Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003535

Physical Location & Seq

Genomic Coordinates Forward (+)

32951083 .. 32954863

Gene Structure 3781 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g42120.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGCAGACCTCCTCCTCCTCCTCCTCCCCACTCCAAACCCTCCTCGACCTCATCAACGAGACCCTCTCCCTCCTCCTCCGCACCTCCCTCACCGTCCGATCCTTCCCCTCCCGCTGGCACCCCCTCCGCTCCAACCTCCTCTCCCTCCACTCCTCCATCTCCTCCGTCTCCGACTCCCCCCACTGGGCCGAGAACCCCCTCCTCTACACTCTCCTCCCCAACCTCCTCTCCACTCTCCAGCGCCTCAAGGCTCTCTCCGACCAATGCAACGACTCGTCGTTTTCCGGCGGGAAACTCCACATGCAGAGCGACCTCGACATGGCCGCCGCCTCCCTCTCTAACCTCCTCCGCGACCTCGACCTCCTCCTCAGATCCGGCGTCCTCCACCAGTCCAACGCCATCGTTCTCTCCCACCCGGGTCCCGGCTCCGACAAAGAGAATCTCACCTTCTTCATCCGCGACCTCTTCACCCGCCTCCAAATCGGCGGCGTCGAGTTCAAGAACAAGGCTCTCGAGTCTCTCCTTCAGCTTCTCCAAGACGACGACAAGGCCGCCGGATTCGTCGCCAAAGAAGGCAACGTCGCCTATCTGATTCACCTCCTCGATTTCCACACCCAGCCCTGGGTCCGCGAACAAGCCACCTCCGCGGTCTCGCTCCTCGCCGCCGCGAACGACGAGTCGCGCAAGGCGGTGTTCGAGGAAGGCGGTTTAGGCCCGTTGCTGAGAATCCTCGAATCCGGGACCACCGCATTGAAAGAGAAGGCCGCTATCGCCGTCGAGGCCCTCACCGCCGACCCGGAAAACGCCTGGGCCGTGTCGGCCTACGGCGGCGTTTCGGTCCTGATCCAATCCATCCGATCCGGGTCTCCGGCGACGCAGACACACTCGGTCGGCGCGATTCGAAACGTGGCGAATGTGGAGGAGATCAAGACGGCGTTGGGAGAAGAAGGGGCTGTGCCGGTACTACTTCAATTGCTTCTCTCCGGCACCATTACCGCTCAAGAGAAATCGGCCAATTGCTTAGCGATTCTAGCCTCAACCGATGAGTATTTTCGAGCTTTGATAATCCAAGAACGTGGGCTGCAGAGACTGATGCATTTGATCCATGATTTACTAAGCTCCGAGACTTTGGAACACGTCCTCCGAGCCCTCACTTCGCTCTCGGCTTCGGAGCCCTGCGCTCGAGTCCTGTCATCTTCAACCTTGTTCCTAATCCAATTGGGCGAGTTCATAAAGCAGGGTAACTCAATCCTTCAGCAAATCTCTGTTTCATTGCTCGCGAGTTTATCAATTAGTATCAGCGATGGGAATAAGCGAGCCATTGGGAGCTGTATGGGGTCATTGGTCAAGCTCATGGAGTCGCCAAAACCGGTGGGGCTACAGGAATCGGCGTCGCAAGCTCTCGTTTCGCTGTTGACGGTCCGGTCGAACCGGAAAGAGTTGGTTAGAGACGAGAAGAGCGTGATGAGGCTGATCCAGATGTTGGATCCCAGAAACGAAGCTGTGAGCCACAAGTTTCCGGTGATGGTAATCTCGGCGGTGCTCGCCGGAGGAAGCCAGGGATGCAGGAAGAGGCTAGCGGCGGCCGGAGCTCAGCCACATTTGCAGAAGCTAGCGGAAATGGAGGTCGCCGGAGCCAAGAAGGCGGTACAGAGACTCTCCGGCAATAGGCTAAAGACCATTTTCTCCCTGACTTGGAGGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

569

Amino Acids

61.36

Weight (kDa)

7.25

Isoelectric Point (pI)

46.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7032	PF23005	19 - 127	1.2e-30	Domain of unknown function (DUF7032)
