RchiOBHm_Chr5g0021021

Polygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000702
Physical Location & Seq
Forward (+)
15277487 .. 15279819
2333 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30109

Sequence Viewer

Length: 1275 bp
ATGGAAAGAAGCAAAAGATCCAAACCAGCAGTGCCTATAAATACAGTTAATTCAACTTCCTCACCACTACATCCTTCACTCCAACTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATGGAAAATCCCATAAGCCTCATTTTTCTCTCACTTTTTATCGTCTTCATAAACTCAGCCGTATCAACTGCAGTCACTTACAATGTGGCTAATTTAGGAGCCAAACCAGATGGCAAAACTGACTCAACCAAGGCCTTCCTTTCTGGATGGGCCGAAGCTTGTGCCTCGGCCAAGCCCTCGGTCATTTATGTCCCAGCCGGAAGGTTCTTGCTTCGCAATGCGATTTTCAACGGGCCATGCAAGAACAGGGCCATCACTTTTCGCATTGCTGGCACACTCGTCGTCCCTTCATATTACCAGGTCATAGGAAATGCTGGTAACTGGCTTTTCTTTAGGCATGTGAATGGGGTTACCATCTCCCGTGGAATTCTTGACGGACAAGGCACTGGTTTGTGGGATTGCAAGGCCTCCGGCAAGGTTTGCGCCAGCGGAGCAACTACACTGGAGTTTTCCAACTCGAACAACATTATCGTGAGTGGAGTGACATCCCTAAACGCCCAAATGTTCCACATAGTCATCAACGGCTGCAACAATGTGAAAGTGCAAGGTGTTAGGGTTTCTGCCTCTGGTCACAGCCCAAACACCGATGGAATCCACGTCCAAAAGTCCTCGGGCGTCACTATTCTCAACTCTAAGATTGCAATCATTGGGAGTTTAGGCAAGGACCTGGAGGAGGATGGAGTGCAAAATGTAACCGTCAAAACTGTTACATTTACAGGTACTCAAAATGGTCTGAGAATCAAATCATGGGGAAGACCCAGTACTGGGTTTGCTAAGAACATTCTTTTCCAACATGCCGTCATGTTCAATGTCCAAAATCCGATCGTTATTGATCAAAATTATTGCCCAGGCGAAAAAGGGTGCCCTGGTCAGGTTTCGGGAGTTCAAATTAGTGACGTGACATATCAAAACATCCACGGCACATCAGCAACACAAGTTGCTGTGAAATTCGACTGTTGTTCTAGGTACCCTTGTAGCAAGATCACACTGGATGATGTGAAGCTCAGTTACAAGAACCAAGCAGCCGAAGCTTCATGTAGCCATGCCGGTGGAACAGCTGTGGGTATGGTTCAGCCGACAAGTTGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

424

Amino Acids

44.79

Weight (kDa)

9.25

Isoelectric Point (pI)

25.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 89 - 312 2e-15 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 115 - 275 2e-27 Glycosyl hydrolases family 28
Glyco_hydro_28 PF00295 277 - 408 2.7e-34 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000702)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43870 AT3G59850 AT3G59850
fragaria_vesca FvH4_1g00290 FvH4_1g00290 FvH4_1g21842 FvH4_1g21850 FvH4_1g21851
malus_domestica MD00G1070500.v1.1 MD00G1087900.v1.1
prunus_persica Prupe.4G261700_v2.0.a1 Prupe.4G261800_v2.0.a1 Prupe.4G261900_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.7G269200_v2.0.a1
