Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0003535

Physical Location & Seq

Genomic Coordinates Reverse (-)

7537718 .. 7539430

Gene Structure 1713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g09870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGCATCGCCCCGCCGCCGCCGCAAACCCACTCCAAACCCTCCTCGACCTCGTCAACTCCACCCTCTCTCTCCTCCTCCGCTCCTCCCTCACCGTCCGCTCCTTCGTCGGCCGCTGGACCGCCATCCACTCCAAGCTCGCATCCCTGCACTCCTCCGTCGCTGACATCTCCGACTCCCCCCACTGGGCCCAGAACCCCCTCCTCCACACCCTCCTACCTCAACTCCTCTCCACTCTCCAGCGCCTCACTGCCCTCGCCGACCAATGTACCGACGCCGAGTTCGCCGGCGGGAAGCTCCTGATGCAGAGCGACCTCGATATGGCTTCGTCTTCCCTCTCCAATCAGCTTCGCGACCTCGACTTGCTTCTCAGATCTGGAGTCCTCCACCAGTCAAACGCCATCGTTTTGTCGCACCCGGCTCCCGGGTCGGATAAAGAGGATATGGGCTTCTTTATCAGAGACCTCTTCACCCGGCTGCAAATCGGCGGCGTCGAGTTCAAGAAAAAGGCTCTTGAGTCGCTCCTTCAGCTCCTCAACGGCGACGACAAGTCGTCCGGCCTCATCGTCAGAGAAGGTAACGTCGCATATTTGATTCATTTGCTTGATTTCCACCACCAGCCTTCCGTCCGCGAGCAGGCTATCTTCGCCGTCTGTCTCCTGGCCACCGCGGACGACGAGTCGTCGCGCAAGGCAGTGTTCGAAGAAGGGGGTCTGGGTCCTCTGCTGAGAATACTCGAATCCGGGTCGACCCATTTGAAAGAGAAGGCTGCGATGGCGGTAGAGGCGCTCACCGCCGACCCAGAAAACGCCTGGGCCGTTTCCGCCTACGGTGGCGTCTCAGTCCTCATCGAAGCCTGCCGATCTGGGTCTCCGGTGACCCAAACCCATGCTGCCGGAGCCATTAGAAATGTGGTCAATGTGGAAGAAATCAAAACTGCTCTGGGAGAAGAAGGAGCCGTCCCTGTACTAATCCAGTTACTGCTCTCCGGCACTATCACCGCCCAAGAAAAATCAGCCAATTGCATAGCCATTTTAGCCTCCTCCGACGAGTATTTCCGAGCTTTGATCATTCAAGAACGTGGGTTGCAGAGATTAATGCATTTGATTCAAGATTTACCGAATTCGGACACATTGGAACACGTCCTCCGAGCCATCACATGGCTTTCAGCTTCAGATTCCTGCTCTAAAATCCTCTCTTCTTCGACGATTTTCTTGATTCAGCTCGGCGAGTTCATAAAGCAGGGGAACACAACGCTACAGCAAATCTCAGCCTCCTTACTCGCTCACTTATTGGTAAATGTGAGCGATGGGAATAAGCGAGCGTTGGGCATCTGTATGGGGTCGTTGGTAAAGCTCATGGAGTCGCCAAAACCGGTGGGCCTGCAAGAATCGGCGGCCCAATCGCTGGTTTCGCTGCTGACGGTCCGGTCGAACCGGAAGGAGCTGGTGAGGGACGAGAAGAGCGTGATGAGGCTGGTCCAGATGCTGGACGCCAAGAGTCACGAGATGGTGGCCAGCAAGTTTCCGGTGTCGGTGGTCGCGGCGGTTCTCAGCGGAGGGAGCGGTGGTTGCCGGAAAAGGCTGGTGGCCGCCGGAGCTCACCCGCATTTGCAGAGACTGGCGGAAATGGACGTCGCCGGAGCTAAGAAAGCGCTGCAGAGACTCGCCGGCAGTAGGCTGAAGACCATCTTCTCGCGGAGTTGGAGGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

571

Amino Acids

61.45

Weight (kDa)

7.31

