Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0003161

Physical Location & Seq

Genomic Coordinates Forward (+)

13172486 .. 13183621

Gene Structure 11136 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1165600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGGGTGTGCAACAAGATGAGGGCAATTATGTGCCTCCAAACGAGAAATCCGACAATATAACTGATGAGCTCGAGATAAAAATGAACAAGTTTCTTAGAGGCAAAGCTAATTTGGAGGGCTTGCAAGATAAAAAGTTGAAGGGTCAACTTACCATTCGAGAAGAATTATATGGGAAATCTGCACAAGCTGCTGCCATGGCCGAGAAGTGGCTTCTACCAAGTGAGGGAGGCTATTTGGAGGCTGAAGGCATGGAGAAGACATGGAGGATCAAACAAGAATCAATTGCTCGTGAAGTAGATATATCAAGCTCAAGGAATCAATTTGATATTATCTTACCAGATCTCGGACCGTACACGCTGGATTTCACCTCAAGTGGTCGCCATATGGCAATTGGTGGACGCAAGGGCCATCTGGCTATTGTAGACATGAAGACTATGAGGCTGATTAAAGAATTTCAGGTTAGAGAAACAGTGCGGGATGTGGTGTTCTTGCACAACGATTTATTCTTTGCTGCAGCCCAGAAAAGGTATCCCTATATTTATAACCGGGATGGCACTGAACTTCATTGCTTAAAGGAACATGGTGCAGTTTTAAGGCTTCAATTCTTGAAAAACCACTTCCTTTTGGCATCAATAAACAATTTTGGGCAGCTTCATTATCAGGATGTGACAATGGGTGAGATGGTAGGTAGTTACAGGACAGGCATAGGCCGTACTGATGCGATGCAGGTGAACCCCTATAATGGGGTTGTTGCTTTGGGTCAATCACTTGGTACAGTTTCCATGTGGAAGCCTACAAGCTCTGCGTCTCTACTTAGACTTCTGTGTCACAAGGGACCCGTCTCGGCAATCGCATTCCACCCTAATGGCCATCTCATGGCGACAGCTGGGAAAGAGAGGAAAATTAAGCTTTGGGACTTGAGGAAACTTGGGGATGAACCGCTCCAAACTTTACCGGGCAATGCAAAGACGTTGGATTTTAGTCAGAAGGGTCTTTTAGCTTGTCAGCTGGGAAATGGATCATCTGTACAAATCTTGAGAGATTTGGATGGGAATCAGATGTACAAGACATACATGAATCATGGAATGGTTAAAGGTTACCAAATAGAAAAGCTGTTGTTTCGACCTTATGAAGATGTTTTAGGCATAGGGCACTCTATGGGATGGTCCAGTATCCTGATTCCTGGTTCAGGGGAACCCAATTTTGATACCTTGGTGGCAAATCCATTTGAAACGTCTAAACAAAGAAGAGAGAGTGAAGTGCACTCTTTACTTGATAAGCTCCCGGCTGAGACGATTATGCTTGATCCTGCAAAGATCGGCACATTGAAGCCCGAGAGGAAGAAAGAGAAACCAACAAAACAAGAGAAAATGGCCGAGATTGAAGTTGCTGTTGAAGTTGTGAAGGGCATTAAACTGAAGAAGAAAACAAAGGGGAGGAGTAAGCCGAGTAAGAGGACGATAAAGAAAAAAGACTTAATTGCAAAAGCAAAGAGTCCTTTCTTAGCGCAACAAATGAAAGAGGAAGAACAAGTAGCTAGAAAGAAGCAGAAAACGACTGAATTTGTGGAGCCACCAACATCGTTGATGCGGTTTGTCCGCAAGGAAGCAACTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005732 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0032040 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BING4CT WD40

Protein Analysis

540

Amino Acids

60.64

Weight (kDa)

9.47

Isoelectric Point (pI)

