component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1077, 1428 |
| AarI | CACCTGC | 1 cut(s) | 1389 |
| Acc36I | ACCTGC | 2 cut(s) | 583, 1389 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1813 |
| AccII | CGCG | 2 cut(s) | 87, 2559 |
| AciI | CCGC | 7 cut(s) | 1038, 1210, 1747, 2229, 2364, 2397, 2413 |
| AclWI | GGATC | 5 cut(s) | 356, 497, 510, 923, 2518 |
| AcoI | YGGCCR | 1 cut(s) | 2380 |
| AcsI | RAATTY | 1 cut(s) | 539 |
| AcuI | CTGAAG | 6 cut(s) | 257, 366, 390, 643, 1503, 1916 |
| AcvI | CACGTG | 1 cut(s) | 519 |
| AdeI | CACNNNGTG | 1 cut(s) | 1547 |
| AfaI | GTAC | 6 cut(s) | 108, 119, 378, 776, 947, 2350 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 439, 1813, 1837, 2032, 2139 |
| AflIII | ACRYGT | 1 cut(s) | 2105 |
| AgsI | TTSAA | 7 cut(s) | 217, 910, 953, 1001, 1030, 1064, 2320 |
| AjnI | CCWGG | 5 cut(s) | 691, 1143, 1823, 2265, 2426 |
| AleI | CACNNNNGTG | 1 cut(s) | 939 |
| Alw21I | GWGCWC | 2 cut(s) | 1644, 2082 |
| Alw26I | GTCTC | 7 cut(s) | 701, 1457, 1555, 1597, 2253, 2365, 2403 |
| AlwI | GGATC | 5 cut(s) | 356, 497, 510, 923, 2518 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 98, 235, 353, 389, 646 |
| AoxI | GGCC | 7 cut(s) | 210, 876, 1141, 1784, 1827, 2148, 2380 |
| ApaI | GGGCCC | 2 cut(s) | 1788, 1831 |
| ApoI | RAATTY | 1 cut(s) | 539 |
| AseI | ATTAAT | 1 cut(s) | 270 |
| AspLEI | GCGC | 2 cut(s) | 87, 2561 |
| AsuHPI | GGTGA | 4 cut(s) | 1148, 1316, 1370, 1853 |
| AvaII | GGWCC | 7 cut(s) | 833, 849, 1172, 1239, 1804, 1956, 2095 |
| AxyI | CCTNAGG | 1 cut(s) | 1052 |
| BaeGI | GKGCMC | 2 cut(s) | 1788, 1831 |
| BalI | TGGCCA | 1 cut(s) | 2382 |
| BamHI | GGATCC | 1 cut(s) | 502 |
| BanII | GRGCYC | 5 cut(s) | 810, 1644, 1788, 1831, 2082 |
| BauI | CACGAG | 4 cut(s) | 561, 939, 1167, 1299 |
| BbrPI | CACGTG | 1 cut(s) | 519 |
| BbsI | GAAGAC | 1 cut(s) | 635 |
| Bbv12I | GWGCWC | 2 cut(s) | 1644, 2082 |
| BccI | CCATC | 6 cut(s) | 413, 839, 1127, 1183, 1240, 2289 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 296, 330 |
| BciT130I | CCWGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| BciVI | GTATCC | 2 cut(s) | 517, 2512 |
| BclI | TGATCA | 2 cut(s) | 1476, 2067 |
| BcoDI | GTCTC | 7 cut(s) | 701, 1457, 1555, 1597, 2253, 2365, 2403 |
| BfaI | CTAG | 3 cut(s) | 507, 1916, 2406 |
| BfmI | CTRYAG | 2 cut(s) | 1382, 2208 |
| BfuAI | ACCTGC | 2 cut(s) | 583, 1389 |
| BfuI | GTATCC | 2 cut(s) | 517, 2512 |
| BglII | AGATCT | 2 cut(s) | 651, 2239 |
| BlpI | GCTNAGC | 1 cut(s) | 1116 |
| Bme1390I | CCNGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| Bme18I | GGWCC | 7 cut(s) | 833, 849, 1172, 1239, 1804, 1956, 2095 |