Isoelectric Point (pI)

45.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7032	PF23005	20 - 127	2.8e-33	Domain of unknown function (DUF7032)
ARM_ARMC5	PF24768	183 - 385	2.4e-13	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05810 AT2G05810
fragaria_vesca	FvH4_1g21781 FvH4_3g23060 FvH4_6g42120
malus_domestica	MD09G1114400.v1.1 MD17G1106100.v1.1
prunus_persica	Prupe.3G210100_v2.0.a1
pyrus_communis	pycom09g03890 pycom17g09870
rosa_chinensis	RchiOBHm_Chr2g0158031
rosa_laevigata	RLG00000005113 RLG00000009946 RLG00000011412 RLG00000014991 RLG00000021051 RLG00000034476
rosa_multiflora	Rmu_co8383981.1_g000001 Rmu_sc0000419.1_g000016 Rmu_sc0004064.1_g000016 Rmu_sc0009909.1_g000006
rosa_roxburghii	Rroxscaffold_2G00091730 Rroxscaffold_7G00168560
rosa_rugosa	Rorug02G0465300
rosa_samantha	Rh2AG531300 Rh2BG545800 Rh2CG515600 Rh2DG553900 Rh3AG074100 Rh3CG075500 Rh4AG058000 Rh4BG056800 Rh6AG401300 Rh6CG415200
rosa_wichuraiana	Rw2G043940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1426
AatII	GACGTC	1 cut(s)	1635
AccB7I	CCANNNNNTGG	3 cut(s)	1158, 1405, 1486
AccBSI	CCGCTC	3 cut(s)	81, 99, 1563
AccI	GTMKAC	1 cut(s)	746
AccII	CGCG	6 cut(s)	351, 630, 668, 685, 1541, 1696
AcoI	YGGCCR	4 cut(s)	109, 660, 1512, 1587
AcsI	RAATTY	1 cut(s)	1120
AcuI	CTGAAG	3 cut(s)	509, 1155, 1700
AcyI	GRCGYC	5 cut(s)	273, 489, 834, 1491, 1632
AfaI	GTAC	2 cut(s)	268, 966
AfeI	AGCGCT	1 cut(s)	1653
AfiI	CCNNNNNNNGG	9 cut(s)	183, 184, 319, 422, 634, 1158, 1405, 1486, 1674
AflIII	ACRYGT	1 cut(s)	1138
AgeI	ACCGGT	1 cut(s)	1372
AgsI	TTSAA	4 cut(s)	499, 757, 1073, 1109
AhdI	GACNNNNNGTC	4 cut(s)	547, 550, 676, 679
AjiI	CACGTC	1 cut(s)	1141
AjnI	CCWGG	2 cut(s)	657, 809
AloI	GAACNNNNNNTCC	2 cut(s)	1128, 1160
Alw21I	GWGCWC	1 cut(s)	1600
Alw26I	GTCTC	6 cut(s)	453, 659, 841, 873, 1609, 1654
AlwNI	CAGNNNCTG	3 cut(s)	979, 1486, 1618
Ama87I	CYCGRG	1 cut(s)	422
Aor51HI	AGCGCT	1 cut(s)	1653
AoxI	GGCC	9 cut(s)	109, 186, 556, 660, 813, 1378, 1395, 1512, 1587
ApaI	GGGCCC	1 cut(s)	190
ApeKI	GCWGC	5 cut(s)	475, 767, 890, 1414, 1654
ApoI	RAATTY	1 cut(s)	1120
ArsI	GACNNNNNNTTYG	2 cut(s)	263, 295