36.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	121 - 365	2.5e-19	Prp19 WD40 domain
WD40_CDC20-Fz	PF24807	171 - 353	8.9e-11	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	183 - 363	2e-13	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	222 - 308	6.9e-10	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	243 - 363	6.1e-08	WDR5 beta-propeller domain
WD40	PF00400	273 - 306	1.8e-07	WD domain, G-beta repeat
BING4CT	PF08149	358 - 436	1.6e-34	BING4CT (NUC141) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003161)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10530
fragaria_vesca	FvH4_7g06900 FvH4_7g06900
malus_domestica	MD07G1075700.v1.1 MD13G1165600.v1.1
prunus_persica	Prupe.2G096600_v2.0.a1 Prupe.2G096600_v2.0.a1
pyrus_communis	pycom02g20600 pycom07g05980 pycom13g14170
rosa_chinensis	RchiOBHm_Chr1g0336741 RchiOBHm_Chr1g0336801 RchiOBHm_Chr1g0336811 RchiOBHm_Chr1g0336821
rosa_laevigata	RLG00000029332 RLG00000029335 RLG00000029337
rosa_multiflora	Rmu_sc0000907.1_g000012 Rmu_sc0000907.1_g000017 Rmu_sc0000907.1_g000032 Rmu_sc0000907.1_g000033 Rmu_sc0011778.1_g000010
rosa_roxburghii	Rroxscaffold_4G00315350
rosa_rugosa	Rorug01G0127500 Rorug01G0127800 Rorug01G0127900
rosa_samantha	Rh1AG148700 Rh1AG148900 Rh1BG116800 Rh1BG116900 Rh1CG140100 Rh1DG155500 Rh1DG156000 Rh1DG156100 Rh5AG191600
rosa_wichuraiana	Rw1G012000 Rw1G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	543
AarI	CACCTGC	1 cut(s)	718
AasI	GACNNNNNNGTC	1 cut(s)	825
Acc36I	ACCTGC	1 cut(s)	718
AccB7I	CCANNNNNTGG	1 cut(s)	877
AccBSI	CCGCTC	1 cut(s)	943
AccI	GTMKAC	1 cut(s)	423
AciI	CCGC	4 cut(s)	475, 941, 1591, 1600
AclWI	GGATC	3 cut(s)	275, 1027, 1301
AcoI	YGGCCR	3 cut(s)	198, 868, 1374
AcsI	RAATTY	2 cut(s)	452, 1562
AcuI	CTGAAG	2 cut(s)	264, 1439
AfaI	GTAC	5 cut(s)	353, 715, 775, 1029, 1064
AfiI	CCNNNNNNNGG	8 cut(s)	207, 224, 344, 525, 743, 744, 877, 1190
AgsI	TTSAA	7 cut(s)	139, 602, 610, 1232, 1330, 1385, 1397
AjnI	CCWGG	1 cut(s)	1183
AloI	GAACNNNNNNTCC	2 cut(s)	470, 502
Alw21I	GWGCWC	2 cut(s)	72, 1266
Alw26I	GTCTC	3 cut(s)	813, 847, 1286
Alw44I	GTGCAC	1 cut(s)	1262
AlwI	GGATC	3 cut(s)	275, 1027, 1301
