component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1308, 1659 |
| AarI | CACCTGC | 1 cut(s) | 1620 |
| Acc36I | ACCTGC | 2 cut(s) | 814, 1620 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2044 |
| AccII | CGCG | 2 cut(s) | 315, 1401 |
| AciI | CCGC | 5 cut(s) | 196, 1401, 1441, 1978, 2460 |
| AclWI | GGATC | 4 cut(s) | 584, 728, 741, 1154 |
| AcsI | RAATTY | 1 cut(s) | 770 |
| AcuI | CTGAAG | 5 cut(s) | 485, 594, 874, 1734, 2147 |
| AcvI | CACGTG | 1 cut(s) | 750 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AdeI | CACNNNGTG | 1 cut(s) | 1778 |
| AfaI | GTAC | 6 cut(s) | 336, 347, 606, 1007, 1178, 2582 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 124, 670, 2044, 2068, 2263, 2370 |
| AflIII | ACRYGT | 1 cut(s) | 2336 |
| AgeI | ACCGGT | 1 cut(s) | 106 |
| AgsI | TTSAA | 8 cut(s) | 114, 445, 1141, 1184, 1232, 1261, 1295, 2551 |
| AjnI | CCWGG | 4 cut(s) | 922, 1374, 2054, 2496 |
| AleI | CACNNNNGTG | 1 cut(s) | 1170 |
| Alw21I | GWGCWC | 2 cut(s) | 1875, 2313 |
| Alw26I | GTCTC | 5 cut(s) | 12, 932, 1688, 1786, 1828 |
| AlwI | GGATC | 4 cut(s) | 584, 728, 741, 1154 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 326, 463, 581, 617, 877 |
| Ama87I | CYCGRG | 1 cut(s) | 1868 |
| AoxI | GGCC | 5 cut(s) | 438, 1107, 1372, 2015, 2058 |
| ApaI | GGGCCC | 2 cut(s) | 2019, 2062 |
| ApoI | RAATTY | 1 cut(s) | 770 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 182, 214 |
| AseI | ATTAAT | 1 cut(s) | 498 |
| AsiGI | ACCGGT | 1 cut(s) | 106 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 34 |
| AspLEI | GCGC | 2 cut(s) | 315, 2269 |
| AsuHPI | GGTGA | 8 cut(s) | 80, 101, 215, 772, 1379, 1547, 1601, 2084 |
| AvaI | CYCGRG | 1 cut(s) | 1868 |
| AvaII | GGWCC | 7 cut(s) | 18, 1064, 1403, 1470, 2035, 2187, 2326 |
| AxyI | CCTNAGG | 1 cut(s) | 1283 |
| BaeGI | GKGCMC | 2 cut(s) | 2019, 2062 |
| BamHI | GGATCC | 1 cut(s) | 733 |
| BanII | GRGCYC | 4 cut(s) | 1875, 2019, 2062, 2313 |
| BauI | CACGAG | 3 cut(s) | 792, 1170, 1530 |
| BbrPI | CACGTG | 1 cut(s) | 750 |
| BbsI | GAAGAC | 1 cut(s) | 866 |
| Bbv12I | GWGCWC | 2 cut(s) | 1875, 2313 |
| BccI | CCATC | 8 cut(s) | 59, 152, 644, 1070, 1358, 1414, 1471, 2520 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 524, 558 |
| BciT130I | CCWGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| BciVI | GTATCC | 1 cut(s) | 748 |
| BclI | TGATCA | 2 cut(s) | 1707, 2298 |
| BcoDI | GTCTC | 5 cut(s) | 12, 932, 1688, 1786, 1828 |
| BfaI | CTAG | 2 cut(s) | 738, 2147 |
| BfmI | CTRYAG | 2 cut(s) | 1613, 2439 |
| BfuAI | ACCTGC | 2 cut(s) | 814, 1620 |
| BfuI | GTATCC | 1 cut(s) | 748 |
| BglII | AGATCT | 2 cut(s) | 882, 2470 |
| BlpI | GCTNAGC | 1 cut(s) | 1347 |
| Bme1390I | CCNGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| Bme18I | GGWCC | 7 cut(s) | 18, 1064, 1403, 1470, 2035, 2187, 2326 |
| BmeT110I | CYCGRG | 1 cut(s) | 1868 |
