MD00G1070500.v1.1

Polygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0000702
Physical Location & Seq
Reverse (-)
13717029 .. 13719220
2192 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1070500.v1.1.491

Sequence Viewer

Length: 1197 bp
ATGGCAAACCCCAAAAGCCTCTCGCACCCAGCTGCAGTAGTTCTTGCGTTGATGATGGTGGCTGTAAGTATTACTAGTGTGGATGCTGCAGCCGTCACATTCAGTGTGAGCAGTTTAGGAGCCAAAGCAGATGGCAGGACTGACTCCACACAGGCCTTCCTCTCTGCTTGGGCCAAAGCTTGTGCCTCCGTCAATCCCGCTGTCATCTATGTCCCCGCAGGGAGGTTCTTGCTTCGCAATGCTGTGTTCTCTGGGCCATGCAAGAACAACGCCATCACCTTCCGCATTGCCGGCACCCTCGTGGCCCCGTCTGATTACCGGGTCATTGGAAACGCCGATTACTGGCTTTTCTTTCAGCATGTCAATGGGGTCACCATTTCCGGTGGAGTTCTGGACGGTAAGGGCACCGGCTTGTGGGGTTGCAAGTCCTCAGGCCAGAGTTGCCCCAGCGGAGCAACCACACTGGGTTTTTCCAACTCCAACAACATTGTGGTGAGTGGATTAGTATCACTAAACAGCCAAATGTTCCACATTGTCATCAACGGCTGCCACAATGTGAAAATGCAAGGTGTCAAGGTTATCGCCGCCGGCAACAGCCCCAACACCGATGGCATCCATGTCCAAATGTCATCTGGTGTCACCATTCTCAACTCCAAAATTTCAACCGGTGACGATTGTGTCTCAATTGGCCCCGGCACCACAAATTTGTGGATTGAAAACGTGGCTTGTGGACCCGGCCATGGAATCAGCATTGGGAGTTTAGGGAAGGACCAACAAGAAGCCGGTGTACAAAATGTTACAGTTAAAACAGTTACATTCACTGGTACTCAAAATGGCGTAAGGATCAAGTCTTGGGGGAGACCTAGCACTGGATTTGCTAGGAACATTCTTTTCCAACATGTTGTGATGACCAACGTTCAAAATCCAATCGTTATAGATCAACATTATTGCCCTAACAACAAAGGTTGCCCCGACCAAGTTTCCGGAGTTAAGGTCAGCGACGTGACATATCAAGACATTCATGGTACATCGGCGACGGAAGTGGCAGTGAAATTCGATTGTAGTTCCAAGTATCCTTGCAACAGGATCAGACTGCAAGATGTGAAGCTCACTTACAAGAACCAAGCAGCTGAAGCTTCATGCAGCCATGCAGGCGGAACAACTGCCGGTACAGTTCAGCCTACAAGTTGTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

399

Amino Acids

41.49

Weight (kDa)

8.85

Isoelectric Point (pI)

30.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 34 - 286 9.3e-13 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 61 - 382 2.1e-87 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000702)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43870 AT3G59850 AT3G59850
fragaria_vesca FvH4_1g00290 FvH4_1g00290 FvH4_1g21842 FvH4_1g21850 FvH4_1g21851
malus_domestica MD00G1070500.v1.1 MD00G1087900.v1.1
prunus_persica Prupe.4G261700_v2.0.a1 Prupe.4G261800_v2.0.a1 Prupe.4G261900_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.7G269200_v2.0.a1
pyrus_communis pycom02g00030 pycom03g19680
