Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0003535

Physical Location & Seq

Genomic Coordinates Forward (+)

21562800 .. 21566403

Gene Structure 3604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G210100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGCATCGCGCCACCGCCGCCCCAAATCCACTCCAAACCCTCCTCGACCTCATCAACTCCACCCTCTCCCTCCTCCTCCGCTCCTCCCTCACCGTCCGATCCTTCGTCGGACGGTGGACCGCCCTTCACACCAAGCTCACTTCCCTCCACTCTTCCATCGCCGACATCTCCGACTCTCCCCACTGGGCCCAGAACCCTCTTCTCCATACCCTCCTCCCCAACCTCCTCTCCACTCTCCAGCGCCTCACCGCCCTCGCCGACCAATGTACGGACGCCGGGTTCACCGGCGGGAAGCTCCACATGCAGAGCGACCTCGACATGGCCTCGTCCTCGCTCTGCAACCAGCTCCGCGACCTCGACTTGTTGCTCAGATCTGGAGTGCTCCACCAGTCGAACGCCATCGTTTTGTCCCTCCCGGGTCCCGGGTCGGATAAAGAGGATTTGGGTTTTTTTGTCCGGGACCTCTTCACCCGATTACAAATCGGAGGCGTCGAGTTTAAGAAAAAAGCTCTGGAGTCTCTGCTTCAGCTTCTCAACGACGACGGCAAGTCCTCCGGTGTCGTCGCCAAAGAAGGTAATGTCGCGTATTTGATTCATTTGCTCGATTTCCACAACCAGCCTTTTGTGCGAGAACAGGCTGTCTTCGCCGTTTGTCTCCTAGCCTCAGCCAACGACGAGTCGTCGCGCAAGGCCGTGTTCGAAGAAGGGGGTTTGGGGCCGTTGCTCAGAATACTCGAATCCGGGTCGACCCATTTGAAAGAGAAGGCGGCGATGGCCGTCGAGGCGCTCACGGCCGATCCGGAAAACGCCTGGGCCCTTTCGGCCTACGGTGGCGTCTCGGTGTTGATCGAAGCATGCCGATCTGGGTCTCCGGCGACTCAGACCCACGCGGCTGGCGCCATTATAAACGTGGCCAATGTGGAAGAGATCAAGACGGCTTTGGGAGAAGAAGGGGCTGTGCCAGTACTGGTCCAGTTATTGCTCTCAGGCTCCATTACTGCCCAAGAAAAATCAGCAAATTGTTTAGCGATTTTAGCCTCTTCCGATGAGTATTTTCGAGCTTTGATCATTCAAGAACGTGGGTTGCAGAGATTAATGCATTTGATCCAAGATTTACCGAGCTCGGACACATTGGAACACGTCCTCCGAGCCATAACCTCGCTTTCAGCTTCAGATTCATGCTTTAAAGTCCTGTCTTCTTCAACCCTTTTCCTAATTCAGCTCGGTGAGTTCATAAAGCACGGTAACACAACCCTACAGCAAATCTCAGCTTCGTTACTCGCTCACTTATCGATCAATGTGAGTGACGGCAATAAGCGAGCATTGGGTAGCTGTATGGGGTCGTTGGTGAAGCTCATGGAGTCGCCAAAACCGGTGGGTCTTCAAGAATCCGCGGCCCAAGTGCTTGTGTCGCTGCTTACGGTCCGGTCGAACAAGAAAGAGCTGGTGAGGGACGAGAAGAGCGTGATGAGGCTGGTCCAGATGTTGGATCCCAAGAATCACGAGATGGTTTGCAGCAAGTTCCCGGTGGCGGTGGTTGCGGCGATACTCTCCGGAGGGAGCGGTGGCTGCCGGAAAAGACTGGTGGCAGCCGGGGCTTACCCGCATTTGCAGAGGCTGGCGGAAATGGACGTCGTCGGAGCTAAGAAGGCACTGCAGAGACTCGCCGGAAACAGGCTCAAGACCATCTTCTCCAGAACTTGGAGGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm

Protein Analysis

571

Amino Acids

61.33

Weight (kDa)

7.67

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003535)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05810 AT2G05810
fragaria_vesca	FvH4_1g21781 FvH4_3g23060 FvH4_6g42120
malus_domestica	MD09G1114400.v1.1 MD17G1106100.v1.1
prunus_persica	Prupe.3G210100_v2.0.a1
pyrus_communis	pycom09g03890 pycom17g09870
rosa_chinensis	RchiOBHm_Chr2g0158031
rosa_laevigata	RLG00000005113 RLG00000009946 RLG00000011412 RLG00000014991 RLG00000021051 RLG00000034476
rosa_multiflora	Rmu_co8383981.1_g000001 Rmu_sc0000419.1_g000016 Rmu_sc0004064.1_g000016 Rmu_sc0009909.1_g000006
rosa_roxburghii	Rroxscaffold_2G00091730 Rroxscaffold_7G00168560
rosa_rugosa	Rorug02G0465300
rosa_samantha	Rh2AG531300 Rh2BG545800 Rh2CG515600 Rh2DG553900 Rh3AG074100 Rh3CG075500 Rh4AG058000 Rh4BG056800 Rh6AG401300 Rh6CG415200
rosa_wichuraiana	Rw2G043940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	905
AatII	GACGTC	1 cut(s)	1635
AccB1I	GGYRCC	1 cut(s)	896
AccB7I	CCANNNNNTGG	2 cut(s)	1486, 1701
AccBSI	CCGCTC	2 cut(s)	81, 1563
AccI	GTMKAC	1 cut(s)	746
AccII	CGCG	6 cut(s)	9, 351, 584, 685, 890, 1394
AccIII	TCCGGA	2 cut(s)	799, 1553
AclWI	GGATC	5 cut(s)	93, 791, 1099, 1484, 1497
AcoI	YGGCCR	3 cut(s)	774, 792, 912
AcuI	CTGAAG	2 cut(s)	509, 1155
AcyI	GRCGYC	5 cut(s)	273, 489, 834, 897, 1632
AfaI	GTAC	2 cut(s)	268, 966
AfiI	CCNNNNNNNGG	7 cut(s)	268, 319, 422, 1486, 1531, 1674, 1701
AflIII	ACRYGT	1 cut(s)	1138
AgeI	ACCGGT	1 cut(s)	1372
AgsI	TTSAA	4 cut(s)	757, 1073, 1203, 1385
AhdI	GACNNNNNGTC	2 cut(s)	547, 679
AjiI	CACGTC	1 cut(s)	1141
AjnI	CCWGG	1 cut(s)	809
AloI	GAACNNNNNNTCC	4 cut(s)	263, 295, 1128, 1160
Alw21I	GWGCWC	2 cut(s)	384, 1124
Alw26I	GTCTC	5 cut(s)	522, 659, 841, 873, 1654
AlwI	GGATC	5 cut(s)	93, 791, 1099, 1484, 1497
AlwNI	CAGNNNCTG	1 cut(s)	1618
Ama87I	CYCGRG	2 cut(s)	415, 422
Aor13HI	TCCGGA	2 cut(s)	799, 1553
ApaI	GGGCCC	2 cut(s)	190, 817
ApeKI	GCWGC	4 cut(s)	1414, 1515, 1569, 1589
AseI	ATTAAT	1 cut(s)	1094
AsiGI	ACCGGT	1 cut(s)	1372
