Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001580

Physical Location & Seq

Genomic Coordinates Reverse (-)

11688390 .. 11690164

Gene Structure 1775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G011600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1563 bp

ATGCGGGGTGAGAACGCCTCCCCGGATTCGCACACTTTTGCTGGAGTTTGTAATGTTGCCTCATATGTAAAGGATGTTTTGGGTGGCGGGCAAGTTCACACGGTTGCTGTTAAGGCTGTTGGCTGTTTTGATGTGTTTGTTGGTAGCTCTCTTGTTAATATGAATTCGGTTACTTGGGCTACTATGATTTCTGGCTGGGTATGCAATGCAACAGTTGGGTGCAAATGCGTTAGAGGTTTTTATGCTGCTGCGCGTAGGAGTGAGGAGAGGGAAGAAGAGAATGAGTTTGTTTTGACCGCGGTTCTTAGTGGTTTGGGGGTTCCTGAATTTGTTGATACAGGCAAGCAGATTCATTGTCTTGCGGTGAAAAATGGGTTGATGTGTAATGTTTCTGTTGGGAATGCACTTGTCACGATGTATGCGAAATGTGGGAGTTTAGATGATGCGCTTAGAACTTTTGAGCTGTCTGGCGATGAGAATTCTATCACATGGTCTGCGATGATATCTGGTTTTGCGCAGAGTGGGGATTCGGAAAAGGCTTTGGACTTGTTTTCAGACATGCATTTTTCTGGGATAGTGCCGACTGAGTTTGCGTTTGGTGGGGAAAGCAAGTTGGGATTTGAATTCCAATTATATATAATTTCAGCTTTGGTTGACATGTATGGCAAATGTGGTAGCGTTAGTGATGCTCGGAAAGGGTTTGATTGTATAAAAGAGCCTGATATTGTTCTTTGGAGTTCTATGATCGGAGGGTATGTACAAAATGCGGAGAATGAAGCTGCTTTGTGTTTATGCTGTAGAATGCAGAGGGAGGGATTTTTGCCCAATGAACTCACTATGGCCAGTCTCCTGAAAGCATGTTCAAGCCTATGTGCATTTGAACAAGGAAAGCAAATCCATGCGCATACCATTAAATGTGGGAATTTGGAAGATGGGAACTTAGTGTTTAGGAGAATGCCTACGAGAGATGTAGTGTCCTGGAATGCAATGATATCTGGGCTTTCACAAAATGGGCAGGGTAACGAAGCTCTAGAGCTCTTTGAGGAGATGCGATTGGGTGGCACAGAGCCGGATTACGTTACATTTGTGAATGTTCTCTCTGCTTGCAGCCATATGGGATCTGTGGAGAGGATGGATTTATTTCAAGATGATTTCGATGAAGCCAACGATTTCATAGAGTCAGCAACTATTGATCATGGCATCTGTTTATGGCGTATTTTATTAAGTGCTTGTCGAAACTATCGGAATTATGAATTGGGAGCATATGCCGGAGAGAAGTTAATGGAGTTAGGTTCACTAGAATCACAGTCTTACGTGCTATTGTCAAGCATCTATACTTCCCTGGGTAGGCGGGAAGATGTTGAGCGGGTAAGGAGGATGATGAAACTTCGAGGGGTGAGTAAGAAGCCTGGCTGTAGCTGGATTGAGTTGAAGAGTCAGGTTCATGTGTTTGTTGTTGGTGATTTGATGCATCCACAGATCGATAGTATAGGTGTTGAGATCCGAAGGTTAATCAAGCATATGAAGGATGAAGGATACCAACCTTCCTCTATCACCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

520

Amino Acids

57.14

Weight (kDa)