| BmrFI | CCNGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| BmrI | ACTGGG | 2 cut(s) | 265, 819 |
| BmsI | GCATC | 5 cut(s) | 394, 1318, 1897, 1933, 2142 |
| BmuI | ACTGGG | 2 cut(s) | 265, 819 |
| BpiI | GAAGAC | 1 cut(s) | 866 |
| BpmI | CTGGAG | 5 cut(s) | 146, 899, 1397, 1794, 1847 |
| Bpu10I | CCTNAGC | 3 cut(s) | 519, 1428, 2383 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1347 |
| BpuEI | CTTGAG | 3 cut(s) | 320, 2006, 2141 |
| BsaAI | YACGTR | 1 cut(s) | 750 |
| BsaBI | GATNNNNATC | 4 cut(s) | 918, 1551, 2297, 2538 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 2 cut(s) | 932, 1688 |
| BsaJI | CCNNGG | 5 cut(s) | 39, 435, 849, 1668, 2055 |
| BsaWI | WCCGGW | 2 cut(s) | 106, 1387 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 41, 71 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 124, 670, 2044, 2068, 2263, 2370 |
| Bse118I | RCCGGY | 1 cut(s) | 106 |
| Bse1I | ACTGG | 3 cut(s) | 260, 814, 2392 |
| Bse21I | CCTNAGG | 1 cut(s) | 1283 |
| Bse3DI | GCAATG | 2 cut(s) | 1542, 2434 |
| Bse8I | GATNNNNATC | 4 cut(s) | 918, 1551, 2297, 2538 |
| BseBI | CCWGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| BseDI | CCNNGG | 5 cut(s) | 39, 435, 849, 1668, 2055 |
| BseGI | GGATG | 6 cut(s) | 49, 409, 565, 1201, 1519, 1576 |
| BseJI | GATNNNNATC | 4 cut(s) | 918, 1551, 2297, 2538 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 124, 670, 2044, 2068, 2263, 2370 |
| BseMI | GCAATG | 2 cut(s) | 1542, 2434 |
| BseMII | CTCAG | 8 cut(s) | 510, 660, 920, 1122, 1338, 1419, 2174, 2391 |
| BseNI | ACTGG | 3 cut(s) | 260, 814, 2392 |
| BseRI | GAGGAG | 4 cut(s) | 62, 566, 686, 1846 |
| BseSI | GKGCMC | 2 cut(s) | 2019, 2062 |
| BseYI | CCCAGC | 2 cut(s) | 2322, 2510 |
| BsgI | GTGCAG | 4 cut(s) | 564, 852, 989, 1022 |
| Bsh1236I | CGCG | 2 cut(s) | 315, 1401 |
| BshFI | GGCC | 5 cut(s) | 440, 1109, 1374, 2017, 2060 |
| BshTI | ACCGGT | 1 cut(s) | 106 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1875, 2313 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1868 |
| BsiSI | CCGG | 2 cut(s) | 107, 1388 |
| BslFI | GGGAC | 2 cut(s) | 2048, 2339 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 124, 670, 2044, 2068, 2263, 2370 |
| BsmAI | GTCTC | 5 cut(s) | 12, 932, 1688, 1786, 1828 |
| BsmBI | CGTCTC | 2 cut(s) | 12, 1828 |
| BsmFI | GGGAC | 2 cut(s) | 2048, 2339 |
| BsmI | GAATGC | 1 cut(s) | 241 |
| BsnI | GGCC | 5 cut(s) | 440, 1109, 1374, 2017, 2060 |
| Bso31I | GGTCTC | 2 cut(s) | 932, 1688 |
| BsoBI | CYCGRG | 1 cut(s) | 1868 |
| Bsp120I | GGGCCC | 2 cut(s) | 2015, 2058 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1875, 2019, 2062, 2313 |
| Bsp1407I | TGTACA | 1 cut(s) | 345 |
| Bsp143I | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1347 |
| Bsp19I | CCATGG | 1 cut(s) | 1668 |
| BspACI | CCGC | 5 cut(s) | 196, 1401, 1441, 1978, 2460 |