ARM_PUB	PF25598	167 - 349	2.4e-07	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	181 - 386	5.1e-13	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05810 AT2G05810
fragaria_vesca	FvH4_1g21781 FvH4_3g23060 FvH4_6g42120
malus_domestica	MD09G1114400.v1.1 MD17G1106100.v1.1
prunus_persica	Prupe.3G210100_v2.0.a1
pyrus_communis	pycom09g03890 pycom17g09870
rosa_chinensis	RchiOBHm_Chr2g0158031
rosa_laevigata	RLG00000005113 RLG00000009946 RLG00000011412 RLG00000014991 RLG00000021051 RLG00000034476
rosa_multiflora	Rmu_co8383981.1_g000001 Rmu_sc0000419.1_g000016 Rmu_sc0004064.1_g000016 Rmu_sc0009909.1_g000006
rosa_roxburghii	Rroxscaffold_2G00091730 Rroxscaffold_7G00168560
rosa_rugosa	Rorug02G0465300
rosa_samantha	Rh2AG531300 Rh2BG545800 Rh2CG515600 Rh2DG553900 Rh3AG074100 Rh3CG075500 Rh4AG058000 Rh4BG056800 Rh6AG401300 Rh6CG415200
rosa_wichuraiana	Rw2G043940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1423
AccB1I	GGYRCC	2 cut(s)	117, 986
AccB7I	CCANNNNNTGG	1 cut(s)	1483
AccBSI	CCGCTC	2 cut(s)	129, 998
AccII	CGCG	8 cut(s)	351, 459, 630, 647, 668, 682, 896, 1280
AclWI	GGATC	8 cut(s)	93, 366, 838, 852, 1096, 1468, 1481, 1494
AcoI	YGGCCR	3 cut(s)	321, 1011, 1584
AcuI	CTGAAG	2 cut(s)	509, 1238
AcyI	GRCGYC	3 cut(s)	378, 489, 1391
AfaI	GTAC	2 cut(s)	963, 1650
AflIII	ACRYGT	1 cut(s)	1135
AgeI	ACCGGT	1 cut(s)	1369
AgsI	TTSAA	4 cut(s)	499, 754, 971, 1200
AjiI	CACGTC	1 cut(s)	1138
AjnI	CCWGG	3 cut(s)	620, 806, 1557
AloI	GAACNNNNNNTCC	2 cut(s)	1125, 1157
AluBI	AGCT	9 cut(s)	529, 1058, 1119, 1329, 1351, 1400, 1502, 1592, 1612
AluI	AGCT	9 cut(s)	529, 1058, 1119, 1329, 1351, 1400, 1502, 1592, 1612
Alw21I	GWGCWC	2 cut(s)	1545, 1594
Alw26I	GTCTC	9 cut(s)	53, 172, 522, 655, 870, 1081, 1118, 1443, 1648
AlwI	GGATC	8 cut(s)	93, 366, 838, 852, 1096, 1468, 1481, 1494
AlwNI	CAGNNNCTG	1 cut(s)	1090
Ama87I	CYCGRG	3 cut(s)	415, 512, 1182
ApeKI	GCWGC	1 cut(s)	1081
ArsI	GACNNNNNNTTYG	2 cut(s)	662, 694
AsiGI	ACCGGT	1 cut(s)	1369
AspLEI	GCGC	4 cut(s)	243, 684, 896, 1181
AspS9I	GGNCC	9 cut(s)	186, 419, 625, 713, 741, 781, 810, 838, 1420
AsuC2I	CCSGG	6 cut(s)	416, 417, 423, 739, 797, 862
AsuHPI	GGTGA	6 cut(s)	82, 436, 460, 587, 778, 1534
AsuII	TTCGAA	1 cut(s)	901
AsuNHI	GCTAGC	2 cut(s)	1576, 1612
AvaI	CYCGRG	3 cut(s)	415, 512, 1182
AvaII	GGWCC	5 cut(s)	419, 625, 741, 838, 1420