AspLEI	GCGC	5 cut(s)	11, 243, 687, 787, 899
AsuC2I	CCSGG	9 cut(s)	277, 416, 417, 423, 424, 458, 742, 1526, 1594
AsuHPI	GGTGA	7 cut(s)	82, 238, 274, 460, 1238, 1360, 1459
AsuII	TTCGAA	1 cut(s)	699
AvaI	CYCGRG	2 cut(s)	415, 422
AvaII	GGWCC	6 cut(s)	117, 419, 460, 970, 1423, 1477
BaeGI	GKGCMC	2 cut(s)	190, 817
BalI	TGGCCA	1 cut(s)	914
BamHI	GGATCC	1 cut(s)	1489
BanI	GGYRCC	1 cut(s)	896
BanII	GRGCYC	3 cut(s)	190, 817, 1124
BauI	CACGAG	1 cut(s)	1502
BbsI	GAAGAC	3 cut(s)	634, 1188, 1373
Bbv12I	GWGCWC	2 cut(s)	384, 1124
BbvCI	CCTCAGC	1 cut(s)	664
BbvI	GCAGC	4 cut(s)	1401, 1527, 1556, 1601
BccI	CCATC	5 cut(s)	164, 407, 766, 1501, 1694
BceAI	ACGGC	8 cut(s)	559, 632, 677, 703, 761, 807, 951, 1324
BciT130I	CCWGG	1 cut(s)	811
BclI	TGATCA	1 cut(s)	1065
BcnI	CCSGG	9 cut(s)	277, 416, 417, 423, 424, 458, 742, 1526, 1594
BcoDI	GTCTC	5 cut(s)	522, 659, 841, 873, 1654
BfaI	CTAG	1 cut(s)	659
BfmI	CTRYAG	2 cut(s)	1256, 1655
BfoI	RGCGCY	3 cut(s)	244, 788, 900
BglI	GCCNNNNNGGC	2 cut(s)	782, 821
BglII	AGATCT	1 cut(s)	371
BisI	GCNGC	9 cut(s)	18, 768, 891, 1395, 1415, 1516, 1542, 1570, 1590
BlsI	GCNGC	9 cut(s)	19, 769, 892, 1396, 1416, 1517, 1543, 1571, 1591
BmcAI	AGTACT	1 cut(s)	966
Bme18I	GGWCC	6 cut(s)	117, 419, 460, 970, 1423, 1477
BmeRI	GACNNNNNGTC	2 cut(s)	547, 679
BmeT110I	CYCGRG	2 cut(s)	415, 422
BmgBI	CACGTC	1 cut(s)	1141
BmiI	GGNNCC	9 cut(s)	188, 420, 421, 461, 717, 815, 898, 991, 1491
BmrI	ACTGGG	1 cut(s)	193
BmsI	GCATC	1 cut(s)	13
BmuI	ACTGGG	1 cut(s)	193
BpiI	GAAGAC	3 cut(s)	634, 1188, 1373
BpmI	CTGGAG	4 cut(s)	221, 396, 533, 1678
Bpu10I	CCTNAGC	1 cut(s)	664
Bpu14I	TTCGAA	1 cut(s)	699
BpuEI	CTTGAG	1 cut(s)	1664
BpuMI	CCSGG	9 cut(s)	277, 416, 417, 423, 424, 458, 742, 1526, 1594
Bsa29I	ATCGAT	1 cut(s)	1292
BsaHI	GRCGYC	5 cut(s)	273, 489, 834, 897, 1632
BsaI	GGTCTC	1 cut(s)	873
BsaJI	CCNNGG	5 cut(s)	415, 422, 810, 1392, 1593
BsaWI	WCCGGW	5 cut(s)	554, 799, 1372, 1425, 1553
BsaXI	ACNNNNNCTCC	4 cut(s)	212, 242, 1128, 1158
Bsc4I	CCNNNNNNNGG	7 cut(s)	268, 319, 422, 1486, 1531, 1674, 1701
