Rh2CG263400

Polygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000702
Physical Location & Seq
Reverse (-)
28277118 .. 28289385
12268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG263400.1

Sequence Viewer

Length: 1152 bp
ATGATTTTCACTATATATGATGAAGAGGAGCTAACAGTATCAACTACAGTCACTTACAATGTGGCCGATTTAGGAGCCAAACCAGATGGCAAAACTGACTCAACCAAGGCCTTCCTGTCTGGATGGGCCAAAGCTTGTGCCTCGGCCAAGCCCTCGGTCATTTATGTCCCAGCCGGAAGGTTCTTGCTTCGCAATGCGATTTTCAACCGGCCATGCAAGAACAGGGCCATCACGTTTCGCATTGCTGGCACACTCGTCGCCCCTTCAGATTACCAGGTCATAGGAAATGCTGGTAACTGGCTTTTCTTTAGGCATGTGAATGGGGTTACCATCTCCGGTGGAATTCTTGACGGTCAAGGCACTGGTTTGTGGGATTGCAAGGCCTCCGGCAAGGTTTGCGCCAGTGGAGCAACTACACTGGAGTTTTCCAACTCGAACAACATTGTCGTGAGTGGAGTGACATCCCTAAACGCCCAAATGTTCCACATAGTCATCAACGGCTGCAACAATGTGAAAGTGCAAGGTGTTAGGGTTTCTGCCTCTGGTCACAGCCCAAACACCGATGGAATCCACGTCCAAAAGTCCTCGGGCGTCACTATTCTCGACTCTAAGATTGCAACCGGTGACGACTGTGTCTCAATTGGTCCGGCAACAACTAATCTATGGATTGAAAACGTCGCATGTGGACCCGGCCATGGAATCAACATTGGGAGTTTAGGCAAGGACCTGGAGGAGGATGGAGTGCAAAATGTAACGGTCAAAACTGTTACATTTACAGGTACTCAAAATGGTCTGAGAATCAAATCATGGGGAAGACCCAGTACTGGGTTTGCTAAGAACATTCTTTTCCAACATGCTGTCATGTTCAATGTCCAAAATCCGATCGTTATTGATCAAAATTATTGCCCAGGCGAAAAAGGGTGCCCTGGTCAGGTTTCGGGAGTTCAAATTAGTGACGTGACATATCAAAACATCCACGGCACATCAGCAACACAAGTTGCTGTGAAATTCGACTGTAGTTCTAGGTACCCTTGTAGCAAGATCACACTGGATGATGTGAAGCTCAGTTACAAGAACCAAGCAGCCGAAGCTTCATGCAGCCATGCCGGTGGAACAGCTGTGGGTATGGTTCAACCGACAAGTTGTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

383

Amino Acids

40.37

Weight (kDa)

8.18

Isoelectric Point (pI)

27.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 20 - 271 1.9e-14 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 46 - 367 5.5e-85 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000702)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43870 AT3G59850 AT3G59850
fragaria_vesca FvH4_1g00290 FvH4_1g00290 FvH4_1g21842 FvH4_1g21850 FvH4_1g21851
malus_domestica MD00G1070500.v1.1 MD00G1087900.v1.1
prunus_persica Prupe.4G261700_v2.0.a1 Prupe.4G261800_v2.0.a1 Prupe.4G261900_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.4G262200_v2.0.a1 Prupe.7G269200_v2.0.a1
pyrus_communis pycom02g00030 pycom03g19680
rosa_chinensis RchiOBHm_Chr2g0084591 RchiOBHm_Chr2g0085391 RchiOBHm_Chr2g0115741 RchiOBHm_Chr2g0115771 RchiOBHm_Chr2g0115801 RchiOBHm_Chr2g0115811 RchiOBHm_Chr2g0115821 RchiOBHm_Chr5g0021021 RchiOBHm_Chr5g0021031
