Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0003161

Physical Location & Seq

Genomic Coordinates Forward (+)

30488088 .. 30494046

Gene Structure 5959 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG140100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGGGGTGAAGGGTGTGAACCAAGGCCATGGGGCTGTTGTGCCTCCAACAGAACAGAAGCTCTCGGATGAGATGGATGTTACGAAGAAGAAGTATCTTAGAGGTGGAGAAGCTAATTTCGAGGTATTGAAAGATAAAAAGTTGAAGGGTCAGCTAGCTGTTAGAGAAGCATTACATCTGAAGACAGCACAAGCTGCTGCCAACGCTGAGAAGTACCTTCTGCCAAGTGAAGAAGGTTATTTGGAGCCTGAAGGCTTAGAGAAGACATGGAGGATCAAACAAGACTCAATAGCCCCTGCAGTAGATATCTTAAGCGCAAGGAATCAATACGATATTGTTGTCCCAGATCTCGGTCCATACAGGCTGGATTTCACGCCAAGTGGTCGATACATGATGGTCGGTGGACACAAGGGCCATCTAGCTATTGTAGACATGAAGCAAATGAGCCTGATCAAAGAATTTCAGGTTAGGGAGACAGTTCGTGATGTGGTATTCTTGCATGATGAAACGATGTTTGCTGCAGCCCAGAAAAAGTACCCATATATTTATAATCGGGATGGCACTGAACTTCACTGCTTAAAGGAACATGGTGCAGCTTTAAGGCTTCGTTATCTTGAACAACACCGACTATTGGCATCAATAAATGAATATGGTCAGCTTCATTATCAGGATGTAACAGATGGTCGGATGATAGGTAGTTACAGGACAGGCTTTGGTCGTACTGATGTGATGCAGGTAAACCGCCACAATGCACTTCTTGCTTTGGGTCATTCAGGTGGTAAAGTTACCATGTGGAGTCCTACAAGCTCTTCTGCTGTTATTGAGATGCTGTGCCACAAGGGCCCCATCTCGGCCATAGCTTTCCACCCTACTAATCGTGATCTCATGGCCACATCTGGGAAAGAGAAAAAAGTTAAGCTTTGGGACATGAGGAATCTTAAGGGGCCACTCCAAATGTTACCAGGTCAGGCAGAGACTCTGGATTTCAGTCAAAAGGGTCTGCTTGCTCGTGGAACTGGATCTTTTCTACAGGTTCTGAGAGATTCTTCTGGGACTCAGAAGTACGAGAAATATATGACTCATCCATTAGTTAAAGGTTACCAAATAGAAAAGGTGTTGTTTCGACCATATGAAGATGTTTTATGCATAGGACACTCCATGGGGTGGTCTAGTATTCTGATTCCTGGTTCTGGGAACCCCAATTTTGATACATGGGTGGCGAATCCATTTGAAACACCTAAACAGAGAAGAGAGAGGGAAGTGCACTCTCTACTTGATAAGCTCCCACCTGAGACAATTATGTTTGATCCCACAAAGATTGGCACAGTGAAACCTCCAAGGAAAGAGAAGCCAACAAAGGAGGAGAAAGAGGCTGAGCTGGAAGCCGCTCTTGAAGTTGCCAAGGACATTGTCCCGAAGAAGAAAACAAAGGGGAGGAGTAAGCCAAGTAAGATGAAGAAGAAGAAGCAGGAGATAATTGCCAATGCCAAGAGACCTTTCTTGGAACAACAAATGAAAGAGGATGAACAAATGGCTAGAAAGAAGCAGAAAGGAATGGAGCAAGTGGAGCTACCAACATCTTTGCAGCGGTTTGCTCGCAAGAAAGTGACTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005732 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0032040 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0044085 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BING4CT WD40

Protein Analysis

538

Amino Acids

60.88

Weight (kDa)

9.5

Isoelectric Point (pI)

