Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0003161

Physical Location & Seq

Genomic Coordinates Forward (+)

6887336 .. 6893397

Gene Structure 6062 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g06900.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGGTGTGAAGGGTGTGCATCAAGGCCATGGTGCCATTGTGCTTCCAATAGAACAGAAGCTCAATGATGAGATGGATATAAGGAAGGACAAGTATCTTAGAGGTGGAGAAGCTAATCTTGAGGCTTTGAAAGATAAAAAGTTGAAGGGTCAACTAGCTGTTAGAGAAGATTTACATCTCAGAACTGCACAAGCTGCGGCTAAGGCTGAGAAGTACCTTCTGCCTAGTGAAGAAGGTTATTTGGAGCCTGAAGGCTTAGAGAAGACATGGAGGATCAAACAGGACGCAATAGCCCCTGCAGTAGATGTCTTAAGTGCAAGGAATCAATACGATATTGTTGTACCAGATCTCGGTCCGTACAGGCTGGATTTCACGCCAAGTGGTCGATACATGACGGTCGGTGGACAGAAGGGCCATCTAGCTATTGTAGACATGAAGCAAATGAGCCTGATCAAAGAATTTCAGGTTAGGGAGACAGTTCGCGATGTGGTATTCTTGCATGATGAGACGATGTTTGCTGCAGCCCAGAAAAAGTACCCATATATTTATAATCGGGATGGAACTGAACTTCACTGCTTAAAGGAACATGGTGCAGCTCTAAGGCTTCGTTATCTTGAACAACACAGACTATTGGCATCAATAAATGAATATGGCCAGCTTCATTATCAGGATGTAACAGATGGTAGGATGATTGGTAGTTACAGGACAGGCTTTGGCCGTACTGATGTGATGCAGGTGAACCGCCACAATGCACTTCTTTCATTGGGTCATTCAGGTGGTAAAGTTACCATGTGGAGTCCTACAAGCTCTTCTGCTGTTATTGAGATGCTGTGCCACAGGGGACCCATCTCAGCAATAGCTTTCCACCCTACCAATCGCGATCTAATGGCCACATCTGGGAAAGAGAAAAAAGTTAAGCTCTGGGACATGAGGAATCTTCAGGGGCCACTCCAGACGTTATCAGGTCAGGCAGAGACTCTGGATTTCAGTCAAAAGGGTCTGCTCGCTCGTGGAACTGGATCTTTTCTACAGGTCCTGAGAGATTCTTCTGGGAATCAGAAGTACGAGAAATATATGACTCATCCATTAGTTAAAGGTTACCAAATAGAAAAGGTGTTGTTTCGACCGTATGAAGATGTTTTATGCATCGGGCACTCCATGGGGTGGTCTAGTATTCTGATACCTGGTTCTGGGAACCCCAATTTTGATTCGTGGGTGGCAAATCCATTTGAAACACGTAAACAGAGAAGAGAGAGGGAAGTGCACTCTCTGCTTGATAAGCTCCCACCTGAGACAATTATGTTTGATCCCACAAAGATTGGCACAGTGAAACCTCCAAGGAAAGAGAAACCAACAAAGGAGGAAAAAGTGGCTGAGCTGGAAGCTGCTGTTGAAGATGCTAAGGACATTGTCCCGAAGAAGAAAACAAAGGGGAGGAGTAAGCCAAGTAAGATGAAGAAGAAGAAGCAGGAGCTAATTGCCGGTGCCAAGAGGCCTTTCTTGGAACAGAAAATGAAAGAGGATGAACAAGCGGCTAGAAAGAAGCAGAAAGCATTGGAGCAAGTGGAACTACCAACATCATTGCAGCGGTTTGCTCGCAAGAAAGCAGCTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005732 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0032040 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BING4CT WD40

Protein Analysis

539

Amino Acids

60.82

Weight (kDa)

9.51

Isoelectric Point (pI)