rosa_chinensis RchiOBHm_Chr2g0084591 RchiOBHm_Chr2g0085391 RchiOBHm_Chr2g0115741 RchiOBHm_Chr2g0115771 RchiOBHm_Chr2g0115801 RchiOBHm_Chr2g0115811 RchiOBHm_Chr2g0115821 RchiOBHm_Chr5g0021021 RchiOBHm_Chr5g0021031
rosa_laevigata RLG00000015683 RLG00000018208 RLG00000018211 RLG00000018212
rosa_multiflora Rmu_co8137638.1_g000001 Rmu_sc0000742.1_g000006 Rmu_sc0004926.1_g000013 Rmu_sc0008355.1_g000010 Rmu_sc0011452.1_g000015 Rmu_ssc0000197.1_g000031 Rmu_ssc0000197.1_g000032 Rmu_ssc0000197.1_g000056
rosa_roxburghii Rroxscaffold_2G00127770 Rroxscaffold_2G00127780 Rroxscaffold_2G00127790 Rroxscaffold_2G00127830 Rroxscaffold_2G00127850 Rroxscaffold_2G00128630 Rroxscaffold_2G00128640 Rroxscaffold_2G00128680 Rroxscaffold_2G00128730 Rroxscaffold_2G00128740
rosa_rugosa Rorug01G0455200 Rorug01G0460100 Rorug02G0199800 Rorug02G0199900
rosa_samantha Rh2BG003000 Rh2BG267500 Rh2BG267700 Rh2BG267800 Rh2BG267900 Rh2CG003400 Rh2CG010000 Rh2CG262800 Rh2CG263200 Rh2CG263300 Rh2CG263400 Rh5CG165700 Rh5CG165800
rosa_wichuraiana Rw0G014320 Rw0G014330 Rw1G010220 Rw2G000800 Rw2G020110 Rw2G020130 Rw2G020150 Rw2G020160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 677
AccB1I GGYRCC 3 cut(s) 293, 404, 695
AccIII TCCGGA 1 cut(s) 983
AciI CCGC 6 cut(s) 198, 216, 283, 450, 585, 1155
AclI AACGTT 1 cut(s) 915
AclWI GGATC 2 cut(s) 851, 1094
AcoI YGGCCR 1 cut(s) 736
AcsI RAATTY 3 cut(s) 657, 703, 1052
AcuI CTGAAG 1 cut(s) 1152
AdeI CACNNNGTG 1 cut(s) 556
AfaI GTAC 4 cut(s) 789, 826, 1027, 1171
AfiI CCNNNNNNNGG 5 cut(s) 222, 342, 414, 740, 869
AflIII ACRYGT 1 cut(s) 898
AgeI ACCGGT 1 cut(s) 665
AgsI TTSAA 3 cut(s) 663, 716, 920
AhlI ACTAGT 1 cut(s) 74
AjiI CACGTC 1 cut(s) 1003
AleI CACNNNNGTG 1 cut(s) 299
AluBI AGCT 5 cut(s) 32, 179, 1108, 1130, 1136
AluI AGCT 5 cut(s) 32, 179, 1108, 1130, 1136
Alw26I GTCTC 2 cut(s) 685, 853
AlwI GGATC 2 cut(s) 851, 1094
Aor13HI TCCGGA 1 cut(s) 983
AoxI GGCC 7 cut(s) 153, 171, 254, 303, 433, 688, 736
ApeKI GCWGC 6 cut(s) 32, 86, 89, 546, 1127, 1143
ApoI RAATTY 3 cut(s) 657, 703, 1052
AsiGI ACCGGT 1 cut(s) 665
AspS9I GGNCC 6 cut(s) 171, 254, 304, 689, 731, 769
AsuC2I CCSGG 3 cut(s) 320, 693, 735
AsuHPI GGTGA 5 cut(s) 268, 364, 505, 631, 680
AvaII GGWCC 2 cut(s) 731, 769
AxyI CCTNAGG 1 cut(s) 430
BaeGI GKGCMC 1 cut(s) 407
BanI GGYRCC 3 cut(s) 293, 404, 695