AseI	ATTAAT	1 cut(s)	1094
AsiGI	ACCGGT	1 cut(s)	1372
AspLEI	GCGC	4 cut(s)	243, 687, 787, 1654
AspS9I	GGNCC	9 cut(s)	117, 186, 187, 716, 813, 1378, 1396, 1423, 1477
AsuC2I	CCSGG	5 cut(s)	416, 423, 424, 472, 742
AsuHPI	GGTGA	7 cut(s)	82, 460, 781, 886, 988, 1459, 1592
AsuII	TTCGAA	1 cut(s)	699
AvaI	CYCGRG	1 cut(s)	422
AvaII	GGWCC	4 cut(s)	117, 716, 1423, 1477
BaeGI	GKGCMC	1 cut(s)	190
BaeI	ACNNNNGTAYC	2 cut(s)	250, 283
BalI	TGGCCA	2 cut(s)	662, 1514
BanII	GRGCYC	2 cut(s)	190, 1600
BauI	CACGAG	1 cut(s)	1502
BbsI	GAAGAC	2 cut(s)	321, 1688
Bbv12I	GWGCWC	1 cut(s)	1600
BbvI	GCAGC	5 cut(s)	462, 754, 877, 1401, 1641
BccI	CCATC	7 cut(s)	131, 407, 766, 1160, 1301, 1501, 1694
BceAI	ACGGC	4 cut(s)	553, 632, 800, 941
BciT130I	CCWGG	2 cut(s)	659, 811
BclI	TGATCA	1 cut(s)	1065
BcnI	CCSGG	5 cut(s)	416, 423, 424, 472, 742
BcoDI	GTCTC	6 cut(s)	453, 659, 841, 873, 1609, 1654
BfmI	CTRYAG	2 cut(s)	1256, 1655
BfoI	RGCGCY	3 cut(s)	244, 788, 1655
BglII	AGATCT	1 cut(s)	371
Bme1390I	CCNGG	7 cut(s)	416, 423, 424, 472, 659, 742, 811
Bme18I	GGWCC	4 cut(s)	117, 716, 1423, 1477
BmeRI	GACNNNNNGTC	4 cut(s)	547, 550, 676, 679
BmeT110I	CYCGRG	1 cut(s)	422
BmgBI	CACGTC	1 cut(s)	1141
BmgT120I	GGNCC	9 cut(s)	117, 186, 187, 716, 813, 1378, 1396, 1423, 1477
BmiI	GGNNCC	5 cut(s)	188, 420, 717, 898, 955
BmrFI	CCNGG	7 cut(s)	416, 423, 424, 472, 659, 742, 811
BmrI	ACTGGG	1 cut(s)	193
BmsI	GCATC	5 cut(s)	13, 149, 291, 1338, 1473
BmuI	ACTGGG	1 cut(s)	193
BpiI	GAAGAC	2 cut(s)	321, 1688
BpmI	CTGGAG	2 cut(s)	221, 396
Bpu14I	TTCGAA	1 cut(s)	699
BpuEI	CTTGAG	1 cut(s)	533
BpuMI	CCSGG	5 cut(s)	416, 423, 424, 472, 742
BsaHI	GRCGYC	5 cut(s)	273, 489, 834, 1491, 1632
BsaI	GGTCTC	2 cut(s)	453, 873
BsaJI	CCNNGG	3 cut(s)	422, 666, 810
BsaWI	WCCGGW	5 cut(s)	871, 1372, 1425, 1434, 1525
BsaXI	ACNNNNNCTCC	6 cut(s)	207, 237, 1128, 1158, 1552, 1582
Bsc4I	CCNNNNNNNGG	9 cut(s)	183, 184, 319, 422, 634, 1158, 1405, 1486, 1674
Bse118I	RCCGGY	3 cut(s)	284, 1372, 1667
Bse1I	ACTGG	4 cut(s)	188, 388, 973, 1623
BseBI	CCWGG	2 cut(s)	659, 811
BseDI	CCNNGG	3 cut(s)	422, 666, 810
BseGI	GGATG	2 cut(s)	123, 140