rosa_laevigata RLG00000015683 RLG00000018208 RLG00000018211 RLG00000018212
rosa_multiflora Rmu_co8137638.1_g000001 Rmu_sc0000742.1_g000006 Rmu_sc0004926.1_g000013 Rmu_sc0008355.1_g000010 Rmu_sc0011452.1_g000015 Rmu_ssc0000197.1_g000031 Rmu_ssc0000197.1_g000032 Rmu_ssc0000197.1_g000056
rosa_roxburghii Rroxscaffold_2G00127770 Rroxscaffold_2G00127780 Rroxscaffold_2G00127790 Rroxscaffold_2G00127830 Rroxscaffold_2G00127850 Rroxscaffold_2G00128630 Rroxscaffold_2G00128640 Rroxscaffold_2G00128680 Rroxscaffold_2G00128730 Rroxscaffold_2G00128740
rosa_rugosa Rorug01G0455200 Rorug01G0460100 Rorug02G0199800 Rorug02G0199900
rosa_samantha Rh2BG003000 Rh2BG267500 Rh2BG267700 Rh2BG267800 Rh2BG267900 Rh2CG003400 Rh2CG010000 Rh2CG262800 Rh2CG263200 Rh2CG263300 Rh2CG263400 Rh5CG165700 Rh5CG165800
rosa_wichuraiana Rw0G014320 Rw0G014330 Rw1G010220 Rw2G000800 Rw2G020110 Rw2G020130 Rw2G020150 Rw2G020160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 632
Acc65I GGTACC 1 cut(s) 1026
AccB1I GGYRCC 2 cut(s) 921, 1026
AcoI YGGCCR 4 cut(s) 63, 144, 209, 691
AcsI RAATTY 2 cut(s) 342, 1007
AcuI CTGAAG 1 cut(s) 249
AcyI GRCGYC 1 cut(s) 591
AfaI GTAC 3 cut(s) 781, 823, 1028
AfiI CCNNNNNNNGG 5 cut(s) 695, 733, 824, 825, 931
AgeI ACCGGT 1 cut(s) 620
AgsI TTSAA 5 cut(s) 205, 671, 868, 947, 1133
AjiI CACGTC 2 cut(s) 574, 958
AjnI CCWGG 4 cut(s) 273, 726, 907, 925
AluBI AGCT 5 cut(s) 31, 134, 1063, 1091, 1118
AluI AGCT 5 cut(s) 31, 134, 1063, 1091, 1118
Alw26I GTCTC 1 cut(s) 640
Ama87I CYCGRG 1 cut(s) 586
AoxI GGCC 8 cut(s) 63, 108, 126, 144, 209, 225, 381, 691
ApeKI GCWGC 3 cut(s) 501, 1082, 1098
ApoI RAATTY 2 cut(s) 342, 1007
ArsI GACNNNNNNTTYG 1 cut(s) 1129
AsiGI ACCGGT 1 cut(s) 620
Asp718I GGTACC 1 cut(s) 1026
AspLEI GCGC 1 cut(s) 401
AspS9I GGNCC 5 cut(s) 126, 225, 644, 686, 724
AsuC2I CCSGG 1 cut(s) 690
AsuHPI GGTGA 1 cut(s) 635
AvaI CYCGRG 1 cut(s) 586
AvaII GGWCC 3 cut(s) 644, 686, 724
BaeGI GKGCMC 1 cut(s) 926
BaeI ACNNNNGTAYC 2 cut(s) 1018, 1051
BanI GGYRCC 2 cut(s) 921, 1026
BarI GAAGNNNNNNTAC 4 cut(s) 805, 837, 1052, 1084
BbsI GAAGAC 1 cut(s) 820
BbvI GCAGC 3 cut(s) 488, 1094, 1110
BccI CCATC 6 cut(s) 80, 117, 236, 338, 557, 731
BceAI ACGGC 2 cut(s) 514, 994
BcgI CGANNNNNNTGC 2 cut(s) 238, 272
BciT130I CCWGG 4 cut(s) 275, 728, 909, 927
BclI TGATCA 1 cut(s) 892
BcnI CCSGG 1 cut(s) 690
