Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001580

Physical Location & Seq

Genomic Coordinates Reverse (-)

4383542 .. 4385662

Gene Structure 2121 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g03841.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGAATCTTTCATCTCTTCCTTCTCTCTTCCGCTCCTCAATCACAACACTCCTCCACTACAGCCGTCAAAAAGACCTCCGACACGGCAAAGCTGTCCACGCCCACATCACCAAAACCGGGTCCTCTTCTTCCCTCCACGTCTCCAACACCCTCGTCAGCTTCTACCTCAAATGCGGAGACTTCCCCACCGCACATCTCATCTTCGAGGCCACGCCCAACAAGGACGTTGTCTCATTCAACAACCTCATCAATGCCTGCTCTCATCACCACCAACACTCTTCTCTTGTGATGCGCCTCTTTCGACGAATGAGGGCGGAAAACACCTCCCCCAACTCCCACACTTTCGCCGGAGTCTTCACCGCTGCCTCGTCTGAAGCGTCTGATGTTTTAGGTGGACGGCATGTGCATGCTGTTGTGATCAAAGATGTGAGATCTTTCGACGTCTTTGTTGGGAGTTGTTTGGTTAACATGTACTGTAAAATGGGGCTTGTGGGTGATGCACGTAAGGTGTTTGATAGAATGTCTGAGAGGAATTCCGTTTCGTGGGCTACTATGATTTCGGGGTACGCAATGCAGCGCATGGCTGGCGAGGCGGTGGAGGTTTTCAGGTTGATGAGGAGGAGTGAGGAGAATGAGGGGGAGAATGAGTTTGTTTTGACTAGTGTTGTGAGTGCGTTGGCTGTTCGTGAGTTTGTTGATACGGGGAAGCAGATTCATTGTGTTGCGGTGAAAAATGGGCTGATGAGTTTTGTGTCTGTTGGGAATGCGCTTGTTACAATGTATGGGAAATGTGGGAGTTTGGATGATGCGCTTAGGACTTTTGAGCTGTCTGGTGATAAGAATTCGATCACTTGGTCTGCTATGATATGTGGTTTTGGGCAGAGTGGGGACTCCCATAAGGCTTTGGACTTGTTTAGAGACATGCATTTTTCTGGGATAATGCCGAGCCAGTATACGTTTGTTGGGGTCATCAATGCTTGTGGTGACATTGGTGCTCTTAGAGAAGGACAACAAGTGCATAGTTTTTTGTTGAAGATGGGATTTGAAGGGCAGGTATACATAATGTCTGCTTTGGTTGACATGTATGCAAAATGTGGTAGAGTTGCTGATGCTCGTAATGGGTTTGAGTATATAAAAGAACCCGATGTTGTTCTATGGACTTCTATGATTGGAGGGTATGTACAAAACGGGGAGTATGAAGCTGCTTTGGGTTTGTATTGCAGAATGCATAAGGAGGGAATCATGCCTAATAAACTTACCATGGCCAGTGTTTTGAAAGCATGCTCGAACCTGAGTTCTTTTGAACAAGGAAAGCAAATTCATGCCCGTACAATCAAGTATGGATTCAGTCTTGAAGTTCCAATTGGAAGTGCTCTTTCCACCATGTATGCAAAGTGTGGGAATTTAGAAGATGGGAATCTTGTATTTAGGAGGATGCCAGTGAGGGATGTAGTCGCTTGGAATGGAATAATCTCTGGCCTTTCTCAAAATGGGCGAGGGACAGAGGCCTTAGATCTCTTTGAGGAGATGCGATTGGGGGAAACGAAGCCAGATTACGTTACATTTGTGAATGTGCTCTCCGCTTGCAGCCATATGGGATTCGTTGAGAGAGGATGGATTTATTTCAAGATGATGTATGATGAATTTGGCATAGCCCCAAGAGTGGAGCATTATGCTTGCATGGTTGATGTTCTGAGCCGCGCTGGGAGGTTAGATGAAGCCAAACACTTTATAGAGTCAGCAACTATTGATCATGGGATTTATTTATGGCGTATTTTATTAAGTGCTTGTCGTAACTATCGGAATTATGAATTGGGAGCTTATGCCGGAGAGAAGCTTATTGAGTTAGGAACATCGGAATCATCTACATATGTGTTGTTGGCAAGCATATATACTTCTTTGGGCAGGCGGGAAGATGTAGAGCAGGTAAGGAGGATGATGAATCTTCGTGGGGTGAGTAAGGAGCCTGGGTGCAGCTGGATTGAGTTGAAGAGTCAGGTTCATGTGTTTGTTGTTCATGATGAGATGCATCCACATATTGAAAACATATATGCTGAGATCCGAAGGTTAATAAAGCATATGAAGGATGAAGGTTACCAACCTTCTAGTATCACCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