5.09

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	160 - 199	4.8e-08	PPR repeat family
PPR	PF01535	162 - 192	6.2e-08	PPR repeat
PPR_2	PF13041	240 - 288	4.5e-09	PPR repeat family
PPR_2	PF13041	322 - 370	2.1e-13	PPR repeat family
PPR_1	PF12854	322 - 351	8e-07	PPR repeat
PPR	PF01535	325 - 351	3e-09	PPR repeat
E_motif	PF20431	414 - 476	6.5e-20	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680
fragaria_vesca	FvH4_7g03841 FvH4_7g03850
malus_domestica	MD02G1276700.v1.1
prunus_persica	Prupe.2G043400_v2.0.a1
pyrus_communis	pycom02g23700
rosa_chinensis	RchiOBHm_Chr1g0326811 RchiOBHm_Chr1g0326821 RchiOBHm_Chr1g0327271 RchiOBHm_Chr1g0327321
rosa_laevigata	RLG00000030002 RLG00000030005 RLG00000030054
rosa_multiflora	Rmu_sc0001021.1_g000002 Rmu_sc0003600.1_g000043 Rmu_sc0005038.1_g000015 Rmu_sc0010151.1_g000003 Rmu_sc0010151.1_g000004 Rmu_sc0020365.1_g000001
rosa_roxburghii	Rroxscaffold_2G00128000 Rroxscaffold_4G00322770 Rroxscaffold_4G00322870
rosa_rugosa	Rorug01G0064900 Rorug01G0065300 Rorug01G0065400 Rorug01G0065500 Rorug01G0065500
rosa_samantha	Rh1AG082500 Rh1AG083100 Rh1BG065600 Rh1BG065900 Rh1BG066000 Rh1CG080500 Rh1DG087500 Rh2AG148500 Rh2AG148600 Rh2BG154000 Rh2DG154200 Rh3CG329400
rosa_wichuraiana	Rw1G006500 Rw1G006530 Rw2G011590 Rw2G011600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	516, 903
AccBSI	CCGCTC	1 cut(s)	1366
AccII	CGCG	2 cut(s)	253, 299
AciI	CCGC	8 cut(s)	4, 87, 297, 299, 362, 767, 1351, 1366
AclWI	GGATC	2 cut(s)	1126, 1495
AcoI	YGGCCR	1 cut(s)	840
AcsI	RAATTY	5 cut(s)	163, 326, 478, 623, 922
AfaI	GTAC	1 cut(s)	759
AfiI	CCNNNNNNNGG	1 cut(s)	1347
AflIII	ACRYGT	1 cut(s)	657
AgsI	TTSAA	5 cut(s)	623, 864, 881, 1145, 1432
AjnI	CCWGG	3 cut(s)	977, 1341, 1408
AjuI	GAANNNNNNNTTGG	2 cut(s)	1238, 1270
AluBI	AGCT	7 cut(s)	147, 463, 647, 779, 1028, 1036, 1419
AluI	AGCT	7 cut(s)	147, 463, 647, 779, 1028, 1036, 1419
Alw21I	GWGCWC	1 cut(s)	1038
Alw26I	GTCTC	1 cut(s)	851
AlwI	GGATC	2 cut(s)	1126, 1495
AoxI	GGCC	1 cut(s)	840
ApeKI	GCWGC	4 cut(s)	245, 248, 779, 1107
ApoI	RAATTY	5 cut(s)	163, 326, 478, 623, 922
AspLEI	GCGC	4 cut(s)	253, 448, 517, 904
AsuC2I	CCSGG	1 cut(s)	23
AsuHPI	GGTGA	5 cut(s)	20, 376, 1408, 1472, 1546
BalI	TGGCCA	1 cut(s)	842