pyrus_communis pycom02g00030 pycom03g19680
rosa_chinensis RchiOBHm_Chr2g0084591 RchiOBHm_Chr2g0085391 RchiOBHm_Chr2g0115741 RchiOBHm_Chr2g0115771 RchiOBHm_Chr2g0115801 RchiOBHm_Chr2g0115811 RchiOBHm_Chr2g0115821 RchiOBHm_Chr5g0021021 RchiOBHm_Chr5g0021031
rosa_laevigata RLG00000015683 RLG00000018208 RLG00000018211 RLG00000018212
rosa_multiflora Rmu_co8137638.1_g000001 Rmu_sc0000742.1_g000006 Rmu_sc0004926.1_g000013 Rmu_sc0008355.1_g000010 Rmu_sc0011452.1_g000015 Rmu_ssc0000197.1_g000031 Rmu_ssc0000197.1_g000032 Rmu_ssc0000197.1_g000056
rosa_roxburghii Rroxscaffold_2G00127770 Rroxscaffold_2G00127780 Rroxscaffold_2G00127790 Rroxscaffold_2G00127830 Rroxscaffold_2G00127850 Rroxscaffold_2G00128630 Rroxscaffold_2G00128640 Rroxscaffold_2G00128680 Rroxscaffold_2G00128730 Rroxscaffold_2G00128740
rosa_rugosa Rorug01G0455200 Rorug01G0460100 Rorug02G0199800 Rorug02G0199900
rosa_samantha Rh2BG003000 Rh2BG267500 Rh2BG267700 Rh2BG267800 Rh2BG267900 Rh2CG003400 Rh2CG010000 Rh2CG262800 Rh2CG263200 Rh2CG263300 Rh2CG263400 Rh5CG165700 Rh5CG165800
rosa_wichuraiana Rw0G014320 Rw0G014330 Rw1G010220 Rw2G000800 Rw2G020110 Rw2G020130 Rw2G020150 Rw2G020160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1149
AccB1I GGYRCC 2 cut(s) 1044, 1149
AciI CCGC 1 cut(s) 612
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 1 cut(s) 351
AcsI RAATTY 2 cut(s) 549, 1130
AcyI GRCGYC 1 cut(s) 798
AfaI GTAC 3 cut(s) 904, 946, 1151
AfiI CCNNNNNNNGG 4 cut(s) 856, 947, 948, 1054
AgsI TTSAA 4 cut(s) 54, 412, 991, 1070
AjiI CACGTC 2 cut(s) 781, 1081
AjnI CCWGG 4 cut(s) 480, 849, 1030, 1048
AluBI AGCT 4 cut(s) 341, 1186, 1214, 1241
AluI AGCT 4 cut(s) 341, 1186, 1214, 1241
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 793
AoxI GGCC 6 cut(s) 315, 333, 351, 416, 432, 588
ApeKI GCWGC 2 cut(s) 708, 1205
ApoI RAATTY 2 cut(s) 549, 1130
ArsI GACNNNNNNTTYG 1 cut(s) 1252
Asp718I GGTACC 1 cut(s) 1149
AspLEI GCGC 1 cut(s) 608
AspS9I GGNCC 4 cut(s) 333, 416, 432, 847
AsuHPI GGTGA 1 cut(s) 54
AvaI CYCGRG 1 cut(s) 793
AvaII GGWCC 1 cut(s) 847
BaeGI GKGCMC 1 cut(s) 1049
BaeI ACNNNNGTAYC 2 cut(s) 1141, 1174
BanI GGYRCC 2 cut(s) 1044, 1149
BarI GAAGNNNNNNTAC 4 cut(s) 928, 960, 1175, 1207
BbsI GAAGAC 2 cut(s) 220, 943