707

Amino Acids

78.89

Weight (kDa)

7.15

Isoelectric Point (pI)

47.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	74 - 120	2.4e-07	PPR repeat family
PPR_2	PF13041	280 - 327	1.5e-10	PPR repeat family
PPR	PF01535	283 - 313	9e-07	PPR repeat
PPR_3	PF13812	380 - 429	5.1e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	381 - 430	1.9e-12	PPR repeat family
PPR	PF01535	384 - 414	8.4e-08	PPR repeat
PPR_2	PF13041	482 - 530	2.1e-10	PPR repeat family
PPR	PF01535	485 - 511	2.1e-06	PPR repeat
E_motif	PF20431	600 - 662	6.8e-18	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680
fragaria_vesca	FvH4_7g03841 FvH4_7g03850
malus_domestica	MD02G1276700.v1.1
prunus_persica	Prupe.2G043400_v2.0.a1
pyrus_communis	pycom02g23700
rosa_chinensis	RchiOBHm_Chr1g0326811 RchiOBHm_Chr1g0326821 RchiOBHm_Chr1g0327271 RchiOBHm_Chr1g0327321
rosa_laevigata	RLG00000030002 RLG00000030005 RLG00000030054
rosa_multiflora	Rmu_sc0001021.1_g000002 Rmu_sc0003600.1_g000043 Rmu_sc0005038.1_g000015 Rmu_sc0010151.1_g000003 Rmu_sc0010151.1_g000004 Rmu_sc0020365.1_g000001
rosa_roxburghii	Rroxscaffold_2G00128000 Rroxscaffold_4G00322770 Rroxscaffold_4G00322870
rosa_rugosa	Rorug01G0064900 Rorug01G0065300 Rorug01G0065400 Rorug01G0065500 Rorug01G0065500
rosa_samantha	Rh1AG082500 Rh1AG083100 Rh1BG065600 Rh1BG065900 Rh1BG066000 Rh1CG080500 Rh1DG087500 Rh2AG148500 Rh2AG148600 Rh2BG154000 Rh2DG154200 Rh3CG329400
rosa_wichuraiana	Rw1G006500 Rw1G006530 Rw2G011590 Rw2G011600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	444
Acc36I	ACCTGC	2 cut(s)	1042, 1915
AccBSI	CCGCTC	1 cut(s)	33
AccI	GTMKAC	2 cut(s)	953, 1056
AccII	CGCG	1 cut(s)	1701
AclWI	GGATC	1 cut(s)	2053
AcoI	YGGCCR	1 cut(s)	1263
AcsI	RAATTY	5 cut(s)	532, 841, 1317, 1402, 1643
AcuI	CTGAAG	1 cut(s)	393
AcyI	GRCGYC	1 cut(s)	441
AfaI	GTAC	4 cut(s)	473, 566, 1182, 1330
AfiI	CCNNNNNNNGG	3 cut(s)	117, 543, 1663
AflIII	ACRYGT	2 cut(s)	468, 1080
AgsI	TTSAA	9 cut(s)	238, 1033, 1046, 1276, 1304, 1355, 1627, 1990, 2042
AhlI	ACTAGT	1 cut(s)	659
AjiI	CACGTC	1 cut(s)	139
AjnI	CCWGG	1 cut(s)	1966
AjuI	GAANNNNNNNTTGG	4 cut(s)	1347, 1379, 1796, 1828
