RchiOBHm_Chr2g0115811

Polygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000702
Physical Location & Seq
Reverse (-)
28024820 .. 28026442
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48894

Sequence Viewer

Length: 1116 bp
ATGGCGAATCCCAGAAGCCACATTTTTCTCTCACTCCTCTTTCTCTTCATAAACTCCGGCGCCTCCACTGCAGTTACTTACAATGTGGCCGATTTAGGAGCCAAACCAGACGGCCAGACCGACTCAATCAAAGCCTTCCTTTCTGCATGGGCCGAAGCTTGTGCCTCGGCCAATCCCTCGGTTATTTATGTCCCGGCCGGAAGGTTCTTGCTTCGCAATGCAGTCTTCAGCGGACCATGTAAAAACATAGCCATCACATTTCGCATTGCCGGCACACTCGTGTCCCCGTCGGATTACCGGGTCATAGGAAATGCCGGTAACTGGCTTTTGTTTGAGCATGTGAATGGGATTACAATCTCGGGTGGAATTCTTGATGGACAAGGCACTGGTCTGTGGGATTGCAAAGCCAACGGCAATAGTTGCCCAGCGGAGCAACTCCAAATGTTTCACATAGTCATCAACGGCTGCAACAACGTGAAAATGCAAGGTGTTAGGGTTTCTGCCTCCGGTAACAGCCCAAACACCGACGGAATCCACGTCCAACAGTCCTCGGGCGTCACTATTCTCGACTCTAAAATTGCAACCGGTGACGACTGTGTCTCCATTGGTCCTGGAACCACTAATTTGTGGATCGAAAACATTGCATGTGGACCAGGCCATGGTATCAGCATTGGAAGTCTAGGCAAGGACCAGCAGGAGGATGGTGTGCAAAATGTAACAGTGAAAACTGTTACATTTACTGGTACTCAAAATGGTGTGAGAATTAAATCATGGGGGAGACCTAGCACGGGGTTTGCCAAGAACATTCTTTTCCAACACGCTGTGATGGTCGATGTCCAAAATCCTATCATCATTGATCAAAATTACTGCCCTGGCGAGAAAGGTTGTCCTGGTCAGGTTTCGGGAGTTCAAATTAGCGATGTGACATATCAAGACATCCACGGGACATCAGCAACAGAAGTTGCGGTGAAATTCGACTGTAGTTCAAAGTATCCTTGTAACAAGATCACATTGAATGATGTGAAGCTCAATTACAAGAACCAAGCGGCCGAAGCTTCATGTAGCCATGCCGGTGGAACGGCTGAGGGTACGGTTCAACCTACAAGTTGTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

371

Amino Acids

38.99

Weight (kDa)

6.23

Isoelectric Point (pI)

32.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 28 - 259 4e-14 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 54 - 140 1e-07 Glycosyl hydrolases family 28
Glyco_hydro_28 PF00295 146 - 355 7e-68 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000702)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43870 AT3G59850 AT3G59850
fragaria_vesca FvH4_1g00290 FvH4_1g00290 FvH4_1g21842 FvH4_1g21850 FvH4_1g21851
malus_domestica MD00G1070500.v1.1 MD00G1087900.v1.1
prunus_persica Prupe.4G261700_v2.0.a1 Prupe.4G261800_v2.0.a1 Prupe.4G261900_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.7G269200_v2.0.a1
pyrus_communis pycom02g00030 pycom03g19680
rosa_chinensis RchiOBHm_Chr2g0084591 RchiOBHm_Chr2g0085391 RchiOBHm_Chr2g0115741 RchiOBHm_Chr2g0115771 RchiOBHm_Chr2g0115801 RchiOBHm_Chr2g0115811 RchiOBHm_Chr2g0115821 RchiOBHm_Chr5g0021021 RchiOBHm_Chr5g0021031