Ama87I	CYCGRG	2 cut(s)	71, 1334
AoxI	GGCC	5 cut(s)	198, 406, 709, 868, 1374
ApaLI	GTGCAC	1 cut(s)	1262
ApeKI	GCWGC	5 cut(s)	188, 191, 512, 515, 649
ApoI	RAATTY	2 cut(s)	452, 1562
AspLEI	GCGC	1 cut(s)	1510
AspS9I	GGNCC	4 cut(s)	347, 406, 836, 1167
AsuC2I	CCSGG	3 cut(s)	548, 957, 1286
AsuHPI	GGTGA	3 cut(s)	358, 689, 742
AvaI	CYCGRG	2 cut(s)	71, 1334
AvaII	GGWCC	3 cut(s)	347, 836, 1167
BaeGI	GKGCMC	2 cut(s)	1155, 1266
BaeI	ACNNNNGTAYC	2 cut(s)	1200, 1233
BalI	TGGCCA	1 cut(s)	870
BanII	GRGCYC	1 cut(s)	72
BauI	CACGAG	1 cut(s)	288
BbsI	GAAGAC	2 cut(s)	263, 437
Bbv12I	GWGCWC	2 cut(s)	72, 1266
BbvI	GCAGC	5 cut(s)	175, 178, 499, 527, 661
BccI	CCATC	6 cut(s)	417, 545, 676, 879, 1043, 1158
BceAI	ACGGC	1 cut(s)	696
BciT130I	CCWGG	1 cut(s)	1185
BciVI	GTATCC	2 cut(s)	540, 1184
BcnI	CCSGG	3 cut(s)	548, 957, 1286
BcoDI	GTCTC	3 cut(s)	813, 847, 1286
BfaI	CTAG	1 cut(s)	1539
BfmI	CTRYAG	1 cut(s)	513
BfuAI	ACCTGC	1 cut(s)	718
BfuI	GTATCC	2 cut(s)	540, 1184
BglII	AGATCT	1 cut(s)	340
BisI	GCNGC	5 cut(s)	189, 192, 513, 516, 650
BlsI	GCNGC	5 cut(s)	190, 193, 514, 517, 651
Bme1390I	CCNGG	4 cut(s)	548, 957, 1185, 1286
Bme18I	GGWCC	3 cut(s)	347, 836, 1167
BmeT110I	CYCGRG	2 cut(s)	71, 1334
BmgT120I	GGNCC	4 cut(s)	347, 406, 836, 1167
BmiI	GGNNCC	4 cut(s)	837, 838, 1197, 1572
BmrFI	CCNGG	4 cut(s)	548, 957, 1185, 1286
BmsI	GCATC	4 cut(s)	638, 709, 714, 1578
BpiI	GAAGAC	2 cut(s)	263, 437
BpuEI	CTTGAG	4 cut(s)	295, 355, 940, 1057
BpuMI	CCSGG	3 cut(s)	548, 957, 1286
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaJI	CCNNGG	2 cut(s)	195, 1212
Bsc4I	CCNNNNNNNGG	8 cut(s)	207, 224, 344, 525, 743, 744, 877, 1190
Bse1I	ACTGG	1 cut(s)	1170
Bse3DI	GCAATG	2 cut(s)	565, 967
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	1 cut(s)	1185
BseDI	CCNNGG	2 cut(s)	195, 1212
BseGI	GGATG	6 cut(s)	484, 556, 670, 940, 1054, 1169
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	8 cut(s)	207, 224, 344, 525, 743, 744, 877, 1190
BseMI	GCAATG	2 cut(s)	565, 967
BseMII	CTCAG	1 cut(s)	1281
BseNI	ACTGG	1 cut(s)	1170
BseRI	GAGGAG	1 cut(s)	1453
BseSI	GKGCMC	2 cut(s)	1155, 1266
BseXI	GCAGC	5 cut(s)	175, 178, 499, 527, 661
