	2323
AhlI	ACTAGT	1 cut(s)	2288
AjnI	CCWGG	2 cut(s)	657, 1506
AjuI	GAANNNNNNNTTGG	2 cut(s)	1580, 1612
Alw21I	GWGCWC	3 cut(s)	1374, 1803, 2232
Alw26I	GTCTC	6 cut(s)	86, 878, 1435, 1765, 1947, 2183
AlwI	GGATC	2 cut(s)	1006, 1018
Ama87I	CYCGRG	1 cut(s)	1380
Aor13HI	TCCGGA	1 cut(s)	2046
Aor51HI	AGCGCT	1 cut(s)	357
AoxI	GGCC	8 cut(s)	25, 381, 438, 1410, 1977, 2004, 2184, 2402
ApaI	GGGCCC	2 cut(s)	1414, 1981
ApoI	RAATTY	4 cut(s)	17, 548, 559, 722
Asp700I	GAANNNNTTC	1 cut(s)	1245
AspLEI	GCGC	3 cut(s)	315, 358, 823
AspS9I	GGNCC	9 cut(s)	25, 1385, 1410, 1411, 1934, 1977, 1978, 2106, 2245
AsuC2I	CCSGG	1 cut(s)	322
AsuHPI	GGTGA	8 cut(s)	271, 1322, 1541, 1559, 1897, 2003, 2110, 2308
AsuII	TTCGAA	1 cut(s)	14
AvaI	CYCGRG	1 cut(s)	1380
AvaII	GGWCC	4 cut(s)	1385, 1934, 2106, 2245
AxyI	CCTNAGG	1 cut(s)	1229
BaeGI	GKGCMC	3 cut(s)	885, 1414, 1981
BanII	GRGCYC	5 cut(s)	1374, 1414, 1803, 1981, 2232
BauI	CACGAG	1 cut(s)	1470
BbsI	GAAGAC	1 cut(s)	2260
Bbv12I	GWGCWC	3 cut(s)	1374, 1803, 2232
BbvCI	CCTCAGC	1 cut(s)	2363
BccI	CCATC	2 cut(s)	611, 759
BciT130I	CCWGG	2 cut(s)	659, 1508
BciVI	GTATCC	1 cut(s)	700
BclI	TGATCA	2 cut(s)	37, 2214
BcnI	CCSGG	1 cut(s)	322
BcoDI	GTCTC	6 cut(s)	86, 878, 1435, 1765, 1947, 2183
BcuI	ACTAGT	1 cut(s)	2288
BfaI	CTAG	8 cut(s)	99, 392, 636, 776, 1103, 1289, 1805, 2289
BfmI	CTRYAG	1 cut(s)	519
BfoI	RGCGCY	1 cut(s)	359
BfuAI	ACCTGC	3 cut(s)	1225, 1396, 1560
BfuI	GTATCC	1 cut(s)	700
BlpI	GCTNAGC	2 cut(s)	192, 1293
BmcAI	AGTACT	1 cut(s)	682
Bme1390I	CCNGG	3 cut(s)	322, 659, 1508
Bme18I	GGWCC	4 cut(s)	1385, 1934, 2106, 2245
BmeRI	GACNNNNNGTC	1 cut(s)	2323
BmeT110I	CYCGRG	1 cut(s)	1380
BmgT120I	GGNCC	9 cut(s)	25, 1385, 1410, 1411, 1934, 1977, 1978, 2106, 2245
BmiI	GGNNCC	4 cut(s)	26, 1386, 1412, 1979
BmrFI	CCNGG	3 cut(s)	322, 659, 1508
BmsI	GCATC	4 cut(s)	394, 856, 1370, 2061
BoxI	GACNNNNGTC	2 cut(s)	690, 1331
BpiI	GAAGAC	1 cut(s)	2260
BplI	GAGNNNNNCTC	2 cut(s)	137, 169
BpmI	CTGGAG	2 cut(s)	1490, 2087
Bpu10I	CCTNAGC	2 cut(s)	1368, 2363
Bpu1102I	GCTNAGC	2 cut(s)	192, 1293
Bpu14I	TTCGAA	1 cut(s)	14
BpuEI	CTTGAG	8 cut(s)	320, 449, 851, 1245, 1787, 1817, 1934, 2291
