Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003535

Physical Location & Seq

Genomic Coordinates Forward (+)

71431453 .. 71433162

Gene Structure 1710 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021051

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGCAGAGCACCACCGCCACCGCCACCTCCCCCCTCCAAACCCTCCTCGACCTCATCAACGAGACCCTCTCCCTCATCCTCCGCACCTCCCTCACCGTCCGGTCCTTCGCCGGCCGCTGGCAGCCCCTCCGCACCAAGCTCGCCTCCCTCCAGACCTCCGTCGCCGACATCTCCGACTCCCCCCACTGGGCCGAGAACCCCCTCCTCTACACTCTCCTCCCCAACCTCCTCTCCACTCTCCAGCGCCTCAAGGCCCTCGCCGACCAATGCAACGACACGTCGTTCACCGGCGGGAAGCTCCACATGCAGAGCGACCTCGACATGGCCGCCGCGTCCCTCACCAACCAGCTCCGCGACCTCGACCTGCTGCTCAGATCTGGCGTGCTCCACCAGTCAAACGCCATCGTTTTGTCGCACCCGGGTCCCGGGTCGGATAAAGAGAATCTCAGCTTCTTTATCCGGGACCTCTTCACCCGGCTGCAAATCGGCGGCGTCGAGTTCAAGAAGAAGGCTCTGGAGTCTCTGCTTCAGCTTCTTGAAGACGACGACAAGGCCGCGACCCTCGTCGCCAAAGAAGGAAACGTCGCCTATTTGATTCACCTGCTCGATTTCCACAACCAGCCTTGGGTCCGAGAACAGGCCACCTCCGCCGTCTCGCTTCTCGCCGCCGCAAACGACGAGTCGCGCAAGGCGGTGTTCGAGGAAGGGGGTTTAGGCCCGTTGCTGAGACTACTCGAATCGGGGACTACCACATTGAAGGAGAAGGCGGCAATCGCCGTCGAGGCACTCACCGCCGACCCGGAACACGCCTGGGCGGTTTCAGCCTACGGCGGCGTTTCGGTCTTGATCGAATCCATTCGATCCGGGACTGCGGCGACGCAGACCCACTCGGTCGGCGCCATTAGAAACGTGGCTAACGTGGAGGAGATCAAGACGGCTTTAGGAGAAGAAGGGGCTGTGCCAGTGCTACTCCAATTGCTCCTCTCCGGCACCATCACCGCCCAAGAGAAATCCGCCAATTGCATAGCGATTTTAGCCTCAACCGATGAGTATTTCCGAGCTTTGATCATCCAAGAACGCGGCCTGCAGAGATTGATGCATTTGATCCAGGACTTGCTGAGCTCGGAGACGTTGGAACACGTGCTCCGAGCCATCACTTCGCTTTCGGCATCAGAGCCCTGCGCTCGAGTCCTGTCATCTTCAACCTTGTTCCTAATTCAATTGGCCGAGTTCATAAAGCAGGGCAACCCAATCCTCCAGCAAATCTCAGTTTCTTTGCTTTCGAATCTATCAATTAGTATCAGCGATGGGAATAAGCGAGCCATTAGTAGCTGTATGGGGTCATTGGTCAAGCTCATGGAGTCGCCAAAACCGGTGGGGCTACAAGAATCGGCGTCGCAAGCTCTTGTTTCGCTGTTGACGGTCCGGTCGAACCGGAAAGAGTTGGTTAGGGACGAGAAGAGCGTGATGAGGCTGATTCAGATGCTGGATCCAAGAAACGAAGCAGTGAGCCACGAGTTTCCGGTGATGGTAATCTCGGCGATACTCGCCGGAGGAAGCCAGGGGTGCAGGAAGAGGCTCGCGGCGGCCGGAGCTCAGCCACATTTACAGAAGCTAGCGGAGATGGAGGTCGCCGGAGCCAAGAAGGCGTTGCAGAGACTCTCCGGCAATAGGCTAAAGACCATTTTCTCACTAACTTGGAGGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

570

Amino Acids

61.62

Weight (kDa)

6.49