| BspANI | GGCC | 5 cut(s) | 440, 1109, 1374, 2017, 2060 |
| BspCNI | CTCAG | 8 cut(s) | 511, 661, 919, 1123, 1339, 1420, 2175, 2392 |
| BspFNI | CGCG | 2 cut(s) | 315, 1401 |
| BspHI | TCATGA | 2 cut(s) | 726, 1798 |
| BspMAI | CTGCAG | 1 cut(s) | 1617 |
| BspMI | ACCTGC | 2 cut(s) | 814, 1620 |
| BspPI | GGATC | 4 cut(s) | 584, 728, 741, 1154 |
| BspQI | GCTCTTC | 1 cut(s) | 2301 |
| BspTNI | GGTCTC | 2 cut(s) | 932, 1688 |
| BsrDI | GCAATG | 2 cut(s) | 1542, 2434 |
| BsrFI | RCCGGY | 1 cut(s) | 106 |
| BsrGI | TGTACA | 1 cut(s) | 345 |
| BsrI | ACTGG | 3 cut(s) | 260, 814, 2392 |
| BssAI | RCCGGY | 1 cut(s) | 106 |
| BssECI | CCNNGG | 5 cut(s) | 39, 435, 849, 1668, 2055 |
| BssMI | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 3 cut(s) | 792, 1170, 1530 |
| BssT1I | CCWWGG | 3 cut(s) | 435, 849, 1668 |
| Bst2BI | CACGAG | 3 cut(s) | 792, 1170, 1530 |
| Bst2UI | CCWGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| Bst4CI | ACNGT | 6 cut(s) | 210, 220, 760, 935, 1021, 2369 |
| Bst6I | CTCTTC | 4 cut(s) | 543, 1747, 2169, 2301 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 976 |
| BstAUI | TGTACA | 1 cut(s) | 345 |
| BstBAI | YACGTR | 1 cut(s) | 750 |
| BstC8I | GCNNGC | 6 cut(s) | 266, 680, 1148, 1770, 2320, 2379 |
| BstDSI | CCRYGG | 1 cut(s) | 1668 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 2066, 2261 |
| BstF5I | GGATG | 6 cut(s) | 49, 409, 565, 1201, 1519, 1576 |
| BstFNI | CGCG | 2 cut(s) | 315, 1401 |
| BstHHI | GCGC | 2 cut(s) | 315, 2269 |
| BstKTI | GATC | 9 cut(s) | 592, 736, 747, 885, 1162, 1710, 2169, 2301, 2473 |
| BstMAI | GTCTC | 5 cut(s) | 12, 932, 1688, 1786, 1828 |
| BstMBI | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 829, 976, 1152, 1277, 1915, 2057, 2286, 2444, 2482 |
| BstNI | CCWGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| BstNSI | RCATGY | 1 cut(s) | 943 |
| BstSCI | CCNGG | 4 cut(s) | 922, 1374, 2054, 2496 |
| BstSFI | CTRYAG | 2 cut(s) | 1613, 2439 |
| BstSLI | GKGCMC | 2 cut(s) | 2019, 2062 |
| BstUI | CGCG | 2 cut(s) | 315, 1401 |
| BstV2I | GAAGAC | 1 cut(s) | 866 |
| BstX2I | RGATCY | 3 cut(s) | 733, 882, 2470 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1909 |
| BstYI | RGATCY | 3 cut(s) | 733, 882, 2470 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1283 |
| BsuI | GTATCC | 1 cut(s) | 748 |
| BsuRI | GGCC | 5 cut(s) | 440, 1109, 1374, 2017, 2060 |
| BtgI | CCRYGG | 1 cut(s) | 1668 |
| BtsCI | GGATG | 6 cut(s) | 49, 409, 565, 1201, 1519, 1576 |
| BtsI | GCAGTG | 2 cut(s) | 1157, 1890 |
| BtsIMutI | CAGTG | 3 cut(s) | 1157, 1710, 1890 |
| BveI | ACCTGC | 2 cut(s) | 814, 1620 |
| Cac8I | GCNNGC | 6 cut(s) | 266, 680, 1148, 1770, 2320, 2379 |
| CaiI | CAGNNNCTG | 5 cut(s) | 326, 463, 581, 617, 877 |
| CciI | TCATGA | 2 cut(s) | 726, 1798 |
| CfoI | GCGC | 2 cut(s) | 315, 2269 |
| Cfr10I | RCCGGY | 1 cut(s) | 106 |
