component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1011 |
| AarI | CACCTGC | 2 cut(s) | 1542, 2424 |
| Acc16I | TGCGCA | 2 cut(s) | 885, 2541 |
| Acc36I | ACCTGC | 4 cut(s) | 1216, 1378, 1542, 2424 |
| Acc65I | GGTACC | 2 cut(s) | 328, 2477 |
| AccB1I | GGYRCC | 2 cut(s) | 328, 2477 |
| AccI | GTMKAC | 1 cut(s) | 2378 |
| AccII | CGCG | 1 cut(s) | 309 |
| AciI | CCGC | 3 cut(s) | 28, 1043, 2078 |
| AclWI | GGATC | 1 cut(s) | 2599 |
| AcoI | YGGCCR | 1 cut(s) | 25 |
| AcsI | RAATTY | 2 cut(s) | 17, 1162 |
| AcuI | CTGAAG | 3 cut(s) | 479, 585, 1656 |
| AcyI | GRCGYC | 1 cut(s) | 1701 |
| AfaI | GTAC | 9 cut(s) | 330, 341, 500, 1115, 1359, 1797, 2419, 2479, 2491 |
| AfeI | AGCGCT | 1 cut(s) | 351 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 685, 1225 |
| AflIII | ACRYGT | 1 cut(s) | 2148 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1700, 2514 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1562, 1594 |
| Alw21I | GWGCWC | 5 cut(s) | 75, 1356, 1785, 2214, 2268 |
| Alw26I | GTCTC | 7 cut(s) | 869, 1360, 1417, 1708, 1751, 1929, 2385 |
| AlwI | GGATC | 1 cut(s) | 2599 |
| Aor51HI | AGCGCT | 1 cut(s) | 351 |
| AoxI | GGCC | 6 cut(s) | 25, 432, 1392, 1754, 1959, 2166 |
| ApoI | RAATTY | 2 cut(s) | 17, 1162 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1236, 2419 |
| Asp718I | GGTACC | 2 cut(s) | 328, 2477 |
| AspLEI | GCGC | 4 cut(s) | 309, 352, 886, 2542 |
| AspS9I | GGNCC | 7 cut(s) | 85, 1392, 1755, 1916, 1960, 2088, 2227 |
| AsuC2I | CCSGG | 2 cut(s) | 89, 177 |
| AsuHPI | GGTGA | 7 cut(s) | 265, 313, 1322, 1523, 1879, 1985, 2449 |
| AsuII | TTCGAA | 2 cut(s) | 14, 1618 |
| AvaII | GGWCC | 4 cut(s) | 85, 1916, 2088, 2227 |
| AxyI | CCTNAGG | 2 cut(s) | 1220, 2027 |
| BanI | GGYRCC | 2 cut(s) | 328, 2477 |
| BanII | GRGCYC | 3 cut(s) | 1356, 1785, 2214 |
| BauI | CACGAG | 1 cut(s) | 1452 |
| BbsI | GAAGAC | 1 cut(s) | 2473 |
| Bbv12I | GWGCWC | 5 cut(s) | 75, 1356, 1785, 2214, 2268 |
| BccI | CCATC | 6 cut(s) | 104, 605, 750, 1393, 1549, 2119 |
| BciVI | GTATCC | 2 cut(s) | 85, 2596 |
| BclI | TGATCA | 2 cut(s) | 1998, 2196 |
| BcnI | CCSGG | 2 cut(s) | 89, 177 |
| BcoDI | GTCTC | 7 cut(s) | 869, 1360, 1417, 1708, 1751, 1929, 2385 |
| BfaI | CTAG | 9 cut(s) | 386, 767, 935, 1061, 1280, 1787, 2271, 2285, 2484 |
| BfmI | CTRYAG | 2 cut(s) | 513, 1817 |
| BfoI | RGCGCY | 1 cut(s) | 353 |
| BfuAI | ACCTGC | 4 cut(s) | 1216, 1378, 1542, 2424 |