32.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_Prp19	PF24814	122 - 334	6.5e-14	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	122 - 232	6.8e-06	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5	PF25175	122 - 313	4.7e-09	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	170 - 388	1.3e-11	CDC20/Fizzy WD40 domain
Beta-prop_THOC3	PF25174	185 - 381	3.7e-12	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	225 - 315	1.5e-08	WDR3 first beta-propeller domain
BING4CT	PF08149	357 - 436	2.6e-33	BING4CT (NUC141) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003161)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10530
fragaria_vesca	FvH4_7g06900 FvH4_7g06900
malus_domestica	MD07G1075700.v1.1 MD13G1165600.v1.1
prunus_persica	Prupe.2G096600_v2.0.a1 Prupe.2G096600_v2.0.a1
pyrus_communis	pycom02g20600 pycom07g05980 pycom13g14170
rosa_chinensis	RchiOBHm_Chr1g0336741 RchiOBHm_Chr1g0336801 RchiOBHm_Chr1g0336811 RchiOBHm_Chr1g0336821
rosa_laevigata	RLG00000029332 RLG00000029335 RLG00000029337
rosa_multiflora	Rmu_sc0000907.1_g000012 Rmu_sc0000907.1_g000017 Rmu_sc0000907.1_g000032 Rmu_sc0000907.1_g000033 Rmu_sc0011778.1_g000010
rosa_roxburghii	Rroxscaffold_4G00315350
rosa_rugosa	Rorug01G0127500 Rorug01G0127800 Rorug01G0127900
rosa_samantha	Rh1AG148700 Rh1AG148900 Rh1BG116800 Rh1BG116900 Rh1CG140100 Rh1DG155500 Rh1DG156000 Rh1DG156100 Rh5AG191600
rosa_wichuraiana	Rw1G012000 Rw1G012010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	549
Acc36I	ACCTGC	1 cut(s)	724
AccB7I	CCANNNNNTGG	1 cut(s)	1164
AccBSI	CCGCTC	1 cut(s)	1388
AccI	GTMKAC	1 cut(s)	429
AciI	CCGC	3 cut(s)	742, 1386, 1588
AclWI	GGATC	3 cut(s)	281, 1027, 1301
AcoI	YGGCCR	2 cut(s)	852, 888
AcsI	RAATTY	1 cut(s)	458
AcuI	CTGAAG	2 cut(s)	200, 270
AfaI	GTAC	4 cut(s)	215, 536, 721, 1064
AfiI	CCNNNNNNNGG	6 cut(s)	350, 631, 850, 897, 1164, 1190
AflII	CTTAAG	2 cut(s)	310, 938
AgsI	TTSAA	5 cut(s)	130, 145, 617, 1232, 1394
AjnI	CCWGG	2 cut(s)	961, 1183
AjuI	GAANNNNNNNTTGG	2 cut(s)	1481, 1513
Alw21I	GWGCWC	1 cut(s)	1266
Alw26I	GTCTC	4 cut(s)	467, 968, 1286, 1486
Alw44I	GTGCAC	1 cut(s)	1262
AlwI	GGATC	3 cut(s)	281, 1027, 1301
AlwNI	CAGNNNCTG	1 cut(s)	1036
AoxI	GGCC	6 cut(s)	25, 412, 841, 852, 888, 944
ApaI	GGGCCC	1 cut(s)	845
ApaLI	GTGCAC	1 cut(s)	1262
ApeKI	GCWGC	6 cut(s)	194, 197, 518, 521, 593, 1585
ApoI	RAATTY	1 cut(s)	458
AspLEI	GCGC	1 cut(s)	317
AspS9I	GGNCC	5 cut(s)	353, 412, 841, 842, 944
AsuHPI	GGTGA	1 cut(s)	19
AsuNHI	GCTAGC	1 cut(s)	154
AvaII	GGWCC	1 cut(s)	353