AluBI	AGCT	7 cut(s)	92, 159, 826, 1202, 1820, 1837, 1977
AluI	AGCT	7 cut(s)	92, 159, 826, 1202, 1820, 1837, 1977
Alw21I	GWGCWC	3 cut(s)	997, 1375, 1578
Alw26I	GTCTC	4 cut(s)	145, 171, 235, 912
AlwI	GGATC	1 cut(s)	2053
AoxI	GGCC	4 cut(s)	207, 1263, 1477, 1506
ApeKI	GCWGC	5 cut(s)	362, 574, 1202, 1587, 1974
ApoI	RAATTY	5 cut(s)	532, 841, 1317, 1402, 1643
AspLEI	GCGC	5 cut(s)	294, 579, 769, 811, 1703
AspS9I	GGNCC	1 cut(s)	120
AsuC2I	CCSGG	1 cut(s)	118
AsuHPI	GGTGA	9 cut(s)	100, 257, 349, 506, 739, 845, 995, 1966, 2104
AvaII	GGWCC	1 cut(s)	120
BalI	TGGCCA	1 cut(s)	1265
BarI	GAAGNNNNNNTAC	2 cut(s)	1538, 1570
BbsI	GAAGAC	1 cut(s)	346
Bbv12I	GWGCWC	3 cut(s)	997, 1375, 1578
BbvI	GCAGC	5 cut(s)	349, 586, 1189, 1599, 1986
BccI	CCATC	3 cut(s)	1030, 1406, 1608
BceAI	ACGGC	3 cut(s)	48, 100, 413
BciT130I	CCWGG	1 cut(s)	1968
BclI	TGATCA	2 cut(s)	417, 1750
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	4 cut(s)	145, 171, 235, 912
BcuI	ACTAGT	1 cut(s)	659
BfaI	CTAG	2 cut(s)	660, 2106
BfmI	CTRYAG	1 cut(s)	58
BfuAI	ACCTGC	2 cut(s)	1042, 1915
BglII	AGATCT	2 cut(s)	431, 1513
BisI	GCNGC	6 cut(s)	363, 575, 1203, 1588, 1699, 1975
BlsI	GCNGC	6 cut(s)	364, 576, 1204, 1589, 1700, 1976
Bme1390I	CCNGG	2 cut(s)	118, 1968
Bme18I	GGWCC	1 cut(s)	120
BmgBI	CACGTC	1 cut(s)	139
BmgT120I	GGNCC	1 cut(s)	120
BmiI	GGNNCC	2 cut(s)	121, 1965
BmrFI	CCNGG	2 cut(s)	118, 1968
BmsI	GCATC	8 cut(s)	279, 487, 796, 1099, 1425, 1518, 2016, 2038
BpiI	GAAGAC	1 cut(s)	346
Bpu10I	CCTNAGC	1 cut(s)	812
BpuMI	CCSGG	1 cut(s)	118
BsaAI	YACGTR	1 cut(s)	503
BsaBI	GATNNNNATC	1 cut(s)	1416
BsaHI	GRCGYC	1 cut(s)	441
BsaJI	CCNNGG	2 cut(s)	1260, 1967
BsaXI	ACNNNNNCTCC	6 cut(s)	632, 662, 1164, 1194, 1955, 1985
Bsc4I	CCNNNNNNNGG	3 cut(s)	117, 543, 1663
Bse1I	ACTGG	3 cut(s)	949, 1266, 1439
Bse3DI	GCAATG	1 cut(s)	576
Bse8I	GATNNNNATC	1 cut(s)	1416
BseBI	CCWGG	1 cut(s)	1968
BseDI	CCNNGG	2 cut(s)	1260, 1967
BseGI	GGATG	7 cut(s)	808, 1440, 1453, 1619, 1941, 2029, 2092
BseJI	GATNNNNATC	1 cut(s)	1416
BseLI	CCNNNNNNNGG	3 cut(s)	117, 543, 1663
BseMI	GCAATG	1 cut(s)	576
BseMII	CTCAG	4 cut(s)	516, 1283, 1685, 2046
BseNI	ACTGG	3 cut(s)	949, 1266, 1439
BseRI	GAGGAG	6 cut(s)	25, 41, 631, 634, 641, 1538
BseXI	GCAGC	5 cut(s)	349, 586, 1189, 1599, 1986
BseYI	CCCAGC	1 cut(s)	1703
BsgI	GTGCAG	1 cut(s)	1993