33.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_EML_2	PF23414	122 - 232	5e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	122 - 324	4.6e-09	WDR5 beta-propeller domain
WD40_Prp19	PF24814	123 - 346	3.1e-13	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	170 - 390	4.1e-12	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	185 - 381	2.1e-12	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	231 - 323	5.9e-08	WDR3 first beta-propeller domain
BING4CT	PF08149	357 - 436	8.4e-34	BING4CT (NUC141) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003161)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10530
fragaria_vesca	FvH4_7g06900 FvH4_7g06900
malus_domestica	MD07G1075700.v1.1 MD13G1165600.v1.1
prunus_persica	Prupe.2G096600_v2.0.a1 Prupe.2G096600_v2.0.a1
pyrus_communis	pycom02g20600 pycom07g05980 pycom13g14170
rosa_chinensis	RchiOBHm_Chr1g0336741 RchiOBHm_Chr1g0336801 RchiOBHm_Chr1g0336811 RchiOBHm_Chr1g0336821
rosa_laevigata	RLG00000029332 RLG00000029335 RLG00000029337
rosa_multiflora	Rmu_sc0000907.1_g000012 Rmu_sc0000907.1_g000017 Rmu_sc0000907.1_g000032 Rmu_sc0000907.1_g000033 Rmu_sc0011778.1_g000010
rosa_roxburghii	Rroxscaffold_4G00315350
rosa_rugosa	Rorug01G0127500 Rorug01G0127800 Rorug01G0127900
rosa_samantha	Rh1AG148700 Rh1AG148900 Rh1BG116800 Rh1BG116900 Rh1CG140100 Rh1DG155500 Rh1DG156000 Rh1DG156100 Rh5AG191600
rosa_wichuraiana	Rw1G012000 Rw1G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	549
AarI	CACCTGC	1 cut(s)	724
Acc36I	ACCTGC	1 cut(s)	724
AccB1I	GGYRCC	2 cut(s)	32, 1484
AccB7I	CCANNNNNTGG	1 cut(s)	1164
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	2 cut(s)	483, 879
AciI	CCGC	4 cut(s)	197, 742, 1532, 1588
AclWI	GGATC	3 cut(s)	281, 1027, 1301
AcoI	YGGCCR	3 cut(s)	652, 715, 888
AcsI	RAATTY	1 cut(s)	458
AcuI	CTGAAG	2 cut(s)	270, 923
AfaI	GTAC	6 cut(s)	215, 342, 359, 536, 721, 1064
AfiI	CCNNNNNNNGG	4 cut(s)	350, 897, 1164, 1190
AflII	CTTAAG	1 cut(s)	310
AflIII	ACRYGT	1 cut(s)	1235
AgsI	TTSAA	5 cut(s)	130, 145, 617, 1232, 1394
AjnI	CCWGG	1 cut(s)	1183
AjuI	GAANNNNNNNTTGG	2 cut(s)	1481, 1513
Alw21I	GWGCWC	1 cut(s)	1266
Alw26I	GTCTC	4 cut(s)	467, 500, 968, 1286
Alw44I	GTGCAC	1 cut(s)	1262