BaeGI	GKGCMC	2 cut(s)	845, 1266
BaeI	ACNNNNGTAYC	2 cut(s)	1200, 1233
BalI	TGGCCA	1 cut(s)	890
BanII	GRGCYC	1 cut(s)	845
BauI	CACGAG	1 cut(s)	1008
BbsI	GAAGAC	2 cut(s)	188, 269
Bbv12I	GWGCWC	1 cut(s)	1266
BbvI	GCAGC	6 cut(s)	181, 184, 505, 533, 605, 1597
BccI	CCATC	6 cut(s)	67, 388, 423, 551, 674, 854
BciT130I	CCWGG	2 cut(s)	963, 1185
BclI	TGATCA	1 cut(s)	450
BcoDI	GTCTC	4 cut(s)	467, 968, 1286, 1486
BfaI	CTAG	4 cut(s)	155, 419, 1170, 1536
BfmI	CTRYAG	3 cut(s)	297, 519, 1028
BfrI	CTTAAG	2 cut(s)	310, 938
BfuAI	ACCTGC	1 cut(s)	724
BglI	GCCNNNNNGGC	1 cut(s)	840
BglII	AGATCT	1 cut(s)	346
BisI	GCNGC	7 cut(s)	195, 198, 519, 522, 594, 1386, 1586
BlpI	GCTNAGC	1 cut(s)	1374
BlsI	GCNGC	7 cut(s)	196, 199, 520, 523, 595, 1387, 1587
Bme1390I	CCNGG	2 cut(s)	963, 1185
Bme18I	GGWCC	1 cut(s)	353
BmgT120I	GGNCC	5 cut(s)	353, 412, 841, 842, 944
BmiI	GGNNCC	5 cut(s)	246, 843, 844, 945, 1196
BmrFI	CCNGG	2 cut(s)	963, 1185
BmsI	GCATC	3 cut(s)	644, 720, 816
BmtI	GCTAGC	1 cut(s)	158
BpiI	GAAGAC	2 cut(s)	188, 269
Bpu1102I	GCTNAGC	1 cut(s)	1374
BsaI	GGTCTC	1 cut(s)	1486
BsaJI	CCNNGG	5 cut(s)	22, 28, 1158, 1337, 1401
Bsc4I	CCNNNNNNNGG	6 cut(s)	350, 631, 850, 897, 1164, 1190
Bse1I	ACTGG	1 cut(s)	1021
BseBI	CCWGG	2 cut(s)	963, 1185
BseDI	CCNNGG	5 cut(s)	22, 28, 1158, 1337, 1401
BseGI	GGATG	7 cut(s)	73, 82, 562, 676, 693, 1081, 1528
BseLI	CCNNNNNNNGG	6 cut(s)	350, 631, 850, 897, 1164, 1190
BseMII	CTCAG	5 cut(s)	198, 1028, 1070, 1281, 1365
BseNI	ACTGG	1 cut(s)	1021
BseRI	GAGGAG	2 cut(s)	1376, 1450
BseSI	GKGCMC	2 cut(s)	845, 1266
BseXI	GCAGC	6 cut(s)	181, 184, 505, 533, 605, 1597
BsgI	GTGCAG	1 cut(s)	612
BshFI	GGCC	6 cut(s)	27, 414, 843, 854, 890, 946
BsiHKAI	GWGCWC	1 cut(s)	1266
BslFI	GGGAC	4 cut(s)	326, 938, 1066, 1397
BslI	CCNNNNNNNGG	6 cut(s)	350, 631, 850, 897, 1164, 1190
BsmAI	GTCTC	4 cut(s)	467, 968, 1286, 1486
BsmFI	GGGAC	4 cut(s)	326, 938, 1066, 1397
BsnI	GGCC	6 cut(s)	27, 414, 843, 854, 890, 946
Bso31I	GGTCTC	1 cut(s)	1486
Bsp120I	GGGCCC	1 cut(s)	841
Bsp1286I	GDGCHC	2 cut(s)	845, 1266
Bsp143I	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
Bsp1720I	GCTNAGC	1 cut(s)	1374
Bsp19I	CCATGG	2 cut(s)	28, 1158
BspACI	CCGC	3 cut(s)	742, 1386, 1588
BspANI	GGCC	6 cut(s)	27, 414, 843, 854, 890, 946
BspCNI	CTCAG	5 cut(s)	199, 1029, 1069, 1282, 1366
BspLI	GGNNCC	5 cut(s)	246, 843, 844, 945, 1196
BspMAI	CTGCAG	2 cut(s)	301, 523
BspMI	ACCTGC	1 cut(s)	724
BspOI	GCTAGC	1 cut(s)	158
BspPI	GGATC	3 cut(s)	281, 1027, 1301
BspQI	GCTCTTC	1 cut(s)	814