Bsh1236I	CGCG	1 cut(s)	1701
BshFI	GGCC	4 cut(s)	209, 1265, 1479, 1508
BsiHKAI	GWGCWC	3 cut(s)	997, 1375, 1578
BsiSI	CCGG	3 cut(s)	117, 348, 1827
BslFI	GGGAC	2 cut(s)	902, 1513
BslI	CCNNNNNNNGG	3 cut(s)	117, 543, 1663
BsmAI	GTCTC	4 cut(s)	145, 171, 235, 912
BsmBI	CGTCTC	1 cut(s)	145
BsmFI	GGGAC	2 cut(s)	902, 1513
BsmI	GAATGC	2 cut(s)	769, 1230
BsnI	GGCC	4 cut(s)	209, 1265, 1479, 1508
Bsp1286I	GDGCHC	3 cut(s)	997, 1375, 1578
Bsp1407I	TGTACA	1 cut(s)	1180
Bsp143I	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
Bsp19I	CCATGG	1 cut(s)	1260
BspANI	GGCC	4 cut(s)	209, 1265, 1479, 1508
BspCNI	CTCAG	4 cut(s)	517, 1284, 1686, 2047
BspFNI	CGCG	1 cut(s)	1701
BspHI	TCATGA	1 cut(s)	2017
BspLI	GGNNCC	2 cut(s)	121, 1965
BspMI	ACCTGC	2 cut(s)	1042, 1915
BspPI	GGATC	1 cut(s)	2053
BsrBI	CCGCTC	1 cut(s)	33
BsrDI	GCAATG	1 cut(s)	576
BsrGI	TGTACA	1 cut(s)	1180
BsrI	ACTGG	3 cut(s)	949, 1266, 1439
BssECI	CCNNGG	2 cut(s)	1260, 1967
BssMI	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
BssNAI	GTATAC	2 cut(s)	954, 1057
BssNI	GRCGYC	1 cut(s)	441
BssT1I	CCWWGG	1 cut(s)	1260
Bst1107I	GTATAC	2 cut(s)	954, 1057
Bst2UI	CCWGG	1 cut(s)	1968
Bst4CI	ACNGT	1 cut(s)	476
Bst6I	CTCTTC	5 cut(s)	21, 32, 130, 283, 1985
BstACI	GRCGYC	1 cut(s)	441
BstAUI	TGTACA	1 cut(s)	1180
BstBAI	YACGTR	1 cut(s)	503
BstC8I	GCNNGC	8 cut(s)	256, 408, 586, 1282, 1585, 1678, 1885, 1907
BstDEI	CTNAG	7 cut(s)	525, 812, 998, 1292, 1510, 1694, 2055
BstDSI	CCRYGG	1 cut(s)	1260
BstEII	GGTNACC	1 cut(s)	2093
BstF5I	GGATG	7 cut(s)	808, 1440, 1453, 1619, 1941, 2029, 2092
BstFNI	CGCG	1 cut(s)	1701
BstHHI	GCGC	5 cut(s)	294, 579, 769, 811, 1703
BstKTI	GATC	6 cut(s)	420, 434, 849, 1516, 1753, 2061
BstMAI	GTCTC	4 cut(s)	145, 171, 235, 912
BstMBI	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
BstMWI	GCNNNNNNNGC	3 cut(s)	98, 585, 590
BstNI	CCWGG	1 cut(s)	1968
BstNSI	RCATGY	6 cut(s)	404, 410, 472, 925, 1084, 1284
BstPI	GGTNACC	1 cut(s)	2093
BstSCI	CCNGG	2 cut(s)	116, 1966
BstSFI	CTRYAG	1 cut(s)	58
BstUI	CGCG	1 cut(s)	1701
BstV1I	GCAGC	5 cut(s)	349, 586, 1189, 1599, 1986
BstV2I	GAAGAC	1 cut(s)	346
BstX2I	RGATCY	3 cut(s)	431, 1513, 2058
BstYI	RGATCY	3 cut(s)	431, 1513, 2058
BstZ17I	GTATAC	2 cut(s)	954, 1057
BsuRI	GGCC	4 cut(s)	209, 1265, 1479, 1508
BtgI	CCRYGG	1 cut(s)	1260
BtrI	CACGTC	1 cut(s)	139