| BmiI | GGNNCC | 9 cut(s) | 504, 807, 850, 1149, 1786, 1787, 1805, 1829, 2096 |
| BmrFI | CCNGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| BmrI | ACTGGG | 2 cut(s) | 37, 588 |
| BmsI | GCATC | 6 cut(s) | 166, 1087, 1666, 1702, 1911, 2449 |
| BmuI | ACTGGG | 2 cut(s) | 37, 588 |
| BpiI | GAAGAC | 1 cut(s) | 635 |
| BpmI | CTGGAG | 4 cut(s) | 668, 1166, 1563, 2412 |
| Bpu10I | CCTNAGC | 4 cut(s) | 291, 1197, 1638, 2152 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1116 |
| BpuEI | CTTGAG | 3 cut(s) | 92, 1775, 1910 |
| BsaAI | YACGTR | 1 cut(s) | 519 |
| BsaBI | GATNNNNATC | 3 cut(s) | 687, 1320, 2066 |
| BsaI | GGTCTC | 3 cut(s) | 701, 1457, 2403 |
| BsaJI | CCNNGG | 5 cut(s) | 207, 618, 1437, 1824, 2427 |
| BsaWI | WCCGGW | 1 cut(s) | 1156 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 439, 1813, 1837, 2032, 2139 |
| Bse1I | ACTGG | 5 cut(s) | 32, 583, 2161, 2440, 2491 |
| Bse21I | CCTNAGG | 1 cut(s) | 1052 |
| Bse3DI | GCAATG | 2 cut(s) | 1311, 2203 |
| Bse8I | GATNNNNATC | 3 cut(s) | 687, 1320, 2066 |
| BseBI | CCWGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| BseDI | CCNNGG | 5 cut(s) | 207, 618, 1437, 1824, 2427 |
| BseGI | GGATG | 5 cut(s) | 181, 337, 970, 1288, 1345 |
| BseJI | GATNNNNATC | 3 cut(s) | 687, 1320, 2066 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 439, 1813, 1837, 2032, 2139 |
| BseMI | GCAATG | 2 cut(s) | 1311, 2203 |
| BseNI | ACTGG | 5 cut(s) | 32, 583, 2161, 2440, 2491 |
| BseRI | GAGGAG | 3 cut(s) | 338, 455, 1615 |
| BseSI | GKGCMC | 2 cut(s) | 1788, 1831 |
| BseYI | CCCAGC | 2 cut(s) | 2091, 2279 |
| BsgI | GTGCAG | 4 cut(s) | 336, 621, 758, 791 |
| Bsh1236I | CGCG | 2 cut(s) | 87, 2559 |
| BshFI | GGCC | 7 cut(s) | 212, 878, 1143, 1786, 1829, 2150, 2382 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1644, 2082 |
| BsiSI | CCGG | 1 cut(s) | 1157 |
| BslFI | GGGAC | 3 cut(s) | 862, 1817, 2108 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 439, 1813, 1837, 2032, 2139 |
| BsmAI | GTCTC | 7 cut(s) | 701, 1457, 1555, 1597, 2253, 2365, 2403 |
| BsmBI | CGTCTC | 1 cut(s) | 1597 |
| BsmFI | GGGAC | 3 cut(s) | 862, 1817, 2108 |
| BsmI | GAATGC | 1 cut(s) | 13 |
| BsnI | GGCC | 7 cut(s) | 212, 878, 1143, 1786, 1829, 2150, 2382 |
| Bso31I | GGTCTC | 3 cut(s) | 701, 1457, 2403 |
| Bsp120I | GGGCCC | 2 cut(s) | 1784, 1827 |
| Bsp1286I | GDGCHC | 5 cut(s) | 810, 1644, 1788, 1831, 2082 |
| Bsp1407I | TGTACA | 1 cut(s) | 117 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1116 |
| Bsp19I | CCATGG | 1 cut(s) | 1437 |
| BspACI | CCGC | 7 cut(s) | 1038, 1210, 1747, 2229, 2364, 2397, 2413 |