BanII	GRGCYC	1 cut(s)	1038
Bbv12I	GWGCWC	1 cut(s)	1038
BbvI	GCAGC	4 cut(s)	232, 235, 766, 1119
BccI	CCATC	2 cut(s)	926, 1126
BciT130I	CCWGG	3 cut(s)	979, 1343, 1410
BciVI	GTATCC	1 cut(s)	1529
BclI	TGATCA	1 cut(s)	1192
BcnI	CCSGG	1 cut(s)	23
BcoDI	GTCTC	1 cut(s)	851
BfaI	CTAG	2 cut(s)	1031, 1298
BfmI	CTRYAG	2 cut(s)	796, 1414
BfuI	GTATCC	1 cut(s)	1529
BisI	GCNGC	4 cut(s)	246, 249, 780, 1108
BlsI	GCNGC	4 cut(s)	247, 250, 781, 1109
Bme1390I	CCNGG	4 cut(s)	23, 979, 1343, 1410
BmiI	GGNNCC	1 cut(s)	321
BmrFI	CCNGG	4 cut(s)	23, 979, 1343, 1410
BmsI	GCATC	7 cut(s)	433, 676, 1038, 1209, 1338, 1458, 1480
BplI	GAGNNNNNCTC	1 cut(s)	34
BpmI	CTGGAG	1 cut(s)	63
BpuMI	CCSGG	1 cut(s)	23
Bsa29I	ATCGAT	1 cut(s)	1482
BsaAI	YACGTR	1 cut(s)	1315
BsaJI	CCNNGG	4 cut(s)	21, 297, 1341, 1342
BsaXI	ACNNNNNCTCC	2 cut(s)	741, 771
Bsc4I	CCNNNNNNNGG	1 cut(s)	1347
Bse1I	ACTGG	1 cut(s)	843
Bse3DI	GCAATG	2 cut(s)	211, 993
BseBI	CCWGG	3 cut(s)	979, 1343, 1410
BseCI	ATCGAT	1 cut(s)	1482
BseDI	CCNNGG	4 cut(s)	21, 297, 1341, 1342
BseGI	GGATG	5 cut(s)	79, 1137, 1383, 1471, 1534
BseLI	CCNNNNNNNGG	1 cut(s)	1347
BseMI	GCAATG	2 cut(s)	211, 993
BseMII	CTCAG	1 cut(s)	576
BseNI	ACTGG	1 cut(s)	843
BseRI	GAGGAG	2 cut(s)	278, 1058
BseXI	GCAGC	4 cut(s)	232, 235, 766, 1119
BseYI	CCCAGC	1 cut(s)	195
Bsh1236I	CGCG	2 cut(s)	253, 299
BshFI	GGCC	1 cut(s)	842
BshVI	ATCGAT	1 cut(s)	1482
BsiHKAI	GWGCWC	1 cut(s)	1038
BsiSI	CCGG	3 cut(s)	23, 1070, 1269
BslI	CCNNNNNNNGG	1 cut(s)	1347
BsmAI	GTCTC	1 cut(s)	851
BsmI	GAATGC	4 cut(s)	406, 807, 960, 988
BsnI	GGCC	1 cut(s)	842
Bsp1286I	GDGCHC	1 cut(s)	1038
Bsp1407I	TGTACA	1 cut(s)	757
Bsp143I	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
BspACI	CCGC	8 cut(s)	4, 87, 297, 299, 362, 767, 1351, 1366
BspANI	GGCC	1 cut(s)	842
BspCNI	CTCAG	1 cut(s)	577
BspDI	ATCGAT	1 cut(s)	1482
BspFNI	CGCG	2 cut(s)	253, 299
BspLI	GGNNCC	1 cut(s)	321
BspPI	GGATC	2 cut(s)	1126, 1495
BsrBI	CCGCTC	1 cut(s)	1366
BsrDI	GCAATG	2 cut(s)	211, 993
BsrGI	TGTACA	1 cut(s)	757
BsrI	ACTGG	1 cut(s)	843
BssECI	CCNNGG	4 cut(s)	21, 297, 1341, 1342
BssMI	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
Bst2UI	CCWGG	3 cut(s)	979, 1343, 1410
Bst4CI	ACNGT	3 cut(s)	103, 214, 1308
Bst6I	CTCTTC	2 cut(s)	270, 1427