BbvI GCAGC 2 cut(s) 695, 1217
BccI CCATC 6 cut(s) 287, 324, 443, 545, 764, 854
BceAI ACGGC 4 cut(s) 227, 721, 965, 1117
BcgI CGANNNNNNTGC 4 cut(s) 326, 360, 445, 479
BciT130I CCWGG 4 cut(s) 482, 851, 1032, 1050
BclI TGATCA 1 cut(s) 1015
BfaI CTAG 1 cut(s) 1146
BfmI CTRYAG 1 cut(s) 252
BisI GCNGC 2 cut(s) 709, 1206
BlsI GCNGC 2 cut(s) 710, 1207
BmcAI AGTACT 1 cut(s) 946
Bme1390I CCNGG 4 cut(s) 482, 851, 1032, 1050
Bme18I GGWCC 1 cut(s) 847
BmeT110I CYCGRG 1 cut(s) 793
BmgBI CACGTC 2 cut(s) 781, 1081
BmgT120I GGNCC 4 cut(s) 333, 416, 432, 847
BmiI GGNNCC 3 cut(s) 283, 1046, 1151
BmrFI CCNGG 4 cut(s) 482, 851, 1032, 1050
BmrI ACTGGG 2 cut(s) 936, 957
BmuI ACTGGG 2 cut(s) 936, 957
BpiI GAAGAC 2 cut(s) 220, 943
BpmI CTGGAG 2 cut(s) 647, 872
BsaBI GATNNNNATC 1 cut(s) 824
BsaHI GRCGYC 1 cut(s) 798
BsaJI CCNNGG 8 cut(s) 312, 348, 360, 544, 792, 1030, 1048, 1099
Bsc4I CCNNNNNNNGG 4 cut(s) 856, 947, 948, 1054
Bse118I RCCGGY 1 cut(s) 1229
Bse1I ACTGG 6 cut(s) 509, 574, 630, 942, 952, 1176
Bse3DI GCAATG 2 cut(s) 406, 447
Bse8I GATNNNNATC 1 cut(s) 824
BseBI CCWGG 4 cut(s) 482, 851, 1032, 1050
BseDI CCNNGG 8 cut(s) 312, 348, 360, 544, 792, 1030, 1048, 1099
BseGI GGATG 6 cut(s) 70, 335, 668, 865, 1095, 1180
BseJI GATNNNNATC 1 cut(s) 824
BseLI CCNNNNNNNGG 4 cut(s) 856, 947, 948, 1054
BseMI GCAATG 2 cut(s) 406, 447
BseMII CTCAG 3 cut(s) 252, 908, 1201
BseNI ACTGG 6 cut(s) 509, 574, 630, 942, 952, 1176
BseRI GAGGAG 1 cut(s) 869
BseSI GKGCMC 1 cut(s) 1049
BseXI GCAGC 2 cut(s) 695, 1217
BseYI CCCAGC 1 cut(s) 376
Bsh1285I CGRYCG 1 cut(s) 1008
BshFI GGCC 6 cut(s) 317, 335, 353, 418, 434, 590
BshNI GGYRCC 2 cut(s) 1044, 1149
BsiEI CGRYCG 1 cut(s) 1008
BsiHKCI CYCGRG 1 cut(s) 793
BsiSI CCGG 3 cut(s) 381, 594, 1230
BslFI GGGAC 2 cut(s) 359, 452
BslI CCNNNNNNNGG 4 cut(s) 856, 947, 948, 1054
BsmFI GGGAC 2 cut(s) 359, 452
BsnI GGCC 6 cut(s) 317, 335, 353, 418, 434, 590
BsoBI CYCGRG 1 cut(s) 793
Bsp1286I GDGCHC 1 cut(s) 1049
Bsp143I GATC 4 cut(s) 17, 1005, 1015, 1164
BspACI CCGC 1 cut(s) 612
BspANI GGCC 6 cut(s) 317, 335, 353, 418, 434, 590
BspCNI CTCAG 3 cut(s) 251, 909, 1200
BspLI GGNNCC 3 cut(s) 283, 1046, 1151
BspMAI CTGCAG 1 cut(s) 256
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 2 cut(s) 1044, 1149