Isoelectric Point (pI)

40.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7032	PF23005	20 - 128	2e-33	Domain of unknown function (DUF7032)
ARM_PUB	PF25598	168 - 350	3.1e-06	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	182 - 386	2.2e-12	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05810 AT2G05810
fragaria_vesca	FvH4_1g21781 FvH4_3g23060 FvH4_6g42120
malus_domestica	MD09G1114400.v1.1 MD17G1106100.v1.1
prunus_persica	Prupe.3G210100_v2.0.a1
pyrus_communis	pycom09g03890 pycom17g09870
rosa_chinensis	RchiOBHm_Chr2g0158031
rosa_laevigata	RLG00000005113 RLG00000009946 RLG00000011412 RLG00000014991 RLG00000021051 RLG00000034476
rosa_multiflora	Rmu_co8383981.1_g000001 Rmu_sc0000419.1_g000016 Rmu_sc0004064.1_g000016 Rmu_sc0009909.1_g000006
rosa_roxburghii	Rroxscaffold_2G00091730 Rroxscaffold_7G00168560
rosa_rugosa	Rorug02G0465300
rosa_samantha	Rh2AG531300 Rh2BG545800 Rh2CG515600 Rh2DG553900 Rh3AG074100 Rh3CG075500 Rh4AG058000 Rh4BG056800 Rh6AG401300 Rh6CG415200
rosa_wichuraiana	Rw2G043940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	609
AasI	GACNNNNNNGTC	1 cut(s)	1426
Acc36I	ACCTGC	2 cut(s)	372, 609
AccB1I	GGYRCC	2 cut(s)	896, 989
AccII	CGCG	6 cut(s)	332, 354, 557, 685, 1080, 1583
AclWI	GGATC	4 cut(s)	855, 1099, 1484, 1497
AcoI	YGGCCR	4 cut(s)	112, 324, 1224, 1587
AcuI	CTGAAG	1 cut(s)	512
AcvI	CACGTG	1 cut(s)	1141
AcyI	GRCGYC	3 cut(s)	492, 897, 1394
AfiI	CCNNNNNNNGG	8 cut(s)	117, 186, 187, 322, 425, 625, 637, 1671
AflIII	ACRYGT	2 cut(s)	276, 1138
AgeI	ACCGGT	1 cut(s)	1372
AgsI	TTSAA	5 cut(s)	502, 539, 757, 1203, 1220
AjiI	CACGTC	1 cut(s)	279
AjnI	CCWGG	3 cut(s)	809, 1107, 1560
AloI	GAACNNNNNNTCC	2 cut(s)	1128, 1160
Alw21I	GWGCWC	5 cut(s)	11, 387, 1124, 1146, 1597
Alw26I	GTCTC	6 cut(s)	56, 525, 658, 721, 1121, 1651
AlwI	GGATC	4 cut(s)	855, 1099, 1484, 1497
AlwNI	CAGNNNCTG	1 cut(s)	1486
Ama87I	CYCGRG	3 cut(s)	418, 425, 1185
ApeKI	GCWGC	3 cut(s)	121, 367, 478
ArsI	GACNNNNNNTTYG	2 cut(s)	665, 697
AsiGI	ACCGGT	1 cut(s)	1372
Asp700I	GAANNNNTTC	1 cut(s)	855
AspLEI	GCGC	4 cut(s)	246, 687, 899, 1184
AspS9I	GGNCC	8 cut(s)	102, 189, 253, 422, 463, 628, 716, 1423