Bse118I	RCCGGY	2 cut(s)	284, 1372
Bse1I	ACTGG	6 cut(s)	188, 388, 962, 972, 973, 1587
BseAI	TCCGGA	2 cut(s)	799, 1553
BseBI	CCWGG	1 cut(s)	811
BseCI	ATCGAT	1 cut(s)	1292
BseDI	CCNNGG	5 cut(s)	415, 422, 810, 1392, 1593
BseLI	CCNNNNNNNGG	7 cut(s)	268, 319, 422, 1486, 1531, 1674, 1701
BseMII	CTCAG	6 cut(s)	382, 678, 739, 893, 999, 1281
BseNI	ACTGG	6 cut(s)	188, 388, 962, 972, 973, 1587
BseRI	GAGGAG	6 cut(s)	32, 62, 65, 73, 203, 215
BseSI	GKGCMC	2 cut(s)	190, 817
BseX3I	CGGCCG	1 cut(s)	792
BseXI	GCAGC	4 cut(s)	1401, 1527, 1556, 1601
Bsh1236I	CGCG	6 cut(s)	9, 351, 584, 685, 890, 1394
Bsh1285I	CGRYCG	2 cut(s)	795, 1430
BshNI	GGYRCC	1 cut(s)	896
BshTI	ACCGGT	1 cut(s)	1372
BshVI	ATCGAT	1 cut(s)	1292
BsiEI	CGRYCG	2 cut(s)	795, 1430
BsiHKAI	GWGCWC	2 cut(s)	384, 1124
BsiHKCI	CYCGRG	2 cut(s)	415, 422
BslFI	GGGAC	4 cut(s)	394, 405, 473, 1466
BslI	CCNNNNNNNGG	7 cut(s)	268, 319, 422, 1486, 1531, 1674, 1701
BsmAI	GTCTC	5 cut(s)	522, 659, 841, 873, 1654
BsmBI	CGTCTC	1 cut(s)	841
BsmFI	GGGAC	4 cut(s)	394, 405, 473, 1466
Bso31I	GGTCTC	1 cut(s)	873
BsoBI	CYCGRG	2 cut(s)	415, 422
Bsp119I	TTCGAA	1 cut(s)	699
Bsp120I	GGGCCC	2 cut(s)	186, 813
Bsp1286I	GDGCHC	4 cut(s)	190, 384, 817, 1124
Bsp13I	TCCGGA	2 cut(s)	799, 1553
BspCNI	CTCAG	6 cut(s)	381, 677, 738, 892, 998, 1280
BspDI	ATCGAT	1 cut(s)	1292
BspEI	TCCGGA	2 cut(s)	799, 1553
BspFNI	CGCG	6 cut(s)	9, 351, 584, 685, 890, 1394
BspLI	GGNNCC	9 cut(s)	188, 420, 421, 461, 717, 815, 898, 991, 1491
BspMAI	CTGCAG	1 cut(s)	1659
BspPI	GGATC	5 cut(s)	93, 791, 1099, 1484, 1497
BspQI	GCTCTTC	1 cut(s)	1454
BspT104I	TTCGAA	1 cut(s)	699
BspT107I	GGYRCC	1 cut(s)	896
BspTNI	GGTCTC	1 cut(s)	873
BsrBI	CCGCTC	2 cut(s)	81, 1563
BsrFI	RCCGGY	2 cut(s)	284, 1372
BsrI	ACTGG	6 cut(s)	188, 388, 962, 972, 973, 1587
BssAI	RCCGGY	2 cut(s)	284, 1372
BssECI	CCNNGG	5 cut(s)	415, 422, 810, 1392, 1593
BssNI	GRCGYC	5 cut(s)	273, 489, 834, 897, 1632
BssSI	CACGAG	1 cut(s)	1502
Bst2BI	CACGAG	1 cut(s)	1502
Bst2UI	CCWGG	1 cut(s)	811
Bst4CI	ACNGT	5 cut(s)	94, 114, 830, 1244, 1423
Bst6I	CTCTTC	6 cut(s)	157, 204, 470, 918, 1045, 1454