rosa_laevigata RLG00000015683 RLG00000018208 RLG00000018211 RLG00000018212
rosa_multiflora Rmu_co8137638.1_g000001 Rmu_sc0000742.1_g000006 Rmu_sc0004926.1_g000013 Rmu_sc0008355.1_g000010 Rmu_sc0011452.1_g000015 Rmu_ssc0000197.1_g000031 Rmu_ssc0000197.1_g000032 Rmu_ssc0000197.1_g000056
rosa_roxburghii Rroxscaffold_2G00127770 Rroxscaffold_2G00127780 Rroxscaffold_2G00127790 Rroxscaffold_2G00127830 Rroxscaffold_2G00127850 Rroxscaffold_2G00128630 Rroxscaffold_2G00128640 Rroxscaffold_2G00128680 Rroxscaffold_2G00128730 Rroxscaffold_2G00128740
rosa_rugosa Rorug01G0455200 Rorug01G0460100 Rorug02G0199800 Rorug02G0199900
rosa_samantha Rh2BG003000 Rh2BG267500 Rh2BG267700 Rh2BG267800 Rh2BG267900 Rh2CG003400 Rh2CG010000 Rh2CG262800 Rh2CG263200 Rh2CG263300 Rh2CG263400 Rh5CG165700 Rh5CG165800
rosa_wichuraiana Rw0G014320 Rw0G014330 Rw1G010220 Rw2G000800 Rw2G020110 Rw2G020130 Rw2G020150 Rw2G020160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 596
AccB1I GGYRCC 1 cut(s) 59
AccB7I CCANNNNNTGG 1 cut(s) 659
AciI CCGC 4 cut(s) 231, 428, 965, 1046
AclWI GGATC 1 cut(s) 638
AcoI YGGCCR 5 cut(s) 87, 112, 168, 195, 1047
AcsI RAATTY 2 cut(s) 366, 971
AcuI CTGAAG 1 cut(s) 211
AcyI GRCGYC 2 cut(s) 60, 555
AdeI CACNNNGTG 1 cut(s) 823
AfaI GTAC 2 cut(s) 745, 1090
AfiI CCNNNNNNNGG 4 cut(s) 321, 659, 697, 788
AgeI ACCGGT 1 cut(s) 584
AgsI TTSAA 4 cut(s) 911, 987, 1015, 1097
AjiI CACGTC 1 cut(s) 538
AjnI CCWGG 4 cut(s) 610, 652, 871, 889
AleI CACNNNNGTG 1 cut(s) 278
AluBI AGCT 3 cut(s) 158, 1027, 1055
AluI AGCT 3 cut(s) 158, 1027, 1055
Alw26I GTCTC 2 cut(s) 604, 772
AlwI GGATC 1 cut(s) 638
Ama87I CYCGRG 2 cut(s) 358, 550
AoxI GGCC 7 cut(s) 87, 112, 150, 168, 195, 655, 1047
ApeKI GCWGC 1 cut(s) 465
ApoI RAATTY 2 cut(s) 366, 971
AsiGI ACCGGT 1 cut(s) 584
AspLEI GCGC 1 cut(s) 62
AspS9I GGNCC 5 cut(s) 150, 233, 608, 650, 688
AsuC2I CCSGG 2 cut(s) 194, 299
AsuHPI GGTGA 2 cut(s) 599, 979
AvaI CYCGRG 2 cut(s) 358, 550
AvaII GGWCC 4 cut(s) 233, 608, 650, 688
BanI GGYRCC 1 cut(s) 59
BarI GAAGNNNNNNTAC 2 cut(s) 1016, 1048
BauI CACGAG 1 cut(s) 278
BbsI GAAGAC 1 cut(s) 217
BbvCI CCTCAGC 1 cut(s) 1083
BbvI GCAGC 1 cut(s) 452
BccI CCATC 4 cut(s) 260, 368, 695, 820
BceAI ACGGC 4 cut(s) 127, 427, 478, 1095
BcgI CGANNNNNNTGC 4 cut(s) 143, 177, 623, 657
BciT130I CCWGG 4 cut(s) 612, 654, 873, 891
BciVI GTATCC 1 cut(s) 1002
BclI TGATCA 1 cut(s) 856
BcnI CCSGG 2 cut(s) 194, 299
BcoDI GTCTC 2 cut(s) 604, 772