BseLI	CCNNNNNNNGG	9 cut(s)	183, 184, 319, 422, 634, 1158, 1405, 1486, 1674
BseMII	CTCAG	5 cut(s)	382, 716, 852, 1281, 1564
BseNI	ACTGG	4 cut(s)	188, 388, 973, 1623
BseRI	GAGGAG	9 cut(s)	32, 62, 65, 73, 142, 191, 215, 521, 1030
BseSI	GKGCMC	1 cut(s)	190
BseX3I	CGGCCG	1 cut(s)	109
BseXI	GCAGC	5 cut(s)	462, 754, 877, 1401, 1641
BsgI	GTGCAG	1 cut(s)	131
Bsh1236I	CGCG	6 cut(s)	351, 630, 668, 685, 1541, 1696
Bsh1285I	CGRYCG	2 cut(s)	112, 1430
BshFI	GGCC	9 cut(s)	111, 188, 558, 662, 815, 1380, 1397, 1514, 1589
BshTI	ACCGGT	1 cut(s)	1372
BsiEI	CGRYCG	2 cut(s)	112, 1430
BsiHKAI	GWGCWC	1 cut(s)	1600
BsiHKCI	CYCGRG	1 cut(s)	422
BslFI	GGGAC	2 cut(s)	944, 1466
BslI	CCNNNNNNNGG	9 cut(s)	183, 184, 319, 422, 634, 1158, 1405, 1486, 1674
BsmAI	GTCTC	6 cut(s)	453, 659, 841, 873, 1609, 1654
BsmBI	CGTCTC	1 cut(s)	841
BsmFI	GGGAC	2 cut(s)	944, 1466
BsnI	GGCC	9 cut(s)	111, 188, 558, 662, 815, 1380, 1397, 1514, 1589
Bso31I	GGTCTC	2 cut(s)	453, 873
BsoBI	CYCGRG	1 cut(s)	422
Bsp119I	TTCGAA	1 cut(s)	699
Bsp120I	GGGCCC	1 cut(s)	186
Bsp1286I	GDGCHC	2 cut(s)	190, 1600
Bsp143I	GATC	3 cut(s)	371, 860, 1065
Bsp68I	TCGCGA	1 cut(s)	351
BspANI	GGCC	9 cut(s)	111, 188, 558, 662, 815, 1380, 1397, 1514, 1589
BspCNI	CTCAG	5 cut(s)	381, 717, 851, 1280, 1563
BspFNI	CGCG	6 cut(s)	351, 630, 668, 685, 1541, 1696
BspLI	GGNNCC	5 cut(s)	188, 420, 717, 898, 955
BspMAI	CTGCAG	1 cut(s)	1659
BspQI	GCTCTTC	1 cut(s)	1454
BspT104I	TTCGAA	1 cut(s)	699
BspTNI	GGTCTC	2 cut(s)	453, 873
BsrBI	CCGCTC	3 cut(s)	81, 99, 1563
BsrFI	RCCGGY	3 cut(s)	284, 1372, 1667
BsrI	ACTGG	4 cut(s)	188, 388, 973, 1623
BssAI	RCCGGY	3 cut(s)	284, 1372, 1667
BssECI	CCNNGG	3 cut(s)	422, 666, 810
BssMI	GATC	3 cut(s)	371, 860, 1065
BssNI	GRCGYC	5 cut(s)	273, 489, 834, 1491, 1632
BssSI	CACGAG	1 cut(s)	1502
Bst2BI	CACGAG	1 cut(s)	1502
Bst2UI	CCWGG	2 cut(s)	659, 811
Bst4CI	ACNGT	3 cut(s)	94, 830, 1423
Bst6I	CTCTTC	3 cut(s)	470, 1201, 1454
BstACI	GRCGYC	5 cut(s)	273, 489, 834, 1491, 1632
BstBI	TTCGAA	1 cut(s)	699
BstC8I	GCNNGC	9 cut(s)	138, 286, 632, 636, 856, 1320, 1382, 1516, 1669
BstDEI	CTNAG	6 cut(s)	368, 725, 838, 1267, 1550, 1644