| BfuI | GTATCC | 2 cut(s) | 85, 2596 |
| BlpI | GCTNAGC | 2 cut(s) | 186, 1284 |
| BmcAI | AGTACT | 1 cut(s) | 2419 |
| Bme1390I | CCNGG | 2 cut(s) | 89, 177 |
| Bme18I | GGWCC | 4 cut(s) | 85, 1916, 2088, 2227 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1700, 2514 |
| BmgT120I | GGNCC | 7 cut(s) | 85, 1392, 1755, 1916, 1960, 2088, 2227 |
| BmiI | GGNNCC | 3 cut(s) | 87, 330, 2479 |
| BmrFI | CCNGG | 2 cut(s) | 89, 177 |
| BmsI | GCATC | 6 cut(s) | 294, 388, 847, 1255, 2043, 2524 |
| BoxI | GACNNNNGTC | 1 cut(s) | 681 |
| BpiI | GAAGAC | 1 cut(s) | 2473 |
| BpmI | CTGGAG | 2 cut(s) | 1733, 2069 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1350 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 186, 1284 |
| Bpu14I | TTCGAA | 2 cut(s) | 14, 1618 |
| BpuEI | CTTGAG | 5 cut(s) | 314, 842, 1236, 1799, 1916 |
| BpuMI | CCSGG | 2 cut(s) | 89, 177 |
| BsaAI | YACGTR | 1 cut(s) | 121 |
| BsaHI | GRCGYC | 1 cut(s) | 1701 |
| BsaI | GGTCTC | 3 cut(s) | 869, 1360, 1929 |
| BsaJI | CCNNGG | 5 cut(s) | 176, 429, 868, 2169, 2461 |
| BsaWI | WCCGGW | 1 cut(s) | 1884 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 685, 1225 |
| Bse1I | ACTGG | 2 cut(s) | 325, 2293 |
| Bse21I | CCTNAGG | 2 cut(s) | 1220, 2027 |
| Bse3DI | GCAATG | 2 cut(s) | 1464, 2335 |
| BseDI | CCNNGG | 5 cut(s) | 176, 429, 868, 2169, 2461 |
| BseGI | GGATG | 4 cut(s) | 403, 616, 1565, 2111 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 685, 1225 |
| BseMI | GCAATG | 2 cut(s) | 1464, 2335 |
| BseMII | CTCAG | 7 cut(s) | 1007, 1172, 1275, 1341, 2041, 2075, 2175 |
| BseNI | ACTGG | 2 cut(s) | 325, 2293 |
| BseRI | GAGGAG | 3 cut(s) | 212, 380, 2015 |
| BseYI | CCCAGC | 1 cut(s) | 947 |
| BsgI | GTGCAG | 1 cut(s) | 795 |
| Bsh1236I | CGCG | 1 cut(s) | 309 |
| BshFI | GGCC | 6 cut(s) | 27, 434, 1394, 1756, 1961, 2168 |
| BshNI | GGYRCC | 2 cut(s) | 328, 2477 |
| BsiHKAI | GWGCWC | 5 cut(s) | 75, 1356, 1785, 2214, 2268 |
| BsiSI | CCGG | 3 cut(s) | 89, 176, 1885 |
| BsiWI | CGTACG | 1 cut(s) | 1357 |
| BslFI | GGGAC | 1 cut(s) | 1030 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 685, 1225 |
| BsmAI | GTCTC | 7 cut(s) | 869, 1360, 1417, 1708, 1751, 1929, 2385 |
| BsmBI | CGTCTC | 1 cut(s) | 1708 |
| BsmFI | GGGAC | 1 cut(s) | 1030 |
| BsmI | GAATGC | 2 cut(s) | 951, 1880 |
| BsnI | GGCC | 6 cut(s) | 27, 434, 1394, 1756, 1961, 2168 |
| Bso31I | GGTCTC | 3 cut(s) | 869, 1360, 1929 |
| Bsp119I | TTCGAA | 2 cut(s) | 14, 1618 |