AsuC2I	CCSGG	8 cut(s)	419, 420, 426, 427, 461, 475, 800, 865
AsuHPI	GGTGA	8 cut(s)	85, 277, 331, 463, 590, 781, 988, 1537
AsuII	TTCGAA	1 cut(s)	1283
AsuNHI	GCTAGC	1 cut(s)	1615
AvaI	CYCGRG	3 cut(s)	418, 425, 1185
AvaII	GGWCC	5 cut(s)	102, 422, 463, 628, 1423
BamHI	GGATCC	1 cut(s)	1489
BanI	GGYRCC	2 cut(s)	896, 989
BanII	GRGCYC	3 cut(s)	1124, 1179, 1597
BauI	CACGAG	1 cut(s)	1514
BbrPI	CACGTG	1 cut(s)	1141
BbsI	GAAGAC	1 cut(s)	546
Bbv12I	GWGCWC	5 cut(s)	11, 387, 1124, 1146, 1597
BbvI	GCAGC	3 cut(s)	133, 354, 465
BccI	CCATC	6 cut(s)	410, 1001, 1160, 1301, 1522, 1618
BceAI	ACGGC	4 cut(s)	635, 761, 844, 951
BcgI	CGANNNNNNTGC	2 cut(s)	121, 155
BciT130I	CCWGG	3 cut(s)	811, 1109, 1562
BclI	TGATCA	1 cut(s)	1065
BcnI	CCSGG	8 cut(s)	419, 420, 426, 427, 461, 475, 800, 865
BcoDI	GTCTC	6 cut(s)	56, 525, 658, 721, 1121, 1651
BfaI	CTAG	1 cut(s)	1616
BfmI	CTRYAG	1 cut(s)	1085
BfoI	RGCGCY	2 cut(s)	247, 900
BfuAI	ACCTGC	2 cut(s)	372, 609
BglI	GCCNNNNNGGC	2 cut(s)	782, 1646
BglII	AGATCT	1 cut(s)	374
BlpI	GCTNAGC	2 cut(s)	1118, 1596
Bme18I	GGWCC	5 cut(s)	102, 422, 463, 628, 1423
BmeT110I	CYCGRG	3 cut(s)	418, 425, 1185
BmgBI	CACGTC	1 cut(s)	279
BmgT120I	GGNCC	8 cut(s)	102, 189, 253, 422, 463, 628, 716, 1423
BmiI	GGNNCC	8 cut(s)	423, 424, 464, 629, 898, 991, 1491, 1639
BmrI	ACTGGG	1 cut(s)	196
BmsI	GCATC	3 cut(s)	1086, 1178, 1473
BmtI	GCTAGC	1 cut(s)	1619
BmuI	ACTGGG	1 cut(s)	196
BoxI	GACNNNNGTC	2 cut(s)	158, 563
BpiI	GAAGAC	1 cut(s)	546
BplI	GAGNNNNNCTC	2 cut(s)	53, 85
BpmI	CTGGAG	4 cut(s)	134, 224, 536, 1241
Bpu1102I	GCTNAGC	2 cut(s)	1118, 1596
Bpu14I	TTCGAA	1 cut(s)	1283
BpuEI	CTTGAG	1 cut(s)	233
BpuMI	CCSGG	8 cut(s)	419, 420, 426, 427, 461, 475, 800, 865
BsaAI	YACGTR	1 cut(s)	1141
BsaBI	GATNNNNATC	1 cut(s)	1532
BsaHI	GRCGYC	3 cut(s)	492, 897, 1394
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	5 cut(s)	418, 425, 623, 810, 1561
BsaWI	WCCGGW	5 cut(s)	99, 1372, 1425, 1434, 1522
BsaXI	ACNNNNNCTCC	4 cut(s)	215, 245, 1128, 1158
Bsc4I	CCNNNNNNNGG	8 cut(s)	117, 186, 187, 322, 425, 625, 637, 1671
Bse118I	RCCGGY	3 cut(s)	110, 287, 1372
