component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1275, 2193 |
| AarI | CACCTGC | 2 cut(s) | 1596, 2499 |
| Acc16I | TGCGCA | 1 cut(s) | 2682 |
| Acc36I | ACCTGC | 3 cut(s) | 1578, 1596, 2499 |
| AccB1I | GGYRCC | 1 cut(s) | 2552 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2020 |
| AccI | GTMKAC | 2 cut(s) | 222, 2708 |
| AccII | CGCG | 1 cut(s) | 1509 |
| AccIII | TCCGGA | 1 cut(s) | 517 |
| AciI | CCGC | 5 cut(s) | 107, 313, 1255, 2041, 2623 |
| AclWI | GGATC | 3 cut(s) | 323, 581, 594 |
| AcsI | RAATTY | 2 cut(s) | 11, 737 |
| AcuI | CTGAAG | 5 cut(s) | 143, 485, 716, 1710, 2086 |
| AdeI | CACNNNGTG | 1 cut(s) | 1754 |
| AfaI | GTAC | 6 cut(s) | 119, 336, 506, 1413, 2494, 2566 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1254, 1255, 2020, 2044, 2650 |
| AflIII | ACRYGT | 2 cut(s) | 916, 2312 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2589 |
| AjnI | CCWGG | 3 cut(s) | 384, 889, 1347 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 674, 706 |
| Alw21I | GWGCWC | 2 cut(s) | 1851, 2289 |
| Alw26I | GTCTC | 3 cut(s) | 1762, 2108, 2460 |
| AlwI | GGATC | 3 cut(s) | 323, 581, 594 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 463, 694, 1059 |
| Ama87I | CYCGRG | 1 cut(s) | 759 |
| Aor13HI | TCCGGA | 1 cut(s) | 517 |
| AoxI | GGCC | 8 cut(s) | 438, 1074, 1345, 1446, 1641, 2034, 2061, 2254 |
| ApoI | RAATTY | 2 cut(s) | 11, 737 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2155, 2187 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1146, 2099 |
| AspA2I | CCTAGG | 1 cut(s) | 2615 |
| AspLEI | GCGC | 3 cut(s) | 1511, 1929, 2683 |
| AsuC2I | CCSGG | 1 cut(s) | 2185 |
| AsuHPI | GGTGA | 8 cut(s) | 74, 98, 490, 1343, 1408, 1577, 2060, 2209 |
| AsuII | TTCGAA | 1 cut(s) | 1672 |
| AvaI | CYCGRG | 1 cut(s) | 759 |
| AvaII | GGWCC | 8 cut(s) | 700, 967, 1379, 1991, 2011, 2163, 2302, 2620 |
| AvrII | CCTAGG | 1 cut(s) | 2615 |
| AxyI | CCTNAGG | 1 cut(s) | 1250 |
| BaeGI | GKGCMC | 1 cut(s) | 906 |
| BamHI | GGATCC | 1 cut(s) | 586 |
| BanI | GGYRCC | 1 cut(s) | 2552 |
| BanII | GRGCYC | 2 cut(s) | 1851, 2289 |
| BauI | CACGAG | 1 cut(s) | 1563 |
| BbsI | GAAGAC | 5 cut(s) | 495, 1787, 1816, 2317, 2548 |
| Bbv12I | GWGCWC | 2 cut(s) | 1851, 2289 |
| BccI | CCATC | 4 cut(s) | 635, 1447, 1539, 2728 |
| BceAI | ACGGC | 1 cut(s) | 2681 |
| BciT130I | CCWGG | 3 cut(s) | 386, 891, 1349 |
| BciVI | GTATCC | 2 cut(s) | 715, 2731 |
| BclI | TGATCA | 3 cut(s) | 495, 1935, 2274 |
| BcnI | CCSGG | 1 cut(s) | 2185 |
| BcoDI | GTCTC | 3 cut(s) | 1762, 2108, 2460 |
| BfaI | CTAG | 5 cut(s) | 93, 1208, 2295, 2346, 2616 |
| BfmI | CTRYAG | 2 cut(s) | 591, 1356 |
| BfuAI | ACCTGC | 3 cut(s) | 1578, 1596, 2499 |
| BfuI | GTATCC | 2 cut(s) | 715, 2731 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2458 |
| BlnI | CCTAGG | 1 cut(s) | 2615 |