BcoDI GTCTC 1 cut(s) 640
BfaI CTAG 1 cut(s) 1023
BfmI CTRYAG 2 cut(s) 45, 1015
BisI GCNGC 3 cut(s) 502, 1083, 1099
BlsI GCNGC 3 cut(s) 503, 1084, 1100
BmcAI AGTACT 1 cut(s) 823
Bme1390I CCNGG 5 cut(s) 275, 690, 728, 909, 927
Bme18I GGWCC 3 cut(s) 644, 686, 724
BmeT110I CYCGRG 1 cut(s) 586
BmgBI CACGTC 2 cut(s) 574, 958
BmgT120I GGNCC 5 cut(s) 126, 225, 644, 686, 724
BmiI GGNNCC 4 cut(s) 76, 688, 923, 1028
BmrFI CCNGG 5 cut(s) 275, 690, 728, 909, 927
BmrI ACTGGG 2 cut(s) 813, 834
BmuI ACTGGG 2 cut(s) 813, 834
BpiI GAAGAC 1 cut(s) 820
BpmI CTGGAG 2 cut(s) 440, 749
BpuMI CCSGG 1 cut(s) 690
BsaHI GRCGYC 1 cut(s) 591
BsaJI CCNNGG 8 cut(s) 105, 141, 153, 585, 694, 907, 925, 976
BsaWI WCCGGW 2 cut(s) 335, 620
Bsc4I CCNNNNNNNGG 5 cut(s) 695, 733, 824, 825, 931
Bse118I RCCGGY 3 cut(s) 207, 620, 1106
Bse1I ACTGG 7 cut(s) 302, 367, 402, 423, 819, 829, 1053
Bse3DI GCAATG 2 cut(s) 199, 240
BseBI CCWGG 4 cut(s) 275, 728, 909, 927
BseDI CCNNGG 8 cut(s) 105, 141, 153, 585, 694, 907, 925, 976
BseGI GGATG 5 cut(s) 128, 461, 742, 972, 1057
BseLI CCNNNNNNNGG 5 cut(s) 695, 733, 824, 825, 931
BseMI GCAATG 2 cut(s) 199, 240
BseMII CTCAG 2 cut(s) 785, 1078
BseNI ACTGG 7 cut(s) 302, 367, 402, 423, 819, 829, 1053
BseRI GAGGAG 2 cut(s) 41, 746
BseSI GKGCMC 1 cut(s) 926
BseXI GCAGC 3 cut(s) 488, 1094, 1110
BseYI CCCAGC 1 cut(s) 169
Bsh1285I CGRYCG 1 cut(s) 885
BshFI GGCC 8 cut(s) 65, 110, 128, 146, 211, 227, 383, 693
BshNI GGYRCC 2 cut(s) 921, 1026
BshTI ACCGGT 1 cut(s) 620
BsiEI CGRYCG 1 cut(s) 885
BsiHKCI CYCGRG 1 cut(s) 586
BsiSI CCGG 8 cut(s) 174, 208, 336, 387, 621, 647, 690, 1107
BslFI GGGAC 1 cut(s) 152
BslI CCNNNNNNNGG 5 cut(s) 695, 733, 824, 825, 931
BsmAI GTCTC 1 cut(s) 640
BsmFI GGGAC 1 cut(s) 152
BsnI GGCC 8 cut(s) 65, 110, 128, 146, 211, 227, 383, 693
BsoBI CYCGRG 1 cut(s) 586
Bsp1286I GDGCHC 1 cut(s) 926
Bsp143I GATC 3 cut(s) 882, 892, 1041
Bsp19I CCATGG 1 cut(s) 694
BspANI GGCC 8 cut(s) 65, 110, 128, 146, 211, 227, 383, 693
BspCNI CTCAG 2 cut(s) 786, 1077
BspLI GGNNCC 4 cut(s) 76, 688, 923, 1028
BspT107I GGYRCC 2 cut(s) 921, 1026
BsrDI GCAATG 2 cut(s) 199, 240
BsrFI RCCGGY 3 cut(s) 207, 620, 1106
BsrI ACTGG 7 cut(s) 302, 367, 402, 423, 819, 829, 1053
BssAI RCCGGY 3 cut(s) 207, 620, 1106
BssECI CCNNGG 8 cut(s) 105, 141, 153, 585, 694, 907, 925, 976
BssMI GATC 3 cut(s) 882, 892, 1041