| BspANI | GGCC | 7 cut(s) | 212, 878, 1143, 1786, 1829, 2150, 2382 |
| BspFNI | CGCG | 2 cut(s) | 87, 2559 |
| BspHI | TCATGA | 2 cut(s) | 495, 1567 |
| BspLI | GGNNCC | 9 cut(s) | 504, 807, 850, 1149, 1786, 1787, 1805, 1829, 2096 |
| BspMAI | CTGCAG | 1 cut(s) | 1386 |
| BspMI | ACCTGC | 2 cut(s) | 583, 1389 |
| BspPI | GGATC | 5 cut(s) | 356, 497, 510, 923, 2518 |
| BspQI | GCTCTTC | 1 cut(s) | 2070 |
| BspTNI | GGTCTC | 3 cut(s) | 701, 1457, 2403 |
| BsrDI | GCAATG | 2 cut(s) | 1311, 2203 |
| BsrGI | TGTACA | 1 cut(s) | 117 |
| BsrI | ACTGG | 5 cut(s) | 32, 583, 2161, 2440, 2491 |
| BssECI | CCNNGG | 5 cut(s) | 207, 618, 1437, 1824, 2427 |
| BssSI | CACGAG | 4 cut(s) | 561, 939, 1167, 1299 |
| BssT1I | CCWWGG | 3 cut(s) | 207, 618, 1437 |
| Bst2BI | CACGAG | 4 cut(s) | 561, 939, 1167, 1299 |
| Bst2UI | CCWGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| Bst4CI | ACNGT | 4 cut(s) | 529, 704, 790, 2138 |
| Bst6I | CTCTTC | 4 cut(s) | 315, 1516, 1938, 2070 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 745 |
| BstAUI | TGTACA | 1 cut(s) | 117 |
| BstBAI | YACGTR | 1 cut(s) | 519 |
| BstC8I | GCNNGC | 7 cut(s) | 38, 449, 917, 1539, 2089, 2148, 2473 |
| BstDSI | CCRYGG | 1 cut(s) | 1437 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1835, 2030 |
| BstF5I | GGATG | 5 cut(s) | 181, 337, 970, 1288, 1345 |
| BstFNI | CGCG | 2 cut(s) | 87, 2559 |
| BstHHI | GCGC | 2 cut(s) | 87, 2561 |
| BstMAI | GTCTC | 7 cut(s) | 701, 1457, 1555, 1597, 2253, 2365, 2403 |
| BstNI | CCWGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| BstNSI | RCATGY | 1 cut(s) | 712 |
| BstSCI | CCNGG | 5 cut(s) | 691, 1143, 1823, 2265, 2426 |
| BstSFI | CTRYAG | 2 cut(s) | 1382, 2208 |
| BstSLI | GKGCMC | 2 cut(s) | 1788, 1831 |
| BstUI | CGCG | 2 cut(s) | 87, 2559 |
| BstV2I | GAAGAC | 1 cut(s) | 635 |
| BstX2I | RGATCY | 4 cut(s) | 502, 651, 2239, 2510 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1678, 2390 |
| BstYI | RGATCY | 4 cut(s) | 502, 651, 2239, 2510 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1052 |
| BsuI | GTATCC | 2 cut(s) | 517, 2512 |
| BsuRI | GGCC | 7 cut(s) | 212, 878, 1143, 1786, 1829, 2150, 2382 |
| BtgI | CCRYGG | 1 cut(s) | 1437 |
| BtsCI | GGATG | 5 cut(s) | 181, 337, 970, 1288, 1345 |
| BtsI | GCAGTG | 2 cut(s) | 926, 1659 |
| BtsIMutI | CAGTG | 4 cut(s) | 534, 926, 1479, 1659 |
| BveI | ACCTGC | 2 cut(s) | 583, 1389 |
| Cac8I | GCNNGC | 7 cut(s) | 38, 449, 917, 1539, 2089, 2148, 2473 |
| CaiI | CAGNNNCTG | 5 cut(s) | 98, 235, 353, 389, 646 |
| CciI | TCATGA | 2 cut(s) | 495, 1567 |
| CfoI | GCGC | 2 cut(s) | 87, 2561 |
| Csp6I | GTAC | 6 cut(s) | 107, 118, 377, 775, 946, 2349 |