BspTI	CTTAAG	2 cut(s)	310, 938
BspTNI	GGTCTC	1 cut(s)	1486
BsrBI	CCGCTC	1 cut(s)	1388
BsrI	ACTGG	1 cut(s)	1021
BssECI	CCNNGG	5 cut(s)	22, 28, 1158, 1337, 1401
BssMI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
BssSI	CACGAG	1 cut(s)	1008
BssT1I	CCWWGG	5 cut(s)	22, 28, 1158, 1337, 1401
Bst2BI	CACGAG	1 cut(s)	1008
Bst2UI	CCWGG	2 cut(s)	963, 1185
Bst4CI	ACNGT	2 cut(s)	478, 1327
Bst6I	CTCTTC	2 cut(s)	814, 1243
BstAFI	CTTAAG	2 cut(s)	310, 938
BstAPI	GCANNNNNTGC	2 cut(s)	194, 758
BstC8I	GCNNGC	3 cut(s)	156, 1005, 1597
BstDEI	CTNAG	7 cut(s)	98, 207, 256, 1037, 1056, 1290, 1374
BstDSI	CCRYGG	2 cut(s)	28, 1158
BstEII	GGTNACC	1 cut(s)	1097
BstF5I	GGATG	7 cut(s)	73, 82, 562, 676, 693, 1081, 1528
BstHHI	GCGC	1 cut(s)	317
BstKTI	GATC	6 cut(s)	276, 349, 453, 883, 1022, 1309
BstMAI	GTCTC	4 cut(s)	467, 968, 1286, 1486
BstMBI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
BstMWI	GCNNNNNNNGC	5 cut(s)	194, 203, 758, 840, 1567
BstNI	CCWGG	2 cut(s)	963, 1185
BstPI	GGTNACC	1 cut(s)	1097
BstSCI	CCNGG	2 cut(s)	961, 1183
BstSFI	CTRYAG	3 cut(s)	297, 519, 1028
BstSLI	GKGCMC	2 cut(s)	845, 1266
BstV1I	GCAGC	6 cut(s)	181, 184, 505, 533, 605, 1597
BstV2I	GAAGAC	2 cut(s)	188, 269
BstX2I	RGATCY	2 cut(s)	346, 1019
BstXI	CCANNNNNNTGG	1 cut(s)	29
BstYI	RGATCY	2 cut(s)	346, 1019
BsuRI	GGCC	6 cut(s)	27, 414, 843, 854, 890, 946
BtgI	CCRYGG	2 cut(s)	28, 1158
BtsCI	GGATG	7 cut(s)	73, 82, 562, 676, 693, 1081, 1528
BtsI	GCAGTG	1 cut(s)	571
BtsIMutI	CAGTG	3 cut(s)	561, 571, 1332
BveI	ACCTGC	1 cut(s)	724
Cac8I	GCNNGC	3 cut(s)	156, 1005, 1597
CaiI	CAGNNNCTG	1 cut(s)	1036
CfoI	GCGC	1 cut(s)	317
Cfr13I	GGNCC	5 cut(s)	353, 412, 841, 842, 944
CsiI	ACCWGGT	1 cut(s)	961
Csp6I	GTAC	4 cut(s)	214, 535, 720, 1063
CspCI	CAANNNNNGTGG	2 cut(s)	1300, 1335
CviQI	GTAC	4 cut(s)	214, 535, 720, 1063
DdeI	CTNAG	7 cut(s)	98, 207, 256, 1037, 1056, 1290, 1374
DpnI	GATC	6 cut(s)	275, 348, 452, 882, 1021, 1308
DpnII	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
EaeI	YGGCCR	2 cut(s)	852, 888
Eam1104I	CTCTTC	2 cut(s)	814, 1243
EarI	CTCTTC	2 cut(s)	814, 1243
Eco130I	CCWWGG	5 cut(s)	22, 28, 1158, 1337, 1401
Eco24I	GRGCYC	1 cut(s)	845
Eco31I	GGTCTC	1 cut(s)	1486
Eco32I	GATATC	1 cut(s)	307
Eco47I	GGWCC	1 cut(s)	353
Eco57I	CTGAAG	2 cut(s)	200, 270
Eco91I	GGTNACC	1 cut(s)	1097
EcoO109I	RGGNCCY	2 cut(s)	841, 842
EcoO65I	GGTNACC	1 cut(s)	1097
EcoRII	CCWGG	2 cut(s)	961, 1183
EcoRV	GATATC	1 cut(s)	307
EcoT14I	CCWWGG	5 cut(s)	22, 28, 1158, 1337, 1401
EcoT22I	ATGCAT	1 cut(s)	1148
EcoT38I	GRGCYC	1 cut(s)	845