BfaI CTAG 2 cut(s) 680, 783
BfmI CTRYAG 3 cut(s) 69, 979, 1112
BfoI RGCGCY 1 cut(s) 63
BfuI GTATCC 1 cut(s) 1002
BisI GCNGC 2 cut(s) 466, 1047
BlsI GCNGC 2 cut(s) 467, 1048
Bme1390I CCNGG 6 cut(s) 194, 299, 612, 654, 873, 891
Bme18I GGWCC 4 cut(s) 233, 608, 650, 688
BmeT110I CYCGRG 2 cut(s) 358, 550
BmgBI CACGTC 1 cut(s) 538
BmgT120I GGNCC 5 cut(s) 150, 233, 608, 650, 688
BmiI GGNNCC 3 cut(s) 61, 100, 616
BmrFI CCNGG 6 cut(s) 194, 299, 612, 654, 873, 891
BpiI GAAGAC 1 cut(s) 217
Bpu10I CCTNAGC 1 cut(s) 1083
BpuMI CCSGG 2 cut(s) 194, 299
BsaBI GATNNNNATC 1 cut(s) 353
BsaHI GRCGYC 2 cut(s) 60, 555
BsaI GGTCTC 1 cut(s) 772
BsaJI CCNNGG 6 cut(s) 165, 177, 549, 658, 871, 940
BsaWI WCCGGW 2 cut(s) 506, 584
BsaXI ACNNNNNCTCC 2 cut(s) 584, 614
Bsc4I CCNNNNNNNGG 4 cut(s) 321, 659, 697, 788
Bse118I RCCGGY 4 cut(s) 269, 314, 584, 1070
Bse1I ACTGG 3 cut(s) 326, 391, 745
Bse3DI GCAATG 3 cut(s) 223, 264, 639
Bse8I GATNNNNATC 1 cut(s) 353
BseBI CCWGG 4 cut(s) 612, 654, 873, 891
BseDI CCNNGG 6 cut(s) 165, 177, 549, 658, 871, 940
BseGI GGATG 2 cut(s) 706, 936
BseJI GATNNNNATC 1 cut(s) 353
BseLI CCNNNNNNNGG 4 cut(s) 321, 659, 697, 788
BseMI GCAATG 3 cut(s) 223, 264, 639
BseMII CTCAG 1 cut(s) 1074
BseNI ACTGG 3 cut(s) 326, 391, 745
BseRI GAGGAG 1 cut(s) 26
BseX3I CGGCCG 2 cut(s) 195, 1047
BseXI GCAGC 1 cut(s) 452
BseYI CCCAGC 1 cut(s) 424
Bsh1285I CGRYCG 2 cut(s) 198, 1050
BshFI GGCC 7 cut(s) 89, 114, 152, 170, 197, 657, 1049
BshNI GGYRCC 1 cut(s) 59
BshTI ACCGGT 1 cut(s) 584
BsiEI CGRYCG 2 cut(s) 198, 1050
BsiHKCI CYCGRG 2 cut(s) 358, 550
BsiSI CCGG 9 cut(s) 57, 194, 198, 270, 298, 315, 507, 585, 1071
BslFI GGGAC 3 cut(s) 176, 268, 958
BslI CCNNNNNNNGG 4 cut(s) 321, 659, 697, 788
BsmAI GTCTC 2 cut(s) 604, 772
BsmFI GGGAC 3 cut(s) 176, 268, 958
BsnI GGCC 7 cut(s) 89, 114, 152, 170, 197, 657, 1049
Bso31I GGTCTC 1 cut(s) 772
BsoBI CYCGRG 2 cut(s) 358, 550
Bsp143I GATC 3 cut(s) 630, 856, 1005
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 4 cut(s) 231, 428, 965, 1046
BspANI GGCC 7 cut(s) 89, 114, 152, 170, 197, 657, 1049
BspCNI CTCAG 1 cut(s) 1075
BspLI GGNNCC 3 cut(s) 61, 100, 616
BspMAI CTGCAG 1 cut(s) 73
BspPI GGATC 1 cut(s) 638
BspT107I GGYRCC 1 cut(s) 59
BspTNI GGTCTC 1 cut(s) 772
BsrDI GCAATG 3 cut(s) 223, 264, 639
BsrFI RCCGGY 4 cut(s) 269, 314, 584, 1070
BsrI ACTGG 3 cut(s) 326, 391, 745
BssAI RCCGGY 4 cut(s) 269, 314, 584, 1070