BstDSI	CCRYGG	1 cut(s)	666
BstEII	GGTNACC	1 cut(s)	874
BstF5I	GGATG	2 cut(s)	123, 140
BstFNI	CGCG	6 cut(s)	351, 630, 668, 685, 1541, 1696
BstH2I	RGCGCY	3 cut(s)	244, 788, 1655
BstHHI	GCGC	4 cut(s)	243, 687, 787, 1654
BstKTI	GATC	3 cut(s)	374, 863, 1068
BstMAI	GTCTC	6 cut(s)	453, 659, 841, 873, 1609, 1654
BstMBI	GATC	3 cut(s)	371, 860, 1065
BstMCI	CGRYCG	2 cut(s)	112, 1430
BstNI	CCWGG	2 cut(s)	659, 811
BstPI	GGTNACC	1 cut(s)	874
BstSCI	CCNGG	7 cut(s)	414, 421, 422, 470, 657, 740, 809
BstSFI	CTRYAG	2 cut(s)	1256, 1655
BstSLI	GKGCMC	1 cut(s)	190
BstUI	CGCG	6 cut(s)	351, 630, 668, 685, 1541, 1696
BstV1I	GCAGC	5 cut(s)	462, 754, 877, 1401, 1641
BstV2I	GAAGAC	2 cut(s)	321, 1688
BstX2I	RGATCY	1 cut(s)	371
BstYI	RGATCY	1 cut(s)	371
BstZI	CGGCCG	1 cut(s)	109
BsuRI	GGCC	9 cut(s)	111, 188, 558, 662, 815, 1380, 1397, 1514, 1589
BtgI	CCRYGG	1 cut(s)	666
BtgZI	GCGATG	2 cut(s)	785, 1320
BtrI	CACGTC	1 cut(s)	1141
BtsCI	GGATG	2 cut(s)	123, 140
BtsI	GCAGTG	2 cut(s)	246, 699
BtsIMutI	CAGTG	3 cut(s)	181, 246, 699
BtuMI	TCGCGA	1 cut(s)	351
Cac8I	GCNNGC	9 cut(s)	138, 286, 632, 636, 856, 1320, 1382, 1516, 1669
CaiI	CAGNNNCTG	3 cut(s)	979, 1486, 1618
CfoI	GCGC	4 cut(s)	243, 687, 787, 1654
Cfr10I	RCCGGY	3 cut(s)	284, 1372, 1667
Cfr13I	GGNCC	9 cut(s)	117, 186, 187, 716, 813, 1378, 1396, 1423, 1477
Cfr42I	CCGCGG	1 cut(s)	669
Cfr9I	CCCGGG	1 cut(s)	422
CpoI	CGGWCCG	1 cut(s)	1423
CseI	GACGC	4 cut(s)	281, 478, 823, 1499
Csp6I	GTAC	2 cut(s)	267, 965
CspAI	ACCGGT	1 cut(s)	1372
CspCI	CAANNNNNGTGG	2 cut(s)	1356, 1391
CspI	CGGWCCG	1 cut(s)	1423
CviAII	CATG	3 cut(s)	887, 1158, 1357
CviQI	GTAC	2 cut(s)	267, 965
DdeI	CTNAG	6 cut(s)	368, 725, 838, 1267, 1550, 1644
DpnI	GATC	3 cut(s)	373, 862, 1067
DpnII	GATC	3 cut(s)	371, 860, 1065
DrdI	GACNNNNNNGTC	1 cut(s)	1426
DriI	GACNNNNNGTC	4 cut(s)	547, 550, 676, 679
DseDI	GACNNNNNNGTC	1 cut(s)	1426
EaeI	YGGCCR	4 cut(s)	109, 660, 1512, 1587
EagI	CGGCCG	1 cut(s)	109
Eam1104I	CTCTTC	3 cut(s)	470, 1201, 1454
Eam1105I	GACNNNNNGTC	4 cut(s)	547, 550, 676, 679
EarI	CTCTTC	3 cut(s)	470, 1201, 1454
EciI	GGCGGA	2 cut(s)	811, 1637