BsrDI GCAATG 2 cut(s) 406, 447
BsrFI RCCGGY 1 cut(s) 1229
BsrI ACTGG 6 cut(s) 509, 574, 630, 942, 952, 1176
BssAI RCCGGY 1 cut(s) 1229
BssECI CCNNGG 8 cut(s) 312, 348, 360, 544, 792, 1030, 1048, 1099
BssMI GATC 4 cut(s) 17, 1005, 1015, 1164
BssNI GRCGYC 1 cut(s) 798
BssT1I CCWWGG 1 cut(s) 312
Bst2UI CCWGG 4 cut(s) 482, 851, 1032, 1050
Bst4CI ACNGT 4 cut(s) 46, 880, 889, 1139
BstACI GRCGYC 1 cut(s) 798
BstAPI GCANNNNNTGC 1 cut(s) 603
BstC8I GCNNGC 2 cut(s) 454, 610
BstDEI CTNAG 5 cut(s) 238, 816, 917, 957, 1187
BstDSI CCRYGG 2 cut(s) 544, 1099
BstEII GGTNACC 1 cut(s) 532
BstENI CCTNNNNNAGG 1 cut(s) 854
BstF5I GGATG 6 cut(s) 70, 335, 668, 865, 1095, 1180
BstHHI GCGC 1 cut(s) 608
BstKTI GATC 4 cut(s) 20, 1008, 1018, 1167
BstMBI GATC 4 cut(s) 17, 1005, 1015, 1164
BstMCI CGRYCG 1 cut(s) 1008
BstMWI GCNNNNNNNGC 4 cut(s) 453, 603, 614, 1211
BstNI CCWGG 4 cut(s) 482, 851, 1032, 1050
BstNSI RCATGY 2 cut(s) 524, 980
BstPI GGTNACC 1 cut(s) 532
BstSCI CCNGG 4 cut(s) 480, 849, 1030, 1048
BstSFI CTRYAG 1 cut(s) 252
BstSLI GKGCMC 1 cut(s) 1049
BstV1I GCAGC 2 cut(s) 695, 1217
BstV2I GAAGAC 2 cut(s) 220, 943
BstX2I RGATCY 1 cut(s) 17
BstXI CCANNNNNNTGG 1 cut(s) 1232
BstYI RGATCY 1 cut(s) 17
BsuRI GGCC 6 cut(s) 317, 335, 353, 418, 434, 590
BtgI CCRYGG 2 cut(s) 544, 1099
BtrI CACGTC 2 cut(s) 781, 1081
BtsCI GGATG 6 cut(s) 70, 335, 668, 865, 1095, 1180
BtsI GCAGTG 1 cut(s) 36
BtsIMutI CAGTG 4 cut(s) 36, 567, 623, 1169
Cac8I GCNNGC 2 cut(s) 454, 610
CfoI GCGC 1 cut(s) 608
Cfr10I RCCGGY 1 cut(s) 1229
Cfr13I GGNCC 4 cut(s) 333, 416, 432, 847
CseI GACGC 1 cut(s) 787
CsiI ACCWGGT 1 cut(s) 480
Csp6I GTAC 3 cut(s) 903, 945, 1150
CviAII CATG 7 cut(s) 420, 521, 930, 977, 985, 1218, 1226
CviQI GTAC 3 cut(s) 903, 945, 1150
DdeI CTNAG 5 cut(s) 238, 816, 917, 957, 1187
DpnI GATC 4 cut(s) 19, 1007, 1017, 1166
DpnII GATC 4 cut(s) 17, 1005, 1015, 1164
EaeI YGGCCR 1 cut(s) 351
Eco130I CCWWGG 1 cut(s) 312
Eco147I AGGCCT 2 cut(s) 317, 590
Eco47I GGWCC 1 cut(s) 847
Eco88I CYCGRG 1 cut(s) 793
Eco91I GGTNACC 1 cut(s) 532
EcoNI CCTNNNNNAGG 1 cut(s) 854
EcoO109I RGGNCCY 1 cut(s) 847
EcoO65I GGTNACC 1 cut(s) 532
EcoRI GAATTC 1 cut(s) 549
EcoRII CCWGG 4 cut(s) 480, 849, 1030, 1048
EcoT14I CCWWGG 1 cut(s) 312
ErhI CCWWGG 1 cut(s) 312