AlwI	GGATC	3 cut(s)	281, 1027, 1301
AlwNI	CAGNNNCTG	1 cut(s)	1036
AoxI	GGCC	7 cut(s)	25, 412, 652, 715, 888, 944, 1493
ApaLI	GTGCAC	1 cut(s)	1262
ApeKI	GCWGC	7 cut(s)	194, 518, 521, 593, 1385, 1585, 1607
ApoI	RAATTY	1 cut(s)	458
AspS9I	GGNCC	5 cut(s)	353, 412, 842, 944, 1033
AsuHPI	GGTGA	1 cut(s)	748
AvaII	GGWCC	3 cut(s)	353, 842, 1033
BaeGI	GKGCMC	2 cut(s)	1155, 1266
BalI	TGGCCA	2 cut(s)	654, 890
BanI	GGYRCC	2 cut(s)	32, 1484
BauI	CACGAG	1 cut(s)	1008
BbsI	GAAGAC	1 cut(s)	269
Bbv12I	GWGCWC	1 cut(s)	1266
BbvI	GCAGC	6 cut(s)	181, 505, 533, 605, 1372, 1597
BccI	CCATC	5 cut(s)	67, 423, 551, 674, 854
BceAI	ACGGC	1 cut(s)	702
BciT130I	CCWGG	1 cut(s)	1185
BclI	TGATCA	1 cut(s)	450
BcoDI	GTCTC	4 cut(s)	467, 500, 968, 1286
BfaI	CTAG	5 cut(s)	155, 225, 419, 1170, 1536
BfmI	CTRYAG	3 cut(s)	297, 519, 1028
BfrI	CTTAAG	1 cut(s)	310
BfuAI	ACCTGC	1 cut(s)	724
BglII	AGATCT	1 cut(s)	346
BisI	GCNGC	9 cut(s)	195, 198, 519, 522, 594, 1386, 1533, 1586, 1608
BlpI	GCTNAGC	1 cut(s)	1374
BlsI	GCNGC	9 cut(s)	196, 199, 520, 523, 595, 1387, 1534, 1587, 1609
Bme1390I	CCNGG	1 cut(s)	1185
Bme18I	GGWCC	3 cut(s)	353, 842, 1033
BmgT120I	GGNCC	5 cut(s)	353, 412, 842, 944, 1033
BmiI	GGNNCC	7 cut(s)	34, 246, 843, 844, 945, 1196, 1486
BmrFI	CCNGG	1 cut(s)	1185
BmsI	GCATC	6 cut(s)	28, 644, 720, 816, 1155, 1387
BpiI	GAAGAC	1 cut(s)	269
BpmI	CTGGAG	1 cut(s)	935
Bpu10I	CCTNAGC	2 cut(s)	201, 1401
Bpu1102I	GCTNAGC	1 cut(s)	1374
BpuEI	CTTGAG	1 cut(s)	140
BsaAI	YACGTR	1 cut(s)	1238
BsaBI	GATNNNNATC	1 cut(s)	174
BsaJI	CCNNGG	3 cut(s)	28, 1158, 1337
Bsc4I	CCNNNNNNNGG	4 cut(s)	350, 897, 1164, 1190
Bse118I	RCCGGY	1 cut(s)	1481
Bse1I	ACTGG	1 cut(s)	1021
Bse3DI	GCAATG	1 cut(s)	1580
Bse8I	GATNNNNATC	1 cut(s)	174
BseBI	CCWGG	1 cut(s)	1185
BseDI	CCNNGG	3 cut(s)	28, 1158, 1337
BseGI	GGATG	5 cut(s)	562, 676, 693, 1081, 1528
BseJI	GATNNNNATC	1 cut(s)	174
BseLI	CCNNNNNNNGG	4 cut(s)	350, 897, 1164, 1190
BseMI	GCAATG	1 cut(s)	1580
BseMII	CTCAG	6 cut(s)	193, 198, 864, 1028, 1281, 1365
BseNI	ACTGG	1 cut(s)	1021
BseRI	GAGGAG	1 cut(s)	1450
BseSI	GKGCMC	2 cut(s)	1155, 1266
BseXI	GCAGC	6 cut(s)	181, 505, 533, 605, 1372, 1597
BsgI	GTGCAG	2 cut(s)	171, 612
Bsh1236I	CGCG	2 cut(s)	483, 879