Ecl136II	GAGCTC	1 cut(s)	1598
EclXI	CGGCCG	1 cut(s)	109
Eco24I	GRGCYC	2 cut(s)	190, 1600
Eco31I	GGTCTC	2 cut(s)	453, 873
Eco47I	GGWCC	4 cut(s)	117, 716, 1423, 1477
Eco47III	AGCGCT	1 cut(s)	1653
Eco52I	CGGCCG	1 cut(s)	109
Eco53kI	GAGCTC	1 cut(s)	1598
Eco57I	CTGAAG	3 cut(s)	509, 1155, 1700
Eco88I	CYCGRG	1 cut(s)	422
Eco91I	GGTNACC	1 cut(s)	874
EcoICRI	GAGCTC	1 cut(s)	1598
EcoO109I	RGGNCCY	1 cut(s)	716
EcoO65I	GGTNACC	1 cut(s)	874
EcoRI	GAATTC	1 cut(s)	1120
EcoRII	CCWGG	2 cut(s)	657, 809
EcoT22I	ATGCAT	2 cut(s)	6, 1101
EcoT38I	GRGCYC	2 cut(s)	190, 1600
Esp3I	CGTCTC	1 cut(s)	841
FaeI	CATG	3 cut(s)	890, 1161, 1360
FaiI	YATR	9 cut(s)	320, 443, 586, 888, 1025, 1159, 1235, 1337, 1358
FalI	AAGNNNNNCTT	2 cut(s)	1673, 1705
FaqI	GGGAC	2 cut(s)	944, 1466
FatI	CATG	3 cut(s)	886, 1157, 1356
FauI	CCCGC	3 cut(s)	19, 281, 1611
FbaI	TGATCA	1 cut(s)	1065
FblI	GTMKAC	1 cut(s)	746
FokI	GGATG	2 cut(s)	110, 127
FriOI	GRGCYC	2 cut(s)	190, 1600
GlaI	GCGC	4 cut(s)	242, 686, 786, 1653
GsuI	CTGGAG	2 cut(s)	221, 396
HaeII	RGCGCY	3 cut(s)	244, 788, 1655
HaeIII	GGCC	9 cut(s)	111, 188, 558, 662, 815, 1380, 1397, 1514, 1589
HgaI	GACGC	4 cut(s)	281, 478, 823, 1499
HhaI	GCGC	4 cut(s)	243, 687, 787, 1654
Hin1I	GRCGYC	5 cut(s)	273, 489, 834, 1491, 1632
Hin1II	CATG	3 cut(s)	890, 1161, 1360
Hin6I	GCGC	4 cut(s)	241, 685, 785, 1652
HinP1I	GCGC	4 cut(s)	241, 685, 785, 1652
HincII	GTYRAC	2 cut(s)	55, 747
HindII	GTYRAC	2 cut(s)	55, 747
HphI	GGTGA	7 cut(s)	82, 460, 781, 886, 988, 1459, 1592
Hpy166II	GTNNAC	2 cut(s)	55, 747
Hpy8I	GTNNAC	2 cut(s)	55, 747
HpyAV	CCTTC	8 cut(s)	112, 533, 566, 630, 698, 757, 944, 1432
HpyCH4III	ACNGT	3 cut(s)	94, 830, 1423
HpyCH4IV	ACGT	4 cut(s)	579, 1078, 1140, 1632
HpyF3I	CTNAG	6 cut(s)	368, 725, 838, 1267, 1550, 1644
HpySE526I	ACGT	4 cut(s)	579, 1078, 1140, 1632
Hsp92I	GRCGYC	5 cut(s)	273, 489, 834, 1491, 1632
Hsp92II	CATG	3 cut(s)	890, 1161, 1360
HspAI	GCGC	4 cut(s)	241, 685, 785, 1652
KroI	GCCGGC	2 cut(s)	284, 1667
KroNI	GCCGGC	2 cut(s)	286, 1669
Ksp22I	TGATCA	1 cut(s)	1065
KspI	CCGCGG	1 cut(s)	669
Kzo9I	GATC	3 cut(s)	371, 860, 1065
LguI	GCTCTTC	1 cut(s)	1454