FaeI CATG 7 cut(s) 423, 524, 933, 980, 988, 1221, 1229
FaqI GGGAC 2 cut(s) 359, 452
FatI CATG 7 cut(s) 419, 520, 929, 976, 984, 1217, 1225
FbaI TGATCA 1 cut(s) 1015
Fnu4HI GCNGC 2 cut(s) 709, 1206
FokI GGATG 6 cut(s) 57, 342, 655, 872, 1082, 1187
Fsp4HI GCNGC 2 cut(s) 709, 1206
FspBI CTAG 1 cut(s) 1146
GlaI GCGC 1 cut(s) 607
GluI GCNGC 2 cut(s) 709, 1206
GsaI CCCAGC 1 cut(s) 380
GsuI CTGGAG 2 cut(s) 647, 872
HaeIII GGCC 6 cut(s) 317, 335, 353, 418, 434, 590
HapII CCGG 3 cut(s) 381, 594, 1230
HgaI GACGC 1 cut(s) 787
HhaI GCGC 1 cut(s) 608
Hin1I GRCGYC 1 cut(s) 798
Hin1II CATG 7 cut(s) 423, 524, 933, 980, 988, 1221, 1229
Hin6I GCGC 1 cut(s) 606
HinP1I GCGC 1 cut(s) 606
HindIII AAGCTT 2 cut(s) 339, 1212
HinfI GANTC 3 cut(s) 305, 774, 921
HpaII CCGG 3 cut(s) 381, 594, 1230
HphI GGTGA 1 cut(s) 54
Hpy188I TCNGA 2 cut(s) 918, 1005
Hpy188III TCNNGA 4 cut(s) 327, 554, 655, 1062
Hpy99I CGWCG 1 cut(s) 467
HpyAV CCTTC 4 cut(s) 84, 328, 378, 480
HpyCH4III ACNGT 4 cut(s) 46, 880, 889, 1139
HpyCH4IV ACGT 2 cut(s) 780, 1080
HpyCH4V TGCA 7 cut(s) 254, 423, 585, 711, 727, 824, 868
HpyF10VI GCNNNNNNNGC 4 cut(s) 453, 603, 614, 1211
HpyF3I CTNAG 5 cut(s) 238, 816, 917, 957, 1187
HpySE526I ACGT 2 cut(s) 780, 1080
Hsp92I GRCGYC 1 cut(s) 798
Hsp92II CATG 7 cut(s) 423, 524, 933, 980, 988, 1221, 1229
HspAI GCGC 1 cut(s) 606
KpnI GGTACC 1 cut(s) 1153
Ksp22I TGATCA 1 cut(s) 1015
Kzo9I GATC 4 cut(s) 17, 1005, 1015, 1164
LmnI GCTCC 2 cut(s) 281, 614
Lsp1109I GCAGC 2 cut(s) 695, 1217
MabI ACCWGGT 1 cut(s) 480
MaeI CTAG 1 cut(s) 1146
MaeII ACGT 2 cut(s) 780, 1080
MalI GATC 4 cut(s) 19, 1007, 1017, 1166
MboI GATC 4 cut(s) 17, 1005, 1015, 1164
MboII GAAGA 2 cut(s) 220, 948
MflI RGATCY 1 cut(s) 17
MhlI GDGCHC 1 cut(s) 1049
MluCI AATT 6 cut(s) 49, 274, 549, 1021, 1071, 1130
MlyI GAGTC 1 cut(s) 299
MmeI TCCRAC 3 cut(s) 106, 660, 997
MnlI CCTC 9 cut(s) 70, 212, 358, 370, 601, 757, 802, 847, 850
MseI TTAA 1 cut(s) 48
MslI CAYNNNNRTG 3 cut(s) 525, 653, 1230
MspA1I CMGCKG 2 cut(s) 612, 1241
MspI CCGG 3 cut(s) 381, 594, 1230
MspR9I CCNGG 4 cut(s) 482, 851, 1032, 1050
MvaI CCWGG 4 cut(s) 482, 851, 1032, 1050
MwoI GCNNNNNNNGC 4 cut(s) 453, 603, 614, 1211
NdeII GATC 4 cut(s) 17, 1005, 1015, 1164