| BlpI | GCTNAGC | 1 cut(s) | 1314 |
| BmcAI | AGTACT | 1 cut(s) | 2494 |
| Bme1390I | CCNGG | 4 cut(s) | 386, 891, 1349, 2185 |
| Bme18I | GGWCC | 8 cut(s) | 700, 967, 1379, 1991, 2011, 2163, 2302, 2620 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2589 |
| BmeT110I | CYCGRG | 1 cut(s) | 759 |
| BmrFI | CCNGG | 4 cut(s) | 386, 891, 1349, 2185 |
| BmsI | GCATC | 6 cut(s) | 394, 1285, 1809, 2118, 2677, 2692 |
| BpiI | GAAGAC | 5 cut(s) | 495, 1787, 1816, 2317, 2548 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 373, 405 |
| BpmI | CTGGAG | 4 cut(s) | 1454, 1770, 1823, 2622 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1404, 1845 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1314 |
| Bpu14I | TTCGAA | 1 cut(s) | 1672 |
| BpuEI | CTTGAG | 7 cut(s) | 320, 866, 1266, 1874, 2117, 2144, 2520 |
| BpuMI | CCSGG | 1 cut(s) | 2185 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2273 |
| BsaJI | CCNNGG | 9 cut(s) | 435, 636, 889, 1415, 1644, 2031, 2456, 2615, 2644 |
| BsaWI | WCCGGW | 3 cut(s) | 77, 517, 776 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 2761 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1254, 1255, 2020, 2044, 2650 |
| Bse1I | ACTGG | 4 cut(s) | 1314, 2368, 2563, 2701 |
| Bse21I | CCTNAGG | 1 cut(s) | 1250 |
| Bse3DI | GCAATG | 3 cut(s) | 12, 1518, 2410 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2273 |
| BseAI | TCCGGA | 1 cut(s) | 517 |
| BseBI | CCWGG | 3 cut(s) | 386, 891, 1349 |
| BseDI | CCNNGG | 9 cut(s) | 435, 636, 889, 1415, 1644, 2031, 2456, 2615, 2644 |
| BseGI | GGATG | 9 cut(s) | 49, 163, 234, 409, 541, 616, 646, 997, 1911 |
| BseJI | GATNNNNATC | 1 cut(s) | 2273 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1254, 1255, 2020, 2044, 2650 |
| BseMI | GCAATG | 3 cut(s) | 12, 1518, 2410 |
| BseMII | CTCAG | 9 cut(s) | 35, 312, 887, 1241, 1305, 1395, 1836, 2150, 2744 |
| BseNI | ACTGG | 4 cut(s) | 1314, 2368, 2563, 2701 |
| BseRI | GAGGAG | 2 cut(s) | 62, 96 |
| BseSI | GKGCMC | 1 cut(s) | 906 |
| BsgI | GTGCAG | 1 cut(s) | 956 |
| Bsh1236I | CGCG | 1 cut(s) | 1509 |
| BshFI | GGCC | 8 cut(s) | 440, 1076, 1347, 1448, 1643, 2036, 2063, 2256 |
| BshNI | GGYRCC | 1 cut(s) | 2552 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1851, 2289 |
| BsiHKCI | CYCGRG | 1 cut(s) | 759 |
| BsiSI | CCGG | 4 cut(s) | 78, 518, 777, 2185 |
| BslFI | GGGAC | 6 cut(s) | 1060, 1977, 2024, 2315, 2633, 2667 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1254, 1255, 2020, 2044, 2650 |
| BsmAI | GTCTC | 3 cut(s) | 1762, 2108, 2460 |
| BsmFI | GGGAC | 6 cut(s) | 1060, 1977, 2024, 2315, 2633, 2667 |
| BsmI | GAATGC | 2 cut(s) | 217, 241 |
| BsnI | GGCC | 8 cut(s) | 440, 1076, 1347, 1448, 1643, 2036, 2063, 2256 |
| BsoBI | CYCGRG | 1 cut(s) | 759 |
| Bsp119I | TTCGAA | 1 cut(s) | 1672 |