Bse1I	ACTGG	3 cut(s)	191, 391, 962
Bse8I	GATNNNNATC	1 cut(s)	1532
BseBI	CCWGG	3 cut(s)	811, 1109, 1562
BseDI	CCNNGG	5 cut(s)	418, 425, 623, 810, 1561
BseGI	GGATG	2 cut(s)	75, 1068
BseJI	GATNNNNATC	1 cut(s)	1532
BseLI	CCNNNNNNNGG	8 cut(s)	117, 186, 187, 322, 425, 625, 637, 1671
BseMII	CTCAG	6 cut(s)	385, 460, 716, 1109, 1281, 1610
BseNI	ACTGG	3 cut(s)	191, 391, 962
BseRI	GAGGAG	6 cut(s)	35, 194, 206, 218, 938, 971
BseX3I	CGGCCG	2 cut(s)	112, 1587
BseXI	GCAGC	3 cut(s)	133, 354, 465
BsgI	GTGCAG	1 cut(s)	1588
Bsh1236I	CGCG	6 cut(s)	332, 354, 557, 685, 1080, 1583
Bsh1285I	CGRYCG	4 cut(s)	115, 894, 1430, 1590
BshNI	GGYRCC	2 cut(s)	896, 989
BshTI	ACCGGT	1 cut(s)	1372
BsiEI	CGRYCG	4 cut(s)	115, 894, 1430, 1590
BsiHKAI	GWGCWC	5 cut(s)	11, 387, 1124, 1146, 1597
BsiHKCI	CYCGRG	3 cut(s)	418, 425, 1185
BslFI	GGGAC	6 cut(s)	319, 408, 476, 757, 880, 1466
BslI	CCNNNNNNNGG	8 cut(s)	117, 186, 187, 322, 425, 625, 637, 1671
BsmAI	GTCTC	6 cut(s)	56, 525, 658, 721, 1121, 1651
BsmBI	CGTCTC	2 cut(s)	658, 1121
BsmFI	GGGAC	6 cut(s)	319, 408, 476, 757, 880, 1466
Bso31I	GGTCTC	1 cut(s)	56
BsoBI	CYCGRG	3 cut(s)	418, 425, 1185
Bsp119I	TTCGAA	1 cut(s)	1283
Bsp1286I	GDGCHC	6 cut(s)	11, 387, 1124, 1146, 1179, 1597
Bsp143I	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
Bsp1720I	GCTNAGC	2 cut(s)	1118, 1596
BspCNI	CTCAG	6 cut(s)	384, 459, 717, 1110, 1280, 1609
BspFNI	CGCG	6 cut(s)	332, 354, 557, 685, 1080, 1583
BspLI	GGNNCC	8 cut(s)	423, 424, 464, 629, 898, 991, 1491, 1639
BspMAI	CTGCAG	1 cut(s)	1089
BspMI	ACCTGC	2 cut(s)	372, 609
BspOI	GCTAGC	1 cut(s)	1619
BspPI	GGATC	4 cut(s)	855, 1099, 1484, 1497
BspQI	GCTCTTC	1 cut(s)	1454
BspT104I	TTCGAA	1 cut(s)	1283
BspT107I	GGYRCC	2 cut(s)	896, 989
BspTNI	GGTCTC	1 cut(s)	56
BsrFI	RCCGGY	3 cut(s)	110, 287, 1372
BsrI	ACTGG	3 cut(s)	191, 391, 962
BssAI	RCCGGY	3 cut(s)	110, 287, 1372
BssECI	CCNNGG	5 cut(s)	418, 425, 623, 810, 1561
BssMI	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
BssNI	GRCGYC	3 cut(s)	492, 897, 1394
BssSI	CACGAG	1 cut(s)	1514
BssT1I	CCWWGG	1 cut(s)	623
Bst2BI	CACGAG	1 cut(s)	1514
Bst2UI	CCWGG	3 cut(s)	811, 1109, 1562