BseYI	CCCAGC	2 cut(s)	887, 1009
BsgI	GTGCAG	2 cut(s)	165, 606
BshFI	GGCC	5 cut(s)	200, 408, 711, 870, 1376
BsiHKAI	GWGCWC	2 cut(s)	72, 1266
BsiHKCI	CYCGRG	2 cut(s)	71, 1334
BsiSI	CCGG	3 cut(s)	547, 956, 1286
BslFI	GGGAC	2 cut(s)	849, 929
BslI	CCNNNNNNNGG	8 cut(s)	207, 224, 344, 525, 743, 744, 877, 1190
BsmAI	GTCTC	3 cut(s)	813, 847, 1286
BsmBI	CGTCTC	3 cut(s)	813, 847, 1286
BsmFI	GGGAC	2 cut(s)	849, 929
BsmI	GAATGC	1 cut(s)	854
BsnI	GGCC	5 cut(s)	200, 408, 711, 870, 1376
BsoBI	CYCGRG	2 cut(s)	71, 1334
Bsp1286I	GDGCHC	3 cut(s)	72, 1155, 1266
Bsp1407I	TGTACA	2 cut(s)	1027, 1062
Bsp143I	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
Bsp19I	CCATGG	1 cut(s)	195
BspACI	CCGC	4 cut(s)	475, 941, 1591, 1600
BspANI	GGCC	5 cut(s)	200, 408, 711, 870, 1376
BspCNI	CTCAG	1 cut(s)	1282
BspLI	GGNNCC	4 cut(s)	837, 838, 1197, 1572
BspMAI	CTGCAG	1 cut(s)	517
BspMI	ACCTGC	1 cut(s)	718
BspPI	GGATC	3 cut(s)	275, 1027, 1301
BsrBI	CCGCTC	1 cut(s)	943
BsrDI	GCAATG	2 cut(s)	565, 967
BsrGI	TGTACA	2 cut(s)	1027, 1062
BsrI	ACTGG	1 cut(s)	1170
BssECI	CCNNGG	2 cut(s)	195, 1212
BssMI	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
BssSI	CACGAG	1 cut(s)	288
BssT1I	CCWWGG	2 cut(s)	195, 1212
Bst2BI	CACGAG	1 cut(s)	288
Bst2UI	CCWGG	1 cut(s)	1185
Bst4CI	ACNGT	3 cut(s)	351, 472, 778
Bst6I	CTCTTC	1 cut(s)	1243
BstAPI	GCANNNNNTGC	1 cut(s)	188
BstAUI	TGTACA	2 cut(s)	1027, 1062
BstC8I	GCNNGC	1 cut(s)	122
BstDEI	CTNAG	4 cut(s)	95, 815, 1290, 1504
BstDSI	CCRYGG	1 cut(s)	195
BstEII	GGTNACC	1 cut(s)	1097
BstENI	CCTNNNNNAGG	1 cut(s)	1188
BstF5I	GGATG	6 cut(s)	484, 556, 670, 940, 1054, 1169
BstHHI	GCGC	1 cut(s)	1510
BstKTI	GATC	5 cut(s)	270, 343, 1022, 1309, 1320
BstMAI	GTCTC	3 cut(s)	813, 847, 1286
BstMBI	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
BstMWI	GCNNNNNNNGC	2 cut(s)	188, 197
BstNI	CCWGG	1 cut(s)	1185
BstPI	GGTNACC	1 cut(s)	1097
BstSCI	CCNGG	4 cut(s)	546, 955, 1183, 1284
BstSFI	CTRYAG	1 cut(s)	513
BstSLI	GKGCMC	2 cut(s)	1155, 1266
BstV1I	GCAGC	5 cut(s)	175, 178, 499, 527, 661
BstV2I	GAAGAC	2 cut(s)	263, 437
BstX2I	RGATCY	1 cut(s)	340
BstXI	CCANNNNNNTGG	1 cut(s)	866
BstYI	RGATCY	1 cut(s)	340
BsuI	GTATCC	2 cut(s)	540, 1184