BstACI	GRCGYC	5 cut(s)	273, 489, 834, 897, 1632
BstBI	TTCGAA	1 cut(s)	699
BstC8I	GCNNGC	4 cut(s)	856, 895, 1320, 1620
BstDEI	CTNAG	7 cut(s)	368, 664, 725, 879, 985, 1267, 1644
BstDSI	CCRYGG	1 cut(s)	1392
BstFNI	CGCG	6 cut(s)	9, 351, 584, 685, 890, 1394
BstH2I	RGCGCY	3 cut(s)	244, 788, 900
BstHHI	GCGC	5 cut(s)	11, 243, 687, 787, 899
BstMAI	GTCTC	5 cut(s)	522, 659, 841, 873, 1654
BstMCI	CGRYCG	2 cut(s)	795, 1430
BstNI	CCWGG	1 cut(s)	811
BstNSI	RCATGY	2 cut(s)	304, 858
BstSFI	CTRYAG	2 cut(s)	1256, 1655
BstSLI	GKGCMC	2 cut(s)	190, 817
BstUI	CGCG	6 cut(s)	9, 351, 584, 685, 890, 1394
BstV1I	GCAGC	4 cut(s)	1401, 1527, 1556, 1601
BstV2I	GAAGAC	3 cut(s)	634, 1188, 1373
BstX2I	RGATCY	2 cut(s)	371, 1489
BstXI	CCANNNNNNTGG	1 cut(s)	893
BstYI	RGATCY	2 cut(s)	371, 1489
BstZI	CGGCCG	1 cut(s)	792
Bsu15I	ATCGAT	1 cut(s)	1292
BsuTUI	ATCGAT	1 cut(s)	1292
BtgI	CCRYGG	1 cut(s)	1392
BtgZI	GCGATG	2 cut(s)	142, 785
BtrI	CACGTC	1 cut(s)	1141
BtsI	GCAGTG	1 cut(s)	1652
BtsIMutI	CAGTG	2 cut(s)	181, 1652
Cac8I	GCNNGC	4 cut(s)	856, 895, 1320, 1620
CaiI	CAGNNNCTG	1 cut(s)	1618
CfoI	GCGC	5 cut(s)	11, 243, 687, 787, 899
Cfr10I	RCCGGY	2 cut(s)	284, 1372
Cfr42I	CCGCGG	1 cut(s)	1395
Cfr9I	CCCGGG	2 cut(s)	415, 422
ClaI	ATCGAT	1 cut(s)	1292
CpoI	CGGWCCG	1 cut(s)	1423
CseI	GACGC	3 cut(s)	281, 478, 823
Csp6I	GTAC	2 cut(s)	267, 965
CspAI	ACCGGT	1 cut(s)	1372
CspCI	CAANNNNNGTGG	2 cut(s)	1356, 1391
CspI	CGGWCCG	1 cut(s)	1423
CviAII	CATG	5 cut(s)	301, 319, 855, 1179, 1357
CviQI	GTAC	2 cut(s)	267, 965
DdeI	CTNAG	7 cut(s)	368, 664, 725, 879, 985, 1267, 1644
DinI	GGCGCC	1 cut(s)	898
DraI	TTTAAA	1 cut(s)	1186
DriI	GACNNNNNGTC	2 cut(s)	547, 679
EaeI	YGGCCR	3 cut(s)	774, 792, 912
EagI	CGGCCG	1 cut(s)	792
Eam1104I	CTCTTC	6 cut(s)	157, 204, 470, 918, 1045, 1454
Eam1105I	GACNNNNNGTC	2 cut(s)	547, 679
EarI	CTCTTC	6 cut(s)	157, 204, 470, 918, 1045, 1454
EciI	GGCGGA	1 cut(s)	1637
Ecl136II	GAGCTC	1 cut(s)	1122
EclXI	CGGCCG	1 cut(s)	792
Eco24I	GRGCYC	3 cut(s)	190, 817, 1124
Eco31I	GGTCTC	1 cut(s)	873