Bsh1285I	CGRYCG	2 cut(s)	399, 1127
BshFI	GGCC	7 cut(s)	27, 414, 654, 717, 890, 946, 1495
BshNI	GGYRCC	2 cut(s)	32, 1484
BsiEI	CGRYCG	2 cut(s)	399, 1127
BsiHKAI	GWGCWC	1 cut(s)	1266
BsiSI	CCGG	1 cut(s)	1482
BslFI	GGGAC	3 cut(s)	855, 938, 1397
BslI	CCNNNNNNNGG	4 cut(s)	350, 897, 1164, 1190
BsmAI	GTCTC	4 cut(s)	467, 500, 968, 1286
BsmBI	CGTCTC	1 cut(s)	500
BsmFI	GGGAC	3 cut(s)	855, 938, 1397
BsnI	GGCC	7 cut(s)	27, 414, 654, 717, 890, 946, 1495
Bsp1286I	GDGCHC	2 cut(s)	1155, 1266
Bsp143I	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
Bsp1720I	GCTNAGC	1 cut(s)	1374
Bsp19I	CCATGG	2 cut(s)	28, 1158
Bsp68I	TCGCGA	2 cut(s)	483, 879
BspACI	CCGC	4 cut(s)	197, 742, 1532, 1588
BspANI	GGCC	7 cut(s)	27, 414, 654, 717, 890, 946, 1495
BspCNI	CTCAG	6 cut(s)	192, 199, 863, 1029, 1282, 1366
BspFNI	CGCG	2 cut(s)	483, 879
BspLI	GGNNCC	7 cut(s)	34, 246, 843, 844, 945, 1196, 1486
BspMAI	CTGCAG	2 cut(s)	301, 523
BspMI	ACCTGC	1 cut(s)	724
BspPI	GGATC	3 cut(s)	281, 1027, 1301
BspQI	GCTCTTC	1 cut(s)	814
BspT107I	GGYRCC	2 cut(s)	32, 1484
BspTI	CTTAAG	1 cut(s)	310
BsrDI	GCAATG	1 cut(s)	1580
BsrFI	RCCGGY	1 cut(s)	1481
BsrI	ACTGG	1 cut(s)	1021
BssAI	RCCGGY	1 cut(s)	1481
BssECI	CCNNGG	3 cut(s)	28, 1158, 1337
BssMI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
BssSI	CACGAG	1 cut(s)	1008
BssT1I	CCWWGG	3 cut(s)	28, 1158, 1337
Bst2BI	CACGAG	1 cut(s)	1008
Bst2UI	CCWGG	1 cut(s)	1185
Bst4CI	ACNGT	4 cut(s)	397, 478, 1128, 1327
Bst6I	CTCTTC	2 cut(s)	814, 1243
BstAFI	CTTAAG	1 cut(s)	310
BstAPI	GCANNNNNTGC	2 cut(s)	194, 1270
BstBAI	YACGTR	1 cut(s)	1238
BstC8I	GCNNGC	3 cut(s)	656, 1005, 1597
BstDSI	CCRYGG	2 cut(s)	28, 1158
BstEII	GGTNACC	1 cut(s)	1097
BstF5I	GGATG	5 cut(s)	562, 676, 693, 1081, 1528
BstFNI	CGCG	2 cut(s)	483, 879
BstKTI	GATC	6 cut(s)	276, 349, 453, 883, 1022, 1309
BstMAI	GTCTC	4 cut(s)	467, 500, 968, 1286
BstMBI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
BstMCI	CGRYCG	2 cut(s)	399, 1127
BstMWI	GCNNNNNNNGC	4 cut(s)	194, 203, 1270, 1279
BstNI	CCWGG	1 cut(s)	1185
BstPI	GGTNACC	1 cut(s)	1097
BstSCI	CCNGG	1 cut(s)	1183
BstSFI	CTRYAG	3 cut(s)	297, 519, 1028
BstSLI	GKGCMC	2 cut(s)	1155, 1266
BstUI	CGCG	2 cut(s)	483, 879