NlaIII CATG 7 cut(s) 423, 524, 933, 980, 988, 1221, 1229
NlaIV GGNNCC 3 cut(s) 283, 1046, 1151
NmeAIII GCCGAG 1 cut(s) 329
NmuCI GTSAC 6 cut(s) 256, 664, 752, 799, 1076, 1081
NspI RCATGY 2 cut(s) 524, 980
PceI AGGCCT 2 cut(s) 317, 590
PfeI GAWTC 2 cut(s) 774, 921
PkrI GCNGC 2 cut(s) 710, 1207
Ple19I CGATCG 1 cut(s) 1008
PleI GAGTC 1 cut(s) 299
PpsI GAGTC 1 cut(s) 299
PpuMI RGGWCCY 1 cut(s) 847
Psp5II RGGWCCY 1 cut(s) 847
Psp6I CCWGG 4 cut(s) 480, 849, 1030, 1048
PspEI GGTNACC 1 cut(s) 532
PspFI CCCAGC 1 cut(s) 376
PspGI CCWGG 4 cut(s) 480, 849, 1030, 1048
PspN4I GGNNCC 3 cut(s) 283, 1046, 1151
PspPI GGNCC 4 cut(s) 333, 416, 432, 847
PspPPI RGGWCCY 1 cut(s) 847
PstI CTGCAG 1 cut(s) 256
PsuI RGATCY 1 cut(s) 17
PvuI CGATCG 1 cut(s) 1008
PvuII CAGCTG 1 cut(s) 1241
RsaI GTAC 3 cut(s) 904, 946, 1151
RsaNI GTAC 3 cut(s) 903, 945, 1150
RseI CAYNNNNRTG 3 cut(s) 525, 653, 1230
SaqAI TTAA 1 cut(s) 48
SatI GCNGC 2 cut(s) 709, 1206
Sau3AI GATC 4 cut(s) 17, 1005, 1015, 1164
Sau96I GGNCC 4 cut(s) 333, 416, 432, 847
ScaI AGTACT 1 cut(s) 946
SchI GAGTC 1 cut(s) 299
ScrFI CCNGG 4 cut(s) 482, 851, 1032, 1050
SduI GDGCHC 1 cut(s) 1049
SexAI ACCWGGT 1 cut(s) 480
SfcI CTRYAG 1 cut(s) 252
SinI GGWCC 1 cut(s) 847
SmiMI CAYNNNNRTG 3 cut(s) 525, 653, 1230
Sse9I AATT 6 cut(s) 49, 274, 549, 1021, 1071, 1130
SseBI AGGCCT 2 cut(s) 317, 590
SsiI CCGC 1 cut(s) 612
SspMI CTAG 1 cut(s) 1146
StuI AGGCCT 2 cut(s) 317, 590
StyD4I CCNGG 4 cut(s) 480, 849, 1030, 1048
StyI CCWWGG 1 cut(s) 312
TaaI ACNGT 4 cut(s) 46, 880, 889, 1139
TaiI ACGT 2 cut(s) 783, 1083
TaqI TCGA 2 cut(s) 641, 1134
TaqII GACCGA 1 cut(s) 352
TasI AATT 6 cut(s) 49, 274, 549, 1021, 1071, 1130
TatI WGTACW 1 cut(s) 944
TfiI GAWTC 2 cut(s) 774, 921
Tru1I TTAA 1 cut(s) 48
Tru9I TTAA 1 cut(s) 48
TscAI CASTG 4 cut(s) 36, 574, 630, 1176
TseFI GTSAC 6 cut(s) 256, 664, 752, 799, 1076, 1081
TseI GCWGC 2 cut(s) 708, 1205
Tsp45I GTSAC 6 cut(s) 256, 664, 752, 799, 1076, 1081
TspDTI ATGAA 3 cut(s) 220, 462, 1206
TspGWI ACGGA 1 cut(s) 573
TspRI CASTG 4 cut(s) 36, 574, 630, 1176
VpaK11BI GGWCC 1 cut(s) 847
XagI CCTNNNNNAGG 1 cut(s) 854
XapI RAATTY 2 cut(s) 549, 1130
XceI RCATGY 2 cut(s) 524, 980
XspI CTAG 1 cut(s) 1146
ZrmI AGTACT 1 cut(s) 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.