Bst4CI	ACNGT	2 cut(s)	97, 1423
Bst6I	CTCTTC	3 cut(s)	473, 1454, 1568
BstACI	GRCGYC	3 cut(s)	492, 897, 1394
BstBAI	YACGTR	1 cut(s)	1141
BstBI	TTCGAA	1 cut(s)	1283
BstC8I	GCNNGC	9 cut(s)	112, 119, 141, 383, 1085, 1320, 1401, 1581, 1617
BstDEI	CTNAG	6 cut(s)	371, 446, 725, 1118, 1267, 1596
BstF5I	GGATG	2 cut(s)	75, 1068
BstFNI	CGCG	6 cut(s)	332, 354, 557, 685, 1080, 1583
BstH2I	RGCGCY	2 cut(s)	247, 900
BstHHI	GCGC	4 cut(s)	246, 687, 899, 1184
BstKTI	GATC	7 cut(s)	377, 849, 863, 930, 1068, 1107, 1492
BstMAI	GTCTC	6 cut(s)	56, 525, 658, 721, 1121, 1651
BstMBI	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
BstMCI	CGRYCG	4 cut(s)	115, 894, 1430, 1590
BstNI	CCWGG	3 cut(s)	811, 1109, 1562
BstNSI	RCATGY	1 cut(s)	307
BstPAI	GACNNNNGTC	2 cut(s)	158, 563
BstSFI	CTRYAG	1 cut(s)	1085
BstUI	CGCG	6 cut(s)	332, 354, 557, 685, 1080, 1583
BstV1I	GCAGC	3 cut(s)	133, 354, 465
BstV2I	GAAGAC	1 cut(s)	546
BstX2I	RGATCY	2 cut(s)	374, 1489
BstYI	RGATCY	2 cut(s)	374, 1489
BstZI	CGGCCG	2 cut(s)	112, 1587
BtgZI	GCGATG	1 cut(s)	1320
BtrI	CACGTC	1 cut(s)	279
BtsCI	GGATG	2 cut(s)	75, 1068
BtsI	GCAGTG	1 cut(s)	1512
BtsIMutI	CAGTG	3 cut(s)	184, 969, 1512
BveI	ACCTGC	2 cut(s)	372, 609
Cac8I	GCNNGC	9 cut(s)	112, 119, 141, 383, 1085, 1320, 1401, 1581, 1617
CaiI	CAGNNNCTG	1 cut(s)	1486
CfoI	GCGC	4 cut(s)	246, 687, 899, 1184
Cfr10I	RCCGGY	3 cut(s)	110, 287, 1372
Cfr13I	GGNCC	8 cut(s)	102, 189, 253, 422, 463, 628, 716, 1423
Cfr9I	CCCGGG	2 cut(s)	418, 425
CpoI	CGGWCCG	1 cut(s)	1423
CseI	GACGC	4 cut(s)	321, 481, 886, 1383
CspAI	ACCGGT	1 cut(s)	1372
CspCI	CAANNNNNGTGG	2 cut(s)	1356, 1391
CspI	CGGWCCG	1 cut(s)	1423
CviAII	CATG	3 cut(s)	304, 322, 1357
DdeI	CTNAG	6 cut(s)	371, 446, 725, 1118, 1267, 1596
DinI	GGCGCC	1 cut(s)	898
DpnI	GATC	7 cut(s)	376, 848, 862, 929, 1067, 1106, 1491
DpnII	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
DrdI	GACNNNNNNGTC	1 cut(s)	1426
DseDI	GACNNNNNNGTC	1 cut(s)	1426
EaeI	YGGCCR	4 cut(s)	112, 324, 1224, 1587
EagI	CGGCCG	2 cut(s)	112, 1587
Eam1104I	CTCTTC	3 cut(s)	473, 1454, 1568
EarI	CTCTTC	3 cut(s)	473, 1454, 1568
EciI	GGCGGA	2 cut(s)	637, 1003