| Bsp1286I | GDGCHC | 3 cut(s) | 906, 1851, 2289 |
| Bsp13I | TCCGGA | 1 cut(s) | 517 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1314 |
| Bsp19I | CCATGG | 1 cut(s) | 1644 |
| BspACI | CCGC | 5 cut(s) | 107, 313, 1255, 2041, 2623 |
| BspANI | GGCC | 8 cut(s) | 440, 1076, 1347, 1448, 1643, 2036, 2063, 2256 |
| BspCNI | CTCAG | 9 cut(s) | 34, 313, 886, 1242, 1306, 1396, 1837, 2151, 2743 |
| BspEI | TCCGGA | 1 cut(s) | 517 |
| BspFNI | CGCG | 1 cut(s) | 1509 |
| BspHI | TCATGA | 1 cut(s) | 1774 |
| BspMI | ACCTGC | 3 cut(s) | 1578, 1596, 2499 |
| BspPI | GGATC | 3 cut(s) | 323, 581, 594 |
| BspQI | GCTCTTC | 1 cut(s) | 1545 |
| BspT104I | TTCGAA | 1 cut(s) | 1672 |
| BspT107I | GGYRCC | 1 cut(s) | 2552 |
| BsrDI | GCAATG | 3 cut(s) | 12, 1518, 2410 |
| BsrI | ACTGG | 4 cut(s) | 1314, 2368, 2563, 2701 |
| BssECI | CCNNGG | 9 cut(s) | 435, 636, 889, 1415, 1644, 2031, 2456, 2615, 2644 |
| BssSI | CACGAG | 1 cut(s) | 1563 |
| BssT1I | CCWWGG | 6 cut(s) | 435, 636, 1644, 2031, 2456, 2615 |
| Bst2BI | CACGAG | 1 cut(s) | 1563 |
| Bst2UI | CCWGG | 3 cut(s) | 386, 891, 1349 |
| Bst4CI | ACNGT | 3 cut(s) | 220, 1956, 2119 |
| Bst6I | CTCTTC | 3 cut(s) | 525, 1545, 2105 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 943, 1244 |
| BstBI | TTCGAA | 1 cut(s) | 1672 |
| BstC8I | GCNNGC | 5 cut(s) | 266, 1115, 1507, 1746, 2355 |
| BstDSI | CCRYGG | 1 cut(s) | 1644 |
| BstEII | GGTNACC | 1 cut(s) | 1396 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2042 |
| BstF5I | GGATG | 9 cut(s) | 49, 163, 234, 409, 541, 616, 646, 997, 1911 |
| BstFNI | CGCG | 1 cut(s) | 1509 |
| BstHHI | GCGC | 3 cut(s) | 1511, 1929, 2683 |
| BstMAI | GTCTC | 3 cut(s) | 1762, 2108, 2460 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 943, 1119, 1244, 2033, 2262, 2458 |
| BstNI | CCWGG | 3 cut(s) | 386, 891, 1349 |
| BstNSI | RCATGY | 2 cut(s) | 910, 920 |
| BstPI | GGTNACC | 1 cut(s) | 1396 |
| BstSCI | CCNGG | 4 cut(s) | 384, 889, 1347, 2183 |
| BstSFI | CTRYAG | 2 cut(s) | 591, 1356 |
| BstSLI | GKGCMC | 1 cut(s) | 906 |
| BstUI | CGCG | 1 cut(s) | 1509 |
| BstV2I | GAAGAC | 5 cut(s) | 495, 1787, 1816, 2317, 2548 |
| BstX2I | RGATCY | 1 cut(s) | 586 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1885, 2480 |
| BstYI | RGATCY | 1 cut(s) | 586 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1250 |
| BsuI | GTATCC | 2 cut(s) | 715, 2731 |
| BsuRI | GGCC | 8 cut(s) | 440, 1076, 1347, 1448, 1643, 2036, 2063, 2256 |
| BtgI | CCRYGG | 1 cut(s) | 1644 |
| BtsCI | GGATG | 9 cut(s) | 49, 163, 234, 409, 541, 616, 646, 997, 1911 |
| BtsI | GCAGTG | 3 cut(s) | 1124, 1368, 1866 |
| BtsIMutI | CAGTG | 9 cut(s) | 189, 216, 318, 1124, 1368, 1686, 1866, 2373, 2556 |
| BveI | ACCTGC | 3 cut(s) | 1578, 1596, 2499 |
| Cac8I | GCNNGC | 5 cut(s) | 266, 1115, 1507, 1746, 2355 |