| CseI | GACGC | 1 cut(s) | 304 |
| Csp6I | GTAC | 6 cut(s) | 335, 346, 605, 1006, 1177, 2581 |
| CspAI | ACCGGT | 1 cut(s) | 106 |
| CviQI | GTAC | 6 cut(s) | 335, 346, 605, 1006, 1177, 2581 |
| DpnI | GATC | 9 cut(s) | 591, 735, 746, 884, 1161, 1709, 2168, 2300, 2472 |
| DpnII | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| DraIII | CACNNNGTG | 1 cut(s) | 1778 |
| Eam1104I | CTCTTC | 4 cut(s) | 543, 1747, 2169, 2301 |
| EarI | CTCTTC | 4 cut(s) | 543, 1747, 2169, 2301 |
| Ecl136II | GAGCTC | 2 cut(s) | 1873, 2311 |
| Eco130I | CCWWGG | 3 cut(s) | 435, 849, 1668 |
| Eco147I | AGGCCT | 2 cut(s) | 440, 1374 |
| Eco24I | GRGCYC | 4 cut(s) | 1875, 2019, 2062, 2313 |
| Eco31I | GGTCTC | 2 cut(s) | 932, 1688 |
| Eco32I | GATATC | 3 cut(s) | 122, 1549, 1796 |
| Eco47I | GGWCC | 7 cut(s) | 18, 1064, 1403, 1470, 2035, 2187, 2326 |
| Eco53kI | GAGCTC | 2 cut(s) | 1873, 2311 |
| Eco57I | CTGAAG | 5 cut(s) | 485, 594, 874, 1734, 2147 |
| Eco72I | CACGTG | 1 cut(s) | 750 |
| Eco81I | CCTNAGG | 1 cut(s) | 1283 |
| Eco88I | CYCGRG | 1 cut(s) | 1868 |
| EcoICRI | GAGCTC | 2 cut(s) | 1873, 2311 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 2066, 2261 |
| EcoO109I | RGGNCCY | 5 cut(s) | 2015, 2016, 2058, 2059, 2187 |
| EcoRII | CCWGG | 4 cut(s) | 922, 1374, 2054, 2496 |
| EcoRV | GATATC | 3 cut(s) | 122, 1549, 1796 |
| EcoT14I | CCWWGG | 3 cut(s) | 435, 849, 1668 |
| EcoT38I | GRGCYC | 4 cut(s) | 1875, 2019, 2062, 2313 |
| ErhI | CCWWGG | 3 cut(s) | 435, 849, 1668 |
| Esp3I | CGTCTC | 2 cut(s) | 12, 1828 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 972, 1004, 2060, 2092, 2298, 2330 |
| FaqI | GGGAC | 2 cut(s) | 2048, 2339 |
| FauI | CCCGC | 1 cut(s) | 1448 |
| FauNDI | CATATG | 2 cut(s) | 1632, 1854 |
| FbaI | TGATCA | 2 cut(s) | 1707, 2298 |
| FokI | GGATG | 6 cut(s) | 56, 416, 572, 1208, 1526, 1583 |
| FriOI | GRGCYC | 4 cut(s) | 1875, 2019, 2062, 2313 |
| FspBI | CTAG | 2 cut(s) | 738, 2147 |
| GlaI | GCGC | 2 cut(s) | 314, 2268 |
| GsaI | CCCAGC | 2 cut(s) | 2326, 2514 |
| GsuI | CTGGAG | 5 cut(s) | 146, 899, 1397, 1794, 1847 |
| HaeIII | GGCC | 5 cut(s) | 440, 1109, 1374, 2017, 2060 |
| HapII | CCGG | 2 cut(s) | 107, 1388 |
| HgaI | GACGC | 1 cut(s) | 304 |
| HhaI | GCGC | 2 cut(s) | 315, 2269 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 2 cut(s) | 313, 2267 |
| HinP1I | GCGC | 2 cut(s) | 313, 2267 |
| HincII | GTYRAC | 1 cut(s) | 2397 |
| HindII | GTYRAC | 1 cut(s) | 2397 |
| HindIII | AAGCTT | 1 cut(s) | 2120 |
| HpaII | CCGG | 2 cut(s) | 107, 1388 |
| HphI | GGTGA | 8 cut(s) | 80, 101, 215, 772, 1379, 1547, 1601, 2084 |
| Hpy166II | GTNNAC | 3 cut(s) | 223, 763, 2397 |
| Hpy8I | GTNNAC | 3 cut(s) | 223, 763, 2397 |
| HpyAV | CCTTC | 8 cut(s) | 298, 618, 724, 792, 796, 850, 1364, 1709 |
| HpyCH4III | ACNGT | 6 cut(s) | 210, 220, 760, 935, 1021, 2369 |