| Bsp1286I | GDGCHC | 5 cut(s) | 75, 1356, 1785, 2214, 2268 |
| Bsp1407I | TGTACA | 1 cut(s) | 339 |
| Bsp143I | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 186, 1284 |
| Bsp19I | CCATGG | 1 cut(s) | 868 |
| BspACI | CCGC | 3 cut(s) | 28, 1043, 2078 |
| BspANI | GGCC | 6 cut(s) | 27, 434, 1394, 1756, 1961, 2168 |
| BspCNI | CTCAG | 7 cut(s) | 1006, 1171, 1276, 1342, 2040, 2076, 2174 |
| BspFNI | CGCG | 1 cut(s) | 309 |
| BspHI | TCATGA | 3 cut(s) | 669, 2199, 2254 |
| BspLI | GGNNCC | 3 cut(s) | 87, 330, 2479 |
| BspMAI | CTGCAG | 1 cut(s) | 1821 |
| BspMI | ACCTGC | 4 cut(s) | 1216, 1378, 1542, 2424 |
| BspPI | GGATC | 1 cut(s) | 2599 |
| BspQI | GCTCTTC | 1 cut(s) | 2202 |
| BspT104I | TTCGAA | 2 cut(s) | 14, 1618 |
| BspT107I | GGYRCC | 2 cut(s) | 328, 2477 |
| BspTNI | GGTCTC | 3 cut(s) | 869, 1360, 1929 |
| BsrDI | GCAATG | 2 cut(s) | 1464, 2335 |
| BsrGI | TGTACA | 1 cut(s) | 339 |
| BsrI | ACTGG | 2 cut(s) | 325, 2293 |
| BssECI | CCNNGG | 5 cut(s) | 176, 429, 868, 2169, 2461 |
| BssMI | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| BssNI | GRCGYC | 1 cut(s) | 1701 |
| BssSI | CACGAG | 1 cut(s) | 1452 |
| BssT1I | CCWWGG | 4 cut(s) | 429, 868, 2169, 2461 |
| Bst2BI | CACGAG | 1 cut(s) | 1452 |
| Bst4CI | ACNGT | 3 cut(s) | 557, 703, 1930 |
| Bst6I | CTCTTC | 5 cut(s) | 516, 528, 632, 2013, 2202 |
| BstACI | GRCGYC | 1 cut(s) | 1701 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 913, 1825 |
| BstAUI | TGTACA | 1 cut(s) | 339 |
| BstBAI | YACGTR | 1 cut(s) | 121 |
| BstBI | TTCGAA | 2 cut(s) | 14, 1618 |
| BstC8I | GCNNGC | 4 cut(s) | 260, 882, 1085, 2280 |
| BstDSI | CCRYGG | 1 cut(s) | 868 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1223 |
| BstF5I | GGATG | 4 cut(s) | 403, 616, 1565, 2111 |
| BstFNI | CGCG | 1 cut(s) | 309 |
| BstH2I | RGCGCY | 1 cut(s) | 353 |
| BstHHI | GCGC | 4 cut(s) | 309, 352, 886, 2542 |
| BstKTI | GATC | 5 cut(s) | 1441, 2001, 2199, 2504, 2594 |
| BstMAI | GTCTC | 7 cut(s) | 869, 1360, 1417, 1708, 1751, 1929, 2385 |
| BstMBI | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 33, 772, 797, 913, 1214, 1322, 1825, 1958, 2187 |
| BstNSI | RCATGY | 4 cut(s) | 262, 880, 890, 2152 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 681 |
| BstSCI | CCNGG | 2 cut(s) | 87, 175 |
| BstSFI | CTRYAG | 2 cut(s) | 513, 1817 |
| BstUI | CGCG | 1 cut(s) | 309 |
| BstV2I | GAAGAC | 1 cut(s) | 2473 |