BtsCI	GGATG	7 cut(s)	808, 1440, 1453, 1619, 1941, 2029, 2092
BtsIMutI	CAGTG	2 cut(s)	1273, 1446
BveI	ACCTGC	2 cut(s)	1042, 1915
Cac8I	GCNNGC	8 cut(s)	256, 408, 586, 1282, 1585, 1678, 1885, 1907
CciI	TCATGA	1 cut(s)	2017
CfoI	GCGC	5 cut(s)	294, 579, 769, 811, 1703
Cfr13I	GGNCC	1 cut(s)	120
CseI	GACGC	1 cut(s)	366
Csp6I	GTAC	4 cut(s)	472, 565, 1181, 1329
CspCI	CAANNNNNGTGG	2 cut(s)	961, 996
CviQI	GTAC	4 cut(s)	472, 565, 1181, 1329
DdeI	CTNAG	7 cut(s)	525, 812, 998, 1292, 1510, 1694, 2055
DpnI	GATC	6 cut(s)	419, 433, 848, 1515, 1752, 2060
DpnII	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
EaeI	YGGCCR	1 cut(s)	1263
Eam1104I	CTCTTC	5 cut(s)	21, 32, 130, 283, 1985
EarI	CTCTTC	5 cut(s)	21, 32, 130, 283, 1985
EciI	GGCGGA	1 cut(s)	329
Eco130I	CCWWGG	1 cut(s)	1260
Eco147I	AGGCCT	1 cut(s)	1508
Eco47I	GGWCC	1 cut(s)	120
Eco57I	CTGAAG	1 cut(s)	393
Eco91I	GGTNACC	1 cut(s)	2093
EcoO109I	RGGNCCY	1 cut(s)	120
EcoO65I	GGTNACC	1 cut(s)	2093
EcoRI	GAATTC	2 cut(s)	532, 841
EcoRII	CCWGG	1 cut(s)	1966
EcoT14I	CCWWGG	1 cut(s)	1260
EcoT22I	ATGCAT	3 cut(s)	927, 1230, 2031
ErhI	CCWWGG	1 cut(s)	1260
Esp3I	CGTCTC	1 cut(s)	145
FaqI	GGGAC	2 cut(s)	902, 1513
FauI	CCCGC	1 cut(s)	1902
FauNDI	CATATG	3 cut(s)	1593, 1870, 2079
FbaI	TGATCA	2 cut(s)	417, 1750
FblI	GTMKAC	2 cut(s)	953, 1056
Fnu4HI	GCNGC	6 cut(s)	363, 575, 1203, 1588, 1699, 1975
FokI	GGATG	7 cut(s)	815, 1447, 1460, 1626, 1948, 2016, 2099
Fsp4HI	GCNGC	6 cut(s)	363, 575, 1203, 1588, 1699, 1975
FspBI	CTAG	2 cut(s)	660, 2106
GlaI	GCGC	5 cut(s)	293, 578, 768, 810, 1702
GluI	GCNGC	6 cut(s)	363, 575, 1203, 1588, 1699, 1975
GsaI	CCCAGC	1 cut(s)	1707
HaeIII	GGCC	4 cut(s)	209, 1265, 1479, 1508
HapII	CCGG	3 cut(s)	117, 348, 1827
HgaI	GACGC	1 cut(s)	366
HhaI	GCGC	5 cut(s)	294, 579, 769, 811, 1703
Hin1I	GRCGYC	1 cut(s)	441
Hin6I	GCGC	5 cut(s)	292, 577, 767, 809, 1701
HinP1I	GCGC	5 cut(s)	292, 577, 767, 809, 1701
HincII	GTYRAC	2 cut(s)	466, 1078
HindII	GTYRAC	2 cut(s)	466, 1078
HindIII	AAGCTT	1 cut(s)	1835
HpaI	GTTAAC	1 cut(s)	466
HpaII	CCGG	3 cut(s)	117, 348, 1827
HphI	GGTGA	9 cut(s)	100, 257, 349, 506, 739, 845, 995, 1966, 2104
Hpy166II	GTNNAC	6 cut(s)	97, 395, 466, 954, 1057, 1078
Hpy188I	TCNGA	8 cut(s)	80, 373, 382, 526, 1695, 1803, 1858, 2063
Hpy188III	TCNNGA	4 cut(s)	686, 1352, 1627, 2018