BpuMI	CCSGG	1 cut(s)	322
Bsa29I	ATCGAT	1 cut(s)	987
BsaAI	YACGTR	1 cut(s)	702
BsaI	GGTCTC	3 cut(s)	878, 1765, 1947
BsaJI	CCNNGG	4 cut(s)	384, 435, 877, 1379
BsaWI	WCCGGW	2 cut(s)	1902, 2046
BsaXI	ACNNNNNCTCC	2 cut(s)	2392, 2422
Bsc4I	CCNNNNNNNGG	5 cut(s)	694, 1234, 1756, 1757, 2182
Bse21I	CCTNAGG	1 cut(s)	1229
Bse3DI	GCAATG	1 cut(s)	1482
BseAI	TCCGGA	1 cut(s)	2046
BseBI	CCWGG	2 cut(s)	659, 1508
BseCI	ATCGAT	1 cut(s)	987
BseDI	CCNNGG	4 cut(s)	384, 435, 877, 1379
BseGI	GGATG	6 cut(s)	409, 607, 622, 960, 1516, 1583
BseLI	CCNNNNNNNGG	5 cut(s)	694, 1234, 1756, 1757, 2182
BseMI	GCAATG	1 cut(s)	1482
BseRI	GAGGAG	5 cut(s)	104, 218, 386, 658, 2033
BseSI	GKGCMC	3 cut(s)	885, 1414, 1981
BsgI	GTGCAG	1 cut(s)	935
Bsh1236I	CGCG	1 cut(s)	315
BshFI	GGCC	8 cut(s)	27, 383, 440, 1412, 1979, 2006, 2186, 2404
BshVI	ATCGAT	1 cut(s)	987
BsiHKAI	GWGCWC	3 cut(s)	1374, 1803, 2232
BsiHKCI	CYCGRG	1 cut(s)	1380
BsiSI	CCGG	3 cut(s)	322, 1903, 2047
BslFI	GGGAC	3 cut(s)	1039, 1398, 1708
BslI	CCNNNNNNNGG	5 cut(s)	694, 1234, 1756, 1757, 2182
BsmAI	GTCTC	6 cut(s)	86, 878, 1435, 1765, 1947, 2183
BsmBI	CGTCTC	2 cut(s)	86, 1435
BsmFI	GGGAC	3 cut(s)	1039, 1398, 1708
BsnI	GGCC	8 cut(s)	27, 383, 440, 1412, 1979, 2006, 2186, 2404
Bso31I	GGTCTC	3 cut(s)	878, 1765, 1947
BsoBI	CYCGRG	1 cut(s)	1380
Bsp119I	TTCGAA	1 cut(s)	14
Bsp120I	GGGCCC	2 cut(s)	1410, 1977
Bsp1286I	GDGCHC	6 cut(s)	885, 1374, 1414, 1803, 1981, 2232
Bsp13I	TCCGGA	1 cut(s)	2046
Bsp1407I	TGTACA	1 cut(s)	345
Bsp143I	GATC	5 cut(s)	37, 984, 998, 1010, 2214
Bsp1720I	GCTNAGC	2 cut(s)	192, 1293
Bsp19I	CCATGG	1 cut(s)	877
BspACI	CCGC	4 cut(s)	28, 980, 2096, 2284
BspANI	GGCC	8 cut(s)	27, 383, 440, 1412, 1979, 2006, 2186, 2404
BspDI	ATCGAT	1 cut(s)	987
BspEI	TCCGGA	1 cut(s)	2046
BspFNI	CGCG	1 cut(s)	315
BspHI	TCATGA	3 cut(s)	675, 1738, 2217
BspLI	GGNNCC	4 cut(s)	26, 1386, 1412, 1979
BspMI	ACCTGC	3 cut(s)	1225, 1396, 1560
BspPI	GGATC	2 cut(s)	1006, 1018
BspQI	GCTCTTC	2 cut(s)	522, 2220
BspT104I	TTCGAA	1 cut(s)	14
BspTNI	GGTCTC	3 cut(s)	878, 1765, 1947
BsrDI	GCAATG	1 cut(s)	1482
BsrGI	TGTACA	1 cut(s)	345
BssECI	CCNNGG	4 cut(s)	384, 435, 877, 1379