| BstX2I | RGATCY | 1 cut(s) | 2591 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2405 |
| BstYI | RGATCY | 1 cut(s) | 2591 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1220, 2027 |
| BsuI | GTATCC | 2 cut(s) | 85, 2596 |
| BsuRI | GGCC | 6 cut(s) | 27, 434, 1394, 1756, 1961, 2168 |
| BtgI | CCRYGG | 1 cut(s) | 868 |
| BtsCI | GGATG | 4 cut(s) | 403, 616, 1565, 2111 |
| BtsIMutI | CAGTG | 2 cut(s) | 2305, 2504 |
| BveI | ACCTGC | 4 cut(s) | 1216, 1378, 1542, 2424 |
| Cac8I | GCNNGC | 4 cut(s) | 260, 882, 1085, 2280 |
| CciI | TCATGA | 3 cut(s) | 669, 2199, 2254 |
| CfoI | GCGC | 4 cut(s) | 309, 352, 886, 2542 |
| Cfr13I | GGNCC | 7 cut(s) | 85, 1392, 1755, 1916, 1960, 2088, 2227 |
| CseI | GACGC | 2 cut(s) | 298, 1690 |
| Csp6I | GTAC | 9 cut(s) | 329, 340, 499, 1114, 1358, 1796, 2418, 2478, 2490 |
| CviQI | GTAC | 9 cut(s) | 329, 340, 499, 1114, 1358, 1796, 2418, 2478, 2490 |
| DpnI | GATC | 5 cut(s) | 1440, 2000, 2198, 2503, 2593 |
| DpnII | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1700, 2514 |
| EaeI | YGGCCR | 1 cut(s) | 25 |
| Eam1104I | CTCTTC | 5 cut(s) | 516, 528, 632, 2013, 2202 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1700, 2514 |
| EarI | CTCTTC | 5 cut(s) | 516, 528, 632, 2013, 2202 |
| Ecl136II | GAGCTC | 3 cut(s) | 1354, 1783, 2212 |
| Eco130I | CCWWGG | 4 cut(s) | 429, 868, 2169, 2461 |
| Eco147I | AGGCCT | 1 cut(s) | 434 |
| Eco24I | GRGCYC | 3 cut(s) | 1356, 1785, 2214 |
| Eco31I | GGTCTC | 3 cut(s) | 869, 1360, 1929 |
| Eco32I | GATATC | 1 cut(s) | 1718 |
| Eco47I | GGWCC | 4 cut(s) | 85, 1916, 2088, 2227 |
| Eco47III | AGCGCT | 1 cut(s) | 351 |
| Eco53kI | GAGCTC | 3 cut(s) | 1354, 1783, 2212 |
| Eco57I | CTGAAG | 3 cut(s) | 479, 585, 1656 |
| Eco81I | CCTNAGG | 2 cut(s) | 1220, 2027 |
| EcoICRI | GAGCTC | 3 cut(s) | 1354, 1783, 2212 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1223 |
| EcoO109I | RGGNCCY | 4 cut(s) | 85, 1755, 1916, 2088 |
| EcoRV | GATATC | 1 cut(s) | 1718 |
| EcoT14I | CCWWGG | 4 cut(s) | 429, 868, 2169, 2461 |
| EcoT38I | GRGCYC | 3 cut(s) | 1356, 1785, 2214 |
| ErhI | CCWWGG | 4 cut(s) | 429, 868, 2169, 2461 |
| Esp3I | CGTCTC | 1 cut(s) | 1708 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 635, 667 |
| FaqI | GGGAC | 1 cut(s) | 1030 |
| FauI | CCCGC | 1 cut(s) | 1036 |
| FauNDI | CATATG | 2 cut(s) | 1764, 2512 |
| FbaI | TGATCA | 2 cut(s) | 1998, 2196 |
| FblI | GTMKAC | 1 cut(s) | 2378 |
| FokI | GGATG | 4 cut(s) | 410, 623, 1552, 2098 |