BssNI GRCGYC 1 cut(s) 591
BssT1I CCWWGG 2 cut(s) 105, 694
Bst2UI CCWGG 4 cut(s) 275, 728, 909, 927
Bst4CI ACNGT 7 cut(s) 37, 49, 353, 632, 757, 766, 1016
Bst6I CTCTTC 1 cut(s) 18
BstACI GRCGYC 1 cut(s) 591
BstAPI GCANNNNNTGC 1 cut(s) 396
BstC8I GCNNGC 1 cut(s) 247
BstDEI CTNAG 4 cut(s) 609, 794, 834, 1064
BstDSI CCRYGG 2 cut(s) 694, 976
BstEII GGTNACC 1 cut(s) 325
BstENI CCTNNNNNAGG 1 cut(s) 731
BstF5I GGATG 5 cut(s) 128, 461, 742, 972, 1057
BstHHI GCGC 1 cut(s) 401
BstKTI GATC 3 cut(s) 885, 895, 1044
BstMAI GTCTC 1 cut(s) 640
BstMBI GATC 3 cut(s) 882, 892, 1041
BstMCI CGRYCG 1 cut(s) 885
BstMWI GCNNNNNNNGC 4 cut(s) 246, 396, 407, 1088
BstNI CCWGG 4 cut(s) 275, 728, 909, 927
BstNSI RCATGY 3 cut(s) 317, 684, 857
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 5 cut(s) 273, 688, 726, 907, 925
BstSFI CTRYAG 2 cut(s) 45, 1015
BstSLI GKGCMC 1 cut(s) 926
BstV1I GCAGC 3 cut(s) 488, 1094, 1110
BstV2I GAAGAC 1 cut(s) 820
BstXI CCANNNNNNTGG 1 cut(s) 1109
BsuRI GGCC 8 cut(s) 65, 110, 128, 146, 211, 227, 383, 693
BtgI CCRYGG 2 cut(s) 694, 976
BtrI CACGTC 2 cut(s) 574, 958
BtsCI GGATG 5 cut(s) 128, 461, 742, 972, 1057
BtsIMutI CAGTG 4 cut(s) 360, 409, 416, 1046
Cac8I GCNNGC 1 cut(s) 247
CfoI GCGC 1 cut(s) 401
Cfr10I RCCGGY 3 cut(s) 207, 620, 1106
Cfr13I GGNCC 5 cut(s) 126, 225, 644, 686, 724
CseI GACGC 1 cut(s) 580
CsiI ACCWGGT 1 cut(s) 273
Csp6I GTAC 3 cut(s) 780, 822, 1027
CspAI ACCGGT 1 cut(s) 620
CviAII CATG 9 cut(s) 213, 314, 681, 695, 807, 854, 862, 1095, 1103
CviQI GTAC 3 cut(s) 780, 822, 1027
DdeI CTNAG 4 cut(s) 609, 794, 834, 1064
DpnI GATC 3 cut(s) 884, 894, 1043
DpnII GATC 3 cut(s) 882, 892, 1041
DrdI GACNNNNNNGTC 1 cut(s) 632
DseDI GACNNNNNNGTC 1 cut(s) 632
EaeI YGGCCR 4 cut(s) 63, 144, 209, 691
Eam1104I CTCTTC 1 cut(s) 18
EarI CTCTTC 1 cut(s) 18
Eco130I CCWWGG 2 cut(s) 105, 694
Eco147I AGGCCT 2 cut(s) 110, 383
Eco47I GGWCC 3 cut(s) 644, 686, 724
Eco57I CTGAAG 1 cut(s) 249
Eco88I CYCGRG 1 cut(s) 586
Eco91I GGTNACC 1 cut(s) 325
EcoNI CCTNNNNNAGG 1 cut(s) 731
EcoO109I RGGNCCY 1 cut(s) 724
EcoO65I GGTNACC 1 cut(s) 325
EcoRI GAATTC 1 cut(s) 342
EcoRII CCWGG 4 cut(s) 273, 726, 907, 925
EcoT14I CCWWGG 2 cut(s) 105, 694
ErhI CCWWGG 2 cut(s) 105, 694
FaeI CATG 9 cut(s) 216, 317, 684, 698, 810, 857, 865, 1098, 1106
FaqI GGGAC 1 cut(s) 152
FatI CATG 9 cut(s) 212, 313, 680, 694, 806, 853, 861, 1094, 1102