| HpyCH4IV | ACGT | 4 cut(s) | 749, 951, 2338, 2358 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 829, 976, 1152, 1277, 1915, 2057, 2286, 2444, 2482 |
| HpySE526I | ACGT | 4 cut(s) | 749, 951, 2338, 2358 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 2 cut(s) | 313, 2267 |
| Ksp22I | TGATCA | 2 cut(s) | 1707, 2298 |
| Kzo9I | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| LguI | GCTCTTC | 1 cut(s) | 2301 |
| LmnI | GCTCC | 3 cut(s) | 1036, 1378, 2316 |
| LweI | GCATC | 5 cut(s) | 394, 1318, 1897, 1933, 2142 |
| MaeI | CTAG | 2 cut(s) | 738, 2147 |
| MaeII | ACGT | 4 cut(s) | 749, 951, 2338, 2358 |
| MaeIII | GTNAC | 7 cut(s) | 89, 316, 571, 935, 1589, 1607, 2072 |
| MalI | GATC | 9 cut(s) | 591, 735, 746, 884, 1161, 1709, 2168, 2300, 2472 |
| MboI | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| MflI | RGATCY | 3 cut(s) | 733, 882, 2470 |
| MhlI | GDGCHC | 4 cut(s) | 1875, 2019, 2062, 2313 |
| MluCI | AATT | 5 cut(s) | 585, 722, 770, 1340, 2101 |
| MlyI | GAGTC | 7 cut(s) | 161, 332, 563, 1257, 1615, 2215, 2266 |
| MmeI | TCCRAC | 2 cut(s) | 348, 537 |
| MroXI | GAANNNNTTC | 1 cut(s) | 34 |
| MseI | TTAA | 6 cut(s) | 132, 177, 351, 498, 774, 1863 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1170 |
| MspI | CCGG | 2 cut(s) | 107, 1388 |
| MspR9I | CCNGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| Mva1269I | GAATGC | 1 cut(s) | 241 |
| MvaI | CCWGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| MvnI | CGCG | 2 cut(s) | 315, 1401 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 829, 976, 1152, 1277, 1915, 2057, 2286, 2444, 2482 |
| NcoI | CCATGG | 1 cut(s) | 1668 |
| NdeI | CATATG | 2 cut(s) | 1632, 1854 |
| NdeII | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| NmuCI | GTSAC | 6 cut(s) | 89, 316, 935, 1589, 1607, 2072 |
| NspI | RCATGY | 1 cut(s) | 943 |
| OliI | CACNNNNGTG | 1 cut(s) | 1170 |
| PagI | TCATGA | 2 cut(s) | 726, 1798 |
| PaqCI | CACCTGC | 1 cut(s) | 1620 |
| PceI | AGGCCT | 2 cut(s) | 440, 1374 |
| PciSI | GCTCTTC | 1 cut(s) | 2301 |
| PctI | GAATGC | 1 cut(s) | 241 |
| PdmI | GAANNNNTTC | 1 cut(s) | 34 |
| PfeI | GAWTC | 6 cut(s) | 35, 514, 578, 919, 1052, 2131 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2044 |
| PinAI | ACCGGT | 1 cut(s) | 106 |
| PleI | GAGTC | 7 cut(s) | 160, 331, 562, 1256, 1614, 2215, 2266 |
| PmaCI | CACGTG | 1 cut(s) | 750 |
| PmlI | CACGTG | 1 cut(s) | 750 |
| PpsI | GAGTC | 7 cut(s) | 160, 331, 562, 1256, 1614, 2215, 2266 |
| Ppu21I | YACGTR | 1 cut(s) | 750 |
| PpuMI | RGGWCCY | 1 cut(s) | 2187 |
| PshBI | ATTAAT | 1 cut(s) | 498 |
| PsiI | TTATAA | 2 cut(s) | 1308, 1659 |
| Psp124BI | GAGCTC | 2 cut(s) | 1875, 2313 |
| Psp5II | RGGWCCY | 1 cut(s) | 2187 |
| Psp6I | CCWGG | 4 cut(s) | 922, 1374, 2054, 2496 |
| PspCI | CACGTG | 1 cut(s) | 750 |
| PspFI | CCCAGC | 2 cut(s) | 2322, 2510 |
| PspGI | CCWGG | 4 cut(s) | 922, 1374, 2054, 2496 |