BarI GAAGNNNNNNTAC 4 cut(s) 771, 803, 1097, 1129
BauI CACGAG 1 cut(s) 299
BbvI GCAGC 6 cut(s) 19, 73, 101, 533, 1139, 1155
BccI CCATC 4 cut(s) 49, 125, 281, 602
BceAI ACGGC 2 cut(s) 77, 559
BciVI GTATCC 1 cut(s) 1083
BcnI CCSGG 3 cut(s) 320, 693, 735
BcoDI GTCTC 2 cut(s) 685, 853
BcuI ACTAGT 1 cut(s) 74
BfaI CTAG 3 cut(s) 75, 864, 879
BfmI CTRYAG 2 cut(s) 33, 87
BfuI GTATCC 1 cut(s) 1083
BglI GCCNNNNNGGC 1 cut(s) 1152
BisI GCNGC 7 cut(s) 33, 87, 90, 547, 585, 1128, 1144
BlsI GCNGC 7 cut(s) 34, 88, 91, 548, 586, 1129, 1145
Bme1390I CCNGG 3 cut(s) 320, 693, 735
Bme18I GGWCC 2 cut(s) 731, 769
BmgBI CACGTC 1 cut(s) 1003
BmgT120I GGNCC 6 cut(s) 171, 254, 304, 689, 731, 769
BmiI GGNNCC 7 cut(s) 121, 295, 306, 406, 691, 697, 733
BmrFI CCNGG 3 cut(s) 320, 693, 735
BmrI ACTGGG 1 cut(s) 473
BmsI GCATC 2 cut(s) 73, 621
BmuI ACTGGG 1 cut(s) 473
BpuMI CCSGG 3 cut(s) 320, 693, 735
BsaBI GATNNNNATC 1 cut(s) 505
BsaI GGTCTC 1 cut(s) 853
BsaJI CCNNGG 2 cut(s) 691, 739
BsaWI WCCGGW 3 cut(s) 380, 665, 983
BsaXI ACNNNNNCTCC 2 cut(s) 978, 1008
Bsc4I CCNNNNNNNGG 5 cut(s) 222, 342, 414, 740, 869
Bse118I RCCGGY 6 cut(s) 290, 407, 587, 665, 782, 1166
Bse1I ACTGG 4 cut(s) 347, 468, 826, 874
Bse21I CCTNAGG 1 cut(s) 430
Bse3DI GCAATG 2 cut(s) 244, 285
Bse8I GATNNNNATC 1 cut(s) 505
BseAI TCCGGA 1 cut(s) 983
BseDI CCNNGG 2 cut(s) 691, 739
BseGI GGATG 2 cut(s) 88, 612
BseJI GATNNNNATC 1 cut(s) 505
BseLI CCNNNNNNNGG 5 cut(s) 222, 342, 414, 740, 869
BseMI GCAATG 2 cut(s) 244, 285
BseMII CTCAG 1 cut(s) 444
BseNI ACTGG 4 cut(s) 347, 468, 826, 874
BseSI GKGCMC 1 cut(s) 407
BseXI GCAGC 6 cut(s) 19, 73, 101, 533, 1139, 1155
BseYI CCCAGC 2 cut(s) 28, 446
BshFI GGCC 7 cut(s) 155, 173, 256, 305, 435, 690, 738
BshNI GGYRCC 3 cut(s) 293, 404, 695
BshTI ACCGGT 1 cut(s) 665
BslFI GGGAC 1 cut(s) 197
BslI CCNNNNNNNGG 5 cut(s) 222, 342, 414, 740, 869
BsmAI GTCTC 2 cut(s) 685, 853
BsmFI GGGAC 1 cut(s) 197
BsnI GGCC 7 cut(s) 155, 173, 256, 305, 435, 690, 738
Bso31I GGTCTC 1 cut(s) 853
Bsp1286I GDGCHC 1 cut(s) 407
Bsp13I TCCGGA 1 cut(s) 983
Bsp1407I TGTACA 1 cut(s) 787
Bsp143I GATC 3 cut(s) 843, 937, 1086
Bsp19I CCATGG 1 cut(s) 739
BspACI CCGC 6 cut(s) 198, 216, 283, 450, 585, 1155
BspANI GGCC 7 cut(s) 155, 173, 256, 305, 435, 690, 738
BspCNI CTCAG 1 cut(s) 443