BamHI	GGATCC	1 cut(s)	1486
BanI	GGYRCC	2 cut(s)	117, 986
BanII	GRGCYC	3 cut(s)	1150, 1176, 1594
Bbv12I	GWGCWC	2 cut(s)	1545, 1594
BbvI	GCAGC	1 cut(s)	1068
BccI	CCATC	5 cut(s)	164, 407, 860, 1298, 1519
BceAI	ACGGC	4 cut(s)	758, 797, 841, 948
BciT130I	CCWGG	3 cut(s)	622, 808, 1559
BcnI	CCSGG	6 cut(s)	416, 417, 423, 739, 797, 862
BcoDI	GTCTC	9 cut(s)	53, 172, 522, 655, 870, 1081, 1118, 1443, 1648
BfaI	CTAG	3 cut(s)	1031, 1577, 1613
BfmI	CTRYAG	2 cut(s)	1082, 1379
BfoI	RGCGCY	1 cut(s)	244
BglI	GCCNNNNNGGC	3 cut(s)	779, 818, 1643
BlpI	GCTNAGC	2 cut(s)	1021, 1593
Bme1390I	CCNGG	9 cut(s)	416, 417, 423, 622, 739, 797, 808, 862, 1559
Bme18I	GGWCC	5 cut(s)	419, 625, 741, 838, 1420
BmeT110I	CYCGRG	3 cut(s)	415, 512, 1182
BmgBI	CACGTC	1 cut(s)	1138
BmgT120I	GGNCC	9 cut(s)	186, 419, 625, 713, 741, 781, 810, 838, 1420
BmrFI	CCNGG	9 cut(s)	416, 417, 423, 622, 739, 797, 808, 862, 1559
BmrI	ACTGGG	1 cut(s)	193
BmsI	GCATC	2 cut(s)	1083, 1553
BmtI	GCTAGC	2 cut(s)	1580, 1616
BmuI	ACTGGG	1 cut(s)	193
BplI	GAGNNNNNCTC	2 cut(s)	50, 82
BpmI	CTGGAG	1 cut(s)	221
Bpu1102I	GCTNAGC	2 cut(s)	1021, 1593
Bpu14I	TTCGAA	1 cut(s)	901
BpuEI	CTTGAG	2 cut(s)	230, 984
BpuMI	CCSGG	6 cut(s)	416, 417, 423, 739, 797, 862
BsaBI	GATNNNNATC	1 cut(s)	1529
BsaHI	GRCGYC	3 cut(s)	378, 489, 1391
BsaI	GGTCTC	3 cut(s)	53, 655, 870
BsaJI	CCNNGG	6 cut(s)	415, 620, 621, 645, 807, 1558
BsaWI	WCCGGW	4 cut(s)	1369, 1422, 1431, 1519
BsaXI	ACNNNNNCTCC	6 cut(s)	125, 155, 212, 242, 1125, 1155
Bse118I	RCCGGY	2 cut(s)	958, 1369
Bse1I	ACTGG	2 cut(s)	188, 388
Bse3DI	GCAATG	1 cut(s)	1271
Bse8I	GATNNNNATC	1 cut(s)	1529
BseBI	CCWGG	3 cut(s)	622, 808, 1559
BseDI	CCNNGG	6 cut(s)	415, 620, 621, 645, 807, 1558
BseGI	GGATG	3 cut(s)	453, 852, 1568
BseJI	GATNNNNATC	1 cut(s)	1529
BseMI	GCAATG	1 cut(s)	1271
BseMII	CTCAG	3 cut(s)	382, 713, 1607
BseNI	ACTGG	2 cut(s)	188, 388
BseX3I	CGGCCG	1 cut(s)	1584
BseXI	GCAGC	1 cut(s)	1068
BseYI	CCCAGC	1 cut(s)	615
Bsh1236I	CGCG	8 cut(s)	351, 459, 630, 647, 668, 682, 896, 1280
Bsh1285I	CGRYCG	3 cut(s)	891, 1427, 1587
BshNI	GGYRCC	2 cut(s)	117, 986
BshTI	ACCGGT	1 cut(s)	1369
BsiEI	CGRYCG	3 cut(s)	891, 1427, 1587
BsiHKAI	GWGCWC	2 cut(s)	1545, 1594
BsiHKCI	CYCGRG	3 cut(s)	415, 512, 1182
BslFI	GGGAC	2 cut(s)	405, 754
BsmAI	GTCTC	9 cut(s)	53, 172, 522, 655, 870, 1081, 1118, 1443, 1648
