Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 AT2G33680 |
| fragaria_vesca | FvH4_7g03841 FvH4_7g03850 |
| malus_domestica | MD02G1276700.v1.1 |
| prunus_persica | Prupe.2G043400_v2.0.a1 |
| pyrus_communis | pycom02g23700 |
| rosa_chinensis | RchiOBHm_Chr1g0326811 RchiOBHm_Chr1g0326821 RchiOBHm_Chr1g0327271 RchiOBHm_Chr1g0327321 |
| rosa_laevigata | RLG00000030002 RLG00000030005 RLG00000030054 |
| rosa_multiflora | Rmu_sc0001021.1_g000002 Rmu_sc0003600.1_g000043 Rmu_sc0005038.1_g000015 Rmu_sc0010151.1_g000003 Rmu_sc0010151.1_g000004 Rmu_sc0020365.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00128000 Rroxscaffold_4G00322770 Rroxscaffold_4G00322870 |
| rosa_rugosa | Rorug01G0064900 Rorug01G0065300 Rorug01G0065400 Rorug01G0065500 Rorug01G0065500 |
| rosa_samantha | Rh1AG082500 Rh1AG083100 Rh1BG065600 Rh1BG065900 Rh1BG066000 Rh1CG080500 Rh1DG087500 Rh2AG148500 Rh2AG148600 Rh2BG154000 Rh2DG154200 Rh3CG329400 |
| rosa_wichuraiana | Rw1G006500 Rw1G006530 Rw2G011590 Rw2G011600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 85 |
| AciI | CCGC | 2 cut(s) | 70, 85 |
| AclWI | GGATC | 1 cut(s) | 214 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 66 |
| AgsI | TTSAA | 1 cut(s) | 151 |
| AjnI | CCWGG | 1 cut(s) | 60 |
| AluBI | AGCT | 1 cut(s) | 138 |
| AluI | AGCT | 1 cut(s) | 138 |
| AlwI | GGATC | 1 cut(s) | 214 |
| AsuHPI | GGTGA | 2 cut(s) | 127, 191 |
| BciT130I | CCWGG | 1 cut(s) | 62 |
| BciVI | GTATCC | 1 cut(s) | 248 |
| BfaI | CTAG | 1 cut(s) | 17 |
| BfmI | CTRYAG | 1 cut(s) | 133 |
| BfuI | GTATCC | 1 cut(s) | 248 |
| Bme1390I | CCNGG | 1 cut(s) | 62 |
| BmrFI | CCNGG | 1 cut(s) | 62 |
| BmsI | GCATC | 3 cut(s) | 57, 177, 199 |
| BsaAI | YACGTR | 1 cut(s) | 34 |
| BsaJI | CCNNGG | 2 cut(s) | 60, 61 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 66 |
| BseBI | CCWGG | 1 cut(s) | 62 |
| BseDI | CCNNGG | 2 cut(s) | 60, 61 |
| BseGI | GGATG | 3 cut(s) | 102, 190, 253 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 66 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 66 |
| Bsp143I | GATC | 1 cut(s) | 219 |
| BspACI | CCGC | 2 cut(s) | 70, 85 |
| BspPI | GGATC | 1 cut(s) | 214 |
| BsrBI | CCGCTC | 1 cut(s) | 85 |
| BssECI | CCNNGG | 2 cut(s) | 60, 61 |
| BssMI | GATC | 1 cut(s) | 219 |
| Bst2UI | CCWGG | 1 cut(s) | 62 |
| Bst4CI | ACNGT | 1 cut(s) | 27 |
| Bst6I | CTCTTC | 1 cut(s) | 146 |
| BstBAI | YACGTR | 1 cut(s) | 34 |
| BstC8I | GCNNGC | 1 cut(s) | 130 |
| BstF5I | GGATG | 3 cut(s) | 102, 190, 253 |
| BstKTI | GATC | 1 cut(s) | 222 |
| BstMBI | GATC | 1 cut(s) | 219 |
| BstNI | CCWGG | 1 cut(s) | 62 |
| BstSCI | CCNGG | 1 cut(s) | 60 |
| BstSFI | CTRYAG | 1 cut(s) | 133 |
| BstX2I | RGATCY | 1 cut(s) | 219 |
| BstYI | RGATCY | 1 cut(s) | 219 |
| BsuI | GTATCC | 1 cut(s) | 248 |
| BtsCI | GGATG | 3 cut(s) | 102, 190, 253 |