BsuRI	GGCC	5 cut(s)	200, 408, 711, 870, 1376
BtgI	CCRYGG	1 cut(s)	195
BtgZI	GCGATG	1 cut(s)	737
BtsCI	GGATG	6 cut(s)	484, 556, 670, 940, 1054, 1169
BtsIMutI	CAGTG	2 cut(s)	477, 555
BveI	ACCTGC	1 cut(s)	718
Cac8I	GCNNGC	1 cut(s)	122
CfoI	GCGC	1 cut(s)	1510
Cfr13I	GGNCC	4 cut(s)	347, 406, 836, 1167
CpoI	CGGWCCG	1 cut(s)	347
CseI	GACGC	2 cut(s)	408, 795
Csp6I	GTAC	5 cut(s)	352, 714, 774, 1028, 1063
CspI	CGGWCCG	1 cut(s)	347
CviQI	GTAC	5 cut(s)	352, 714, 774, 1028, 1063
DdeI	CTNAG	4 cut(s)	95, 815, 1290, 1504
DpnI	GATC	5 cut(s)	269, 342, 1021, 1308, 1319
DpnII	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
DrdI	GACNNNNNNGTC	1 cut(s)	825
DseDI	GACNNNNNNGTC	1 cut(s)	825
EaeI	YGGCCR	3 cut(s)	198, 868, 1374
Eam1104I	CTCTTC	1 cut(s)	1243
EarI	CTCTTC	1 cut(s)	1243
Ecl136II	GAGCTC	1 cut(s)	70
Eco130I	CCWWGG	2 cut(s)	195, 1212
Eco24I	GRGCYC	1 cut(s)	72
Eco47I	GGWCC	3 cut(s)	347, 836, 1167
Eco53kI	GAGCTC	1 cut(s)	70
Eco57I	CTGAAG	2 cut(s)	264, 1439
Eco88I	CYCGRG	2 cut(s)	71, 1334
Eco91I	GGTNACC	1 cut(s)	1097
EcoICRI	GAGCTC	1 cut(s)	70
EcoNI	CCTNNNNNAGG	1 cut(s)	1188
EcoO109I	RGGNCCY	1 cut(s)	836
EcoO65I	GGTNACC	1 cut(s)	1097
EcoRII	CCWGG	1 cut(s)	1183
EcoT14I	CCWWGG	2 cut(s)	195, 1212
EcoT38I	GRGCYC	1 cut(s)	72
ErhI	CCWWGG	2 cut(s)	195, 1212
Esp3I	CGTCTC	3 cut(s)	813, 847, 1286
FaqI	GGGAC	2 cut(s)	849, 929
FauI	CCCGC	1 cut(s)	468
FauNDI	CATATG	1 cut(s)	384
FblI	GTMKAC	1 cut(s)	423
Fnu4HI	GCNGC	5 cut(s)	189, 192, 513, 516, 650
FokI	GGATG	6 cut(s)	491, 563, 677, 947, 1061, 1176
FriOI	GRGCYC	1 cut(s)	72
Fsp4HI	GCNGC	5 cut(s)	189, 192, 513, 516, 650
FspBI	CTAG	1 cut(s)	1539
GlaI	GCGC	1 cut(s)	1509
GluI	GCNGC	5 cut(s)	189, 192, 513, 516, 650
GsaI	CCCAGC	2 cut(s)	891, 1013
HaeIII	GGCC	5 cut(s)	200, 408, 711, 870, 1376
HapII	CCGG	3 cut(s)	547, 956, 1286
HgaI	GACGC	2 cut(s)	408, 795
HhaI	GCGC	1 cut(s)	1510
Hin6I	GCGC	1 cut(s)	1508
HinP1I	GCGC	1 cut(s)	1508
HincII	GTYRAC	1 cut(s)	146
HindII	GTYRAC	1 cut(s)	146
HindIII	AAGCTT	1 cut(s)	908
HinfI	GANTC	6 cut(s)	278, 316, 1054, 1078, 1180, 1495
HpaII	CCGG	3 cut(s)	547, 956, 1286
HphI	GGTGA	3 cut(s)	358, 689, 742
Hpy166II	GTNNAC	6 cut(s)	146, 354, 398, 424, 733, 1264