BsmBI	CGTCTC	2 cut(s)	172, 1443
BsmFI	GGGAC	2 cut(s)	405, 754
Bso31I	GGTCTC	3 cut(s)	53, 655, 870
BsoBI	CYCGRG	3 cut(s)	415, 512, 1182
Bsp119I	TTCGAA	1 cut(s)	901
Bsp1286I	GDGCHC	4 cut(s)	1150, 1176, 1545, 1594
Bsp143I	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
Bsp1720I	GCTNAGC	2 cut(s)	1021, 1593
Bsp68I	TCGCGA	1 cut(s)	1280
BspCNI	CTCAG	3 cut(s)	381, 714, 1606
BspFNI	CGCG	8 cut(s)	351, 459, 630, 647, 668, 682, 896, 1280
BspMAI	CTGCAG	1 cut(s)	1086
BspOI	GCTAGC	2 cut(s)	1580, 1616
BspPI	GGATC	8 cut(s)	93, 366, 838, 852, 1096, 1468, 1481, 1494
BspQI	GCTCTTC	1 cut(s)	1451
BspT104I	TTCGAA	1 cut(s)	901
BspT107I	GGYRCC	2 cut(s)	117, 986
BspTNI	GGTCTC	3 cut(s)	53, 655, 870
BsrBI	CCGCTC	2 cut(s)	129, 998
BsrDI	GCAATG	1 cut(s)	1271
BsrFI	RCCGGY	2 cut(s)	958, 1369
BsrI	ACTGG	2 cut(s)	188, 388
BssAI	RCCGGY	2 cut(s)	958, 1369
BssECI	CCNNGG	6 cut(s)	415, 620, 621, 645, 807, 1558
BssMI	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
BssNI	GRCGYC	3 cut(s)	378, 489, 1391
Bst2UI	CCWGG	3 cut(s)	622, 808, 1559
Bst4CI	ACNGT	2 cut(s)	94, 1420
Bst6I	CTCTTC	3 cut(s)	470, 1451, 1565
BstACI	GRCGYC	3 cut(s)	378, 489, 1391
BstBI	TTCGAA	1 cut(s)	901
BstC8I	GCNNGC	7 cut(s)	116, 1278, 1317, 1398, 1545, 1578, 1614
BstDEI	CTNAG	5 cut(s)	368, 722, 1021, 1115, 1593
BstDSI	CCRYGG	1 cut(s)	645
BstF5I	GGATG	3 cut(s)	453, 852, 1568
BstFNI	CGCG	8 cut(s)	351, 459, 630, 647, 668, 682, 896, 1280
BstH2I	RGCGCY	1 cut(s)	244
BstHHI	GCGC	4 cut(s)	243, 684, 896, 1181
BstKTI	GATC	8 cut(s)	101, 374, 846, 860, 927, 1104, 1476, 1489
BstMAI	GTCTC	9 cut(s)	53, 172, 522, 655, 870, 1081, 1118, 1443, 1648
BstMBI	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
BstMCI	CGRYCG	3 cut(s)	891, 1427, 1587
BstNI	CCWGG	3 cut(s)	622, 808, 1559
BstNSI	RCATGY	1 cut(s)	304
BstSCI	CCNGG	9 cut(s)	414, 415, 421, 620, 737, 795, 806, 860, 1557
BstSFI	CTRYAG	2 cut(s)	1082, 1379
BstUI	CGCG	8 cut(s)	351, 459, 630, 647, 668, 682, 896, 1280
BstV1I	GCAGC	1 cut(s)	1068
BstX2I	RGATCY	2 cut(s)	371, 1486
BstXI	CCANNNNNNTGG	1 cut(s)	1076
BstYI	RGATCY	2 cut(s)	371, 1486
BstZI	CGGCCG	1 cut(s)	1584
BtgI	CCRYGG	1 cut(s)	645
BtgZI	GCGATG	1 cut(s)	1317
BtrI	CACGTC	1 cut(s)	1138
BtsCI	GGATG	3 cut(s)	453, 852, 1568
BtsIMutI	CAGTG	1 cut(s)	181