| CviQI | GTAC | 6 cut(s) | 107, 118, 377, 775, 946, 2349 |
| DraIII | CACNNNGTG | 1 cut(s) | 1547 |
| EaeI | YGGCCR | 1 cut(s) | 2380 |
| Eam1104I | CTCTTC | 4 cut(s) | 315, 1516, 1938, 2070 |
| EarI | CTCTTC | 4 cut(s) | 315, 1516, 1938, 2070 |
| Ecl136II | GAGCTC | 2 cut(s) | 1642, 2080 |
| Eco130I | CCWWGG | 3 cut(s) | 207, 618, 1437 |
| Eco147I | AGGCCT | 3 cut(s) | 212, 1143, 2150 |
| Eco24I | GRGCYC | 5 cut(s) | 810, 1644, 1788, 1831, 2082 |
| Eco31I | GGTCTC | 3 cut(s) | 701, 1457, 2403 |
| Eco32I | GATATC | 3 cut(s) | 1318, 1565, 2453 |
| Eco47I | GGWCC | 7 cut(s) | 833, 849, 1172, 1239, 1804, 1956, 2095 |
| Eco53kI | GAGCTC | 2 cut(s) | 1642, 2080 |
| Eco57I | CTGAAG | 6 cut(s) | 257, 366, 390, 643, 1503, 1916 |
| Eco72I | CACGTG | 1 cut(s) | 519 |
| Eco81I | CCTNAGG | 1 cut(s) | 1052 |
| EcoICRI | GAGCTC | 2 cut(s) | 1642, 2080 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1835, 2030 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1784, 1785, 1827, 1828, 1956 |
| EcoRII | CCWGG | 5 cut(s) | 691, 1143, 1823, 2265, 2426 |
| EcoRV | GATATC | 3 cut(s) | 1318, 1565, 2453 |
| EcoT14I | CCWWGG | 3 cut(s) | 207, 618, 1437 |
| EcoT38I | GRGCYC | 5 cut(s) | 810, 1644, 1788, 1831, 2082 |
| ErhI | CCWWGG | 3 cut(s) | 207, 618, 1437 |
| Esp3I | CGTCTC | 1 cut(s) | 1597 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 741, 773, 1829, 1861, 2067, 2099 |
| FaqI | GGGAC | 3 cut(s) | 862, 1817, 2108 |
| FauI | CCCGC | 2 cut(s) | 1217, 2390 |
| FauNDI | CATATG | 3 cut(s) | 1401, 1623, 2467 |
| FbaI | TGATCA | 2 cut(s) | 1476, 2067 |
| FokI | GGATG | 5 cut(s) | 188, 344, 977, 1295, 1352 |
| FriOI | GRGCYC | 5 cut(s) | 810, 1644, 1788, 1831, 2082 |
| FspBI | CTAG | 3 cut(s) | 507, 1916, 2406 |
| GlaI | GCGC | 2 cut(s) | 86, 2560 |
| GsaI | CCCAGC | 2 cut(s) | 2095, 2283 |
| GsuI | CTGGAG | 4 cut(s) | 668, 1166, 1563, 2412 |
| HaeIII | GGCC | 7 cut(s) | 212, 878, 1143, 1786, 1829, 2150, 2382 |
| HapII | CCGG | 1 cut(s) | 1157 |
| HhaI | GCGC | 2 cut(s) | 87, 2561 |
| Hin6I | GCGC | 2 cut(s) | 85, 2559 |
| HinP1I | GCGC | 2 cut(s) | 85, 2559 |
| HincII | GTYRAC | 1 cut(s) | 2166 |
| HindII | GTYRAC | 1 cut(s) | 2166 |
| HindIII | AAGCTT | 1 cut(s) | 1889 |
| HpaII | CCGG | 1 cut(s) | 1157 |
| HphI | GGTGA | 4 cut(s) | 1148, 1316, 1370, 1853 |
| Hpy166II | GTNNAC | 2 cut(s) | 532, 2166 |
| Hpy8I | GTNNAC | 2 cut(s) | 532, 2166 |
| HpyAV | CCTTC | 8 cut(s) | 70, 390, 493, 561, 565, 619, 1133, 1478 |
| HpyCH4III | ACNGT | 4 cut(s) | 529, 704, 790, 2138 |
| HpyCH4IV | ACGT | 3 cut(s) | 518, 2107, 2127 |
| HpySE526I | ACGT | 3 cut(s) | 518, 2107, 2127 |
| HspAI | GCGC | 2 cut(s) | 85, 2559 |