BstAUI	TGTACA	1 cut(s)	757
BstBAI	YACGTR	1 cut(s)	1315
BstC8I	GCNNGC	3 cut(s)	89, 344, 1105
BstDEI	CTNAG	4 cut(s)	305, 449, 585, 940
BstDSI	CCRYGG	1 cut(s)	297
BstF5I	GGATG	5 cut(s)	79, 1137, 1383, 1471, 1534
BstFNI	CGCG	2 cut(s)	253, 299
BstHHI	GCGC	4 cut(s)	253, 448, 517, 904
BstKTI	GATC	5 cut(s)	747, 1121, 1195, 1482, 1503
BstMAI	GTCTC	1 cut(s)	851
BstMBI	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
BstMWI	GCNNNNNNNGC	2 cut(s)	113, 201
BstNI	CCWGG	3 cut(s)	979, 1343, 1410
BstNSI	RCATGY	3 cut(s)	562, 661, 861
BstSCI	CCNGG	4 cut(s)	21, 977, 1341, 1408
BstSFI	CTRYAG	2 cut(s)	796, 1414
BstUI	CGCG	2 cut(s)	253, 299
BstV1I	GCAGC	4 cut(s)	232, 235, 766, 1119
BstX2I	RGATCY	2 cut(s)	1118, 1500
BstYI	RGATCY	2 cut(s)	1118, 1500
Bsu15I	ATCGAT	1 cut(s)	1482
BsuI	GTATCC	1 cut(s)	1529
BsuRI	GGCC	1 cut(s)	842
BsuTUI	ATCGAT	1 cut(s)	1482
BtgI	CCRYGG	1 cut(s)	297
BtgZI	GCGATG	2 cut(s)	486, 512
BtsCI	GGATG	5 cut(s)	79, 1137, 1383, 1471, 1534
Cac8I	GCNNGC	3 cut(s)	89, 344, 1105
CfoI	GCGC	4 cut(s)	253, 448, 517, 904
Cfr42I	CCGCGG	1 cut(s)	300
ClaI	ATCGAT	1 cut(s)	1482
Csp6I	GTAC	1 cut(s)	758
CviAII	CATG	7 cut(s)	489, 559, 658, 858, 899, 1196, 1445
CviQI	GTAC	1 cut(s)	758
DdeI	CTNAG	4 cut(s)	305, 449, 585, 940
DpnI	GATC	5 cut(s)	746, 1120, 1194, 1481, 1502
DpnII	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
EaeI	YGGCCR	1 cut(s)	840
Eam1104I	CTCTTC	2 cut(s)	270, 1427
EarI	CTCTTC	2 cut(s)	270, 1427
Ecl136II	GAGCTC	1 cut(s)	1036
Eco24I	GRGCYC	1 cut(s)	1038
Eco32I	GATATC	2 cut(s)	504, 993
Eco53kI	GAGCTC	1 cut(s)	1036
EcoICRI	GAGCTC	1 cut(s)	1036
EcoRI	GAATTC	3 cut(s)	163, 478, 623
EcoRII	CCWGG	3 cut(s)	977, 1341, 1408
EcoRV	GATATC	2 cut(s)	504, 993
EcoT22I	ATGCAT	2 cut(s)	564, 1473
EcoT38I	GRGCYC	1 cut(s)	1038
FaeI	CATG	7 cut(s)	492, 562, 661, 861, 902, 1199, 1448
FatI	CATG	7 cut(s)	488, 558, 657, 857, 898, 1195, 1444
FauI	CCCGC	3 cut(s)	80, 1344, 1359
FauNDI	CATATG	4 cut(s)	64, 1113, 1264, 1521
FbaI	TGATCA	1 cut(s)	1192
Fnu4HI	GCNGC	4 cut(s)	246, 249, 780, 1108
FokI	GGATG	5 cut(s)	86, 1144, 1390, 1458, 1541
FriOI	GRGCYC	1 cut(s)	1038
Fsp4HI	GCNGC	4 cut(s)	246, 249, 780, 1108
FspAI	RTGCGCAY	1 cut(s)	903
FspBI	CTAG	2 cut(s)	1031, 1298
FspI	TGCGCA	2 cut(s)	516, 903