Eco47I	GGWCC	6 cut(s)	117, 419, 460, 970, 1423, 1477
Eco52I	CGGCCG	1 cut(s)	792
Eco53kI	GAGCTC	1 cut(s)	1122
Eco57I	CTGAAG	2 cut(s)	509, 1155
Eco88I	CYCGRG	2 cut(s)	415, 422
EcoICRI	GAGCTC	1 cut(s)	1122
EcoO109I	RGGNCCY	3 cut(s)	419, 460, 814
EcoRII	CCWGG	1 cut(s)	809
EcoT22I	ATGCAT	2 cut(s)	6, 1101
EcoT38I	GRGCYC	3 cut(s)	190, 817, 1124
EgeI	GGCGCC	1 cut(s)	898
EheI	GGCGCC	1 cut(s)	898
Esp3I	CGTCTC	1 cut(s)	841
FaeI	CATG	5 cut(s)	304, 322, 858, 1182, 1360
FalI	AAGNNNNNCTT	2 cut(s)	1673, 1705
FaqI	GGGAC	4 cut(s)	394, 405, 473, 1466
FatI	CATG	5 cut(s)	300, 318, 854, 1178, 1356
FauI	CCCGC	2 cut(s)	281, 1611
FbaI	TGATCA	1 cut(s)	1065
FblI	GTMKAC	1 cut(s)	746
Fnu4HI	GCNGC	9 cut(s)	18, 768, 891, 1395, 1415, 1516, 1542, 1570, 1590
FriOI	GRGCYC	3 cut(s)	190, 817, 1124
Fsp4HI	GCNGC	9 cut(s)	18, 768, 891, 1395, 1415, 1516, 1542, 1570, 1590
FspBI	CTAG	1 cut(s)	659
GlaI	GCGC	5 cut(s)	10, 242, 686, 786, 898
GluI	GCNGC	9 cut(s)	18, 768, 891, 1395, 1415, 1516, 1542, 1570, 1590
GsuI	CTGGAG	4 cut(s)	221, 396, 533, 1678
HaeII	RGCGCY	3 cut(s)	244, 788, 900
HgaI	GACGC	3 cut(s)	281, 478, 823
HhaI	GCGC	5 cut(s)	11, 243, 687, 787, 899
Hin1I	GRCGYC	5 cut(s)	273, 489, 834, 897, 1632
Hin1II	CATG	5 cut(s)	304, 322, 858, 1182, 1360
Hin6I	GCGC	5 cut(s)	9, 241, 685, 785, 897
HinP1I	GCGC	5 cut(s)	9, 241, 685, 785, 897
HincII	GTYRAC	1 cut(s)	747
HindII	GTYRAC	1 cut(s)	747
HphI	GGTGA	7 cut(s)	82, 238, 274, 460, 1238, 1360, 1459
Hpy166II	GTNNAC	3 cut(s)	117, 282, 747
Hpy8I	GTNNAC	3 cut(s)	117, 282, 747
HpyAV	CCTTC	7 cut(s)	112, 134, 566, 698, 757, 944, 1642
HpyCH4III	ACNGT	5 cut(s)	94, 114, 830, 1244, 1423
HpyCH4IV	ACGT	4 cut(s)	909, 1078, 1140, 1632
HpyCH4V	TGCA	8 cut(s)	4, 304, 339, 1087, 1099, 1515, 1612, 1657
HpyF3I	CTNAG	7 cut(s)	368, 664, 725, 879, 985, 1267, 1644
HpySE526I	ACGT	4 cut(s)	909, 1078, 1140, 1632
Hsp92I	GRCGYC	5 cut(s)	273, 489, 834, 897, 1632
Hsp92II	CATG	5 cut(s)	304, 322, 858, 1182, 1360
HspAI	GCGC	5 cut(s)	9, 241, 685, 785, 897
KasI	GGCGCC	1 cut(s)	896
KflI	GGGWCCC	1 cut(s)	419
Kpn2I	TCCGGA	2 cut(s)	799, 1553