BssECI CCNNGG 6 cut(s) 165, 177, 549, 658, 871, 940
BssMI GATC 3 cut(s) 630, 856, 1005
BssNI GRCGYC 2 cut(s) 60, 555
BssSI CACGAG 1 cut(s) 278
BssT1I CCWWGG 1 cut(s) 658
Bst2BI CACGAG 1 cut(s) 278
Bst2UI CCWGG 4 cut(s) 612, 654, 873, 891
Bst4CI ACNGT 6 cut(s) 546, 596, 721, 730, 980, 1093
Bst6I CTCTTC 1 cut(s) 50
BstACI GRCGYC 2 cut(s) 60, 555
BstAPI GCANNNNNTGC 1 cut(s) 420
BstC8I GCNNGC 1 cut(s) 271
BstDEI CTNAG 1 cut(s) 1083
BstDSI CCRYGG 2 cut(s) 658, 940
BstF5I GGATG 2 cut(s) 706, 936
BstH2I RGCGCY 1 cut(s) 63
BstHHI GCGC 1 cut(s) 62
BstKTI GATC 3 cut(s) 633, 859, 1008
BstMAI GTCTC 2 cut(s) 604, 772
BstMBI GATC 3 cut(s) 630, 856, 1005
BstMCI CGRYCG 2 cut(s) 198, 1050
BstMWI GCNNNNNNNGC 4 cut(s) 68, 270, 420, 1052
BstNI CCWGG 4 cut(s) 612, 654, 873, 891
BstNSI RCATGY 2 cut(s) 341, 648
BstSCI CCNGG 6 cut(s) 192, 297, 610, 652, 871, 889
BstSFI CTRYAG 3 cut(s) 69, 979, 1112
BstV1I GCAGC 1 cut(s) 452
BstV2I GAAGAC 1 cut(s) 217
BstXI CCANNNNNNTGG 1 cut(s) 1073
BstZI CGGCCG 2 cut(s) 195, 1047
BsuI GTATCC 1 cut(s) 1002
BsuRI GGCC 7 cut(s) 89, 114, 152, 170, 197, 657, 1049
BtgI CCRYGG 2 cut(s) 658, 940
BtgZI GCGATG 1 cut(s) 933
BtrI CACGTC 1 cut(s) 538
BtsCI GGATG 2 cut(s) 706, 936
BtsI GCAGTG 1 cut(s) 66
BtsIMutI CAGTG 3 cut(s) 66, 384, 726
Cac8I GCNNGC 1 cut(s) 271
CfoI GCGC 1 cut(s) 62
Cfr10I RCCGGY 4 cut(s) 269, 314, 584, 1070
Cfr13I GGNCC 5 cut(s) 150, 233, 608, 650, 688
CseI GACGC 1 cut(s) 544
Csp6I GTAC 2 cut(s) 744, 1089
CspAI ACCGGT 1 cut(s) 584
CviAII CATG 8 cut(s) 147, 237, 338, 645, 659, 771, 1059, 1067
CviQI GTAC 2 cut(s) 744, 1089
DdeI CTNAG 1 cut(s) 1083
DinI GGCGCC 1 cut(s) 61
DpnI GATC 3 cut(s) 632, 858, 1007
DpnII GATC 3 cut(s) 630, 856, 1005
DraIII CACNNNGTG 1 cut(s) 823
DrdI GACNNNNNNGTC 1 cut(s) 596
DseDI GACNNNNNNGTC 1 cut(s) 596
EaeI YGGCCR 5 cut(s) 87, 112, 168, 195, 1047
EagI CGGCCG 2 cut(s) 195, 1047
Eam1104I CTCTTC 1 cut(s) 50
EarI CTCTTC 1 cut(s) 50
EclXI CGGCCG 2 cut(s) 195, 1047
Eco130I CCWWGG 1 cut(s) 658
Eco31I GGTCTC 1 cut(s) 772
Eco47I GGWCC 4 cut(s) 233, 608, 650, 688
Eco52I CGGCCG 2 cut(s) 195, 1047
Eco57I CTGAAG 1 cut(s) 211
Eco88I CYCGRG 2 cut(s) 358, 550
EcoRI GAATTC 1 cut(s) 366
EcoRII CCWGG 4 cut(s) 610, 652, 871, 889
EcoT14I CCWWGG 1 cut(s) 658
EgeI GGCGCC 1 cut(s) 61
EheI GGCGCC 1 cut(s) 61
ErhI CCWWGG 1 cut(s) 658
FaeI CATG 8 cut(s) 150, 240, 341, 648, 662, 774, 1062, 1070
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FaqI GGGAC 3 cut(s) 176, 268, 958