| Cac8I | GCNNGC | 1 cut(s) | 130 |
| CviAII | CATG | 1 cut(s) | 164 |
| CviJI | RGCY | 3 cut(s) | 128, 132, 138 |
| CviKI_1 | RGCY | 3 cut(s) | 128, 132, 138 |
| DpnI | GATC | 1 cut(s) | 221 |
| DpnII | GATC | 1 cut(s) | 219 |
| Eam1104I | CTCTTC | 1 cut(s) | 146 |
| EarI | CTCTTC | 1 cut(s) | 146 |
| EcoRII | CCWGG | 1 cut(s) | 60 |
| EcoT22I | ATGCAT | 1 cut(s) | 192 |
| FaeI | CATG | 1 cut(s) | 167 |
| FaiI | YATR | 5 cut(s) | 54, 165, 209, 240, 242 |
| FatI | CATG | 1 cut(s) | 163 |
| FauI | CCCGC | 2 cut(s) | 63, 78 |
| FauNDI | CATATG | 1 cut(s) | 240 |
| FokI | GGATG | 3 cut(s) | 109, 177, 260 |
| FspBI | CTAG | 1 cut(s) | 17 |
| Hin1II | CATG | 1 cut(s) | 167 |
| HinfI | GANTC | 2 cut(s) | 20, 154 |
| HphI | GGTGA | 2 cut(s) | 127, 191 |
| Hpy166II | GTNNAC | 1 cut(s) | 14 |
| Hpy188I | TCNGA | 1 cut(s) | 224 |
| Hpy8I | GTNNAC | 1 cut(s) | 14 |
| HpyAV | CCTTC | 4 cut(s) | 118, 219, 238, 245 |
| HpyCH4III | ACNGT | 1 cut(s) | 27 |
| HpyCH4IV | ACGT | 1 cut(s) | 33 |
| HpyCH4V | TGCA | 1 cut(s) | 190 |
| HpySE526I | ACGT | 1 cut(s) | 33 |
| Hsp92II | CATG | 1 cut(s) | 167 |
| Kzo9I | GATC | 1 cut(s) | 219 |
| LpnPI | CCDG | 5 cut(s) | 47, 74, 114, 124, 143 |
| LweI | GCATC | 3 cut(s) | 57, 177, 199 |
| MaeI | CTAG | 1 cut(s) | 17 |
| MaeII | ACGT | 1 cut(s) | 33 |
| MalI | GATC | 1 cut(s) | 221 |
| MbiI | CCGCTC | 1 cut(s) | 85 |
| MboI | GATC | 1 cut(s) | 219 |
| MboII | GAAGA | 2 cut(s) | 86, 163 |
| MflI | RGATCY | 1 cut(s) | 219 |
| MlyI | GAGTC | 1 cut(s) | 163 |
| MnlI | CCTC | 3 cut(s) | 87, 104, 277 |
| Mph1103I | ATGCAT | 1 cut(s) | 192 |
| MseI | TTAA | 1 cut(s) | 230 |
| MspR9I | CCNGG | 1 cut(s) | 62 |
| MvaI | CCWGG | 1 cut(s) | 62 |
| NdeI | CATATG | 1 cut(s) | 240 |
| NdeII | GATC | 1 cut(s) | 219 |
| NlaIII | CATG | 1 cut(s) | 167 |
| NsiI | ATGCAT | 1 cut(s) | 192 |
| PasI | CCCWGGG | 1 cut(s) | 61 |
| PfeI | GAWTC | 1 cut(s) | 20 |
| PleI | GAGTC | 1 cut(s) | 162 |
| PpsI | GAGTC | 1 cut(s) | 162 |
| Ppu21I | YACGTR | 1 cut(s) | 34 |
| Psp6I | CCWGG | 1 cut(s) | 60 |
| PspGI | CCWGG | 1 cut(s) | 60 |
| PsuI | RGATCY | 1 cut(s) | 219 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| Sau3AI | GATC | 1 cut(s) | 219 |
| SchI | GAGTC | 1 cut(s) | 163 |
| ScrFI | CCNGG | 1 cut(s) | 62 |
| SetI | ASST | 6 cut(s) | 13, 36, 140, 162, 214, 230 |
| SfaNI | GCATC | 3 cut(s) | 57, 177, 199 |
| SfcI | CTRYAG | 1 cut(s) | 133 |
| SsiI | CCGC | 2 cut(s) | 70, 85 |
| SspMI | CTAG | 1 cut(s) | 17 |
| StyD4I | CCNGG | 1 cut(s) | 60 |
| TaaI | ACNGT | 1 cut(s) | 27 |
| TaiI | ACGT | 1 cut(s) | 36 |
| TaqI | TCGA | 1 cut(s) | 109 |
| TfiI | GAWTC | 1 cut(s) | 20 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| TspDTI | ATGAA | 4 cut(s) | 116, 152, 257, 264 |
| XspI | CTAG | 1 cut(s) | 17 |
| Zsp2I | ATGCAT | 1 cut(s) | 192 |