ErhI	CCWWGG	5 cut(s)	22, 28, 1158, 1337, 1401
FalI	AAGNNNNNCTT	4 cut(s)	903, 935, 1374, 1406
FaqI	GGGAC	4 cut(s)	326, 938, 1066, 1397
FauNDI	CATATG	1 cut(s)	1129
FbaI	TGATCA	1 cut(s)	450
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	7 cut(s)	195, 198, 519, 522, 594, 1386, 1586
FokI	GGATG	7 cut(s)	80, 89, 569, 683, 700, 1068, 1535
FriOI	GRGCYC	1 cut(s)	845
Fsp4HI	GCNGC	7 cut(s)	195, 198, 519, 522, 594, 1386, 1586
FspBI	CTAG	4 cut(s)	155, 419, 1170, 1536
GlaI	GCGC	1 cut(s)	316
GluI	GCNGC	7 cut(s)	195, 198, 519, 522, 594, 1386, 1586
HaeIII	GGCC	6 cut(s)	27, 414, 843, 854, 890, 946
HhaI	GCGC	1 cut(s)	317
Hin6I	GCGC	1 cut(s)	315
HinP1I	GCGC	1 cut(s)	315
HindIII	AAGCTT	1 cut(s)	917
HphI	GGTGA	1 cut(s)	19
Hpy166II	GTNNAC	5 cut(s)	19, 404, 430, 739, 1264
Hpy188I	TCNGA	6 cut(s)	67, 180, 687, 1038, 1059, 1179
Hpy188III	TCNNGA	8 cut(s)	482, 554, 614, 668, 878, 980, 1391, 1414
Hpy8I	GTNNAC	5 cut(s)	19, 404, 430, 739, 1264
HpyAV	CCTTC	5 cut(s)	4, 139, 227, 227, 245
HpyCH4III	ACNGT	2 cut(s)	478, 1327
HpyCH4V	TGCA	9 cut(s)	299, 499, 521, 593, 733, 752, 1146, 1264, 1585
HpyF10VI	GCNNNNNNNGC	5 cut(s)	194, 203, 758, 840, 1567
HpyF3I	CTNAG	7 cut(s)	98, 207, 256, 1037, 1056, 1290, 1374
HspAI	GCGC	1 cut(s)	315
Ksp22I	TGATCA	1 cut(s)	450
Kzo9I	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
LguI	GCTCTTC	1 cut(s)	814
LmnI	GCTCC	4 cut(s)	244, 1287, 1558, 1567
Lsp1109I	GCAGC	6 cut(s)	181, 184, 505, 533, 605, 1597
LweI	GCATC	3 cut(s)	644, 720, 816
MabI	ACCWGGT	1 cut(s)	961
MaeI	CTAG	4 cut(s)	155, 419, 1170, 1536
MaeIII	GTNAC	7 cut(s)	79, 673, 698, 784, 957, 1097, 1606
MalI	GATC	6 cut(s)	275, 348, 452, 882, 1021, 1308
MbiI	CCGCTC	1 cut(s)	1388
MboI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
MflI	RGATCY	2 cut(s)	346, 1019
MhlI	GDGCHC	2 cut(s)	845, 1266
MlsI	TGGCCA	1 cut(s)	890
MluCI	AATT	5 cut(s)	115, 458, 1201, 1296, 1476
MluNI	TGGCCA	1 cut(s)	890
MlyI	GAGTC	5 cut(s)	278, 805, 970, 1048, 1072
MmeI	TCCRAC	2 cut(s)	71, 665
Mox20I	TGGCCA	1 cut(s)	890
Mph1103I	ATGCAT	1 cut(s)	1148
MscI	TGGCCA	1 cut(s)	890
MseI	TTAA	6 cut(s)	311, 578, 599, 915, 939, 1092
MslI	CAYNNNNRTG	1 cut(s)	774
Msp20I	TGGCCA	1 cut(s)	890
MspA1I	CMGCKG	1 cut(s)	1588
MspCI	CTTAAG	2 cut(s)	310, 938
MspR9I	CCNGG	2 cut(s)	963, 1185
MvaI	CCWGG	2 cut(s)	963, 1185
MwoI	GCNNNNNNNGC	5 cut(s)	194, 203, 758, 840, 1567
NcoI	CCATGG	2 cut(s)	28, 1158
NdeI	CATATG	1 cut(s)	1129
NdeII	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
NheI	GCTAGC	1 cut(s)	154