Ecl136II	GAGCTC	2 cut(s)	1122, 1595
EclXI	CGGCCG	2 cut(s)	112, 1587
Eco130I	CCWWGG	1 cut(s)	623
Eco24I	GRGCYC	3 cut(s)	1124, 1179, 1597
Eco31I	GGTCTC	1 cut(s)	56
Eco47I	GGWCC	5 cut(s)	102, 422, 463, 628, 1423
Eco52I	CGGCCG	2 cut(s)	112, 1587
Eco53kI	GAGCTC	2 cut(s)	1122, 1595
Eco57I	CTGAAG	1 cut(s)	512
Eco72I	CACGTG	1 cut(s)	1141
Eco88I	CYCGRG	3 cut(s)	418, 425, 1185
EcoICRI	GAGCTC	2 cut(s)	1122, 1595
EcoO109I	RGGNCCY	3 cut(s)	253, 422, 463
EcoRII	CCWGG	3 cut(s)	809, 1107, 1560
EcoT14I	CCWWGG	1 cut(s)	623
EcoT22I	ATGCAT	1 cut(s)	1101
EcoT38I	GRGCYC	3 cut(s)	1124, 1179, 1597
EgeI	GGCGCC	1 cut(s)	898
EheI	GGCGCC	1 cut(s)	898
ErhI	CCWWGG	1 cut(s)	623
Esp3I	CGTCTC	2 cut(s)	658, 1121
FaeI	CATG	3 cut(s)	307, 325, 1360
FaiI	YATR	6 cut(s)	305, 323, 1025, 1235, 1337, 1358
FaqI	GGGAC	6 cut(s)	319, 408, 476, 757, 880, 1466
FatI	CATG	3 cut(s)	303, 321, 1356
FauI	CCCGC	1 cut(s)	284
FbaI	TGATCA	1 cut(s)	1065
FokI	GGATG	2 cut(s)	62, 1055
FriOI	GRGCYC	3 cut(s)	1124, 1179, 1597
FspBI	CTAG	1 cut(s)	1616
GlaI	GCGC	4 cut(s)	245, 686, 898, 1183
GsuI	CTGGAG	4 cut(s)	134, 224, 536, 1241
HaeII	RGCGCY	2 cut(s)	247, 900
HgaI	GACGC	4 cut(s)	321, 481, 886, 1383
HhaI	GCGC	4 cut(s)	246, 687, 899, 1184
Hin1I	GRCGYC	3 cut(s)	492, 897, 1394
Hin1II	CATG	3 cut(s)	307, 325, 1360
Hin6I	GCGC	4 cut(s)	244, 685, 897, 1182
HinP1I	GCGC	4 cut(s)	244, 685, 897, 1182
HincII	GTYRAC	1 cut(s)	1419
HindII	GTYRAC	1 cut(s)	1419
HphI	GGTGA	8 cut(s)	85, 277, 331, 463, 590, 781, 988, 1537
Hpy166II	GTNNAC	2 cut(s)	285, 1419
Hpy188I	TCNGA	9 cut(s)	175, 374, 433, 632, 1058, 1126, 1148, 1174, 1482
Hpy188III	TCNNGA	6 cut(s)	151, 502, 515, 536, 844, 931
Hpy8I	GTNNAC	2 cut(s)	285, 1419
HpyAV	CCTTC	8 cut(s)	115, 502, 569, 698, 751, 757, 944, 1639
HpyCH4III	ACNGT	2 cut(s)	97, 1423
HpyCH4IV	ACGT	6 cut(s)	278, 582, 909, 918, 1130, 1140
HpyCH4V	TGCA	9 cut(s)	4, 270, 307, 481, 1023, 1087, 1099, 1569, 1654
HpyF3I	CTNAG	6 cut(s)	371, 446, 725, 1118, 1267, 1596
HpySE526I	ACGT	6 cut(s)	278, 582, 909, 918, 1130, 1140
Hsp92I	GRCGYC	3 cut(s)	492, 897, 1394
Hsp92II	CATG	3 cut(s)	307, 325, 1360