BssMI	GATC	5 cut(s)	37, 984, 998, 1010, 2214
BssSI	CACGAG	1 cut(s)	1470
BssT1I	CCWWGG	2 cut(s)	435, 877
Bst2BI	CACGAG	1 cut(s)	1470
Bst2UI	CCWGG	2 cut(s)	659, 1508
Bst4CI	ACNGT	4 cut(s)	220, 712, 1562, 1948
Bst6I	CTCTTC	6 cut(s)	522, 534, 1988, 2031, 2220, 2427
BstAPI	GCANNNNNTGC	3 cut(s)	806, 922, 1358
BstAUI	TGTACA	1 cut(s)	345
BstBAI	YACGTR	1 cut(s)	702
BstBI	TTCGAA	1 cut(s)	14
BstC8I	GCNNGC	2 cut(s)	266, 1864
BstDSI	CCRYGG	1 cut(s)	877
BstENI	CCTNNNNNAGG	2 cut(s)	1232, 2180
BstF5I	GGATG	6 cut(s)	409, 607, 622, 960, 1516, 1583
BstFNI	CGCG	1 cut(s)	315
BstH2I	RGCGCY	1 cut(s)	359
BstHHI	GCGC	3 cut(s)	315, 358, 823
BstKTI	GATC	5 cut(s)	40, 987, 1001, 1013, 2217
BstMAI	GTCTC	6 cut(s)	86, 878, 1435, 1765, 1947, 2183
BstMBI	GATC	5 cut(s)	37, 984, 998, 1010, 2214
BstNI	CCWGG	2 cut(s)	659, 1508
BstNSI	RCATGY	3 cut(s)	889, 899, 2170
BstPAI	GACNNNNGTC	2 cut(s)	690, 1331
BstSCI	CCNGG	3 cut(s)	320, 657, 1506
BstSFI	CTRYAG	1 cut(s)	519
BstSLI	GKGCMC	3 cut(s)	885, 1414, 1981
BstUI	CGCG	1 cut(s)	315
BstV2I	GAAGAC	1 cut(s)	2260
BstX2I	RGATCY	2 cut(s)	998, 1010
BstXI	CCANNNNNNTGG	1 cut(s)	1837
BstYI	RGATCY	2 cut(s)	998, 1010
Bsu15I	ATCGAT	1 cut(s)	987
Bsu36I	CCTNAGG	1 cut(s)	1229
BsuI	GTATCC	1 cut(s)	700
BsuRI	GGCC	8 cut(s)	27, 383, 440, 1412, 1979, 2006, 2186, 2404
BsuTUI	ATCGAT	1 cut(s)	987
BtgI	CCRYGG	1 cut(s)	877
BtsCI	GGATG	6 cut(s)	409, 607, 622, 960, 1516, 1583
BtsI	GCAGTG	1 cut(s)	1818
BtsIMutI	CAGTG	3 cut(s)	1045, 1116, 1818
BveI	ACCTGC	3 cut(s)	1225, 1396, 1560
Cac8I	GCNNGC	2 cut(s)	266, 1864
CciI	TCATGA	3 cut(s)	675, 1738, 2217
CfoI	GCGC	3 cut(s)	315, 358, 823
Cfr13I	GGNCC	9 cut(s)	25, 1385, 1410, 1411, 1934, 1977, 1978, 2106, 2245
ClaI	ATCGAT	1 cut(s)	987
CseI	GACGC	1 cut(s)	1349
Csp6I	GTAC	6 cut(s)	335, 346, 505, 681, 1123, 1376
CviQI	GTAC	6 cut(s)	335, 346, 505, 681, 1123, 1376
DpnI	GATC	5 cut(s)	39, 986, 1000, 1012, 2216
DpnII	GATC	5 cut(s)	37, 984, 998, 1010, 2214
DriI	GACNNNNNGTC	1 cut(s)	2323
EaeI	YGGCCR	1 cut(s)	381
Eam1104I	CTCTTC	6 cut(s)	522, 534, 1988, 2031, 2220, 2427
Eam1105I	GACNNNNNGTC	1 cut(s)	2323
EarI	CTCTTC	6 cut(s)	522, 534, 1988, 2031, 2220, 2427