NlaIV	GGNNCC	5 cut(s)	246, 843, 844, 945, 1196
NmeAIII	GCCGAG	1 cut(s)	830
NmuCI	GTSAC	1 cut(s)	1606
NsiI	ATGCAT	1 cut(s)	1148
PciSI	GCTCTTC	1 cut(s)	814
PfeI	GAWTC	5 cut(s)	322, 934, 1043, 1180, 1222
PflFI	GACNNNGTC	1 cut(s)	1409
PflMI	CCANNNNNTGG	1 cut(s)	1164
PkrI	GCNGC	7 cut(s)	196, 199, 520, 523, 595, 1387, 1587
PleI	GAGTC	5 cut(s)	278, 804, 970, 1048, 1072
PpsI	GAGTC	5 cut(s)	278, 804, 970, 1048, 1072
PsiI	TTATAA	1 cut(s)	549
Psp6I	CCWGG	2 cut(s)	961, 1183
PspEI	GGTNACC	1 cut(s)	1097
PspGI	CCWGG	2 cut(s)	961, 1183
PspN4I	GGNNCC	5 cut(s)	246, 843, 844, 945, 1196
PspOMI	GGGCCC	1 cut(s)	841
PspPI	GGNCC	5 cut(s)	353, 412, 841, 842, 944
PstI	CTGCAG	2 cut(s)	301, 523
PstNI	CAGNNNCTG	1 cut(s)	1036
PsuI	RGATCY	2 cut(s)	346, 1019
PsyI	GACNNNGTC	1 cut(s)	1409
RsaI	GTAC	4 cut(s)	215, 536, 721, 1064
RsaNI	GTAC	4 cut(s)	214, 535, 720, 1063
RseI	CAYNNNNRTG	1 cut(s)	774
SapI	GCTCTTC	1 cut(s)	814
SaqAI	TTAA	6 cut(s)	311, 578, 599, 915, 939, 1092
SatI	GCNGC	7 cut(s)	195, 198, 519, 522, 594, 1386, 1586
Sau3AI	GATC	6 cut(s)	273, 346, 450, 880, 1019, 1306
Sau96I	GGNCC	5 cut(s)	353, 412, 841, 842, 944
SchI	GAGTC	5 cut(s)	278, 805, 970, 1048, 1072
ScrFI	CCNGG	2 cut(s)	963, 1185
SduI	GDGCHC	2 cut(s)	845, 1266
SexAI	ACCWGGT	1 cut(s)	961
SfaNI	GCATC	3 cut(s)	644, 720, 816
SfcI	CTRYAG	3 cut(s)	297, 519, 1028
SinI	GGWCC	1 cut(s)	353
SmiMI	CAYNNNNRTG	1 cut(s)	774
SmlI	CTYRAG	2 cut(s)	310, 938
SmoI	CTYRAG	2 cut(s)	310, 938
Sse9I	AATT	5 cut(s)	115, 458, 1201, 1296, 1476
SsiI	CCGC	3 cut(s)	742, 1386, 1588
SspMI	CTAG	4 cut(s)	155, 419, 1170, 1536
StyD4I	CCNGG	2 cut(s)	961, 1183
StyI	CCWWGG	5 cut(s)	22, 28, 1158, 1337, 1401
TaaI	ACNGT	2 cut(s)	478, 1327
TaqI	TCGA	3 cut(s)	120, 385, 1123
TaqII	GACCGA	1 cut(s)	341
TasI	AATT	5 cut(s)	115, 458, 1201, 1296, 1476
TauI	GCSGC	1 cut(s)	1388
TfiI	GAWTC	5 cut(s)	322, 934, 1043, 1180, 1222
Tru1I	TTAA	6 cut(s)	311, 578, 599, 915, 939, 1092
Tru9I	TTAA	6 cut(s)	311, 578, 599, 915, 939, 1092
TscAI	CASTG	3 cut(s)	568, 578, 1332
TseFI	GTSAC	1 cut(s)	1606
TseI	GCWGC	6 cut(s)	194, 197, 518, 521, 593, 1585
Tsp45I	GTSAC	1 cut(s)	1606
TspDTI	ATGAA	8 cut(s)	449, 519, 650, 660, 1146, 1469, 1529, 1539
TspRI	CASTG	3 cut(s)	568, 578, 1332
Tth111I	GACNNNGTC	1 cut(s)	1409
Van91I	CCANNNNNTGG	1 cut(s)	1164
Vha464I	CTTAAG	2 cut(s)	310, 938
VneI	GTGCAC	1 cut(s)	1262
VpaK11BI	GGWCC	1 cut(s)	353
XapI	RAATTY	1 cut(s)	458
XmiI	GTMKAC	1 cut(s)	429
XspI	CTAG	4 cut(s)	155, 419, 1170, 1536
Zsp2I	ATGCAT	1 cut(s)	1148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.