| PspOMI | GGGCCC | 2 cut(s) | 2015, 2058 |
| PspPPI | RGGWCCY | 1 cut(s) | 2187 |
| PstI | CTGCAG | 1 cut(s) | 1617 |
| PstNI | CAGNNNCTG | 5 cut(s) | 326, 463, 581, 617, 877 |
| PsuI | RGATCY | 3 cut(s) | 733, 882, 2470 |
| RsaI | GTAC | 6 cut(s) | 336, 347, 606, 1007, 1178, 2582 |
| RsaNI | GTAC | 6 cut(s) | 335, 346, 605, 1006, 1177, 2581 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1170 |
| SacI | GAGCTC | 2 cut(s) | 1875, 2313 |
| SapI | GCTCTTC | 1 cut(s) | 2301 |
| SaqAI | TTAA | 6 cut(s) | 132, 177, 351, 498, 774, 1863 |
| Sau3AI | GATC | 9 cut(s) | 589, 733, 744, 882, 1159, 1707, 2166, 2298, 2470 |
| SbfI | CCTGCAGG | 1 cut(s) | 1617 |
| SchI | GAGTC | 7 cut(s) | 161, 332, 563, 1257, 1615, 2215, 2266 |
| ScrFI | CCNGG | 4 cut(s) | 924, 1376, 2056, 2498 |
| SdaI | CCTGCAGG | 1 cut(s) | 1617 |
| SduI | GDGCHC | 4 cut(s) | 1875, 2019, 2062, 2313 |
| SfaNI | GCATC | 5 cut(s) | 394, 1318, 1897, 1933, 2142 |
| SfcI | CTRYAG | 2 cut(s) | 1613, 2439 |
| SinI | GGWCC | 7 cut(s) | 18, 1064, 1403, 1470, 2035, 2187, 2326 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1170 |
| SmlI | CTYRAG | 3 cut(s) | 299, 1985, 2156 |
| SmoI | CTYRAG | 3 cut(s) | 299, 1985, 2156 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1617 |
| Sse9I | AATT | 5 cut(s) | 585, 722, 770, 1340, 2101 |
| SseBI | AGGCCT | 2 cut(s) | 440, 1374 |
| SsiI | CCGC | 5 cut(s) | 196, 1401, 1441, 1978, 2460 |
| SspI | AATATT | 1 cut(s) | 1238 |
| SspMI | CTAG | 2 cut(s) | 738, 2147 |
| SstI | GAGCTC | 2 cut(s) | 1875, 2313 |
| StuI | AGGCCT | 2 cut(s) | 440, 1374 |
| StyD4I | CCNGG | 4 cut(s) | 922, 1374, 2054, 2496 |
| StyI | CCWWGG | 3 cut(s) | 435, 849, 1668 |
| TaaI | ACNGT | 6 cut(s) | 210, 220, 760, 935, 1021, 2369 |
| TaiI | ACGT | 4 cut(s) | 752, 954, 2341, 2361 |
| TaqI | TCGA | 2 cut(s) | 10, 1643 |
| TasI | AATT | 5 cut(s) | 585, 722, 770, 1340, 2101 |
| TatI | WGTACW | 2 cut(s) | 345, 1176 |
| TfiI | GAWTC | 6 cut(s) | 35, 514, 578, 919, 1052, 2131 |
| Tru1I | TTAA | 6 cut(s) | 132, 177, 351, 498, 774, 1863 |
| Tru9I | TTAA | 6 cut(s) | 132, 177, 351, 498, 774, 1863 |
| TscAI | CASTG | 3 cut(s) | 1157, 1717, 1890 |
| TseFI | GTSAC | 6 cut(s) | 89, 316, 935, 1589, 1607, 2072 |
| Tsp45I | GTSAC | 6 cut(s) | 89, 316, 935, 1589, 1607, 2072 |
| TspDTI | ATGAA | 9 cut(s) | 117, 219, 245, 257, 467, 715, 743, 1065, 2445 |
| TspRI | CASTG | 3 cut(s) | 1157, 1717, 1890 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2044 |
| VpaK11BI | GGWCC | 7 cut(s) | 18, 1064, 1403, 1470, 2035, 2187, 2326 |
| VspI | ATTAAT | 1 cut(s) | 498 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 2066, 2261 |
| XapI | RAATTY | 1 cut(s) | 770 |
| XbaI | TCTAGA | 1 cut(s) | 2146 |
| XceI | RCATGY | 1 cut(s) | 943 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 951, 1339 |
| XmnI | GAANNNNTTC | 1 cut(s) | 34 |
| XspI | CTAG | 2 cut(s) | 738, 2147 |