Ksp22I	TGATCA	1 cut(s)	1065
KspI	CCGCGG	1 cut(s)	1395
LguI	GCTCTTC	1 cut(s)	1454
LmnI	GCTCC	7 cut(s)	86, 300, 351, 387, 995, 1560, 1640
Lsp1109I	GCAGC	4 cut(s)	1401, 1527, 1556, 1601
LweI	GCATC	1 cut(s)	13
MaeI	CTAG	1 cut(s)	659
MaeII	ACGT	4 cut(s)	909, 1078, 1140, 1632
MaeIII	GTNAC	3 cut(s)	1244, 1275, 1304
MbiI	CCGCTC	2 cut(s)	81, 1563
MflI	RGATCY	2 cut(s)	371, 1489
MhlI	GDGCHC	4 cut(s)	190, 384, 817, 1124
MlsI	TGGCCA	1 cut(s)	914
MluCI	AATT	2 cut(s)	1018, 1215
MluNI	TGGCCA	1 cut(s)	914
Mly113I	GGCGCC	1 cut(s)	897
MlyI	GAGTC	6 cut(s)	167, 524, 686, 871, 1370, 1656
MmeI	TCCRAC	5 cut(s)	88, 195, 408, 1467, 1618
Mox20I	TGGCCA	1 cut(s)	914
Mph1103I	ATGCAT	2 cut(s)	6, 1101
MroI	TCCGGA	2 cut(s)	799, 1553
MscI	TGGCCA	1 cut(s)	914
MseI	TTAA	3 cut(s)	498, 1094, 1185
Msp20I	TGGCCA	1 cut(s)	914
MspA1I	CMGCKG	1 cut(s)	1394
MvaI	CCWGG	1 cut(s)	811
MvnI	CGCG	6 cut(s)	9, 351, 584, 685, 890, 1394
NarI	GGCGCC	1 cut(s)	897
NciI	CCSGG	9 cut(s)	277, 416, 417, 423, 424, 458, 742, 1526, 1594
NlaIII	CATG	5 cut(s)	304, 322, 858, 1182, 1360
NlaIV	GGNNCC	9 cut(s)	188, 420, 421, 461, 717, 815, 898, 991, 1491
NmuCI	GTSAC	1 cut(s)	1304
NsiI	ATGCAT	2 cut(s)	6, 1101
NspI	RCATGY	2 cut(s)	304, 858
NspV	TTCGAA	1 cut(s)	699
PaeI	GCATGC	1 cut(s)	858
PciSI	GCTCTTC	1 cut(s)	1454
PcsI	WCGNNNNNNNCGW	3 cut(s)	489, 1427, 1461
PfeI	GAWTC	5 cut(s)	592, 737, 1175, 1388, 1498
PflFI	GACNNNGTC	1 cut(s)	1634
PflMI	CCANNNNNTGG	2 cut(s)	1486, 1701
PfoI	TCCNGGA	1 cut(s)	456
PinAI	ACCGGT	1 cut(s)	1372
PkrI	GCNGC	9 cut(s)	19, 769, 892, 1396, 1416, 1517, 1543, 1571, 1591
PleI	GAGTC	6 cut(s)	167, 523, 685, 871, 1369, 1656
PluTI	GGCGCC	1 cut(s)	900
PpsI	GAGTC	6 cut(s)	167, 523, 685, 871, 1369, 1656
PpuMI	RGGWCCY	2 cut(s)	419, 460
PshBI	ATTAAT	1 cut(s)	1094
PsiI	TTATAA	1 cut(s)	905
Psp124BI	GAGCTC	1 cut(s)	1124
Psp5II	RGGWCCY	2 cut(s)	419, 460
Psp6I	CCWGG	1 cut(s)	809
PspGI	CCWGG	1 cut(s)	809
PspN4I	GGNNCC	9 cut(s)	188, 420, 421, 461, 717, 815, 898, 991, 1491
PspOMI	GGGCCC	2 cut(s)	186, 813
PspPPI	RGGWCCY	2 cut(s)	419, 460