BstV1I	GCAGC	6 cut(s)	181, 505, 533, 605, 1372, 1597
BstV2I	GAAGAC	1 cut(s)	269
BstX2I	RGATCY	2 cut(s)	346, 1019
BstYI	RGATCY	2 cut(s)	346, 1019
BsuRI	GGCC	7 cut(s)	27, 414, 654, 717, 890, 946, 1495
BtgI	CCRYGG	2 cut(s)	28, 1158
BtgZI	GCGATG	1 cut(s)	498
BtsCI	GGATG	5 cut(s)	562, 676, 693, 1081, 1528
BtsI	GCAGTG	1 cut(s)	571
BtsIMutI	CAGTG	2 cut(s)	571, 1332
BtuMI	TCGCGA	2 cut(s)	483, 879
BveI	ACCTGC	1 cut(s)	724
Cac8I	GCNNGC	3 cut(s)	656, 1005, 1597
CaiI	CAGNNNCTG	1 cut(s)	1036
Cfr10I	RCCGGY	1 cut(s)	1481
Cfr13I	GGNCC	5 cut(s)	353, 412, 842, 944, 1033
CpoI	CGGWCCG	1 cut(s)	353
CseI	GACGC	1 cut(s)	293
CsiI	ACCWGGT	1 cut(s)	1183
Csp6I	GTAC	6 cut(s)	214, 341, 358, 535, 720, 1063
CspCI	CAANNNNNGTGG	2 cut(s)	1300, 1335
CspI	CGGWCCG	1 cut(s)	353
CviQI	GTAC	6 cut(s)	214, 341, 358, 535, 720, 1063
DpnI	GATC	6 cut(s)	275, 348, 452, 882, 1021, 1308
DpnII	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
EaeI	YGGCCR	3 cut(s)	652, 715, 888
Eam1104I	CTCTTC	2 cut(s)	814, 1243
EarI	CTCTTC	2 cut(s)	814, 1243
Eco130I	CCWWGG	3 cut(s)	28, 1158, 1337
Eco147I	AGGCCT	1 cut(s)	1495
Eco47I	GGWCC	3 cut(s)	353, 842, 1033
Eco57I	CTGAAG	2 cut(s)	270, 923
Eco91I	GGTNACC	1 cut(s)	1097
EcoO109I	RGGNCCY	2 cut(s)	842, 1033
EcoO65I	GGTNACC	1 cut(s)	1097
EcoRII	CCWGG	1 cut(s)	1183
EcoT14I	CCWWGG	3 cut(s)	28, 1158, 1337
EcoT22I	ATGCAT	1 cut(s)	1148
ErhI	CCWWGG	3 cut(s)	28, 1158, 1337
Esp3I	CGTCTC	1 cut(s)	500
FalI	AAGNNNNNCTT	2 cut(s)	102, 134
FaqI	GGGAC	3 cut(s)	855, 938, 1397
FbaI	TGATCA	1 cut(s)	450
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	9 cut(s)	195, 198, 519, 522, 594, 1386, 1533, 1586, 1608
FokI	GGATG	5 cut(s)	569, 683, 700, 1068, 1535
Fsp4HI	GCNGC	9 cut(s)	195, 198, 519, 522, 594, 1386, 1533, 1586, 1608
FspBI	CTAG	5 cut(s)	155, 225, 419, 1170, 1536
GluI	GCNGC	9 cut(s)	195, 198, 519, 522, 594, 1386, 1533, 1586, 1608
GsuI	CTGGAG	1 cut(s)	935
HaeIII	GGCC	7 cut(s)	27, 414, 654, 717, 890, 946, 1495
HapII	CCGG	1 cut(s)	1482
HgaI	GACGC	1 cut(s)	293
HincII	GTYRAC	1 cut(s)	152
HindII	GTYRAC	1 cut(s)	152
HinfI	GANTC	8 cut(s)	322, 796, 934, 976, 1043, 1054, 1078, 1208
HpaII	CCGG	1 cut(s)	1482
HphI	GGTGA	1 cut(s)	748
Hpy166II	GTNNAC	6 cut(s)	152, 404, 430, 739, 1241, 1264
