Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0001528

Physical Location & Seq

Genomic Coordinates Forward (+)

5504760 .. 5512409

Gene Structure 7650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1067300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGCTAGGTTCCCACTTAAATCTGATAGCGCCGATTTCTCCTTCCCTCTGTCGACTCTCTTCCCTCCACCCCTCTCCTTCCCTCCCCGCCGCCGACTTGTTGAAGGCGGCATCTAGGAAGCTTATTTTTGCAGCTAAGTCCCACTCAGTATCCACAATGGCGACTGAAGAAGAGAATGTGGGAAATACAAAGCGACAGTTAGCGAAACTGTTTGAAGTCTCGCTCAGAAGAATAGTCCCCGATGAGCCAGATGTCGAGCCAGTGATTGCTGCTTGCACTGGGAAGTTTGGCGATTATCAATGTAACAATGCCATGGGTCTATGGTCTAAAGTAAAAGGAAAAGGCAGTGAGTTTAGGGGTCCGCCATCTGTGGGACAGGCAATCATGAAAAATCTTCCTGATTCGGAGATCATAGAATCGTGTTCTGTAGCAGGACCTGGATTTGTGAATGTTGTCTTGTCAAAGAAATGGTTGGCTAAGAGCATACAAAAGATGCTTACTGATGGCATCGATAAATGGGCGCCACAGCTTCCAATCAAAAGGGCTGTGGTTGACTTTTCCTCGCCTAATATAGCTAAAGAAATGCATGTGGGCCACTTAAGGTCAACTATTATTGGGGACACACTAGCTTGTATTCTGGAGTTTTCAAATGTTGAAGTTCTTCGACGAAATCATGTTGGTGACTGGGGGACACAGTTTGGTATGTTGATTGAGTTTCTTTTTGAAAAGTTCCCGAACATAGAAGATGTTAATGAAACAGCCATTGGTGATCTGCAGGCATTCTATAAAGCATCAAAACAGAGATTCGATGATGATCCTGCTTTTAAGGAGAGAGCACAACGGGCAGTGGTTTCCCTTCAGGGTGGTGAACTGAGGTACCGAAATGCATGGCTGAAGATCTGTGAAATCAGTCGTAAAGAATTTCACAAGGTCTATGAACGCCTTGGAGTTCATTTAGAGGAAAAGGGTGAGAGTTTTTATAACCCATATATTCCTGGGGTTTTAAAAGAATTGAGTGATAAAGGGTTAATTGAGGACAGCCAGGGTGCTCGTGTAATCTTTCTGGAAGGGTTTAACATCCCCCTTATTGTCGTCAAGAGCGATGGCGGTTTCAACTATGCTTCAACTGATTTAGCAGCTCTTTGGTATCGCCTGAATGAGGAGAAAGCTGATTGGATCATATATGTTACCGATGTTGGCCAGCAGCAGCATTTTAATATGTTTTTCGAGGCAGCTAAACGTGCAGGTTGGCTCCCAACTGATGGCGCCTTGAAACCAAAAGTTACTCATGTTGGTTTTGGTCTTGTTCTTGGAGAAGATGGAAAACGCTTTCGCACTCGCTCTAGTGAGGTGGTCCGATTGGTTGATTTGCTTGATGAAGCCAAGGATCGTAGTAAAAAGGTTCTTGTTGAACGTGGCTGGACAGAGCAGGAGCTTAATCAAATTGCAGAGGCTGTTGGTTACGGTGCTGTTAAGTATGCTGATCTGAAGAACAACAGATTGACCAATTACACGTTTGATTTTGATCAAATGCTAAGTGACAAGGGAAACACTGCTGTTTACTTGCTCTACGCTCATGCTCGGATCTGTTCCATCATAAGGAAATCTGGCAAAAACATAGAGGAATTGAAAAAAACGGGGGAAATTGTGTTGGATCATGACGGTGAGCGTGAATTGGGGCTTCATTTGCTACAGTTTTCAGAGAACGTGGAGGAGACCTGCACCAATCTATTGCCGAATGTTTTGTGCGAATACCTATACAATTTATCAGAAGTCTTCACCAAAAAATTCTACTCCAATTGCCAGGTTGTCGGGTCTCCTGAGGAAACGAGCAGACTCTTGCTTTGTGAAGCAACAGCCATTGTGATGAGGAAATGTTTTAATCTTCTCGGAATCGAACCGGTTTACAAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004814 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006420 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Arg_tRNA_synt_N DALR_1 tRNA-synt_1d