PstI	CTGCAG	1 cut(s)	1659
PstNI	CAGNNNCTG	1 cut(s)	1618
PsuI	RGATCY	2 cut(s)	371, 1489
PsyI	GACNNNGTC	1 cut(s)	1634
RsaI	GTAC	2 cut(s)	268, 966
RsaNI	GTAC	2 cut(s)	267, 965
Rsr2I	CGGWCCG	1 cut(s)	1423
RsrII	CGGWCCG	1 cut(s)	1423
SacI	GAGCTC	1 cut(s)	1124
SacII	CCGCGG	1 cut(s)	1395
SalI	GTCGAC	1 cut(s)	745
SapI	GCTCTTC	1 cut(s)	1454
SaqAI	TTAA	3 cut(s)	498, 1094, 1185
SatI	GCNGC	9 cut(s)	18, 768, 891, 1395, 1415, 1516, 1542, 1570, 1590
ScaI	AGTACT	1 cut(s)	966
SchI	GAGTC	6 cut(s)	167, 524, 686, 871, 1370, 1656
SduI	GDGCHC	4 cut(s)	190, 384, 817, 1124
SfaNI	GCATC	1 cut(s)	13
SfcI	CTRYAG	2 cut(s)	1256, 1655
SfiI	GGCCNNNNNGGCC	1 cut(s)	821
SfoI	GGCGCC	1 cut(s)	898
Sfr303I	CCGCGG	1 cut(s)	1395
SfuI	TTCGAA	1 cut(s)	699
SgrAI	CRCCGGYG	1 cut(s)	284
SgrBI	CCGCGG	1 cut(s)	1395
SinI	GGWCC	6 cut(s)	117, 419, 460, 970, 1423, 1477
SmaI	CCCGGG	2 cut(s)	417, 424
SmlI	CTYRAG	1 cut(s)	1679
SmoI	CTYRAG	1 cut(s)	1679
SphI	GCATGC	1 cut(s)	858
Sse9I	AATT	2 cut(s)	1018, 1215
SspDI	GGCGCC	1 cut(s)	896
SspMI	CTAG	1 cut(s)	659
SstI	GAGCTC	1 cut(s)	1124
TaaI	ACNGT	5 cut(s)	94, 114, 830, 1244, 1423
TaiI	ACGT	4 cut(s)	912, 1081, 1143, 1635
TasI	AATT	2 cut(s)	1018, 1215
TatI	WGTACW	1 cut(s)	964
TauI	GCSGC	5 cut(s)	20, 770, 893, 1397, 1544
TfiI	GAWTC	5 cut(s)	592, 737, 1175, 1388, 1498
Tru1I	TTAA	3 cut(s)	498, 1094, 1185
Tru9I	TTAA	3 cut(s)	498, 1094, 1185
TscAI	CASTG	2 cut(s)	188, 1659
TseFI	GTSAC	1 cut(s)	1304
TseI	GCWGC	4 cut(s)	1414, 1515, 1569, 1589
Tsp45I	GTSAC	1 cut(s)	1304
TspDTI	ATGAA	3 cut(s)	584, 1167, 1222
TspGWI	ACGGA	1 cut(s)	284
TspMI	CCCGGG	2 cut(s)	415, 422
TspRI	CASTG	2 cut(s)	188, 1659
Tth111I	GACNNNGTC	1 cut(s)	1634
Van91I	CCANNNNNTGG	2 cut(s)	1486, 1701
VpaK11BI	GGWCC	6 cut(s)	117, 419, 460, 970, 1423, 1477
VspI	ATTAAT	1 cut(s)	1094
XceI	RCATGY	2 cut(s)	304, 858
XcmI	CCANNNNNNNNNTGG	1 cut(s)	907
XmaI	CCCGGG	2 cut(s)	415, 422
XmiI	GTMKAC	1 cut(s)	746
XspI	CTAG	1 cut(s)	659
ZraI	GACGTC	1 cut(s)	1633
ZrmI	AGTACT	1 cut(s)	966
Zsp2I	ATGCAT	2 cut(s)	6, 1101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.