FatI CATG 8 cut(s) 146, 236, 337, 644, 658, 770, 1058, 1066
FbaI TGATCA 1 cut(s) 856
Fnu4HI GCNGC 2 cut(s) 466, 1047
FokI GGATG 2 cut(s) 713, 923
Fsp4HI GCNGC 2 cut(s) 466, 1047
FspBI CTAG 2 cut(s) 680, 783
GlaI GCGC 1 cut(s) 61
GluI GCNGC 2 cut(s) 466, 1047
GsaI CCCAGC 1 cut(s) 428
HaeII RGCGCY 1 cut(s) 63
HaeIII GGCC 7 cut(s) 89, 114, 152, 170, 197, 657, 1049
HapII CCGG 9 cut(s) 57, 194, 198, 270, 298, 315, 507, 585, 1071
HgaI GACGC 1 cut(s) 544
HhaI GCGC 1 cut(s) 62
Hin1I GRCGYC 2 cut(s) 60, 555
Hin1II CATG 8 cut(s) 150, 240, 341, 648, 662, 774, 1062, 1070
Hin6I GCGC 1 cut(s) 60
HinP1I GCGC 1 cut(s) 60
HindIII AAGCTT 2 cut(s) 156, 1053
HinfI GANTC 4 cut(s) 7, 122, 531, 569
HpaII CCGG 9 cut(s) 57, 194, 198, 270, 298, 315, 507, 585, 1071
HphI GGTGA 2 cut(s) 599, 979
Hpy166II GTNNAC 1 cut(s) 650
Hpy188I TCNGA 1 cut(s) 292
Hpy188III TCNNGA 4 cut(s) 371, 566, 903, 932
Hpy8I GTNNAC 1 cut(s) 650
Hpy99I CGWCG 2 cut(s) 292, 530
HpyAV CCTTC 2 cut(s) 145, 195
HpyCH4III ACNGT 6 cut(s) 546, 596, 721, 730, 980, 1093
HpyCH4IV ACGT 2 cut(s) 474, 537
HpyCH4V TGCA 9 cut(s) 71, 146, 221, 402, 468, 484, 581, 644, 709
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 270, 420, 1052
HpyF3I CTNAG 1 cut(s) 1083
HpySE526I ACGT 2 cut(s) 474, 537
Hsp92I GRCGYC 2 cut(s) 60, 555
Hsp92II CATG 8 cut(s) 150, 240, 341, 648, 662, 774, 1062, 1070
HspAI GCGC 1 cut(s) 60
KasI GGCGCC 1 cut(s) 59
KroI GCCGGC 1 cut(s) 269
KroNI GCCGGC 1 cut(s) 271
Ksp22I TGATCA 1 cut(s) 856
Kzo9I GATC 3 cut(s) 630, 856, 1005
LmnI GCTCC 2 cut(s) 98, 430
Lsp1109I GCAGC 1 cut(s) 452
MaeI CTAG 2 cut(s) 680, 783
MaeII ACGT 2 cut(s) 474, 537
MaeIII GTNAC 9 cut(s) 73, 317, 509, 556, 587, 715, 730, 922, 998
MalI GATC 3 cut(s) 632, 858, 1007
MboI GATC 3 cut(s) 630, 856, 1005
MboII GAAGA 2 cut(s) 37, 217
MluCI AATT 8 cut(s) 366, 576, 622, 762, 862, 912, 971, 1030
Mly113I GGCGCC 1 cut(s) 60
MlyI GAGTC 2 cut(s) 116, 563
MmeI TCCRAC 3 cut(s) 270, 565, 838
MnlI CCTC 8 cut(s) 47, 73, 175, 187, 514, 559, 691, 1078
MroNI GCCGGC 1 cut(s) 269
MseI TTAA 1 cut(s) 765
MslI CAYNNNNRTG 3 cut(s) 278, 342, 1071
MspA1I CMGCKG 2 cut(s) 231, 428
MspI CCGG 9 cut(s) 57, 194, 198, 270, 298, 315, 507, 585, 1071
MspR9I CCNGG 6 cut(s) 194, 299, 612, 654, 873, 891
MvaI CCWGG 4 cut(s) 612, 654, 873, 891
MwoI GCNNNNNNNGC 4 cut(s) 68, 270, 420, 1052
NaeI GCCGGC 1 cut(s) 271
NarI GGCGCC 1 cut(s) 60