| FriOI | GRGCYC | 3 cut(s) | 1356, 1785, 2214 |
| FspBI | CTAG | 9 cut(s) | 386, 767, 935, 1061, 1280, 1787, 2271, 2285, 2484 |
| FspI | TGCGCA | 2 cut(s) | 885, 2541 |
| GlaI | GCGC | 4 cut(s) | 308, 351, 885, 2541 |
| GsaI | CCCAGC | 1 cut(s) | 951 |
| GsuI | CTGGAG | 2 cut(s) | 1733, 2069 |
| HaeII | RGCGCY | 1 cut(s) | 353 |
| HaeIII | GGCC | 6 cut(s) | 27, 434, 1394, 1756, 1961, 2168 |
| HapII | CCGG | 3 cut(s) | 89, 176, 1885 |
| HgaI | GACGC | 2 cut(s) | 298, 1690 |
| HhaI | GCGC | 4 cut(s) | 309, 352, 886, 2542 |
| Hin1I | GRCGYC | 1 cut(s) | 1701 |
| Hin6I | GCGC | 4 cut(s) | 307, 350, 884, 2540 |
| HinP1I | GCGC | 4 cut(s) | 307, 350, 884, 2540 |
| HincII | GTYRAC | 2 cut(s) | 313, 1846 |
| HindII | GTYRAC | 2 cut(s) | 313, 1846 |
| HindIII | AAGCTT | 2 cut(s) | 644, 818 |
| HpaII | CCGG | 3 cut(s) | 89, 176, 1885 |
| HphI | GGTGA | 7 cut(s) | 265, 313, 1322, 1523, 1879, 1985, 2449 |
| Hpy166II | GTNNAC | 5 cut(s) | 313, 706, 1625, 1846, 2379 |
| Hpy8I | GTNNAC | 5 cut(s) | 313, 706, 1625, 1846, 2379 |
| Hpy99I | CGWCG | 1 cut(s) | 1365 |
| HpyAV | CCTTC | 8 cut(s) | 292, 735, 739, 1160, 1247, 1631, 1675, 2580 |
| HpyCH4III | ACNGT | 3 cut(s) | 557, 703, 1930 |
| HpyCH4IV | ACGT | 2 cut(s) | 120, 1360 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 33, 772, 797, 913, 1214, 1322, 1825, 1958, 2187 |
| HpySE526I | ACGT | 2 cut(s) | 120, 1360 |
| Hsp92I | GRCGYC | 1 cut(s) | 1701 |
| HspAI | GCGC | 4 cut(s) | 307, 350, 884, 2540 |
| KpnI | GGTACC | 2 cut(s) | 332, 2481 |
| Ksp22I | TGATCA | 2 cut(s) | 1998, 2196 |
| Kzo9I | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| LguI | GCTCTTC | 1 cut(s) | 2202 |
| LmnI | GCTCC | 5 cut(s) | 1001, 1180, 1788, 2028, 2217 |
| LweI | GCATC | 6 cut(s) | 294, 388, 847, 1255, 2043, 2524 |
| MaeI | CTAG | 9 cut(s) | 386, 767, 935, 1061, 1280, 1787, 2271, 2285, 2484 |
| MaeII | ACGT | 2 cut(s) | 120, 1360 |
| MaeIII | GTNAC | 8 cut(s) | 131, 674, 688, 872, 1511, 1529, 1973, 2140 |
| MalI | GATC | 5 cut(s) | 1440, 2000, 2198, 2503, 2593 |
| MboI | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| MflI | RGATCY | 1 cut(s) | 2591 |
| MhlI | GDGCHC | 5 cut(s) | 75, 1356, 1785, 2214, 2268 |
| MluCI | AATT | 8 cut(s) | 17, 851, 1162, 1561, 1629, 1944, 2002, 2372 |
| MlyI | GAGTC | 5 cut(s) | 799, 1099, 1537, 1723, 1970 |
| MmeI | TCCRAC | 3 cut(s) | 342, 1168, 1343 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1236, 2419 |