BtuMI	TCGCGA	1 cut(s)	1280
Cac8I	GCNNGC	7 cut(s)	116, 1278, 1317, 1398, 1545, 1578, 1614
CaiI	CAGNNNCTG	1 cut(s)	1090
CfoI	GCGC	4 cut(s)	243, 684, 896, 1181
Cfr10I	RCCGGY	2 cut(s)	958, 1369
Cfr13I	GGNCC	9 cut(s)	186, 419, 625, 713, 741, 781, 810, 838, 1420
Cfr42I	CCGCGG	1 cut(s)	648
Cfr9I	CCCGGG	1 cut(s)	415
CpoI	CGGWCCG	1 cut(s)	1420
CseI	GACGC	4 cut(s)	367, 478, 883, 1380
Csp6I	GTAC	2 cut(s)	962, 1649
CspAI	ACCGGT	1 cut(s)	1369
CspCI	CAANNNNNGTGG	2 cut(s)	1353, 1388
CspI	CGGWCCG	1 cut(s)	1420
CviAII	CATG	4 cut(s)	301, 319, 1106, 1354
CviQI	GTAC	2 cut(s)	962, 1649
DdeI	CTNAG	5 cut(s)	368, 722, 1021, 1115, 1593
DpnI	GATC	8 cut(s)	100, 373, 845, 859, 926, 1103, 1475, 1488
DpnII	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
DrdI	GACNNNNNNGTC	1 cut(s)	1423
DseDI	GACNNNNNNGTC	1 cut(s)	1423
EaeI	YGGCCR	3 cut(s)	321, 1011, 1584
EagI	CGGCCG	1 cut(s)	1584
Eam1104I	CTCTTC	3 cut(s)	470, 1451, 1565
EarI	CTCTTC	3 cut(s)	470, 1451, 1565
Ecl136II	GAGCTC	1 cut(s)	1592
EclXI	CGGCCG	1 cut(s)	1584
Eco24I	GRGCYC	3 cut(s)	1150, 1176, 1594
Eco31I	GGTCTC	3 cut(s)	53, 655, 870
Eco47I	GGWCC	5 cut(s)	419, 625, 741, 838, 1420
Eco52I	CGGCCG	1 cut(s)	1584
Eco53kI	GAGCTC	1 cut(s)	1592
Eco57I	CTGAAG	2 cut(s)	509, 1238
Eco88I	CYCGRG	3 cut(s)	415, 512, 1182
EcoICRI	GAGCTC	1 cut(s)	1592
EcoO109I	RGGNCCY	2 cut(s)	419, 781
EcoRII	CCWGG	3 cut(s)	620, 806, 1557
EcoT22I	ATGCAT	1 cut(s)	1098
EcoT38I	GRGCYC	3 cut(s)	1150, 1176, 1594
Esp3I	CGTCTC	2 cut(s)	172, 1443
FaeI	CATG	4 cut(s)	304, 322, 1109, 1357
FaiI	YATR	6 cut(s)	302, 320, 1107, 1232, 1334, 1355
FaqI	GGGAC	2 cut(s)	405, 754
FatI	CATG	4 cut(s)	300, 318, 1105, 1353
FauI	CCCGC	3 cut(s)	119, 281, 479
FokI	GGATG	3 cut(s)	440, 839, 1575
FriOI	GRGCYC	3 cut(s)	1150, 1176, 1594
FspBI	CTAG	3 cut(s)	1031, 1577, 1613
GlaI	GCGC	4 cut(s)	242, 683, 895, 1180
GsaI	CCCAGC	1 cut(s)	619
GsuI	CTGGAG	1 cut(s)	221
HaeII	RGCGCY	1 cut(s)	244
HgaI	GACGC	4 cut(s)	367, 478, 883, 1380
HhaI	GCGC	4 cut(s)	243, 684, 896, 1181
Hin1I	GRCGYC	3 cut(s)	378, 489, 1391
Hin1II	CATG	4 cut(s)	304, 322, 1109, 1357
Hin6I	GCGC	4 cut(s)	241, 682, 894, 1179
HinP1I	GCGC	4 cut(s)	241, 682, 894, 1179
HincII	GTYRAC	1 cut(s)	1416
HindII	GTYRAC	1 cut(s)	1416
HphI	GGTGA	6 cut(s)	82, 436, 460, 587, 778, 1534
Hpy166II	GTNNAC	1 cut(s)	1416