Hpy8I	GTNNAC	6 cut(s)	97, 395, 466, 954, 1057, 1078
Hpy99I	CGWCG	2 cut(s)	306, 443
HpyAV	CCTTC	7 cut(s)	30, 998, 1040, 2058, 2077, 2084, 2112
HpyCH4III	ACNGT	1 cut(s)	476
HpyCH4IV	ACGT	6 cut(s)	138, 225, 441, 502, 956, 1557
HpyF10VI	GCNNNNNNNGC	3 cut(s)	98, 585, 590
HpyF3I	CTNAG	7 cut(s)	525, 812, 998, 1292, 1510, 1694, 2055
HpySE526I	ACGT	6 cut(s)	138, 225, 441, 502, 956, 1557
Hsp92I	GRCGYC	1 cut(s)	441
HspAI	GCGC	5 cut(s)	292, 577, 767, 809, 1701
Ksp22I	TGATCA	2 cut(s)	417, 1750
KspAI	GTTAAC	1 cut(s)	466
Kzo9I	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
LmnI	GCTCC	4 cut(s)	38, 1666, 1817, 1963
Lsp1109I	GCAGC	5 cut(s)	349, 586, 1189, 1599, 1986
LweI	GCATC	8 cut(s)	279, 487, 796, 1099, 1425, 1518, 2016, 2038
MaeI	CTAG	2 cut(s)	660, 2106
MaeII	ACGT	6 cut(s)	138, 225, 441, 502, 956, 1557
MaeIII	GTNAC	5 cut(s)	772, 983, 1558, 1793, 2093
MalI	GATC	6 cut(s)	419, 433, 848, 1515, 1752, 2060
MbiI	CCGCTC	1 cut(s)	33
MboI	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
MfeI	CAATTG	1 cut(s)	1362
MflI	RGATCY	3 cut(s)	431, 1513, 2058
MhlI	GDGCHC	3 cut(s)	997, 1375, 1578
MlsI	TGGCCA	1 cut(s)	1265
MluCI	AATT	8 cut(s)	532, 841, 1317, 1362, 1402, 1643, 1804, 1811
MluNI	TGGCCA	1 cut(s)	1265
MlyI	GAGTC	4 cut(s)	360, 884, 1745, 2002
MmeI	TCCRAC	2 cut(s)	103, 168
Mox20I	TGGCCA	1 cut(s)	1265
Mph1103I	ATGCAT	3 cut(s)	927, 1230, 2031
MscI	TGGCCA	1 cut(s)	1265
MseI	TTAA	3 cut(s)	465, 1781, 2069
MslI	CAYNNNNRTG	1 cut(s)	405
Msp20I	TGGCCA	1 cut(s)	1265
MspA1I	CMGCKG	2 cut(s)	362, 1977
MspI	CCGG	3 cut(s)	117, 348, 1827
MspR9I	CCNGG	2 cut(s)	118, 1968
MunI	CAATTG	1 cut(s)	1362
Mva1269I	GAATGC	2 cut(s)	769, 1230
MvaI	CCWGG	1 cut(s)	1968
MvnI	CGCG	1 cut(s)	1701
MwoI	GCNNNNNNNGC	3 cut(s)	98, 585, 590
NciI	CCSGG	1 cut(s)	118
NcoI	CCATGG	1 cut(s)	1260
NdeI	CATATG	3 cut(s)	1593, 1870, 2079
NdeII	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
NlaIV	GGNNCC	2 cut(s)	121, 1965
NmeAIII	GCCGAG	1 cut(s)	969
NmuCI	GTSAC	1 cut(s)	983
NsiI	ATGCAT	3 cut(s)	927, 1230, 2031
NspI	RCATGY	6 cut(s)	404, 410, 472, 925, 1084, 1284
PaeI	GCATGC	2 cut(s)	410, 1284
PagI	TCATGA	1 cut(s)	2017
PceI	AGGCCT	1 cut(s)	1508
PciI	ACATGT	2 cut(s)	468, 1080
PcsI	WCGNNNNNNNCGW	1 cut(s)	374
PctI	GAATGC	2 cut(s)	769, 1230
PfeI	GAWTC	8 cut(s)	4, 712, 1239, 1344, 1417, 1599, 1859, 1942
