Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 |
| fragaria_vesca | FvH4_7g03841 FvH4_7g03850 |
| malus_domestica | MD02G1276700.v1.1 |
| prunus_persica | Prupe.2G043400_v2.0.a1 |
| pyrus_communis | pycom02g23700 |
| rosa_chinensis | RchiOBHm_Chr1g0326811 RchiOBHm_Chr1g0326821 RchiOBHm_Chr1g0327271 RchiOBHm_Chr1g0327321 |
| rosa_laevigata | RLG00000030002 RLG00000030005 RLG00000030054 |
| rosa_multiflora | Rmu_sc0001021.1_g000002 Rmu_sc0003600.1_g000043 Rmu_sc0005038.1_g000015 Rmu_sc0010151.1_g000003 Rmu_sc0010151.1_g000004 Rmu_sc0020365.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00128000 Rroxscaffold_4G00322770 Rroxscaffold_4G00322870 |
| rosa_rugosa | Rorug01G0064900 Rorug01G0065300 Rorug01G0065400 Rorug01G0065500 Rorug01G0065500 |
| rosa_samantha | Rh1AG082500 Rh1AG083100 Rh1BG065600 Rh1BG065900 Rh1BG066000 Rh1CG080500 Rh1DG087500 Rh2AG148500 Rh2AG148600 Rh2BG154000 Rh2DG154200 Rh3CG329400 |
| rosa_wichuraiana | Rw1G006500 Rw1G006530 Rw2G011590 Rw2G011600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 309 |
| AccII | CGCG | 1 cut(s) | 92 |
| AciI | CCGC | 3 cut(s) | 90, 92, 155 |
| AcsI | RAATTY | 2 cut(s) | 119, 271 |
| AgsI | TTSAA | 1 cut(s) | 431 |
| AluBI | AGCT | 1 cut(s) | 256 |
| AluI | AGCT | 1 cut(s) | 256 |
| ApeKI | GCWGC | 2 cut(s) | 40, 43 |
| ApoI | RAATTY | 2 cut(s) | 119, 271 |
| AseI | ATTAAT | 1 cut(s) | 420 |
| AspLEI | GCGC | 2 cut(s) | 241, 310 |
| AsuHPI | GGTGA | 1 cut(s) | 169 |
| BbvI | GCAGC | 2 cut(s) | 27, 30 |
| BfmI | CTRYAG | 1 cut(s) | 409 |
| BisI | GCNGC | 2 cut(s) | 41, 44 |
| BlsI | GCNGC | 2 cut(s) | 42, 45 |
| BmiI | GGNNCC | 1 cut(s) | 114 |
| BmsI | GCATC | 1 cut(s) | 226 |
| BsaJI | CCNNGG | 1 cut(s) | 90 |
| BseDI | CCNNGG | 1 cut(s) | 90 |
| BseMII | CTCAG | 1 cut(s) | 369 |
| BseRI | GAGGAG | 1 cut(s) | 71 |
| BseXI | GCAGC | 2 cut(s) | 27, 30 |
| Bsh1236I | CGCG | 1 cut(s) | 92 |
| BsmI | GAATGC | 1 cut(s) | 199 |
| BspACI | CCGC | 3 cut(s) | 90, 92, 155 |
| BspCNI | CTCAG | 1 cut(s) | 370 |
| BspFNI | CGCG | 1 cut(s) | 92 |
| BspLI | GGNNCC | 1 cut(s) | 114 |
| BssECI | CCNNGG | 1 cut(s) | 90 |
| Bst4CI | ACNGT | 1 cut(s) | 9 |
| Bst6I | CTCTTC | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 1 cut(s) | 137 |
| BstDEI | CTNAG | 3 cut(s) | 98, 242, 378 |
| BstDSI | CCRYGG | 1 cut(s) | 90 |
| BstFNI | CGCG | 1 cut(s) | 92 |
| BstHHI | GCGC | 2 cut(s) | 241, 310 |
| BstNSI | RCATGY | 1 cut(s) | 355 |
| BstSFI | CTRYAG | 1 cut(s) | 409 |
| BstUI | CGCG | 1 cut(s) | 92 |
| BstV1I | GCAGC | 2 cut(s) | 27, 30 |
| BtgI | CCRYGG | 1 cut(s) | 90 |
| BtgZI | GCGATG | 1 cut(s) | 305 |
| Cac8I | GCNNGC | 1 cut(s) | 137 |
| CfoI | GCGC | 2 cut(s) | 241, 310 |
| Cfr42I | CCGCGG | 1 cut(s) | 93 |
| CviAII | CATG | 2 cut(s) | 282, 352 |
| CviJI | RGCY | 3 cut(s) | 169, 256, 332 |
| CviKI_1 | RGCY | 3 cut(s) | 169, 256, 332 |
| DdeI | CTNAG | 3 cut(s) | 98, 242, 378 |