| CaiI | CAGNNNCTG | 3 cut(s) | 463, 694, 1059 |
| CciI | TCATGA | 1 cut(s) | 1774 |
| CfoI | GCGC | 3 cut(s) | 1511, 1929, 2683 |
| CseI | GACGC | 1 cut(s) | 594 |
| Csp6I | GTAC | 6 cut(s) | 118, 335, 505, 1412, 2493, 2565 |
| CviQI | GTAC | 6 cut(s) | 118, 335, 505, 1412, 2493, 2565 |
| DraIII | CACNNNGTG | 1 cut(s) | 1754 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2589 |
| Eam1104I | CTCTTC | 3 cut(s) | 525, 1545, 2105 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2589 |
| EarI | CTCTTC | 3 cut(s) | 525, 1545, 2105 |
| Ecl136II | GAGCTC | 2 cut(s) | 1849, 2287 |
| Eco130I | CCWWGG | 6 cut(s) | 435, 636, 1644, 2031, 2456, 2615 |
| Eco147I | AGGCCT | 1 cut(s) | 440 |
| Eco24I | GRGCYC | 2 cut(s) | 1851, 2289 |
| Eco32I | GATATC | 2 cut(s) | 1772, 2612 |
| Eco47I | GGWCC | 8 cut(s) | 700, 967, 1379, 1991, 2011, 2163, 2302, 2620 |
| Eco53kI | GAGCTC | 2 cut(s) | 1849, 2287 |
| Eco57I | CTGAAG | 5 cut(s) | 143, 485, 716, 1710, 2086 |
| Eco81I | CCTNAGG | 1 cut(s) | 1250 |
| Eco88I | CYCGRG | 1 cut(s) | 759 |
| Eco91I | GGTNACC | 1 cut(s) | 1396 |
| EcoICRI | GAGCTC | 2 cut(s) | 1849, 2287 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2042 |
| EcoO109I | RGGNCCY | 5 cut(s) | 700, 1446, 1991, 2035, 2163 |
| EcoO65I | GGTNACC | 1 cut(s) | 1396 |
| EcoRII | CCWGG | 3 cut(s) | 384, 889, 1347 |
| EcoRV | GATATC | 2 cut(s) | 1772, 2612 |
| EcoT14I | CCWWGG | 6 cut(s) | 435, 636, 1644, 2031, 2456, 2615 |
| EcoT38I | GRGCYC | 2 cut(s) | 1851, 2289 |
| ErhI | CCWWGG | 6 cut(s) | 435, 636, 1644, 2031, 2456, 2615 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2036, 2068 |
| FaqI | GGGAC | 6 cut(s) | 1060, 1977, 2024, 2315, 2633, 2667 |
| FauI | CCCGC | 1 cut(s) | 1248 |
| FauNDI | CATATG | 3 cut(s) | 133, 1830, 2587 |
| FbaI | TGATCA | 3 cut(s) | 495, 1935, 2274 |
| FblI | GTMKAC | 2 cut(s) | 222, 2708 |
| FokI | GGATG | 9 cut(s) | 56, 170, 241, 416, 548, 623, 653, 1004, 1898 |
| FriOI | GRGCYC | 2 cut(s) | 1851, 2289 |
| FspAI | RTGCGCAY | 1 cut(s) | 2682 |
| FspBI | CTAG | 5 cut(s) | 93, 1208, 2295, 2346, 2616 |
| FspI | TGCGCA | 1 cut(s) | 2682 |
| GlaI | GCGC | 3 cut(s) | 1510, 1928, 2682 |
| GsuI | CTGGAG | 4 cut(s) | 1454, 1770, 1823, 2622 |
| HaeIII | GGCC | 8 cut(s) | 440, 1076, 1347, 1448, 1643, 2036, 2063, 2256 |
| HapII | CCGG | 4 cut(s) | 78, 518, 777, 2185 |
| HgaI | GACGC | 1 cut(s) | 594 |
| HhaI | GCGC | 3 cut(s) | 1511, 1929, 2683 |
| Hin6I | GCGC | 3 cut(s) | 1509, 1927, 2681 |
| HinP1I | GCGC | 3 cut(s) | 1509, 1927, 2681 |
| HincII | GTYRAC | 2 cut(s) | 223, 886 |
| HindII | GTYRAC | 2 cut(s) | 223, 886 |
| HindIII | AAGCTT | 1 cut(s) | 842 |
| HpaII | CCGG | 4 cut(s) | 78, 518, 777, 2185 |
| HphI | GGTGA | 8 cut(s) | 74, 98, 490, 1343, 1408, 1577, 2060, 2209 |
| Hpy166II | GTNNAC | 6 cut(s) | 223, 886, 1291, 1727, 2373, 2709 |