HspAI	GCGC	4 cut(s)	244, 685, 897, 1182
KasI	GGCGCC	1 cut(s)	896
KflI	GGGWCCC	1 cut(s)	422
KroI	GCCGGC	1 cut(s)	110
KroNI	GCCGGC	1 cut(s)	112
Ksp22I	TGATCA	1 cut(s)	1065
Kzo9I	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
LguI	GCTCTTC	1 cut(s)	1454
LmnI	GCTCC	7 cut(s)	303, 354, 390, 984, 1149, 1592, 1637
Lsp1109I	GCAGC	3 cut(s)	133, 354, 465
LweI	GCATC	3 cut(s)	1086, 1178, 1473
MaeI	CTAG	1 cut(s)	1616
MaeII	ACGT	6 cut(s)	278, 582, 909, 918, 1130, 1140
MalI	GATC	7 cut(s)	376, 848, 862, 929, 1067, 1106, 1491
MboI	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
MboII	GAAGA	7 cut(s)	460, 517, 551, 959, 1191, 1471, 1585
MfeI	CAATTG	3 cut(s)	974, 1018, 1220
MflI	RGATCY	2 cut(s)	374, 1489
MhlI	GDGCHC	6 cut(s)	11, 387, 1124, 1146, 1179, 1597
MluCI	AATT	5 cut(s)	974, 1018, 1215, 1220, 1293
Mly113I	GGCGCC	1 cut(s)	897
MlyI	GAGTC	6 cut(s)	170, 527, 689, 1197, 1370, 1653
MmeI	TCCRAC	3 cut(s)	198, 411, 1113
Mph1103I	ATGCAT	1 cut(s)	1101
MroNI	GCCGGC	1 cut(s)	110
MroXI	GAANNNNTTC	1 cut(s)	855
MspA1I	CMGCKG	1 cut(s)	117
MunI	CAATTG	3 cut(s)	974, 1018, 1220
MvaI	CCWGG	3 cut(s)	811, 1109, 1562
MvnI	CGCG	6 cut(s)	332, 354, 557, 685, 1080, 1583
NaeI	GCCGGC	1 cut(s)	112
NarI	GGCGCC	1 cut(s)	897
NciI	CCSGG	8 cut(s)	419, 420, 426, 427, 461, 475, 800, 865
NdeII	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
NgoMIV	GCCGGC	1 cut(s)	110
NheI	GCTAGC	1 cut(s)	1615
NlaIII	CATG	3 cut(s)	307, 325, 1360
NlaIV	GGNNCC	8 cut(s)	423, 424, 464, 629, 898, 991, 1491, 1639
NmeAIII	GCCGAG	3 cut(s)	217, 1252, 1517
NsiI	ATGCAT	1 cut(s)	1101
NspI	RCATGY	1 cut(s)	307
NspV	TTCGAA	1 cut(s)	1283
PaeR7I	CTCGAG	1 cut(s)	1185
PaqCI	CACCTGC	1 cut(s)	609
PciSI	GCTCTTC	1 cut(s)	1454
PcsI	WCGNNNNNNNCGW	4 cut(s)	492, 915, 1427, 1461
PdiI	GCCGGC	1 cut(s)	112
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	7 cut(s)	442, 595, 737, 851, 1285, 1388, 1477
PfoI	TCCNGGA	3 cut(s)	459, 863, 1107
PinAI	ACCGGT	1 cut(s)	1372
PleI	GAGTC	6 cut(s)	170, 526, 688, 1196, 1369, 1653
PluTI	GGCGCC	1 cut(s)	900
PmaCI	CACGTG	1 cut(s)	1141
PmlI	CACGTG	1 cut(s)	1141
PpsI	GAGTC	6 cut(s)	170, 526, 688, 1196, 1369, 1653