Lsp1109I	GCAGC	5 cut(s)	462, 754, 877, 1401, 1641
LweI	GCATC	5 cut(s)	13, 149, 291, 1338, 1473
MaeII	ACGT	4 cut(s)	579, 1078, 1140, 1632
MaeIII	GTNAC	4 cut(s)	575, 874, 975, 1499
MalI	GATC	3 cut(s)	373, 862, 1067
MbiI	CCGCTC	3 cut(s)	81, 99, 1563
MboI	GATC	3 cut(s)	371, 860, 1065
MfeI	CAATTG	1 cut(s)	1018
MflI	RGATCY	1 cut(s)	371
MhlI	GDGCHC	2 cut(s)	190, 1600
MlsI	TGGCCA	2 cut(s)	662, 1514
MluCI	AATT	2 cut(s)	1018, 1120
MluNI	TGGCCA	2 cut(s)	662, 1514
MlyI	GAGTC	7 cut(s)	167, 387, 524, 686, 1370, 1507, 1656
MmeI	TCCRAC	4 cut(s)	195, 408, 1068, 1682
Mox20I	TGGCCA	2 cut(s)	662, 1514
Mph1103I	ATGCAT	2 cut(s)	6, 1101
MreI	CGCCGGCG	1 cut(s)	284
MroNI	GCCGGC	2 cut(s)	284, 1667
MscI	TGGCCA	2 cut(s)	662, 1514
MseI	TTAA	1 cut(s)	1094
MslI	CAYNNNNRTG	1 cut(s)	1334
Msp20I	TGGCCA	2 cut(s)	662, 1514
MspA1I	CMGCKG	3 cut(s)	114, 668, 1554
MspR9I	CCNGG	7 cut(s)	416, 423, 424, 472, 659, 742, 811
MunI	CAATTG	1 cut(s)	1018
MvaI	CCWGG	2 cut(s)	659, 811
MvnI	CGCG	6 cut(s)	351, 630, 668, 685, 1541, 1696
NaeI	GCCGGC	2 cut(s)	286, 1669
NciI	CCSGG	5 cut(s)	416, 423, 424, 472, 742
NdeII	GATC	3 cut(s)	371, 860, 1065
NgoMIV	GCCGGC	2 cut(s)	284, 1667
NlaIII	CATG	3 cut(s)	890, 1161, 1360
NlaIV	GGNNCC	5 cut(s)	188, 420, 717, 898, 955
NmeAIII	GCCGAG	2 cut(s)	301, 1203
NmuCI	GTSAC	2 cut(s)	874, 1499
NruI	TCGCGA	1 cut(s)	351
NsiI	ATGCAT	2 cut(s)	6, 1101
NspV	TTCGAA	1 cut(s)	699
PciSI	GCTCTTC	1 cut(s)	1454
PcsI	WCGNNNNNNNCGW	4 cut(s)	489, 813, 1427, 1461
PdiI	GCCGGC	2 cut(s)	286, 1669
PfeI	GAWTC	6 cut(s)	592, 737, 1105, 1175, 1216, 1388
PflFI	GACNNNGTC	1 cut(s)	50
PflMI	CCANNNNNTGG	3 cut(s)	1158, 1405, 1486
PinAI	ACCGGT	1 cut(s)	1372
PleI	GAGTC	7 cut(s)	167, 386, 523, 685, 1369, 1506, 1656
PpsI	GAGTC	7 cut(s)	167, 386, 523, 685, 1369, 1506, 1656
PpuMI	RGGWCCY	1 cut(s)	716
PshBI	ATTAAT	1 cut(s)	1094
Psp124BI	GAGCTC	1 cut(s)	1600
Psp5II	RGGWCCY	1 cut(s)	716
Psp6I	CCWGG	2 cut(s)	657, 809
PspEI	GGTNACC	1 cut(s)	874
PspGI	CCWGG	2 cut(s)	657, 809
PspN4I	GGNNCC	5 cut(s)	188, 420, 717, 898, 955
PspOMI	GGGCCC	1 cut(s)	186
PspPI	GGNCC	9 cut(s)	117, 186, 187, 716, 813, 1378, 1396, 1423, 1477