| Hpy8I | GTNNAC | 6 cut(s) | 223, 886, 1291, 1727, 2373, 2709 |
| Hpy99I | CGWCG | 1 cut(s) | 610 |
| HpyCH4III | ACNGT | 3 cut(s) | 220, 1956, 2119 |
| HpyCH4IV | ACGT | 4 cut(s) | 1388, 2198, 2314, 2563 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 943, 1119, 1244, 2033, 2262, 2458 |
| HpySE526I | ACGT | 4 cut(s) | 1388, 2198, 2314, 2563 |
| HspAI | GCGC | 3 cut(s) | 1509, 1927, 2681 |
| Kpn2I | TCCGGA | 1 cut(s) | 517 |
| Ksp22I | TGATCA | 3 cut(s) | 495, 1935, 2274 |
| LguI | GCTCTTC | 1 cut(s) | 1545 |
| LmnI | GCTCC | 6 cut(s) | 520, 1003, 1031, 1351, 1854, 2292 |
| LweI | GCATC | 6 cut(s) | 394, 1285, 1809, 2118, 2677, 2692 |
| MaeI | CTAG | 5 cut(s) | 93, 1208, 2295, 2346, 2616 |
| MaeII | ACGT | 4 cut(s) | 1388, 2198, 2314, 2563 |
| MaeIII | GTNAC | 6 cut(s) | 1396, 1520, 1565, 1583, 2048, 2570 |
| MflI | RGATCY | 1 cut(s) | 586 |
| MhlI | GDGCHC | 3 cut(s) | 906, 1851, 2289 |
| MluCI | AATT | 6 cut(s) | 11, 69, 579, 726, 737, 2077 |
| MlyI | GAGTC | 4 cut(s) | 13, 332, 1591, 1777 |
| MmeI | TCCRAC | 3 cut(s) | 348, 588, 1198 |
| MroI | TCCGGA | 1 cut(s) | 517 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1146, 2099 |
| MseI | TTAA | 7 cut(s) | 351, 729, 1070, 1635, 2201, 2763, 2782 |
| MslI | CAYNNNNRTG | 6 cut(s) | 132, 986, 1137, 2222, 2334, 2478 |
| MspI | CCGG | 4 cut(s) | 78, 518, 777, 2185 |
| MspR9I | CCNGG | 4 cut(s) | 386, 891, 1349, 2185 |
| Mva1269I | GAATGC | 2 cut(s) | 217, 241 |
| MvaI | CCWGG | 3 cut(s) | 386, 891, 1349 |
| MvnI | CGCG | 1 cut(s) | 1509 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 943, 1119, 1244, 2033, 2262, 2458 |
| NciI | CCSGG | 1 cut(s) | 2185 |
| NcoI | CCATGG | 1 cut(s) | 1644 |
| NdeI | CATATG | 3 cut(s) | 133, 1830, 2587 |
| NmuCI | GTSAC | 5 cut(s) | 1396, 1520, 1565, 1583, 2048 |
| NsbI | TGCGCA | 1 cut(s) | 2682 |
| NspI | RCATGY | 2 cut(s) | 910, 920 |
| NspV | TTCGAA | 1 cut(s) | 1672 |
| PagI | TCATGA | 1 cut(s) | 1774 |
| PaqCI | CACCTGC | 2 cut(s) | 1596, 2499 |
| PceI | AGGCCT | 1 cut(s) | 440 |
| PciI | ACATGT | 1 cut(s) | 916 |
| PciSI | GCTCTTC | 1 cut(s) | 1545 |
| PctI | GAATGC | 2 cut(s) | 217, 241 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1146, 2099 |
| PfeI | GAWTC | 8 cut(s) | 35, 152, 514, 572, 632, 850, 1019, 2107 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2020 |
| PleI | GAGTC | 4 cut(s) | 13, 331, 1590, 1777 |
| PpsI | GAGTC | 4 cut(s) | 13, 331, 1590, 1777 |
| PpuMI | RGGWCCY | 3 cut(s) | 700, 1991, 2163 |
| PscI | ACATGT | 1 cut(s) | 916 |
| PsiI | TTATAA | 2 cut(s) | 1275, 2193 |
| Psp124BI | GAGCTC | 2 cut(s) | 1851, 2289 |
| Psp5II | RGGWCCY | 3 cut(s) | 700, 1991, 2163 |
| Psp6I | CCWGG | 3 cut(s) | 384, 889, 1347 |
| PspEI | GGTNACC | 1 cut(s) | 1396 |
| PspGI | CCWGG | 3 cut(s) | 384, 889, 1347 |
| PspPPI | RGGWCCY | 3 cut(s) | 700, 1991, 2163 |