Protein Analysis

639

Amino Acids

71.53

Weight (kDa)

6.41

Isoelectric Point (pI)

44.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arg_tRNA_synt_N	PF03485	66 - 153	9.3e-15	Arginyl tRNA synthetase N terminal domain
tRNA-synt_1d	PF00750	180 - 508	2e-117	tRNA synthetases class I (R), catalytic domain
DALR_1	PF05746	522 - 637	2.9e-30	DALR anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66530 AT4G26300 AT4G26300 AT4G26300 AT4G26300 AT4G26300
fragaria_vesca	FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400
malus_domestica	MD02G1067300.v1.1 MD15G1198200.v1.1 MD15G1199100.v1.1
prunus_persica	Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1
pyrus_communis	pycom02g05330 pycom15g17660
rosa_chinensis	RchiOBHm_Chr2g0092141 RchiOBHm_Chr3g0454631 RchiOBHm_Chr3g0454641 RchiOBHm_Chr7g0215671
rosa_laevigata	RLG00000016278 RLG00000025428
rosa_multiflora	Rmu_co8501171.1_g000001 Rmu_sc0000898.1_g000026 Rmu_sc0001792.1_g000032 Rmu_sc0001792.1_g000033 Rmu_sc0013552.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149440 Rroxscaffold_3G00243930
rosa_rugosa	Rorug02G0023000 Rorug02G0023100 Rorug02G0023200 Rorug03G0000700 Rorug03G0000800 Rorug07G0156100
rosa_samantha	Rh2AG068800 Rh2BG068100 Rh2CG069300 Rh2DG067400 Rh3DG062300 Rh7AG292900 Rh7BG285300 Rh7CG313000 Rh7DG296400
rosa_wichuraiana	Rw2G006350 Rw7G024930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	981
Acc36I	ACCTGC	2 cut(s)	1235, 1727
Acc65I	GGTACC	1 cut(s)	876
AccB1I	GGYRCC	3 cut(s)	520, 876, 1265
AccB7I	CCANNNNNTGG	1 cut(s)	1262
AccI	GTMKAC	1 cut(s)	52
AciI	CCGC	5 cut(s)	87, 90, 107, 362, 1107
AclWI	GGATC	5 cut(s)	809, 1184, 1395, 1592, 1662
AcoI	YGGCCR	1 cut(s)	1198
AcsI	RAATTY	2 cut(s)	920, 1787
AcuI	CTGAAG	4 cut(s)	186, 842, 914, 1508
AcyI	GRCGYC	2 cut(s)	521, 1266
AfaI	GTAC	1 cut(s)	878
AfiI	CCNNNNNNNGG	4 cut(s)	371, 1159, 1262, 1599
AflII	CTTAAG	1 cut(s)	598
AflIII	ACRYGT	1 cut(s)	1512
AgeI	ACCGGT	1 cut(s)	1900
AjnI	CCWGG	4 cut(s)	436, 994, 1041, 1803
AjuI	GAANNNNNNNTTGG	2 cut(s)	747, 779
AluBI	AGCT	9 cut(s)	121, 134, 529, 575, 629, 1139, 1169, 1235, 1435