Ppu21I	YACGTR	1 cut(s)	1141
PpuMI	RGGWCCY	2 cut(s)	422, 463
PshAI	GACNNNNGTC	2 cut(s)	158, 563
Psp124BI	GAGCTC	2 cut(s)	1124, 1597
Psp5II	RGGWCCY	2 cut(s)	422, 463
Psp6I	CCWGG	3 cut(s)	809, 1107, 1560
PspCI	CACGTG	1 cut(s)	1141
PspGI	CCWGG	3 cut(s)	809, 1107, 1560
PspN4I	GGNNCC	8 cut(s)	423, 424, 464, 629, 898, 991, 1491, 1639
PspPI	GGNCC	8 cut(s)	102, 189, 253, 422, 463, 628, 716, 1423
PspPPI	RGGWCCY	2 cut(s)	422, 463
PspXI	VCTCGAGB	1 cut(s)	1185
PstI	CTGCAG	1 cut(s)	1089
PstNI	CAGNNNCTG	1 cut(s)	1486
PsuI	RGATCY	2 cut(s)	374, 1489
Rsr2I	CGGWCCG	1 cut(s)	1423
RsrII	CGGWCCG	1 cut(s)	1423
SacI	GAGCTC	2 cut(s)	1124, 1597
SapI	GCTCTTC	1 cut(s)	1454
Sau3AI	GATC	7 cut(s)	374, 846, 860, 927, 1065, 1104, 1489
Sau96I	GGNCC	8 cut(s)	102, 189, 253, 422, 463, 628, 716, 1423
SchI	GAGTC	6 cut(s)	170, 527, 689, 1197, 1370, 1653
SduI	GDGCHC	6 cut(s)	11, 387, 1124, 1146, 1179, 1597
SfaNI	GCATC	3 cut(s)	1086, 1178, 1473
SfcI	CTRYAG	1 cut(s)	1085
SfoI	GGCGCC	1 cut(s)	898
Sfr274I	CTCGAG	1 cut(s)	1185
SfuI	TTCGAA	1 cut(s)	1283
SgrAI	CRCCGGYG	1 cut(s)	287
SinI	GGWCC	5 cut(s)	102, 422, 463, 628, 1423
SlaI	CTCGAG	1 cut(s)	1185
SmaI	CCCGGG	2 cut(s)	420, 427
SmlI	CTYRAG	2 cut(s)	248, 1185
SmoI	CTYRAG	2 cut(s)	248, 1185
Sse9I	AATT	5 cut(s)	974, 1018, 1215, 1220, 1293
SspDI	GGCGCC	1 cut(s)	896
SspMI	CTAG	1 cut(s)	1616
SstI	GAGCTC	2 cut(s)	1124, 1597
StyI	CCWWGG	1 cut(s)	623
TaaI	ACNGT	2 cut(s)	97, 1423
TaiI	ACGT	6 cut(s)	281, 585, 912, 921, 1133, 1143
TaqII	GACCGA	2 cut(s)	829, 880
TasI	AATT	5 cut(s)	974, 1018, 1215, 1220, 1293
TfiI	GAWTC	7 cut(s)	442, 595, 737, 851, 1285, 1388, 1477
TscAI	CASTG	3 cut(s)	191, 969, 1512
TseI	GCWGC	3 cut(s)	121, 367, 478
TspDTI	ATGAA	1 cut(s)	1222
TspGWI	ACGGA	1 cut(s)	148
TspMI	CCCGGG	2 cut(s)	418, 425
TspRI	CASTG	3 cut(s)	191, 969, 1512
VpaK11BI	GGWCC	5 cut(s)	102, 422, 463, 628, 1423
XceI	RCATGY	1 cut(s)	307
XcmI	CCANNNNNNNNNTGG	1 cut(s)	907
XhoI	CTCGAG	1 cut(s)	1185
XmaI	CCCGGG	2 cut(s)	418, 425
XmnI	GAANNNNTTC	1 cut(s)	855
XspI	CTAG	1 cut(s)	1616
Zsp2I	ATGCAT	1 cut(s)	1101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.