BspEI TCCGGA 1 cut(s) 983
BspLI GGNNCC 7 cut(s) 121, 295, 306, 406, 691, 697, 733
BspMAI CTGCAG 2 cut(s) 37, 91
BspPI GGATC 2 cut(s) 851, 1094
BspT107I GGYRCC 3 cut(s) 293, 404, 695
BspTNI GGTCTC 1 cut(s) 853
BsrDI GCAATG 2 cut(s) 244, 285
BsrFI RCCGGY 6 cut(s) 290, 407, 587, 665, 782, 1166
BsrGI TGTACA 1 cut(s) 787
BsrI ACTGG 4 cut(s) 347, 468, 826, 874
BssAI RCCGGY 6 cut(s) 290, 407, 587, 665, 782, 1166
BssECI CCNNGG 2 cut(s) 691, 739
BssMI GATC 3 cut(s) 843, 937, 1086
BssSI CACGAG 1 cut(s) 299
BssT1I CCWWGG 1 cut(s) 739
Bst2BI CACGAG 1 cut(s) 299
Bst4CI ACNGT 4 cut(s) 398, 802, 811, 1174
BstAUI TGTACA 1 cut(s) 787
BstC8I GCNNGC 3 cut(s) 292, 589, 1153
BstDEI CTNAG 1 cut(s) 430
BstDSI CCRYGG 1 cut(s) 739
BstEII GGTNACC 1 cut(s) 370
BstF5I GGATG 2 cut(s) 88, 612
BstKTI GATC 3 cut(s) 846, 940, 1089
BstMAI GTCTC 2 cut(s) 685, 853
BstMBI GATC 3 cut(s) 843, 937, 1086
BstMWI GCNNNNNNNGC 4 cut(s) 291, 441, 1133, 1152
BstNSI RCATGY 2 cut(s) 362, 902
BstPI GGTNACC 1 cut(s) 370
BstSCI CCNGG 3 cut(s) 318, 691, 733
BstSFI CTRYAG 2 cut(s) 33, 87
BstSLI GKGCMC 1 cut(s) 407
BstV1I GCAGC 6 cut(s) 19, 73, 101, 533, 1139, 1155
Bsu36I CCTNAGG 1 cut(s) 430
BsuI GTATCC 1 cut(s) 1083
BsuRI GGCC 7 cut(s) 155, 173, 256, 305, 435, 690, 738
BtgI CCRYGG 1 cut(s) 739
BtrI CACGTC 1 cut(s) 1003
BtsCI GGATG 2 cut(s) 88, 612
BtsI GCAGTG 1 cut(s) 1053
BtsIMutI CAGTG 5 cut(s) 109, 461, 819, 867, 1053
Cac8I GCNNGC 3 cut(s) 292, 589, 1153
Cfr10I RCCGGY 6 cut(s) 290, 407, 587, 665, 782, 1166
Cfr13I GGNCC 6 cut(s) 171, 254, 304, 689, 731, 769
Csp6I GTAC 4 cut(s) 788, 825, 1026, 1170
CspAI ACCGGT 1 cut(s) 665
CviAII CATG 8 cut(s) 258, 359, 617, 740, 899, 1022, 1140, 1148
CviQI GTAC 4 cut(s) 788, 825, 1026, 1170
DdeI CTNAG 1 cut(s) 430
DpnI GATC 3 cut(s) 845, 939, 1088
DpnII GATC 3 cut(s) 843, 937, 1086
DraIII CACNNNGTG 1 cut(s) 556
DrdI GACNNNNNNGTC 1 cut(s) 677
DseDI GACNNNNNNGTC 1 cut(s) 677
EaeI YGGCCR 1 cut(s) 736
EciI GGCGGA 1 cut(s) 1170
Eco130I CCWWGG 1 cut(s) 739
Eco147I AGGCCT 1 cut(s) 155
Eco31I GGTCTC 1 cut(s) 853
Eco47I GGWCC 2 cut(s) 731, 769
Eco57I CTGAAG 1 cut(s) 1152
Eco81I CCTNAGG 1 cut(s) 430
Eco91I GGTNACC 1 cut(s) 370
EcoO65I GGTNACC 1 cut(s) 370
EcoT14I CCWWGG 1 cut(s) 739
ErhI CCWWGG 1 cut(s) 739