PflFI	GACNNNGTC	1 cut(s)	227
PkrI	GCNGC	6 cut(s)	364, 576, 1204, 1589, 1700, 1976
PleI	GAGTC	4 cut(s)	359, 884, 1744, 2001
PpsI	GAGTC	4 cut(s)	359, 884, 1744, 2001
Ppu21I	YACGTR	1 cut(s)	503
PpuMI	RGGWCCY	1 cut(s)	120
PscI	ACATGT	2 cut(s)	468, 1080
Psp5II	RGGWCCY	1 cut(s)	120
Psp6I	CCWGG	1 cut(s)	1966
PspEI	GGTNACC	1 cut(s)	2093
PspFI	CCCAGC	1 cut(s)	1703
PspGI	CCWGG	1 cut(s)	1966
PspN4I	GGNNCC	2 cut(s)	121, 1965
PspPI	GGNCC	1 cut(s)	120
PspPPI	RGGWCCY	1 cut(s)	120
PsuI	RGATCY	3 cut(s)	431, 1513, 2058
PsyI	GACNNNGTC	1 cut(s)	227
PvuII	CAGCTG	1 cut(s)	1977
RsaI	GTAC	4 cut(s)	473, 566, 1182, 1330
RsaNI	GTAC	4 cut(s)	472, 565, 1181, 1329
RseI	CAYNNNNRTG	1 cut(s)	405
SaqAI	TTAA	3 cut(s)	465, 1781, 2069
SatI	GCNGC	6 cut(s)	363, 575, 1203, 1588, 1699, 1975
Sau3AI	GATC	6 cut(s)	417, 431, 846, 1513, 1750, 2058
Sau96I	GGNCC	1 cut(s)	120
SchI	GAGTC	4 cut(s)	360, 884, 1745, 2002
ScrFI	CCNGG	2 cut(s)	118, 1968
SduI	GDGCHC	3 cut(s)	997, 1375, 1578
SfaNI	GCATC	8 cut(s)	279, 487, 796, 1099, 1425, 1518, 2016, 2038
SfcI	CTRYAG	1 cut(s)	58
SinI	GGWCC	1 cut(s)	120
SmiMI	CAYNNNNRTG	1 cut(s)	405
SpeI	ACTAGT	1 cut(s)	659
SphI	GCATGC	2 cut(s)	410, 1284
Sse9I	AATT	8 cut(s)	532, 841, 1317, 1362, 1402, 1643, 1804, 1811
SseBI	AGGCCT	1 cut(s)	1508
SspMI	CTAG	2 cut(s)	660, 2106
StuI	AGGCCT	1 cut(s)	1508
StyD4I	CCNGG	2 cut(s)	116, 1966
StyI	CCWWGG	1 cut(s)	1260
TaaI	ACNGT	1 cut(s)	476
TaiI	ACGT	6 cut(s)	141, 228, 444, 505, 959, 1560
TaqI	TCGA	5 cut(s)	204, 301, 438, 845, 1286
TasI	AATT	8 cut(s)	532, 841, 1317, 1362, 1402, 1643, 1804, 1811
TatI	WGTACW	2 cut(s)	471, 1180
TauI	GCSGC	1 cut(s)	1701
TfiI	GAWTC	8 cut(s)	4, 712, 1239, 1344, 1417, 1599, 1859, 1942
Tru1I	TTAA	3 cut(s)	465, 1781, 2069
Tru9I	TTAA	3 cut(s)	465, 1781, 2069
TscAI	CASTG	2 cut(s)	1273, 1446
TseFI	GTSAC	1 cut(s)	983
TseI	GCWGC	5 cut(s)	362, 574, 1202, 1587, 1974
Tsp45I	GTSAC	1 cut(s)	983
TspGWI	ACGGA	1 cut(s)	526
TspRI	CASTG	2 cut(s)	1273, 1446
Tth111I	GACNNNGTC	1 cut(s)	227
VpaK11BI	GGWCC	1 cut(s)	120
XapI	RAATTY	5 cut(s)	532, 841, 1317, 1402, 1643
XceI	RCATGY	6 cut(s)	404, 410, 472, 925, 1084, 1284
XmiI	GTMKAC	2 cut(s)	953, 1056
XspI	CTAG	2 cut(s)	660, 2106
ZraI	GACGTC	1 cut(s)	442
Zsp2I	ATGCAT	3 cut(s)	927, 1230, 2031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.