Hpy188III	TCNNGA	7 cut(s)	499, 512, 841, 928, 1001, 1279, 1477
Hpy8I	GTNNAC	1 cut(s)	1416
Hpy99I	CGWCG	9 cut(s)	280, 494, 545, 566, 584, 677, 779, 877, 1396
HpyAV	CCTTC	9 cut(s)	112, 457, 533, 566, 695, 754, 941, 1262, 1636
HpyCH4III	ACNGT	2 cut(s)	94, 1420
HpyCH4IV	ACGT	4 cut(s)	579, 906, 1075, 1137
HpyCH4V	TGCA	7 cut(s)	4, 267, 304, 1084, 1096, 1566, 1606
HpyF3I	CTNAG	5 cut(s)	368, 722, 1021, 1115, 1593
HpySE526I	ACGT	4 cut(s)	579, 906, 1075, 1137
Hsp92I	GRCGYC	3 cut(s)	378, 489, 1391
Hsp92II	CATG	4 cut(s)	304, 322, 1109, 1357
HspAI	GCGC	4 cut(s)	241, 682, 894, 1179
KflI	GGGWCCC	1 cut(s)	419
KspI	CCGCGG	1 cut(s)	648
Kzo9I	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
LguI	GCTCTTC	1 cut(s)	1451
LmnI	GCTCC	8 cut(s)	134, 431, 660, 1124, 1171, 1326, 1589, 1634
Lsp1109I	GCAGC	1 cut(s)	1068
LweI	GCATC	2 cut(s)	1083, 1553
MaeI	CTAG	3 cut(s)	1031, 1577, 1613
MaeII	ACGT	4 cut(s)	579, 906, 1075, 1137
MaeIII	GTNAC	1 cut(s)	1241
MalI	GATC	8 cut(s)	100, 373, 845, 859, 926, 1103, 1475, 1488
MbiI	CCGCTC	2 cut(s)	129, 998
MboI	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
MboII	GAAGA	6 cut(s)	442, 457, 956, 1188, 1468, 1582
MfeI	CAATTG	3 cut(s)	971, 1015, 1217
MflI	RGATCY	2 cut(s)	371, 1486
MhlI	GDGCHC	4 cut(s)	1150, 1176, 1545, 1594
MluCI	AATT	4 cut(s)	971, 1015, 1217, 1290
MlyI	GAGTC	7 cut(s)	167, 266, 524, 686, 1194, 1367, 1650
MmeI	TCCRAC	6 cut(s)	156, 195, 282, 417, 453, 1464
Mph1103I	ATGCAT	1 cut(s)	1098
MspA1I	CMGCKG	2 cut(s)	114, 647
MspR9I	CCNGG	9 cut(s)	416, 417, 423, 622, 739, 797, 808, 862, 1559
MunI	CAATTG	3 cut(s)	971, 1015, 1217
MvaI	CCWGG	3 cut(s)	622, 808, 1559
MvnI	CGCG	8 cut(s)	351, 459, 630, 647, 668, 682, 896, 1280
NciI	CCSGG	6 cut(s)	416, 417, 423, 739, 797, 862
NdeII	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
NheI	GCTAGC	2 cut(s)	1576, 1612
NlaIII	CATG	4 cut(s)	304, 322, 1109, 1357
NmeAIII	GCCGAG	3 cut(s)	214, 1142, 1514
NruI	TCGCGA	1 cut(s)	1280
NsiI	ATGCAT	1 cut(s)	1098
NspI	RCATGY	1 cut(s)	304
NspV	TTCGAA	1 cut(s)	901
PaeR7I	CTCGAG	2 cut(s)	512, 1182
PasI	CCCWGGG	1 cut(s)	621
PciSI	GCTCTTC	1 cut(s)	1451
PcsI	WCGNNNNNNNCGW	5 cut(s)	489, 810, 893, 1424, 1458
PfeI	GAWTC	8 cut(s)	439, 558, 592, 726, 734, 898, 1027, 1385
PflMI	CCANNNNNTGG	1 cut(s)	1483
PfoI	TCCNGGA	1 cut(s)	737