| PstNI | CAGNNNCTG | 3 cut(s) | 463, 694, 1059 |
| PsuI | RGATCY | 1 cut(s) | 586 |
| RsaI | GTAC | 6 cut(s) | 119, 336, 506, 1413, 2494, 2566 |
| RsaNI | GTAC | 6 cut(s) | 118, 335, 505, 1412, 2493, 2565 |
| RseI | CAYNNNNRTG | 6 cut(s) | 132, 986, 1137, 2222, 2334, 2478 |
| SacI | GAGCTC | 2 cut(s) | 1851, 2289 |
| SalI | GTCGAC | 1 cut(s) | 221 |
| SapI | GCTCTTC | 1 cut(s) | 1545 |
| SaqAI | TTAA | 7 cut(s) | 351, 729, 1070, 1635, 2201, 2763, 2782 |
| ScaI | AGTACT | 1 cut(s) | 2494 |
| SchI | GAGTC | 4 cut(s) | 13, 332, 1591, 1777 |
| ScrFI | CCNGG | 4 cut(s) | 386, 891, 1349, 2185 |
| SduI | GDGCHC | 3 cut(s) | 906, 1851, 2289 |
| SfaNI | GCATC | 6 cut(s) | 394, 1285, 1809, 2118, 2677, 2692 |
| SfcI | CTRYAG | 2 cut(s) | 591, 1356 |
| SfuI | TTCGAA | 1 cut(s) | 1672 |
| SinI | GGWCC | 8 cut(s) | 700, 967, 1379, 1991, 2011, 2163, 2302, 2620 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 132, 986, 1137, 2222, 2334, 2478 |
| SmlI | CTYRAG | 7 cut(s) | 299, 845, 1281, 1853, 2123, 2132, 2535 |
| SmoI | CTYRAG | 7 cut(s) | 299, 845, 1281, 1853, 2123, 2132, 2535 |
| Sse9I | AATT | 6 cut(s) | 11, 69, 579, 726, 737, 2077 |
| SseBI | AGGCCT | 1 cut(s) | 440 |
| SsiI | CCGC | 5 cut(s) | 107, 313, 1255, 2041, 2623 |
| SspMI | CTAG | 5 cut(s) | 93, 1208, 2295, 2346, 2616 |
| SstI | GAGCTC | 2 cut(s) | 1851, 2289 |
| StuI | AGGCCT | 1 cut(s) | 440 |
| StyD4I | CCNGG | 4 cut(s) | 384, 889, 1347, 2183 |
| StyI | CCWWGG | 6 cut(s) | 435, 636, 1644, 2031, 2456, 2615 |
| TaaI | ACNGT | 3 cut(s) | 220, 1956, 2119 |
| TaiI | ACGT | 4 cut(s) | 1391, 2201, 2317, 2566 |
| TaqI | TCGA | 2 cut(s) | 222, 1672 |
| TasI | AATT | 6 cut(s) | 11, 69, 579, 726, 737, 2077 |
| TatI | WGTACW | 2 cut(s) | 504, 2492 |
| TfiI | GAWTC | 8 cut(s) | 35, 152, 514, 572, 632, 850, 1019, 2107 |
| Tru1I | TTAA | 7 cut(s) | 351, 729, 1070, 1635, 2201, 2763, 2782 |
| Tru9I | TTAA | 7 cut(s) | 351, 729, 1070, 1635, 2201, 2763, 2782 |
| TscAI | CASTG | 9 cut(s) | 189, 223, 325, 1124, 1368, 1693, 1866, 2380, 2563 |
| TseFI | GTSAC | 5 cut(s) | 1396, 1520, 1565, 1583, 2048 |
| Tsp45I | GTSAC | 5 cut(s) | 1396, 1520, 1565, 1583, 2048 |
| TspGWI | ACGGA | 1 cut(s) | 630 |
| TspRI | CASTG | 9 cut(s) | 189, 223, 325, 1124, 1368, 1693, 1866, 2380, 2563 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2020 |
| VpaK11BI | GGWCC | 8 cut(s) | 700, 967, 1379, 1991, 2011, 2163, 2302, 2620 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2042 |
| XapI | RAATTY | 2 cut(s) | 11, 737 |
| XbaI | TCTAGA | 1 cut(s) | 1207 |
| XceI | RCATGY | 2 cut(s) | 910, 920 |
| XmaJI | CCTAGG | 1 cut(s) | 2615 |
| XmiI | GTMKAC | 2 cut(s) | 222, 2708 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1146, 2099 |
| XspI | CTAG | 5 cut(s) | 93, 1208, 2295, 2346, 2616 |
| ZrmI | AGTACT | 1 cut(s) | 2494 |