| Ksp22I | TGATCA | 2 cut(s) | 1476, 2067 |
| LguI | GCTCTTC | 1 cut(s) | 2070 |
| LmnI | GCTCC | 3 cut(s) | 805, 1147, 2085 |
| LweI | GCATC | 6 cut(s) | 166, 1087, 1666, 1702, 1911, 2449 |
| MaeI | CTAG | 3 cut(s) | 507, 1916, 2406 |
| MaeII | ACGT | 3 cut(s) | 518, 2107, 2127 |
| MaeIII | GTNAC | 6 cut(s) | 88, 343, 704, 1358, 1376, 1841 |
| MflI | RGATCY | 4 cut(s) | 502, 651, 2239, 2510 |
| MhlI | GDGCHC | 5 cut(s) | 810, 1644, 1788, 1831, 2082 |
| MlsI | TGGCCA | 1 cut(s) | 2382 |
| MluCI | AATT | 5 cut(s) | 357, 491, 539, 1109, 1870 |
| MluNI | TGGCCA | 1 cut(s) | 2382 |
| MlyI | GAGTC | 6 cut(s) | 104, 335, 1026, 1384, 1984, 2035 |
| MmeI | TCCRAC | 3 cut(s) | 120, 309, 1575 |
| Mox20I | TGGCCA | 1 cut(s) | 2382 |
| MscI | TGGCCA | 1 cut(s) | 2382 |
| MseI | TTAA | 4 cut(s) | 123, 270, 543, 1632 |
| MslI | CAYNNNNRTG | 1 cut(s) | 939 |
| Msp20I | TGGCCA | 1 cut(s) | 2382 |
| MspA1I | CMGCKG | 2 cut(s) | 2364, 2501 |
| MspI | CCGG | 1 cut(s) | 1157 |
| MspR9I | CCNGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| Mva1269I | GAATGC | 1 cut(s) | 13 |
| MvaI | CCWGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| MvnI | CGCG | 2 cut(s) | 87, 2559 |
| NcoI | CCATGG | 1 cut(s) | 1437 |
| NdeI | CATATG | 3 cut(s) | 1401, 1623, 2467 |
| NlaIV | GGNNCC | 9 cut(s) | 504, 807, 850, 1149, 1786, 1787, 1805, 1829, 2096 |
| NmuCI | GTSAC | 4 cut(s) | 704, 1358, 1376, 1841 |
| NspI | RCATGY | 1 cut(s) | 712 |
| OliI | CACNNNNGTG | 1 cut(s) | 939 |
| PagI | TCATGA | 2 cut(s) | 495, 1567 |
| PaqCI | CACCTGC | 1 cut(s) | 1389 |
| PceI | AGGCCT | 3 cut(s) | 212, 1143, 2150 |
| PciSI | GCTCTTC | 1 cut(s) | 2070 |
| PctI | GAATGC | 1 cut(s) | 13 |
| PfeI | GAWTC | 5 cut(s) | 286, 350, 688, 821, 1900 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1813 |
| PleI | GAGTC | 6 cut(s) | 103, 334, 1025, 1383, 1984, 2035 |
| PmaCI | CACGTG | 1 cut(s) | 519 |
| PmlI | CACGTG | 1 cut(s) | 519 |
| PpsI | GAGTC | 6 cut(s) | 103, 334, 1025, 1383, 1984, 2035 |
| Ppu21I | YACGTR | 1 cut(s) | 519 |
| PpuMI | RGGWCCY | 1 cut(s) | 1956 |
| PshBI | ATTAAT | 1 cut(s) | 270 |
| PsiI | TTATAA | 2 cut(s) | 1077, 1428 |
| Psp124BI | GAGCTC | 2 cut(s) | 1644, 2082 |
| Psp5II | RGGWCCY | 1 cut(s) | 1956 |
| Psp6I | CCWGG | 5 cut(s) | 691, 1143, 1823, 2265, 2426 |
| PspCI | CACGTG | 1 cut(s) | 519 |
| PspFI | CCCAGC | 2 cut(s) | 2091, 2279 |
| PspGI | CCWGG | 5 cut(s) | 691, 1143, 1823, 2265, 2426 |
| PspN4I | GGNNCC | 9 cut(s) | 504, 807, 850, 1149, 1786, 1787, 1805, 1829, 2096 |
| PspOMI | GGGCCC | 2 cut(s) | 1784, 1827 |
| PspPPI | RGGWCCY | 1 cut(s) | 1956 |
| PstI | CTGCAG | 1 cut(s) | 1386 |
| PstNI | CAGNNNCTG | 5 cut(s) | 98, 235, 353, 389, 646 |