GlaI	GCGC	4 cut(s)	252, 447, 516, 903
GluI	GCNGC	4 cut(s)	246, 249, 780, 1108
GsaI	CCCAGC	1 cut(s)	199
GsuI	CTGGAG	1 cut(s)	63
HaeIII	GGCC	1 cut(s)	842
HapII	CCGG	3 cut(s)	23, 1070, 1269
HhaI	GCGC	4 cut(s)	253, 448, 517, 904
Hin1II	CATG	7 cut(s)	492, 562, 661, 861, 902, 1199, 1448
Hin6I	GCGC	4 cut(s)	251, 446, 515, 902
HinP1I	GCGC	4 cut(s)	251, 446, 515, 902
HincII	GTYRAC	1 cut(s)	655
HindII	GTYRAC	1 cut(s)	655
HinfI	GANTC	6 cut(s)	26, 349, 527, 1178, 1301, 1435
HpaII	CCGG	3 cut(s)	23, 1070, 1269
HphI	GGTGA	5 cut(s)	20, 376, 1408, 1472, 1546
Hpy166II	GTNNAC	3 cut(s)	97, 655, 1295
Hpy188I	TCNGA	6 cut(s)	532, 556, 693, 749, 1245, 1505
Hpy188III	TCNNGA	5 cut(s)	323, 412, 850, 1031, 1145
Hpy8I	GTNNAC	3 cut(s)	97, 655, 1295
HpyAV	CCTTC	4 cut(s)	1500, 1519, 1526, 1554
HpyCH4III	ACNGT	3 cut(s)	103, 214, 1308
HpyCH4IV	ACGT	2 cut(s)	1077, 1314
HpyF10VI	GCNNNNNNNGC	2 cut(s)	113, 201
HpyF3I	CTNAG	4 cut(s)	305, 449, 585, 940
HpySE526I	ACGT	2 cut(s)	1077, 1314
Hsp92II	CATG	7 cut(s)	492, 562, 661, 861, 902, 1199, 1448
HspAI	GCGC	4 cut(s)	251, 446, 515, 902
Ksp22I	TGATCA	1 cut(s)	1192
KspI	CCGCGG	1 cut(s)	300
Kzo9I	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
LmnI	GCTCC	1 cut(s)	1259
Lsp1109I	GCAGC	4 cut(s)	232, 235, 766, 1119
LweI	GCATC	7 cut(s)	433, 676, 1038, 1209, 1338, 1458, 1480
MaeI	CTAG	2 cut(s)	1031, 1298
MaeII	ACGT	2 cut(s)	1077, 1314
MaeIII	GTNAC	4 cut(s)	169, 409, 1019, 1078
MalI	GATC	5 cut(s)	746, 1120, 1194, 1481, 1502
MbiI	CCGCTC	1 cut(s)	1366
MboI	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
MboII	GAAGA	5 cut(s)	284, 287, 941, 1367, 1444
MflI	RGATCY	2 cut(s)	1118, 1500
MhlI	GDGCHC	1 cut(s)	1038
MlsI	TGGCCA	1 cut(s)	842
MluCI	AATT	9 cut(s)	163, 326, 478, 623, 629, 639, 922, 1246, 1253
MluNI	TGGCCA	1 cut(s)	842
MlyI	GAGTC	2 cut(s)	1187, 1444
Mox20I	TGGCCA	1 cut(s)	842
Mph1103I	ATGCAT	2 cut(s)	564, 1473
MscI	TGGCCA	1 cut(s)	842
MseI	TTAA	6 cut(s)	111, 156, 912, 1223, 1280, 1511
Msp20I	TGGCCA	1 cut(s)	842
MspA1I	CMGCKG	1 cut(s)	299
MspI	CCGG	3 cut(s)	23, 1070, 1269
MspR9I	CCNGG	4 cut(s)	23, 979, 1343, 1410
Mva1269I	GAATGC	4 cut(s)	406, 807, 960, 988
MvaI	CCWGG	3 cut(s)	979, 1343, 1410
MvnI	CGCG	2 cut(s)	253, 299
MwoI	GCNNNNNNNGC	2 cut(s)	113, 201
NciI	CCSGG	1 cut(s)	23