| Eam1104I | CTCTTC | 1 cut(s) | 63 |
| EarI | CTCTTC | 1 cut(s) | 63 |
| Eco32I | GATATC | 1 cut(s) | 297 |
| EcoRI | GAATTC | 1 cut(s) | 271 |
| EcoRV | GATATC | 1 cut(s) | 297 |
| EcoT22I | ATGCAT | 1 cut(s) | 357 |
| FaeI | CATG | 2 cut(s) | 285, 355 |
| FaiI | YATR | 4 cut(s) | 38, 213, 283, 353 |
| FatI | CATG | 2 cut(s) | 281, 351 |
| Fnu4HI | GCNGC | 2 cut(s) | 41, 44 |
| Fsp4HI | GCNGC | 2 cut(s) | 41, 44 |
| FspI | TGCGCA | 1 cut(s) | 309 |
| GlaI | GCGC | 2 cut(s) | 240, 309 |
| GluI | GCNGC | 2 cut(s) | 41, 44 |
| HhaI | GCGC | 2 cut(s) | 241, 310 |
| Hin1II | CATG | 2 cut(s) | 285, 355 |
| Hin6I | GCGC | 2 cut(s) | 239, 308 |
| HinP1I | GCGC | 2 cut(s) | 239, 308 |
| HinfI | GANTC | 2 cut(s) | 142, 320 |
| HphI | GGTGA | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 2 cut(s) | 325, 349 |
| Hpy188III | TCNNGA | 3 cut(s) | 116, 205, 428 |
| HpyCH4III | ACNGT | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 17, 197, 355 |
| HpyF3I | CTNAG | 3 cut(s) | 98, 242, 378 |
| Hsp92II | CATG | 2 cut(s) | 285, 355 |
| HspAI | GCGC | 2 cut(s) | 239, 308 |
| KspI | CCGCGG | 1 cut(s) | 93 |
| LpnPI | CCDG | 6 cut(s) | 117, 129, 246, 285, 348, 421 |
| Lsp1109I | GCAGC | 2 cut(s) | 27, 30 |
| LweI | GCATC | 1 cut(s) | 226 |
| MaeIII | GTNAC | 2 cut(s) | 202, 413 |
| MboII | GAAGA | 2 cut(s) | 77, 80 |
| MluCI | AATT | 2 cut(s) | 119, 271 |
| MnlI | CCTC | 3 cut(s) | 22, 49, 54 |
| Mph1103I | ATGCAT | 1 cut(s) | 357 |
| MseI | TTAA | 1 cut(s) | 420 |
| MspA1I | CMGCKG | 1 cut(s) | 92 |
| Mva1269I | GAATGC | 1 cut(s) | 199 |
| MvnI | CGCG | 1 cut(s) | 92 |
| NlaIII | CATG | 2 cut(s) | 285, 355 |
| NlaIV | GGNNCC | 1 cut(s) | 114 |
| NmuCI | GTSAC | 2 cut(s) | 202, 413 |
| NsbI | TGCGCA | 1 cut(s) | 309 |
| NsiI | ATGCAT | 1 cut(s) | 357 |
| NspI | RCATGY | 1 cut(s) | 355 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 212 |
| PctI | GAATGC | 1 cut(s) | 199 |
| PfeI | GAWTC | 2 cut(s) | 142, 320 |
| PkrI | GCNGC | 2 cut(s) | 42, 45 |
| PshBI | ATTAAT | 1 cut(s) | 420 |
| PspN4I | GGNNCC | 1 cut(s) | 114 |
| SacII | CCGCGG | 1 cut(s) | 93 |
| SaqAI | TTAA | 1 cut(s) | 420 |
| SatI | GCNGC | 2 cut(s) | 41, 44 |
| SetI | ASST | 2 cut(s) | 33, 258 |
| SfaNI | GCATC | 1 cut(s) | 226 |
| SfcI | CTRYAG | 1 cut(s) | 409 |
| Sfr303I | CCGCGG | 1 cut(s) | 93 |
| SgrBI | CCGCGG | 1 cut(s) | 93 |
| Sse9I | AATT | 2 cut(s) | 119, 271 |
| SsiI | CCGC | 3 cut(s) | 90, 92, 155 |
| TaaI | ACNGT | 1 cut(s) | 9 |
| TasI | AATT | 2 cut(s) | 119, 271 |
| TfiI | GAWTC | 2 cut(s) | 142, 320 |
| Tru1I | TTAA | 1 cut(s) | 420 |
| Tru9I | TTAA | 1 cut(s) | 420 |
| TseFI | GTSAC | 2 cut(s) | 202, 413 |
| TseI | GCWGC | 2 cut(s) | 40, 43 |
| Tsp45I | GTSAC | 2 cut(s) | 202, 413 |
| TspDTI | ATGAA | 1 cut(s) | 134 |
| VspI | ATTAAT | 1 cut(s) | 420 |
| XapI | RAATTY | 2 cut(s) | 119, 271 |
| XceI | RCATGY | 1 cut(s) | 355 |
| Zsp2I | ATGCAT | 1 cut(s) | 357 |