FaeI CATG 8 cut(s) 261, 362, 620, 743, 902, 1025, 1143, 1151
FaqI GGGAC 1 cut(s) 197
FatI CATG 8 cut(s) 257, 358, 616, 739, 898, 1021, 1139, 1147
FauI CCCGC 2 cut(s) 205, 223
Fnu4HI GCNGC 7 cut(s) 33, 87, 90, 547, 585, 1128, 1144
FokI GGATG 2 cut(s) 95, 599
Fsp4HI GCNGC 7 cut(s) 33, 87, 90, 547, 585, 1128, 1144
FspBI CTAG 3 cut(s) 75, 864, 879
GluI GCNGC 7 cut(s) 33, 87, 90, 547, 585, 1128, 1144
GsaI CCCAGC 2 cut(s) 32, 450
HaeIII GGCC 7 cut(s) 155, 173, 256, 305, 435, 690, 738
Hin1II CATG 8 cut(s) 261, 362, 620, 743, 902, 1025, 1143, 1151
HindIII AAGCTT 2 cut(s) 177, 1134
HinfI GANTC 2 cut(s) 143, 744
HphI GGTGA 5 cut(s) 268, 364, 505, 631, 680
Hpy166II GTNNAC 2 cut(s) 731, 788
Hpy188I TCNGA 2 cut(s) 313, 1091
Hpy188III TCNNGA 3 cut(s) 392, 984, 1013
Hpy8I GTNNAC 2 cut(s) 731, 788
Hpy99I CGWCG 2 cut(s) 1004, 1039
HpyAV CCTTC 3 cut(s) 166, 289, 760
HpyCH4III ACNGT 4 cut(s) 398, 802, 811, 1174
HpyCH4IV ACGT 3 cut(s) 720, 915, 1002
HpyCH4V TGCA 9 cut(s) 35, 89, 261, 423, 565, 1080, 1096, 1143, 1151
HpyF10VI GCNNNNNNNGC 4 cut(s) 291, 441, 1133, 1152
HpyF3I CTNAG 1 cut(s) 430
HpySE526I ACGT 3 cut(s) 720, 915, 1002
Hsp92II CATG 8 cut(s) 261, 362, 620, 743, 902, 1025, 1143, 1151
Kpn2I TCCGGA 1 cut(s) 983
KroI GCCGGC 2 cut(s) 290, 587
KroNI GCCGGC 2 cut(s) 292, 589
Kzo9I GATC 3 cut(s) 843, 937, 1086
LmnI GCTCC 2 cut(s) 119, 452
Lsp1109I GCAGC 6 cut(s) 19, 73, 101, 533, 1139, 1155
LweI GCATC 2 cut(s) 73, 621
MaeI CTAG 3 cut(s) 75, 864, 879
MaeII ACGT 3 cut(s) 720, 915, 1002
MaeIII GTNAC 7 cut(s) 94, 370, 637, 668, 796, 811, 1003
MalI GATC 3 cut(s) 845, 939, 1088
MboI GATC 3 cut(s) 843, 937, 1086
MfeI CAATTG 1 cut(s) 684
MhlI GDGCHC 1 cut(s) 407
MluCI AATT 4 cut(s) 657, 684, 703, 1052
MlyI GAGTC 1 cut(s) 137
MmeI TCCRAC 3 cut(s) 498, 504, 919
MnlI CCTC 6 cut(s) 29, 170, 196, 216, 308, 439
MroI TCCGGA 1 cut(s) 983
MroNI GCCGGC 2 cut(s) 290, 587
MseI TTAA 2 cut(s) 804, 990
MslI CAYNNNNRTG 3 cut(s) 299, 363, 491
MspA1I CMGCKG 4 cut(s) 32, 200, 450, 1130
MspR9I CCNGG 3 cut(s) 320, 693, 735
MunI CAATTG 1 cut(s) 684
MwoI GCNNNNNNNGC 4 cut(s) 291, 441, 1133, 1152
NaeI GCCGGC 2 cut(s) 292, 589
NciI CCSGG 3 cut(s) 320, 693, 735
NcoI CCATGG 1 cut(s) 739
NdeII GATC 3 cut(s) 843, 937, 1086
NgoMIV GCCGGC 2 cut(s) 290, 587