PspPPI	RGGWCCY	1 cut(s)	716
PstI	CTGCAG	1 cut(s)	1659
PstNI	CAGNNNCTG	3 cut(s)	979, 1486, 1618
PsuI	RGATCY	1 cut(s)	371
PsyI	GACNNNGTC	1 cut(s)	50
RruI	TCGCGA	1 cut(s)	351
RsaI	GTAC	2 cut(s)	268, 966
RsaNI	GTAC	2 cut(s)	267, 965
RseI	CAYNNNNRTG	1 cut(s)	1334
Rsr2I	CGGWCCG	1 cut(s)	1423
RsrII	CGGWCCG	1 cut(s)	1423
SacI	GAGCTC	1 cut(s)	1600
SacII	CCGCGG	1 cut(s)	669
SalI	GTCGAC	1 cut(s)	745
SapI	GCTCTTC	1 cut(s)	1454
SaqAI	TTAA	1 cut(s)	1094
Sau3AI	GATC	3 cut(s)	371, 860, 1065
Sau96I	GGNCC	9 cut(s)	117, 186, 187, 716, 813, 1378, 1396, 1423, 1477
SchI	GAGTC	7 cut(s)	167, 387, 524, 686, 1370, 1507, 1656
ScrFI	CCNGG	7 cut(s)	416, 423, 424, 472, 659, 742, 811
SduI	GDGCHC	2 cut(s)	190, 1600
SfaNI	GCATC	5 cut(s)	13, 149, 291, 1338, 1473
SfcI	CTRYAG	2 cut(s)	1256, 1655
Sfr303I	CCGCGG	1 cut(s)	669
SfuI	TTCGAA	1 cut(s)	699
SgrAI	CRCCGGYG	1 cut(s)	284
SgrBI	CCGCGG	1 cut(s)	669
SinI	GGWCC	4 cut(s)	117, 716, 1423, 1477
SmaI	CCCGGG	1 cut(s)	424
SmiMI	CAYNNNNRTG	1 cut(s)	1334
SmlI	CTYRAG	1 cut(s)	512
SmoI	CTYRAG	1 cut(s)	512
Sse9I	AATT	2 cut(s)	1018, 1120
SstI	GAGCTC	1 cut(s)	1600
StyD4I	CCNGG	7 cut(s)	414, 421, 422, 470, 657, 740, 809
TaaI	ACNGT	3 cut(s)	94, 830, 1423
TaiI	ACGT	4 cut(s)	582, 1081, 1143, 1635
TasI	AATT	2 cut(s)	1018, 1120
TatI	WGTACW	1 cut(s)	964
TauI	GCSGC	8 cut(s)	17, 20, 23, 114, 489, 1397, 1544, 1592
TfiI	GAWTC	6 cut(s)	592, 737, 1105, 1175, 1216, 1388
Tru1I	TTAA	1 cut(s)	1094
Tru9I	TTAA	1 cut(s)	1094
TscAI	CASTG	3 cut(s)	188, 253, 699
TseFI	GTSAC	2 cut(s)	874, 1499
TseI	GCWGC	5 cut(s)	475, 767, 890, 1414, 1654
Tsp45I	GTSAC	2 cut(s)	874, 1499
TspDTI	ATGAA	2 cut(s)	584, 1222
TspGWI	ACGGA	2 cut(s)	145, 613
TspMI	CCCGGG	1 cut(s)	422
TspRI	CASTG	3 cut(s)	188, 253, 699
Tth111I	GACNNNGTC	1 cut(s)	50
Van91I	CCANNNNNTGG	3 cut(s)	1158, 1405, 1486
VpaK11BI	GGWCC	4 cut(s)	117, 716, 1423, 1477
VspI	ATTAAT	1 cut(s)	1094
XapI	RAATTY	1 cut(s)	1120
XcmI	CCANNNNNNNNNTGG	2 cut(s)	807, 907
XmaI	CCCGGG	1 cut(s)	422
XmiI	GTMKAC	1 cut(s)	746
ZraI	GACGTC	1 cut(s)	1633
Zsp2I	ATGCAT	2 cut(s)	6, 1101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.