| MseI | TTAA | 4 cut(s) | 1968, 2064, 2628, 2647 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1885 |
| MspA1I | CMGCKG | 2 cut(s) | 1205, 1841 |
| MspI | CCGG | 3 cut(s) | 89, 176, 1885 |
| MspR9I | CCNGG | 2 cut(s) | 89, 177 |
| Mva1269I | GAATGC | 2 cut(s) | 951, 1880 |
| MvnI | CGCG | 1 cut(s) | 309 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 33, 772, 797, 913, 1214, 1322, 1825, 1958, 2187 |
| NciI | CCSGG | 2 cut(s) | 89, 177 |
| NcoI | CCATGG | 1 cut(s) | 868 |
| NdeI | CATATG | 2 cut(s) | 1764, 2512 |
| NdeII | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| NlaIV | GGNNCC | 3 cut(s) | 87, 330, 2479 |
| NmuCI | GTSAC | 7 cut(s) | 131, 674, 872, 1511, 1529, 1973, 2140 |
| NsbI | TGCGCA | 2 cut(s) | 885, 2541 |
| NspI | RCATGY | 4 cut(s) | 262, 880, 890, 2152 |
| NspV | TTCGAA | 2 cut(s) | 14, 1618 |
| PaeI | GCATGC | 1 cut(s) | 262 |
| PagI | TCATGA | 3 cut(s) | 669, 2199, 2254 |
| PaqCI | CACCTGC | 2 cut(s) | 1542, 2424 |
| PceI | AGGCCT | 1 cut(s) | 434 |
| PciI | ACATGT | 1 cut(s) | 2148 |
| PciSI | GCTCTTC | 1 cut(s) | 2202 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1698 |
| PctI | GAATGC | 2 cut(s) | 951, 1880 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1236, 2419 |
| PfeI | GAWTC | 7 cut(s) | 192, 266, 490, 826, 989, 1900, 2032 |
| Pfl23II | CGTACG | 1 cut(s) | 1357 |
| PleI | GAGTC | 5 cut(s) | 799, 1098, 1536, 1723, 1970 |
| PpsI | GAGTC | 5 cut(s) | 799, 1098, 1536, 1723, 1970 |
| Ppu21I | YACGTR | 1 cut(s) | 121 |
| PpuMI | RGGWCCY | 3 cut(s) | 85, 1916, 2088 |
| PscI | ACATGT | 1 cut(s) | 2148 |
| PshAI | GACNNNNGTC | 1 cut(s) | 681 |
| PsiI | TTATAA | 1 cut(s) | 1011 |
| Psp124BI | GAGCTC | 3 cut(s) | 1356, 1785, 2214 |
| Psp5II | RGGWCCY | 3 cut(s) | 85, 1916, 2088 |
| PspFI | CCCAGC | 1 cut(s) | 947 |
| PspLI | CGTACG | 1 cut(s) | 1357 |
| PspN4I | GGNNCC | 3 cut(s) | 87, 330, 2479 |
| PspPI | GGNCC | 7 cut(s) | 85, 1392, 1755, 1916, 1960, 2088, 2227 |
| PspPPI | RGGWCCY | 3 cut(s) | 85, 1916, 2088 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 698, 730 |
| PstI | CTGCAG | 1 cut(s) | 1821 |
| PsuI | RGATCY | 1 cut(s) | 2591 |
| PvuII | CAGCTG | 2 cut(s) | 1205, 1841 |
| RsaI | GTAC | 9 cut(s) | 330, 341, 500, 1115, 1359, 1797, 2419, 2479, 2491 |
| RsaNI | GTAC | 9 cut(s) | 329, 340, 499, 1114, 1358, 1796, 2418, 2478, 2490 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1885 |
| SacI | GAGCTC | 3 cut(s) | 1356, 1785, 2214 |