Hpy188I	TCNGA	4 cut(s)	52, 347, 987, 1059
Hpy188III	TCNNGA	7 cut(s)	73, 158, 290, 607, 662, 1036, 1177
Hpy8I	GTNNAC	6 cut(s)	146, 354, 398, 424, 733, 1264
HpyAV	CCTTC	4 cut(s)	133, 239, 982, 1399
HpyCH4III	ACNGT	3 cut(s)	351, 472, 778
HpyCH4IV	ACGT	2 cut(s)	971, 1235
HpyF10VI	GCNNNNNNNGC	2 cut(s)	188, 197
HpyF3I	CTNAG	4 cut(s)	95, 815, 1290, 1504
HpySE526I	ACGT	2 cut(s)	971, 1235
HspAI	GCGC	1 cut(s)	1508
KflI	GGGWCCC	1 cut(s)	836
Kzo9I	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
LmnI	GCTCC	3 cut(s)	948, 1287, 1570
Lsp1109I	GCAGC	5 cut(s)	175, 178, 499, 527, 661
LweI	GCATC	4 cut(s)	638, 709, 714, 1578
MaeI	CTAG	1 cut(s)	1539
MaeII	ACGT	2 cut(s)	971, 1235
MaeIII	GTNAC	4 cut(s)	667, 692, 827, 1097
MalI	GATC	5 cut(s)	269, 342, 1021, 1308, 1319
MbiI	CCGCTC	1 cut(s)	943
MboI	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
MboII	GAAGA	9 cut(s)	173, 268, 442, 1145, 1260, 1354, 1432, 1435, 1538
MfeI	CAATTG	2 cut(s)	282, 390
MflI	RGATCY	1 cut(s)	340
MhlI	GDGCHC	3 cut(s)	72, 1155, 1266
MlsI	TGGCCA	1 cut(s)	870
MluNI	TGGCCA	1 cut(s)	870
MlyI	GAGTC	1 cut(s)	1504
MmeI	TCCRAC	2 cut(s)	75, 954
Mox20I	TGGCCA	1 cut(s)	870
MscI	TGGCCA	1 cut(s)	870
MseI	TTAA	7 cut(s)	447, 572, 593, 906, 1092, 1413, 1478
MslI	CAYNNNNRTG	1 cut(s)	864
Msp20I	TGGCCA	1 cut(s)	870
MspA1I	CMGCKG	2 cut(s)	887, 1009
MspI	CCGG	3 cut(s)	547, 956, 1286
MspR9I	CCNGG	4 cut(s)	548, 957, 1185, 1286
MunI	CAATTG	2 cut(s)	282, 390
Mva1269I	GAATGC	1 cut(s)	854
MvaI	CCWGG	1 cut(s)	1185
MwoI	GCNNNNNNNGC	2 cut(s)	188, 197
NciI	CCSGG	3 cut(s)	548, 957, 1286
NcoI	CCATGG	1 cut(s)	195
NdeI	CATATG	1 cut(s)	384
NdeII	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
NlaIV	GGNNCC	4 cut(s)	837, 838, 1197, 1572
NmeAIII	GCCGAG	4 cut(s)	226, 824, 1402, 1473
NmuCI	GTSAC	2 cut(s)	667, 827
PaeR7I	CTCGAG	1 cut(s)	71
PaqCI	CACCTGC	1 cut(s)	718
PcsI	WCGNNNNNNNCGW	1 cut(s)	48
PctI	GAATGC	1 cut(s)	854
PfeI	GAWTC	5 cut(s)	278, 316, 1054, 1078, 1180
PflMI	CCANNNNNTGG	1 cut(s)	877
PkrI	GCNGC	5 cut(s)	190, 193, 514, 517, 651
PleI	GAGTC	1 cut(s)	1503
PpsI	GAGTC	1 cut(s)	1503
PpuMI	RGGWCCY	1 cut(s)	836
PsiI	TTATAA	1 cut(s)	543