NciI CCSGG 2 cut(s) 194, 299
NcoI CCATGG 1 cut(s) 658
NdeII GATC 3 cut(s) 630, 856, 1005
NgoMIV GCCGGC 1 cut(s) 269
NlaIII CATG 8 cut(s) 150, 240, 341, 648, 662, 774, 1062, 1070
NlaIV GGNNCC 3 cut(s) 61, 100, 616
NmeAIII GCCGAG 1 cut(s) 146
NmuCI GTSAC 3 cut(s) 556, 587, 922
NspI RCATGY 2 cut(s) 341, 648
OliI CACNNNNGTG 1 cut(s) 278
PcsI WCGNNNNNNNCGW 2 cut(s) 117, 534
PdiI GCCGGC 1 cut(s) 271
PfeI GAWTC 2 cut(s) 7, 531
PflFI GACNNNGTC 1 cut(s) 596
PflMI CCANNNNNTGG 1 cut(s) 659
PfoI TCCNGGA 1 cut(s) 610
PinAI ACCGGT 1 cut(s) 584
PkrI GCNGC 2 cut(s) 467, 1048
PleI GAGTC 2 cut(s) 116, 563
PluTI GGCGCC 1 cut(s) 63
PpsI GAGTC 2 cut(s) 116, 563
Psp6I CCWGG 4 cut(s) 610, 652, 871, 889
PspFI CCCAGC 1 cut(s) 424
PspGI CCWGG 4 cut(s) 610, 652, 871, 889
PspN4I GGNNCC 3 cut(s) 61, 100, 616
PspPI GGNCC 5 cut(s) 150, 233, 608, 650, 688
PstI CTGCAG 1 cut(s) 73
PsyI GACNNNGTC 1 cut(s) 596
RsaI GTAC 2 cut(s) 745, 1090
RsaNI GTAC 2 cut(s) 744, 1089
RseI CAYNNNNRTG 3 cut(s) 278, 342, 1071
SaqAI TTAA 1 cut(s) 765
SatI GCNGC 2 cut(s) 466, 1047
Sau3AI GATC 3 cut(s) 630, 856, 1005
Sau96I GGNCC 5 cut(s) 150, 233, 608, 650, 688
SchI GAGTC 2 cut(s) 116, 563
ScrFI CCNGG 6 cut(s) 194, 299, 612, 654, 873, 891
SfcI CTRYAG 3 cut(s) 69, 979, 1112
SfoI GGCGCC 1 cut(s) 61
SinI GGWCC 4 cut(s) 233, 608, 650, 688
SmiMI CAYNNNNRTG 3 cut(s) 278, 342, 1071
Sse9I AATT 8 cut(s) 366, 576, 622, 762, 862, 912, 971, 1030
SsiI CCGC 4 cut(s) 231, 428, 965, 1046
SspDI GGCGCC 1 cut(s) 59
SspMI CTAG 2 cut(s) 680, 783
StyD4I CCNGG 6 cut(s) 192, 297, 610, 652, 871, 889
StyI CCWWGG 1 cut(s) 658
TaaI ACNGT 6 cut(s) 546, 596, 721, 730, 980, 1093
TaiI ACGT 2 cut(s) 477, 540
TaqI TCGA 4 cut(s) 567, 633, 831, 975
TaqII GACCGA 1 cut(s) 134
TasI AATT 8 cut(s) 366, 576, 622, 762, 862, 912, 971, 1030
TauI GCSGC 1 cut(s) 1049
TfiI GAWTC 2 cut(s) 7, 531
Tru1I TTAA 1 cut(s) 765
Tru9I TTAA 1 cut(s) 765
TscAI CASTG 3 cut(s) 73, 391, 726
TseFI GTSAC 3 cut(s) 556, 587, 922
TseI GCWGC 1 cut(s) 465
Tsp45I GTSAC 3 cut(s) 556, 587, 922
TspDTI ATGAA 2 cut(s) 37, 1047
TspGWI ACGGA 1 cut(s) 543
TspRI CASTG 3 cut(s) 73, 391, 726
Tth111I GACNNNGTC 1 cut(s) 596
Van91I CCANNNNNTGG 1 cut(s) 659
VpaK11BI GGWCC 4 cut(s) 233, 608, 650, 688
XapI RAATTY 2 cut(s) 366, 971
XceI RCATGY 2 cut(s) 341, 648
XcmI CCANNNNNNNNNTGG 1 cut(s) 698
XspI CTAG 2 cut(s) 680, 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.