| SapI | GCTCTTC | 1 cut(s) | 2202 |
| SaqAI | TTAA | 4 cut(s) | 1968, 2064, 2628, 2647 |
| Sau3AI | GATC | 5 cut(s) | 1438, 1998, 2196, 2501, 2591 |
| Sau96I | GGNCC | 7 cut(s) | 85, 1392, 1755, 1916, 1960, 2088, 2227 |
| ScaI | AGTACT | 1 cut(s) | 2419 |
| SchI | GAGTC | 5 cut(s) | 799, 1099, 1537, 1723, 1970 |
| ScrFI | CCNGG | 2 cut(s) | 89, 177 |
| SduI | GDGCHC | 5 cut(s) | 75, 1356, 1785, 2214, 2268 |
| SfaNI | GCATC | 6 cut(s) | 294, 388, 847, 1255, 2043, 2524 |
| SfcI | CTRYAG | 2 cut(s) | 513, 1817 |
| SfuI | TTCGAA | 2 cut(s) | 14, 1618 |
| SinI | GGWCC | 4 cut(s) | 85, 1916, 2088, 2227 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1885 |
| SmlI | CTYRAG | 5 cut(s) | 293, 821, 1251, 1778, 1895 |
| SmoI | CTYRAG | 5 cut(s) | 293, 821, 1251, 1778, 1895 |
| SphI | GCATGC | 1 cut(s) | 262 |
| Sse9I | AATT | 8 cut(s) | 17, 851, 1162, 1561, 1629, 1944, 2002, 2372 |
| SseBI | AGGCCT | 1 cut(s) | 434 |
| SsiI | CCGC | 3 cut(s) | 28, 1043, 2078 |
| SspI | AATATT | 2 cut(s) | 1175, 1546 |
| SspMI | CTAG | 9 cut(s) | 386, 767, 935, 1061, 1280, 1787, 2271, 2285, 2484 |
| SstI | GAGCTC | 3 cut(s) | 1356, 1785, 2214 |
| StuI | AGGCCT | 1 cut(s) | 434 |
| StyD4I | CCNGG | 2 cut(s) | 87, 175 |
| StyI | CCWWGG | 4 cut(s) | 429, 868, 2169, 2461 |
| TaaI | ACNGT | 3 cut(s) | 557, 703, 1930 |
| TaiI | ACGT | 2 cut(s) | 123, 1363 |
| TaqI | TCGA | 7 cut(s) | 14, 99, 195, 443, 927, 1618, 1992 |
| TasI | AATT | 8 cut(s) | 17, 851, 1162, 1561, 1629, 1944, 2002, 2372 |
| TatI | WGTACW | 5 cut(s) | 339, 498, 1113, 1795, 2417 |
| TauI | GCSGC | 2 cut(s) | 30, 2081 |
| TfiI | GAWTC | 7 cut(s) | 192, 266, 490, 826, 989, 1900, 2032 |
| Tru1I | TTAA | 4 cut(s) | 1968, 2064, 2628, 2647 |
| Tru9I | TTAA | 4 cut(s) | 1968, 2064, 2628, 2647 |
| TscAI | CASTG | 2 cut(s) | 2305, 2511 |
| TseFI | GTSAC | 7 cut(s) | 131, 674, 872, 1511, 1529, 1973, 2140 |
| Tsp45I | GTSAC | 7 cut(s) | 131, 674, 872, 1511, 1529, 1973, 2140 |
| TspGWI | ACGGA | 1 cut(s) | 2569 |
| TspRI | CASTG | 2 cut(s) | 2305, 2511 |
| VpaK11BI | GGWCC | 4 cut(s) | 85, 1916, 2088, 2227 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1223 |
| XapI | RAATTY | 2 cut(s) | 17, 1162 |
| XceI | RCATGY | 4 cut(s) | 262, 880, 890, 2152 |
| XmiI | GTMKAC | 1 cut(s) | 2378 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1236, 2419 |
| XspI | CTAG | 9 cut(s) | 386, 767, 935, 1061, 1280, 1787, 2271, 2285, 2484 |
| ZrmI | AGTACT | 1 cut(s) | 2419 |