Hpy188I	TCNGA	3 cut(s)	182, 1059, 1179
Hpy8I	GTNNAC	6 cut(s)	152, 404, 430, 739, 1241, 1264
HpyAV	CCTTC	7 cut(s)	4, 79, 139, 227, 227, 245, 403
HpyCH4III	ACNGT	4 cut(s)	397, 478, 1128, 1327
HpyCH4IV	ACGT	2 cut(s)	956, 1237
HpyF10VI	GCNNNNNNNGC	4 cut(s)	194, 203, 1270, 1279
HpySE526I	ACGT	2 cut(s)	956, 1237
KflI	GGGWCCC	1 cut(s)	842
Ksp22I	TGATCA	1 cut(s)	450
Kzo9I	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
LguI	GCTCTTC	1 cut(s)	814
LmnI	GCTCC	4 cut(s)	244, 1287, 1471, 1558
Lsp1109I	GCAGC	6 cut(s)	181, 505, 533, 605, 1372, 1597
LweI	GCATC	6 cut(s)	28, 644, 720, 816, 1155, 1387
MabI	ACCWGGT	1 cut(s)	1183
MaeI	CTAG	5 cut(s)	155, 225, 419, 1170, 1536
MaeII	ACGT	2 cut(s)	956, 1237
MaeIII	GTNAC	4 cut(s)	673, 698, 784, 1097
MalI	GATC	6 cut(s)	275, 348, 452, 882, 1021, 1308
MboI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
MflI	RGATCY	2 cut(s)	346, 1019
MhlI	GDGCHC	2 cut(s)	1155, 1266
MlsI	TGGCCA	2 cut(s)	654, 890
MluCI	AATT	4 cut(s)	458, 1201, 1296, 1476
MluNI	TGGCCA	2 cut(s)	654, 890
MlyI	GAGTC	3 cut(s)	805, 970, 1072
Mox20I	TGGCCA	2 cut(s)	654, 890
Mph1103I	ATGCAT	1 cut(s)	1148
MscI	TGGCCA	2 cut(s)	654, 890
MseI	TTAA	4 cut(s)	311, 578, 915, 1092
MslI	CAYNNNNRTG	1 cut(s)	774
Msp20I	TGGCCA	2 cut(s)	654, 890
MspA1I	CMGCKG	1 cut(s)	1588
MspCI	CTTAAG	1 cut(s)	310
MspI	CCGG	1 cut(s)	1482
MspR9I	CCNGG	1 cut(s)	1185
MvaI	CCWGG	1 cut(s)	1185
MvnI	CGCG	2 cut(s)	483, 879
MwoI	GCNNNNNNNGC	4 cut(s)	194, 203, 1270, 1279
NcoI	CCATGG	2 cut(s)	28, 1158
NdeII	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
NlaIV	GGNNCC	7 cut(s)	34, 246, 843, 844, 945, 1196, 1486
NruI	TCGCGA	2 cut(s)	483, 879
NsiI	ATGCAT	1 cut(s)	1148
PaqCI	CACCTGC	1 cut(s)	724
PceI	AGGCCT	1 cut(s)	1495
PciSI	GCTCTTC	1 cut(s)	814
PfeI	GAWTC	5 cut(s)	322, 934, 1043, 1054, 1208
PflFI	GACNNNGTC	1 cut(s)	1409
PflMI	CCANNNNNTGG	1 cut(s)	1164
PkrI	GCNGC	9 cut(s)	196, 199, 520, 523, 595, 1387, 1534, 1587, 1609
PleI	GAGTC	3 cut(s)	804, 970, 1072
PpsI	GAGTC	3 cut(s)	804, 970, 1072
Ppu21I	YACGTR	1 cut(s)	1238
PpuMI	RGGWCCY	2 cut(s)	842, 1033
PsiI	TTATAA	1 cut(s)	549
Psp5II	RGGWCCY	2 cut(s)	842, 1033
Psp6I	CCWGG	1 cut(s)	1183
PspEI	GGTNACC	1 cut(s)	1097
PspGI	CCWGG	1 cut(s)	1183