Psp124BI	GAGCTC	1 cut(s)	72
Psp5II	RGGWCCY	1 cut(s)	836
Psp6I	CCWGG	1 cut(s)	1183
PspEI	GGTNACC	1 cut(s)	1097
PspFI	CCCAGC	2 cut(s)	887, 1009
PspGI	CCWGG	1 cut(s)	1183
PspN4I	GGNNCC	4 cut(s)	837, 838, 1197, 1572
PspPI	GGNCC	4 cut(s)	347, 406, 836, 1167
PspPPI	RGGWCCY	1 cut(s)	836
PstI	CTGCAG	1 cut(s)	517
PsuI	RGATCY	1 cut(s)	340
PvuII	CAGCTG	2 cut(s)	887, 1009
RsaI	GTAC	5 cut(s)	353, 715, 775, 1029, 1064
RsaNI	GTAC	5 cut(s)	352, 714, 774, 1028, 1063
RseI	CAYNNNNRTG	1 cut(s)	864
Rsr2I	CGGWCCG	1 cut(s)	347
RsrII	CGGWCCG	1 cut(s)	347
SacI	GAGCTC	1 cut(s)	72
SaqAI	TTAA	7 cut(s)	447, 572, 593, 906, 1092, 1413, 1478
SatI	GCNGC	5 cut(s)	189, 192, 513, 516, 650
Sau3AI	GATC	5 cut(s)	267, 340, 1019, 1306, 1317
Sau96I	GGNCC	4 cut(s)	347, 406, 836, 1167
SchI	GAGTC	1 cut(s)	1504
ScrFI	CCNGG	4 cut(s)	548, 957, 1185, 1286
SduI	GDGCHC	3 cut(s)	72, 1155, 1266
SfaNI	GCATC	4 cut(s)	638, 709, 714, 1578
SfcI	CTRYAG	1 cut(s)	513
Sfr274I	CTCGAG	1 cut(s)	71
SinI	GGWCC	3 cut(s)	347, 836, 1167
SlaI	CTCGAG	1 cut(s)	71
SmiMI	CAYNNNNRTG	1 cut(s)	864
SmlI	CTYRAG	5 cut(s)	71, 310, 370, 919, 1036
SmoI	CTYRAG	5 cut(s)	71, 310, 370, 919, 1036
SsiI	CCGC	4 cut(s)	475, 941, 1591, 1600
SspMI	CTAG	1 cut(s)	1539
SstI	GAGCTC	1 cut(s)	72
StyD4I	CCNGG	4 cut(s)	546, 955, 1183, 1284
StyI	CCWWGG	2 cut(s)	195, 1212
TaaI	ACNGT	3 cut(s)	351, 472, 778
TaiI	ACGT	2 cut(s)	974, 1238
TaqI	TCGA	3 cut(s)	72, 157, 1123
TatI	WGTACW	2 cut(s)	1027, 1062
TfiI	GAWTC	5 cut(s)	278, 316, 1054, 1078, 1180
Tru1I	TTAA	7 cut(s)	447, 572, 593, 906, 1092, 1413, 1478
Tru9I	TTAA	7 cut(s)	447, 572, 593, 906, 1092, 1413, 1478
TscAI	CASTG	2 cut(s)	477, 562
TseFI	GTSAC	2 cut(s)	667, 827
TseI	GCWGC	5 cut(s)	188, 191, 512, 515, 649
Tsp45I	GTSAC	2 cut(s)	667, 827
TspDTI	ATGAA	8 cut(s)	98, 443, 554, 644, 951, 1091, 1146, 1532
TspRI	CASTG	2 cut(s)	477, 562
Van91I	CCANNNNNTGG	1 cut(s)	877
VneI	GTGCAC	1 cut(s)	1262
VpaK11BI	GGWCC	3 cut(s)	347, 836, 1167
XagI	CCTNNNNNAGG	1 cut(s)	1188
XapI	RAATTY	2 cut(s)	452, 1562
XcmI	CCANNNNNNNNNTGG	1 cut(s)	389
XhoI	CTCGAG	1 cut(s)	71
XmiI	GTMKAC	1 cut(s)	423
XspI	CTAG	1 cut(s)	1539

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.