PinAI	ACCGGT	1 cut(s)	1369
PleI	GAGTC	7 cut(s)	167, 266, 523, 685, 1193, 1366, 1650
PpsI	GAGTC	7 cut(s)	167, 266, 523, 685, 1193, 1366, 1650
PpuMI	RGGWCCY	1 cut(s)	419
Psp124BI	GAGCTC	1 cut(s)	1594
Psp5II	RGGWCCY	1 cut(s)	419
Psp6I	CCWGG	3 cut(s)	620, 806, 1557
PspFI	CCCAGC	1 cut(s)	615
PspGI	CCWGG	3 cut(s)	620, 806, 1557
PspPI	GGNCC	9 cut(s)	186, 419, 625, 713, 741, 781, 810, 838, 1420
PspPPI	RGGWCCY	1 cut(s)	419
PspXI	VCTCGAGB	1 cut(s)	1182
PstI	CTGCAG	1 cut(s)	1086
PstNI	CAGNNNCTG	1 cut(s)	1090
PsuI	RGATCY	2 cut(s)	371, 1486
RruI	TCGCGA	1 cut(s)	1280
RsaI	GTAC	2 cut(s)	963, 1650
RsaNI	GTAC	2 cut(s)	962, 1649
Rsr2I	CGGWCCG	1 cut(s)	1420
RsrII	CGGWCCG	1 cut(s)	1420
SacI	GAGCTC	1 cut(s)	1594
SacII	CCGCGG	1 cut(s)	648
SapI	GCTCTTC	1 cut(s)	1451
Sau3AI	GATC	8 cut(s)	98, 371, 843, 857, 924, 1101, 1473, 1486
Sau96I	GGNCC	9 cut(s)	186, 419, 625, 713, 741, 781, 810, 838, 1420
SchI	GAGTC	7 cut(s)	167, 266, 524, 686, 1194, 1367, 1650
ScrFI	CCNGG	9 cut(s)	416, 417, 423, 622, 739, 797, 808, 862, 1559
SduI	GDGCHC	4 cut(s)	1150, 1176, 1545, 1594
SfaNI	GCATC	2 cut(s)	1083, 1553
SfcI	CTRYAG	2 cut(s)	1082, 1379
SfiI	GGCCNNNNNGGCC	1 cut(s)	818
Sfr274I	CTCGAG	2 cut(s)	512, 1182
Sfr303I	CCGCGG	1 cut(s)	648
SfuI	TTCGAA	1 cut(s)	901
SgrBI	CCGCGG	1 cut(s)	648
SinI	GGWCC	5 cut(s)	419, 625, 741, 838, 1420
SlaI	CTCGAG	2 cut(s)	512, 1182
SmaI	CCCGGG	1 cut(s)	417
SmlI	CTYRAG	4 cut(s)	245, 512, 999, 1182
SmoI	CTYRAG	4 cut(s)	245, 512, 999, 1182
Sse9I	AATT	4 cut(s)	971, 1015, 1217, 1290
SspMI	CTAG	3 cut(s)	1031, 1577, 1613
SstI	GAGCTC	1 cut(s)	1594
StyD4I	CCNGG	9 cut(s)	414, 415, 421, 620, 737, 795, 806, 860, 1557
TaaI	ACNGT	2 cut(s)	94, 1420
TaiI	ACGT	4 cut(s)	582, 909, 1078, 1140
TaqII	GACCGA	2 cut(s)	826, 877
TasI	AATT	4 cut(s)	971, 1015, 1217, 1290
TfiI	GAWTC	8 cut(s)	439, 558, 592, 726, 734, 898, 1027, 1385
TscAI	CASTG	1 cut(s)	188
TseI	GCWGC	1 cut(s)	1081
TspDTI	ATGAA	3 cut(s)	442, 1219, 1260
TspGWI	ACGGA	1 cut(s)	154
TspMI	CCCGGG	1 cut(s)	415
TspRI	CASTG	1 cut(s)	188
Van91I	CCANNNNNTGG	1 cut(s)	1483
VpaK11BI	GGWCC	5 cut(s)	419, 625, 741, 838, 1420
XceI	RCATGY	1 cut(s)	304
XhoI	CTCGAG	2 cut(s)	512, 1182
XmaI	CCCGGG	1 cut(s)	415
XspI	CTAG	3 cut(s)	1031, 1577, 1613
Zsp2I	ATGCAT	1 cut(s)	1098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.