AluI	AGCT	9 cut(s)	121, 134, 529, 575, 629, 1139, 1169, 1235, 1435
Alw21I	GWGCWC	2 cut(s)	838, 1051
Alw26I	GTCTC	3 cut(s)	223, 1709, 1821
AlwI	GGATC	5 cut(s)	809, 1184, 1395, 1592, 1662
AlwNI	CAGNNNCTG	2 cut(s)	437, 1454
AoxI	GGCC	2 cut(s)	592, 1198
ApeKI	GCWGC	6 cut(s)	131, 269, 1136, 1204, 1207, 1232
ApoI	RAATTY	2 cut(s)	920, 1787
ArsI	GACNNNNNNTTYG	2 cut(s)	1827, 1859
AsiGI	ACCGGT	1 cut(s)	1900
Asp700I	GAANNNNTTC	1 cut(s)	660
Asp718I	GGTACC	1 cut(s)	876
AspLEI	GCGC	3 cut(s)	31, 523, 1268
AspS9I	GGNCC	4 cut(s)	359, 434, 592, 1354
AsuHPI	GGTGA	6 cut(s)	692, 779, 878, 980, 1676, 1771
AvaII	GGWCC	3 cut(s)	359, 434, 1354
AxyI	CCTNAGG	1 cut(s)	1821
BaeI	ACNNNNGTAYC	2 cut(s)	860, 893
BalI	TGGCCA	1 cut(s)	1200
BanI	GGYRCC	3 cut(s)	520, 876, 1265
BauI	CACGAG	1 cut(s)	1050
BbsI	GAAGAC	1 cut(s)	1768
Bbv12I	GWGCWC	2 cut(s)	838, 1051
BbvI	GCAGC	6 cut(s)	143, 256, 1148, 1216, 1219, 1244
BccI	CCATC	6 cut(s)	373, 497, 1097, 1256, 1313, 1601
BciT130I	CCWGG	4 cut(s)	438, 996, 1043, 1805
BciVI	GTATCC	1 cut(s)	160
BclI	TGATCA	1 cut(s)	1525
BcoDI	GTCTC	3 cut(s)	223, 1709, 1821
BfaI	CTAG	4 cut(s)	5, 114, 626, 1344
BfmI	CTRYAG	3 cut(s)	426, 773, 1691
BfoI	RGCGCY	3 cut(s)	32, 524, 1269
BfrI	CTTAAG	1 cut(s)	598
BfuAI	ACCTGC	2 cut(s)	1235, 1727
BfuI	GTATCC	1 cut(s)	160
BglII	AGATCT	1 cut(s)	897
BisI	GCNGC	8 cut(s)	90, 108, 132, 270, 1137, 1205, 1208, 1233
BlsI	GCNGC	8 cut(s)	91, 109, 133, 271, 1138, 1206, 1209, 1234
Bme1390I	CCNGG	4 cut(s)	438, 996, 1043, 1805
Bme18I	GGWCC	3 cut(s)	359, 434, 1354
BmgT120I	GGNCC	4 cut(s)	359, 434, 592, 1354
BmiI	GGNNCC	6 cut(s)	10, 360, 522, 878, 1253, 1267
BmrFI	CCNGG	4 cut(s)	438, 996, 1043, 1805
BmrI	ACTGGG	2 cut(s)	288, 694
BmsI	GCATC	4 cut(s)	119, 483, 516, 800
BmuI	ACTGGG	2 cut(s)	288, 694
BpiI	GAAGAC	1 cut(s)	1768
BpmI	CTGGAG	1 cut(s)	659
Bsa29I	ATCGAT	1 cut(s)	510
BsaBI	GATNNNNATC	2 cut(s)	813, 1524
BsaHI	GRCGYC	2 cut(s)	521, 1266
BsaI	GGTCTC	2 cut(s)	1709, 1821
BsaJI	CCNNGG	5 cut(s)	312, 943, 995, 1042, 1383
BsaWI	WCCGGW	1 cut(s)	1900
Bsc4I	CCNNNNNNNGG	4 cut(s)	371, 1159, 1262, 1599
Bse118I	RCCGGY	1 cut(s)	1900
Bse1I	ACTGG	3 cut(s)	260, 283, 689
Bse21I	CCTNAGG	1 cut(s)	1821