PspN4I	GGNNCC	7 cut(s)	34, 246, 843, 844, 945, 1196, 1486
PspPI	GGNCC	5 cut(s)	353, 412, 842, 944, 1033
PspPPI	RGGWCCY	2 cut(s)	842, 1033
PstI	CTGCAG	2 cut(s)	301, 523
PstNI	CAGNNNCTG	1 cut(s)	1036
PsuI	RGATCY	2 cut(s)	346, 1019
PsyI	GACNNNGTC	1 cut(s)	1409
RruI	TCGCGA	2 cut(s)	483, 879
RsaI	GTAC	6 cut(s)	215, 342, 359, 536, 721, 1064
RsaNI	GTAC	6 cut(s)	214, 341, 358, 535, 720, 1063
RseI	CAYNNNNRTG	1 cut(s)	774
Rsr2I	CGGWCCG	1 cut(s)	353
RsrII	CGGWCCG	1 cut(s)	353
SapI	GCTCTTC	1 cut(s)	814
SaqAI	TTAA	4 cut(s)	311, 578, 915, 1092
SatI	GCNGC	9 cut(s)	195, 198, 519, 522, 594, 1386, 1533, 1586, 1608
Sau3AI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
Sau96I	GGNCC	5 cut(s)	353, 412, 842, 944, 1033
SchI	GAGTC	3 cut(s)	805, 970, 1072
ScrFI	CCNGG	1 cut(s)	1185
SduI	GDGCHC	2 cut(s)	1155, 1266
SexAI	ACCWGGT	1 cut(s)	1183
SfaNI	GCATC	6 cut(s)	28, 644, 720, 816, 1155, 1387
SfcI	CTRYAG	3 cut(s)	297, 519, 1028
SinI	GGWCC	3 cut(s)	353, 842, 1033
SmiMI	CAYNNNNRTG	1 cut(s)	774
SmlI	CTYRAG	2 cut(s)	119, 310
SmoI	CTYRAG	2 cut(s)	119, 310
Sse9I	AATT	4 cut(s)	458, 1201, 1296, 1476
SseBI	AGGCCT	1 cut(s)	1495
SsiI	CCGC	4 cut(s)	197, 742, 1532, 1588
SspMI	CTAG	5 cut(s)	155, 225, 419, 1170, 1536
StuI	AGGCCT	1 cut(s)	1495
StyD4I	CCNGG	1 cut(s)	1183
StyI	CCWWGG	3 cut(s)	28, 1158, 1337
TaaI	ACNGT	4 cut(s)	397, 478, 1128, 1327
TaiI	ACGT	2 cut(s)	959, 1240
TaqI	TCGA	2 cut(s)	385, 1123
TaqII	GACCGA	1 cut(s)	341
TasI	AATT	4 cut(s)	458, 1201, 1296, 1476
TauI	GCSGC	2 cut(s)	200, 1535
TfiI	GAWTC	5 cut(s)	322, 934, 1043, 1054, 1208
Tru1I	TTAA	4 cut(s)	311, 578, 915, 1092
Tru9I	TTAA	4 cut(s)	311, 578, 915, 1092
TscAI	CASTG	2 cut(s)	578, 1332
TseI	GCWGC	7 cut(s)	194, 518, 521, 593, 1385, 1585, 1607
TspDTI	ATGAA	8 cut(s)	449, 650, 660, 750, 1146, 1469, 1529, 1539
TspGWI	ACGGA	1 cut(s)	345
TspRI	CASTG	2 cut(s)	578, 1332
Tth111I	GACNNNGTC	1 cut(s)	1409
Van91I	CCANNNNNTGG	1 cut(s)	1164
Vha464I	CTTAAG	1 cut(s)	310
VneI	GTGCAC	1 cut(s)	1262
VpaK11BI	GGWCC	3 cut(s)	353, 842, 1033
XapI	RAATTY	1 cut(s)	458
XmiI	GTMKAC	1 cut(s)	429
XspI	CTAG	5 cut(s)	155, 225, 419, 1170, 1536
Zsp2I	ATGCAT	1 cut(s)	1148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.