FbaI TGATCA 1 cut(s) 892
Fnu4HI GCNGC 3 cut(s) 502, 1083, 1099
FokI GGATG 5 cut(s) 135, 448, 749, 959, 1064
Fsp4HI GCNGC 3 cut(s) 502, 1083, 1099
FspBI CTAG 1 cut(s) 1023
GlaI GCGC 1 cut(s) 400
GluI GCNGC 3 cut(s) 502, 1083, 1099
GsaI CCCAGC 1 cut(s) 173
GsuI CTGGAG 2 cut(s) 440, 749
HaeIII GGCC 8 cut(s) 65, 110, 128, 146, 211, 227, 383, 693
HapII CCGG 8 cut(s) 174, 208, 336, 387, 621, 647, 690, 1107
HgaI GACGC 1 cut(s) 580
HhaI GCGC 1 cut(s) 401
Hin1I GRCGYC 1 cut(s) 591
Hin1II CATG 9 cut(s) 216, 317, 684, 698, 810, 857, 865, 1098, 1106
Hin6I GCGC 1 cut(s) 399
HinP1I GCGC 1 cut(s) 399
HindIII AAGCTT 2 cut(s) 132, 1089
HinfI GANTC 5 cut(s) 98, 567, 605, 699, 798
HpaII CCGG 8 cut(s) 174, 208, 336, 387, 621, 647, 690, 1107
HphI GGTGA 1 cut(s) 635
Hpy166II GTNNAC 1 cut(s) 686
Hpy188I TCNGA 3 cut(s) 268, 795, 882
Hpy188III TCNNGA 5 cut(s) 120, 347, 448, 602, 939
Hpy8I GTNNAC 1 cut(s) 686
Hpy99I CGWCG 2 cut(s) 260, 680
HpyAV CCTTC 3 cut(s) 121, 171, 273
HpyCH4III ACNGT 7 cut(s) 37, 49, 353, 632, 757, 766, 1016
HpyCH4IV ACGT 4 cut(s) 233, 573, 675, 957
HpyCH4V TGCA 7 cut(s) 216, 378, 504, 520, 617, 745, 1098
HpyF10VI GCNNNNNNNGC 4 cut(s) 246, 396, 407, 1088
HpyF3I CTNAG 4 cut(s) 609, 794, 834, 1064
HpySE526I ACGT 4 cut(s) 233, 573, 675, 957
Hsp92I GRCGYC 1 cut(s) 591
Hsp92II CATG 9 cut(s) 216, 317, 684, 698, 810, 857, 865, 1098, 1106
HspAI GCGC 1 cut(s) 399
KpnI GGTACC 1 cut(s) 1030
Ksp22I TGATCA 1 cut(s) 892
Kzo9I GATC 3 cut(s) 882, 892, 1041
LmnI GCTCC 3 cut(s) 28, 74, 407
Lsp1109I GCAGC 3 cut(s) 488, 1094, 1110
MabI ACCWGGT 1 cut(s) 273
MaeI CTAG 1 cut(s) 1023
MaeII ACGT 4 cut(s) 233, 573, 675, 957
MalI GATC 3 cut(s) 884, 894, 1043
MboI GATC 3 cut(s) 882, 892, 1041
MboII GAAGA 2 cut(s) 35, 825
MfeI CAATTG 1 cut(s) 639
MhlI GDGCHC 1 cut(s) 926
MluCI AATT 5 cut(s) 342, 639, 898, 948, 1007
MlyI GAGTC 2 cut(s) 92, 599
MmeI TCCRAC 2 cut(s) 453, 874
MnlI CCTC 8 cut(s) 19, 151, 163, 394, 550, 595, 724, 727
MslI CAYNNNNRTG 3 cut(s) 318, 446, 1107
MspA1I CMGCKG 1 cut(s) 1118
MspI CCGG 8 cut(s) 174, 208, 336, 387, 621, 647, 690, 1107
MspR9I CCNGG 5 cut(s) 275, 690, 728, 909, 927
MunI CAATTG 1 cut(s) 639
MvaI CCWGG 4 cut(s) 275, 728, 909, 927
MwoI GCNNNNNNNGC 4 cut(s) 246, 396, 407, 1088
NciI CCSGG 1 cut(s) 690
NcoI CCATGG 1 cut(s) 694
NdeII GATC 3 cut(s) 882, 892, 1041