NlaIII CATG 8 cut(s) 261, 362, 620, 743, 902, 1025, 1143, 1151
NlaIV GGNNCC 7 cut(s) 121, 295, 306, 406, 691, 697, 733
NmuCI GTSAC 5 cut(s) 94, 370, 637, 668, 1003
NspI RCATGY 2 cut(s) 362, 902
OliI CACNNNNGTG 1 cut(s) 299
PceI AGGCCT 1 cut(s) 155
PciI ACATGT 1 cut(s) 898
PdiI GCCGGC 2 cut(s) 292, 589
PfeI GAWTC 1 cut(s) 744
PinAI ACCGGT 1 cut(s) 665
PkrI GCNGC 7 cut(s) 34, 88, 91, 548, 586, 1129, 1145
PleI GAGTC 1 cut(s) 137
PpsI GAGTC 1 cut(s) 137
PscI ACATGT 1 cut(s) 898
Psp1406I AACGTT 1 cut(s) 915
PspEI GGTNACC 1 cut(s) 370
PspFI CCCAGC 2 cut(s) 28, 446
PspN4I GGNNCC 7 cut(s) 121, 295, 306, 406, 691, 697, 733
PspPI GGNCC 6 cut(s) 171, 254, 304, 689, 731, 769
PstI CTGCAG 2 cut(s) 37, 91
PvuII CAGCTG 2 cut(s) 32, 1130
RsaI GTAC 4 cut(s) 789, 826, 1027, 1171
RsaNI GTAC 4 cut(s) 788, 825, 1026, 1170
RseI CAYNNNNRTG 3 cut(s) 299, 363, 491
SaqAI TTAA 2 cut(s) 804, 990
SatI GCNGC 7 cut(s) 33, 87, 90, 547, 585, 1128, 1144
Sau3AI GATC 3 cut(s) 843, 937, 1086
Sau96I GGNCC 6 cut(s) 171, 254, 304, 689, 731, 769
SchI GAGTC 1 cut(s) 137
ScrFI CCNGG 3 cut(s) 320, 693, 735
SduI GDGCHC 1 cut(s) 407
SfaNI GCATC 2 cut(s) 73, 621
SfcI CTRYAG 2 cut(s) 33, 87
SinI GGWCC 2 cut(s) 731, 769
SmiMI CAYNNNNRTG 3 cut(s) 299, 363, 491
SpeI ACTAGT 1 cut(s) 74
Sse9I AATT 4 cut(s) 657, 684, 703, 1052
SseBI AGGCCT 1 cut(s) 155
SsiI CCGC 6 cut(s) 198, 216, 283, 450, 585, 1155
SspMI CTAG 3 cut(s) 75, 864, 879
StuI AGGCCT 1 cut(s) 155
StyD4I CCNGG 3 cut(s) 318, 691, 733
StyI CCWWGG 1 cut(s) 739
TaaI ACNGT 4 cut(s) 398, 802, 811, 1174
TaiI ACGT 3 cut(s) 723, 918, 1005
TaqI TCGA 1 cut(s) 1056
TasI AATT 4 cut(s) 657, 684, 703, 1052
TatI WGTACW 1 cut(s) 787
TauI GCSGC 1 cut(s) 587
TfiI GAWTC 1 cut(s) 744
Tru1I TTAA 2 cut(s) 804, 990
Tru9I TTAA 2 cut(s) 804, 990
TscAI CASTG 5 cut(s) 109, 468, 826, 874, 1053
TseFI GTSAC 5 cut(s) 94, 370, 637, 668, 1003
TseI GCWGC 6 cut(s) 32, 86, 89, 546, 1127, 1143
Tsp45I GTSAC 5 cut(s) 94, 370, 637, 668, 1003
TspDTI ATGAA 2 cut(s) 1010, 1128
TspGWI ACGGA 2 cut(s) 178, 1052
TspRI CASTG 5 cut(s) 109, 468, 826, 874, 1053
VpaK11BI GGWCC 2 cut(s) 731, 769
XapI RAATTY 3 cut(s) 657, 703, 1052
XceI RCATGY 2 cut(s) 362, 902
XcmI CCANNNNNNNNNTGG 2 cut(s) 487, 629
XspI CTAG 3 cut(s) 75, 864, 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.