| PsuI | RGATCY | 4 cut(s) | 502, 651, 2239, 2510 |
| PvuII | CAGCTG | 1 cut(s) | 2501 |
| RsaI | GTAC | 6 cut(s) | 108, 119, 378, 776, 947, 2350 |
| RsaNI | GTAC | 6 cut(s) | 107, 118, 377, 775, 946, 2349 |
| RseI | CAYNNNNRTG | 1 cut(s) | 939 |
| SacI | GAGCTC | 2 cut(s) | 1644, 2082 |
| SapI | GCTCTTC | 1 cut(s) | 2070 |
| SaqAI | TTAA | 4 cut(s) | 123, 270, 543, 1632 |
| SbfI | CCTGCAGG | 1 cut(s) | 1386 |
| SchI | GAGTC | 6 cut(s) | 104, 335, 1026, 1384, 1984, 2035 |
| ScrFI | CCNGG | 5 cut(s) | 693, 1145, 1825, 2267, 2428 |
| SdaI | CCTGCAGG | 1 cut(s) | 1386 |
| SduI | GDGCHC | 5 cut(s) | 810, 1644, 1788, 1831, 2082 |
| SfaNI | GCATC | 6 cut(s) | 166, 1087, 1666, 1702, 1911, 2449 |
| SfcI | CTRYAG | 2 cut(s) | 1382, 2208 |
| SinI | GGWCC | 7 cut(s) | 833, 849, 1172, 1239, 1804, 1956, 2095 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 939 |
| SmlI | CTYRAG | 3 cut(s) | 71, 1754, 1925 |
| SmoI | CTYRAG | 3 cut(s) | 71, 1754, 1925 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1386 |
| Sse9I | AATT | 5 cut(s) | 357, 491, 539, 1109, 1870 |
| SseBI | AGGCCT | 3 cut(s) | 212, 1143, 2150 |
| SsiI | CCGC | 7 cut(s) | 1038, 1210, 1747, 2229, 2364, 2397, 2413 |
| SspI | AATATT | 1 cut(s) | 1007 |
| SspMI | CTAG | 3 cut(s) | 507, 1916, 2406 |
| SstI | GAGCTC | 2 cut(s) | 1644, 2082 |
| StuI | AGGCCT | 3 cut(s) | 212, 1143, 2150 |
| StyD4I | CCNGG | 5 cut(s) | 691, 1143, 1823, 2265, 2426 |
| StyI | CCWWGG | 3 cut(s) | 207, 618, 1437 |
| TaaI | ACNGT | 4 cut(s) | 529, 704, 790, 2138 |
| TaiI | ACGT | 3 cut(s) | 521, 2110, 2130 |
| TaqI | TCGA | 2 cut(s) | 1412, 2449 |
| TasI | AATT | 5 cut(s) | 357, 491, 539, 1109, 1870 |
| TatI | WGTACW | 2 cut(s) | 117, 945 |
| TauI | GCSGC | 1 cut(s) | 1040 |
| TfiI | GAWTC | 5 cut(s) | 286, 350, 688, 821, 1900 |
| Tru1I | TTAA | 4 cut(s) | 123, 270, 543, 1632 |
| Tru9I | TTAA | 4 cut(s) | 123, 270, 543, 1632 |
| TscAI | CASTG | 4 cut(s) | 534, 926, 1486, 1659 |
| TseFI | GTSAC | 4 cut(s) | 704, 1358, 1376, 1841 |
| Tsp45I | GTSAC | 4 cut(s) | 704, 1358, 1376, 1841 |
| TspDTI | ATGAA | 8 cut(s) | 17, 29, 239, 484, 512, 834, 2214, 2514 |
| TspRI | CASTG | 4 cut(s) | 534, 926, 1486, 1659 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1813 |
| VpaK11BI | GGWCC | 7 cut(s) | 833, 849, 1172, 1239, 1804, 1956, 2095 |
| VspI | ATTAAT | 1 cut(s) | 270 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1835, 2030 |
| XapI | RAATTY | 1 cut(s) | 539 |
| XbaI | TCTAGA | 2 cut(s) | 1915, 2405 |
| XceI | RCATGY | 1 cut(s) | 712 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 720, 1108 |
| XspI | CTAG | 3 cut(s) | 507, 1916, 2406 |