EciI	GGCGGA	1 cut(s)	995
Ecl136II	GAGCTC	3 cut(s)	1372, 1801, 2230
Eco130I	CCWWGG	2 cut(s)	435, 877
Eco147I	AGGCCT	2 cut(s)	440, 2006
Eco24I	GRGCYC	5 cut(s)	1374, 1414, 1803, 1981, 2232
Eco31I	GGTCTC	3 cut(s)	878, 1765, 1947
Eco32I	GATATC	1 cut(s)	1736
Eco47I	GGWCC	4 cut(s)	1385, 1934, 2106, 2245
Eco47III	AGCGCT	1 cut(s)	357
Eco53kI	GAGCTC	3 cut(s)	1372, 1801, 2230
Eco57I	CTGAAG	3 cut(s)	1350, 1674, 2379
Eco81I	CCTNAGG	1 cut(s)	1229
Eco88I	CYCGRG	1 cut(s)	1380
EcoICRI	GAGCTC	3 cut(s)	1372, 1801, 2230
EcoNI	CCTNNNNNAGG	2 cut(s)	1232, 2180
EcoO109I	RGGNCCY	7 cut(s)	1385, 1410, 1411, 1934, 1977, 1978, 2106
EcoRII	CCWGG	2 cut(s)	657, 1506
EcoRV	GATATC	1 cut(s)	1736
EcoT14I	CCWWGG	2 cut(s)	435, 877
EcoT38I	GRGCYC	5 cut(s)	1374, 1414, 1803, 1981, 2232
ErhI	CCWWGG	2 cut(s)	435, 877
Esp3I	CGTCTC	2 cut(s)	86, 1435
FalI	AAGNNNNNCTT	4 cut(s)	516, 548, 2377, 2409
FaqI	GGGAC	3 cut(s)	1039, 1398, 1708
FauNDI	CATATG	2 cut(s)	1572, 1782
FbaI	TGATCA	2 cut(s)	37, 2214
FokI	GGATG	6 cut(s)	416, 614, 629, 947, 1523, 1570
FriOI	GRGCYC	5 cut(s)	1374, 1414, 1803, 1981, 2232
FspBI	CTAG	8 cut(s)	99, 392, 636, 776, 1103, 1289, 1805, 2289
FspI	TGCGCA	1 cut(s)	822
GlaI	GCGC	3 cut(s)	314, 357, 822
GsuI	CTGGAG	2 cut(s)	1490, 2087
HaeII	RGCGCY	1 cut(s)	359
HaeIII	GGCC	8 cut(s)	27, 383, 440, 1412, 1979, 2006, 2186, 2404
HapII	CCGG	3 cut(s)	322, 1903, 2047
HgaI	GACGC	1 cut(s)	1349
HhaI	GCGC	3 cut(s)	315, 358, 823
Hin6I	GCGC	3 cut(s)	313, 356, 821
HinP1I	GCGC	3 cut(s)	313, 356, 821
HincII	GTYRAC	4 cut(s)	223, 715, 973, 2317
HindII	GTYRAC	4 cut(s)	223, 715, 973, 2317
HindIII	AAGCTT	2 cut(s)	650, 827
HpaII	CCGG	3 cut(s)	322, 1903, 2047
HphI	GGTGA	8 cut(s)	271, 1322, 1541, 1559, 1897, 2003, 2110, 2308
Hpy166II	GTNNAC	4 cut(s)	223, 715, 973, 2317
Hpy8I	GTNNAC	4 cut(s)	223, 715, 973, 2317
HpyAV	CCTTC	7 cut(s)	298, 744, 748, 1256, 1649, 1693, 2403
HpyCH4III	ACNGT	4 cut(s)	220, 712, 1562, 1948
HpyCH4IV	ACGT	2 cut(s)	701, 2257
HpySE526I	ACGT	2 cut(s)	701, 2257
HspAI	GCGC	3 cut(s)	313, 356, 821
Kpn2I	TCCGGA	1 cut(s)	2046
Ksp22I	TGATCA	2 cut(s)	37, 2214