NlaIII CATG 9 cut(s) 216, 317, 684, 698, 810, 857, 865, 1098, 1106
NlaIV GGNNCC 4 cut(s) 76, 688, 923, 1028
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 7 cut(s) 49, 457, 545, 592, 623, 953, 958
NspI RCATGY 3 cut(s) 317, 684, 857
PceI AGGCCT 2 cut(s) 110, 383
PfeI GAWTC 3 cut(s) 567, 699, 798
PflFI GACNNNGTC 1 cut(s) 632
PinAI ACCGGT 1 cut(s) 620
PkrI GCNGC 3 cut(s) 503, 1084, 1100
Ple19I CGATCG 1 cut(s) 885
PleI GAGTC 2 cut(s) 92, 599
PpsI GAGTC 2 cut(s) 92, 599
PpuMI RGGWCCY 1 cut(s) 724
Psp5II RGGWCCY 1 cut(s) 724
Psp6I CCWGG 4 cut(s) 273, 726, 907, 925
PspEI GGTNACC 1 cut(s) 325
PspFI CCCAGC 1 cut(s) 169
PspGI CCWGG 4 cut(s) 273, 726, 907, 925
PspN4I GGNNCC 4 cut(s) 76, 688, 923, 1028
PspPI GGNCC 5 cut(s) 126, 225, 644, 686, 724
PspPPI RGGWCCY 1 cut(s) 724
PsyI GACNNNGTC 1 cut(s) 632
PvuI CGATCG 1 cut(s) 885
PvuII CAGCTG 1 cut(s) 1118
RsaI GTAC 3 cut(s) 781, 823, 1028
RsaNI GTAC 3 cut(s) 780, 822, 1027
RseI CAYNNNNRTG 3 cut(s) 318, 446, 1107
SatI GCNGC 3 cut(s) 502, 1083, 1099
Sau3AI GATC 3 cut(s) 882, 892, 1041
Sau96I GGNCC 5 cut(s) 126, 225, 644, 686, 724
ScaI AGTACT 1 cut(s) 823
SchI GAGTC 2 cut(s) 92, 599
ScrFI CCNGG 5 cut(s) 275, 690, 728, 909, 927
SduI GDGCHC 1 cut(s) 926
SexAI ACCWGGT 1 cut(s) 273
SfcI CTRYAG 2 cut(s) 45, 1015
SinI GGWCC 3 cut(s) 644, 686, 724
SmiMI CAYNNNNRTG 3 cut(s) 318, 446, 1107
Sse9I AATT 5 cut(s) 342, 639, 898, 948, 1007
SseBI AGGCCT 2 cut(s) 110, 383
SspMI CTAG 1 cut(s) 1023
StuI AGGCCT 2 cut(s) 110, 383
StyD4I CCNGG 5 cut(s) 273, 688, 726, 907, 925
StyI CCWWGG 2 cut(s) 105, 694
TaaI ACNGT 7 cut(s) 37, 49, 353, 632, 757, 766, 1016
TaiI ACGT 4 cut(s) 236, 576, 678, 960
TaqI TCGA 3 cut(s) 434, 603, 1011
TaqII GACCGA 1 cut(s) 145
TasI AATT 5 cut(s) 342, 639, 898, 948, 1007
TatI WGTACW 1 cut(s) 821
TfiI GAWTC 3 cut(s) 567, 699, 798
TscAI CASTG 4 cut(s) 367, 409, 423, 1053
TseFI GTSAC 7 cut(s) 49, 457, 545, 592, 623, 953, 958
TseI GCWGC 3 cut(s) 501, 1082, 1098
Tsp45I GTSAC 7 cut(s) 49, 457, 545, 592, 623, 953, 958
TspDTI ATGAA 2 cut(s) 36, 1083
TspRI CASTG 4 cut(s) 367, 409, 423, 1053
Tth111I GACNNNGTC 1 cut(s) 632
VpaK11BI GGWCC 3 cut(s) 644, 686, 724
XagI CCTNNNNNAGG 1 cut(s) 731
XapI RAATTY 2 cut(s) 342, 1007
XceI RCATGY 3 cut(s) 317, 684, 857
XspI CTAG 1 cut(s) 1023
ZrmI AGTACT 1 cut(s) 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.