NdeI	CATATG	4 cut(s)	64, 1113, 1264, 1521
NdeII	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
NlaIII	CATG	7 cut(s)	492, 562, 661, 861, 902, 1199, 1448
NlaIV	GGNNCC	1 cut(s)	321
NmuCI	GTSAC	1 cut(s)	409
NsbI	TGCGCA	2 cut(s)	516, 903
NsiI	ATGCAT	2 cut(s)	564, 1473
NspI	RCATGY	3 cut(s)	562, 661, 861
PasI	CCCWGGG	1 cut(s)	1342
PciI	ACATGT	1 cut(s)	657
PcsI	WCGNNNNNNNCGW	1 cut(s)	419
PctI	GAATGC	4 cut(s)	406, 807, 960, 988
PfeI	GAWTC	4 cut(s)	26, 349, 527, 1301
PfoI	TCCNGGA	1 cut(s)	977
PkrI	GCNGC	4 cut(s)	247, 250, 781, 1109
PleI	GAGTC	2 cut(s)	1186, 1443
PpsI	GAGTC	2 cut(s)	1186, 1443
Ppu21I	YACGTR	1 cut(s)	1315
PscI	ACATGT	1 cut(s)	657
Psp124BI	GAGCTC	1 cut(s)	1038
Psp6I	CCWGG	3 cut(s)	977, 1341, 1408
PspFI	CCCAGC	1 cut(s)	195
PspGI	CCWGG	3 cut(s)	977, 1341, 1408
PspN4I	GGNNCC	1 cut(s)	321
PsuI	RGATCY	2 cut(s)	1118, 1500
RsaI	GTAC	1 cut(s)	759
RsaNI	GTAC	1 cut(s)	758
SacI	GAGCTC	1 cut(s)	1038
SacII	CCGCGG	1 cut(s)	300
SaqAI	TTAA	6 cut(s)	111, 156, 912, 1223, 1280, 1511
SatI	GCNGC	4 cut(s)	246, 249, 780, 1108
Sau3AI	GATC	5 cut(s)	744, 1118, 1192, 1479, 1500
SchI	GAGTC	2 cut(s)	1187, 1444
ScrFI	CCNGG	4 cut(s)	23, 979, 1343, 1410
SduI	GDGCHC	1 cut(s)	1038
SfaNI	GCATC	7 cut(s)	433, 676, 1038, 1209, 1338, 1458, 1480
SfcI	CTRYAG	2 cut(s)	796, 1414
Sfr303I	CCGCGG	1 cut(s)	300
SgrBI	CCGCGG	1 cut(s)	300
Sse9I	AATT	9 cut(s)	163, 326, 478, 623, 629, 639, 922, 1246, 1253
SsiI	CCGC	8 cut(s)	4, 87, 297, 299, 362, 767, 1351, 1366
SspMI	CTAG	2 cut(s)	1031, 1298
SstI	GAGCTC	1 cut(s)	1038
StyD4I	CCNGG	4 cut(s)	21, 977, 1341, 1408
TaaI	ACNGT	3 cut(s)	103, 214, 1308
TaiI	ACGT	2 cut(s)	1080, 1317
TaqI	TCGA	4 cut(s)	1155, 1234, 1390, 1482
TasI	AATT	9 cut(s)	163, 326, 478, 623, 629, 639, 922, 1246, 1253
TatI	WGTACW	1 cut(s)	757
TfiI	GAWTC	4 cut(s)	26, 349, 527, 1301
Tru1I	TTAA	6 cut(s)	111, 156, 912, 1223, 1280, 1511
Tru9I	TTAA	6 cut(s)	111, 156, 912, 1223, 1280, 1511
TseFI	GTSAC	1 cut(s)	409
TseI	GCWGC	4 cut(s)	245, 248, 779, 1107
Tsp45I	GTSAC	1 cut(s)	409
XapI	RAATTY	5 cut(s)	163, 326, 478, 623, 922
XbaI	TCTAGA	1 cut(s)	1030
XceI	RCATGY	3 cut(s)	562, 661, 861
XspI	CTAG	2 cut(s)	1031, 1298
Zsp2I	ATGCAT	2 cut(s)	564, 1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.