Kzo9I	GATC	5 cut(s)	37, 984, 998, 1010, 2214
LguI	GCTCTTC	2 cut(s)	522, 2220
LmnI	GCTCC	4 cut(s)	1189, 1806, 2046, 2235
LweI	GCATC	4 cut(s)	394, 856, 1370, 2061
MaeI	CTAG	8 cut(s)	99, 392, 636, 776, 1103, 1289, 1805, 2289
MaeII	ACGT	2 cut(s)	701, 2257
MaeIII	GTNAC	7 cut(s)	44, 697, 1324, 1529, 1547, 1991, 2158
MalI	GATC	5 cut(s)	39, 986, 1000, 1012, 2216
MboI	GATC	5 cut(s)	37, 984, 998, 1010, 2214
MflI	RGATCY	2 cut(s)	998, 1010
MhlI	GDGCHC	6 cut(s)	885, 1374, 1414, 1803, 1981, 2232
MlyI	GAGTC	7 cut(s)	266, 808, 1108, 1128, 1555, 1771, 2185
MmeI	TCCRAC	3 cut(s)	348, 568, 1177
MroI	TCCGGA	1 cut(s)	2046
MroXI	GAANNNNTTC	1 cut(s)	1245
MseI	TTAA	4 cut(s)	105, 177, 2144, 2384
MslI	CAYNNNNRTG	1 cut(s)	1903
MspA1I	CMGCKG	1 cut(s)	1214
MspI	CCGG	3 cut(s)	322, 1903, 2047
MspR9I	CCNGG	3 cut(s)	322, 659, 1508
MvaI	CCWGG	2 cut(s)	659, 1508
MvnI	CGCG	1 cut(s)	315
NciI	CCSGG	1 cut(s)	322
NcoI	CCATGG	1 cut(s)	877
NdeI	CATATG	2 cut(s)	1572, 1782
NdeII	GATC	5 cut(s)	37, 984, 998, 1010, 2214
NlaIV	GGNNCC	4 cut(s)	26, 1386, 1412, 1979
NmeAIII	GCCGAG	3 cut(s)	409, 2212, 2430
NmuCI	GTSAC	5 cut(s)	44, 1324, 1547, 1991, 2158
NsbI	TGCGCA	1 cut(s)	822
NspI	RCATGY	3 cut(s)	889, 899, 2170
NspV	TTCGAA	1 cut(s)	14
PagI	TCATGA	3 cut(s)	675, 1738, 2217
PaqCI	CACCTGC	1 cut(s)	1560
PceI	AGGCCT	2 cut(s)	440, 2006
PciI	ACATGT	1 cut(s)	2166
PciSI	GCTCTTC	2 cut(s)	522, 2220
PdmI	GAANNNNTTC	1 cut(s)	1245
PfeI	GAWTC	5 cut(s)	59, 198, 496, 514, 2050
PfoI	TCCNGGA	2 cut(s)	657, 1506
PleI	GAGTC	7 cut(s)	266, 808, 1107, 1128, 1554, 1770, 2185
PpsI	GAGTC	7 cut(s)	266, 808, 1107, 1128, 1554, 1770, 2185
Ppu21I	YACGTR	1 cut(s)	702
PpuMI	RGGWCCY	3 cut(s)	1385, 1934, 2106
PscI	ACATGT	1 cut(s)	2166
PshAI	GACNNNNGTC	2 cut(s)	690, 1331
Psp124BI	GAGCTC	3 cut(s)	1374, 1803, 2232
Psp5II	RGGWCCY	3 cut(s)	1385, 1934, 2106
Psp6I	CCWGG	2 cut(s)	657, 1506
PspGI	CCWGG	2 cut(s)	657, 1506
PspN4I	GGNNCC	4 cut(s)	26, 1386, 1412, 1979
PspOMI	GGGCCC	2 cut(s)	1410, 1977
PspPI	GGNCC	9 cut(s)	25, 1385, 1410, 1411, 1934, 1977, 1978, 2106, 2245
PspPPI	RGGWCCY	3 cut(s)	1385, 1934, 2106
PsuI	RGATCY	2 cut(s)	998, 1010
PvuII	CAGCTG	1 cut(s)	1214
RsaI	GTAC	6 cut(s)	336, 347, 506, 682, 1124, 1377
RsaNI	GTAC	6 cut(s)	335, 346, 505, 681, 1123, 1376
RseI	CAYNNNNRTG	1 cut(s)	1903
SacI	GAGCTC	3 cut(s)	1374, 1803, 2232
SapI	GCTCTTC	2 cut(s)	522, 2220
SaqAI	TTAA	4 cut(s)	105, 177, 2144, 2384
Sau3AI	GATC	5 cut(s)	37, 984, 998, 1010, 2214
Sau96I	GGNCC	9 cut(s)	25, 1385, 1410, 1411, 1934, 1977, 1978, 2106, 2245
ScaI	AGTACT	1 cut(s)	682
SchI	GAGTC	7 cut(s)	266, 808, 1108, 1128, 1555, 1771, 2185
ScrFI	CCNGG	3 cut(s)	322, 659, 1508
SduI	GDGCHC	6 cut(s)	885, 1374, 1414, 1803, 1981, 2232
SfaNI	GCATC	4 cut(s)	394, 856, 1370, 2061
SfcI	CTRYAG	1 cut(s)	519
SfuI	TTCGAA	1 cut(s)	14
SinI	GGWCC	4 cut(s)	1385, 1934, 2106, 2245
SmiMI	CAYNNNNRTG	1 cut(s)	1903
SmlI	CTYRAG	8 cut(s)	299, 464, 830, 1260, 1766, 1796, 1913, 2306
SmoI	CTYRAG	8 cut(s)	299, 464, 830, 1260, 1766, 1796, 1913, 2306
SpeI	ACTAGT	1 cut(s)	2288
SseBI	AGGCCT	2 cut(s)	440, 2006
SsiI	CCGC	4 cut(s)	28, 980, 2096, 2284
SspI	AATATT	1 cut(s)	1184
SspMI	CTAG	8 cut(s)	99, 392, 636, 776, 1103, 1289, 1805, 2289
SstI	GAGCTC	3 cut(s)	1374, 1803, 2232
StuI	AGGCCT	2 cut(s)	440, 2006
StyD4I	CCNGG	3 cut(s)	320, 657, 1506
StyI	CCWWGG	2 cut(s)	435, 877
TaaI	ACNGT	4 cut(s)	220, 712, 1562, 1948
TaiI	ACGT	2 cut(s)	704, 2260
TaqI	TCGA	5 cut(s)	8, 14, 201, 449, 987
TatI	WGTACW	4 cut(s)	345, 504, 680, 1122
TauI	GCSGC	2 cut(s)	30, 2099
TfiI	GAWTC	5 cut(s)	59, 198, 496, 514, 2050
Tru1I	TTAA	4 cut(s)	105, 177, 2144, 2384
Tru9I	TTAA	4 cut(s)	105, 177, 2144, 2384
TscAI	CASTG	3 cut(s)	1045, 1123, 1818
TseFI	GTSAC	5 cut(s)	44, 1324, 1547, 1991, 2158
Tsp45I	GTSAC	5 cut(s)	44, 1324, 1547, 1991, 2158
TspDTI	ATGAA	9 cut(s)	302, 467, 664, 1426, 1572, 1918, 2018, 2234, 2361
TspGWI	ACGGA	2 cut(s)	953, 2118
TspRI	CASTG	3 cut(s)	1045, 1123, 1818
VpaK11BI	GGWCC	4 cut(s)	1385, 1934, 2106, 2245
XagI	CCTNNNNNAGG	2 cut(s)	1232, 2180
XapI	RAATTY	4 cut(s)	17, 548, 559, 722
XbaI	TCTAGA	1 cut(s)	1102
XceI	RCATGY	3 cut(s)	889, 899, 2170
XmnI	GAANNNNTTC	1 cut(s)	1245
XspI	CTAG	8 cut(s)	99, 392, 636, 776, 1103, 1289, 1805, 2289
ZrmI	AGTACT	1 cut(s)	682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.