Bse8I	GATNNNNATC	2 cut(s)	813, 1524
BseBI	CCWGG	4 cut(s)	438, 996, 1043, 1805
BseCI	ATCGAT	1 cut(s)	510
BseDI	CCNNGG	5 cut(s)	312, 943, 995, 1042, 1383
BseGI	GGATG	1 cut(s)	1077
BseJI	GATNNNNATC	2 cut(s)	813, 1524
BseLI	CCNNNNNNNGG	4 cut(s)	371, 1159, 1262, 1599
BseMII	CTCAG	4 cut(s)	159, 238, 863, 1812
BseNI	ACTGG	3 cut(s)	260, 283, 689
BseRI	GAGGAG	2 cut(s)	1175, 1727
BseXI	GCAGC	6 cut(s)	143, 256, 1148, 1216, 1219, 1244
BsgI	GTGCAG	2 cut(s)	1263, 1705
BshFI	GGCC	2 cut(s)	594, 1200
BshNI	GGYRCC	3 cut(s)	520, 876, 1265
BshTI	ACCGGT	1 cut(s)	1900
BshVI	ATCGAT	1 cut(s)	510
BsiHKAI	GWGCWC	2 cut(s)	838, 1051
BsiSI	CCGG	1 cut(s)	1901
BslFI	GGGAC	5 cut(s)	124, 221, 387, 632, 703
BslI	CCNNNNNNNGG	4 cut(s)	371, 1159, 1262, 1599
BsmAI	GTCTC	3 cut(s)	223, 1709, 1821
BsmFI	GGGAC	5 cut(s)	124, 221, 387, 632, 703
BsmI	GAATGC	1 cut(s)	779
BsnI	GGCC	2 cut(s)	594, 1200
Bso31I	GGTCTC	2 cut(s)	1709, 1821
Bsp1286I	GDGCHC	2 cut(s)	838, 1051
Bsp19I	CCATGG	1 cut(s)	312
BspACI	CCGC	5 cut(s)	87, 90, 107, 362, 1107
BspANI	GGCC	2 cut(s)	594, 1200
BspCNI	CTCAG	4 cut(s)	158, 237, 864, 1813
BspDI	ATCGAT	1 cut(s)	510
BspHI	TCATGA	2 cut(s)	384, 1657
BspLI	GGNNCC	6 cut(s)	10, 360, 522, 878, 1253, 1267
BspMAI	CTGCAG	1 cut(s)	777
BspMI	ACCTGC	2 cut(s)	1235, 1727
BspPI	GGATC	5 cut(s)	809, 1184, 1395, 1592, 1662
BspT107I	GGYRCC	3 cut(s)	520, 876, 1265
BspTI	CTTAAG	1 cut(s)	598
BspTNI	GGTCTC	2 cut(s)	1709, 1821
BsrFI	RCCGGY	1 cut(s)	1900
BsrI	ACTGG	3 cut(s)	260, 283, 689
BssAI	RCCGGY	1 cut(s)	1900
BssECI	CCNNGG	5 cut(s)	312, 943, 995, 1042, 1383
BssNI	GRCGYC	2 cut(s)	521, 1266
BssSI	CACGAG	1 cut(s)	1050
BssT1I	CCWWGG	3 cut(s)	312, 943, 1383
Bst2BI	CACGAG	1 cut(s)	1050
Bst2UI	CCWGG	4 cut(s)	438, 996, 1043, 1805
Bst4CI	ACNGT	6 cut(s)	198, 210, 696, 1466, 1664, 1695
Bst6I	CTCTTC	2 cut(s)	64, 165
BstACI	GRCGYC	2 cut(s)	521, 1266
BstAFI	CTTAAG	1 cut(s)	598
BstC8I	GCNNGC	3 cut(s)	274, 777, 1202
BstDEI	CTNAG	7 cut(s)	135, 145, 224, 477, 872, 1535, 1821
BstDSI	CCRYGG	1 cut(s)	312
BstENI	CCTNNNNNAGG	1 cut(s)	1157
BstF5I	GGATG	1 cut(s)	1077
BstH2I	RGCGCY	3 cut(s)	32, 524, 1269
BstHHI	GCGC	3 cut(s)	31, 523, 1268
BstMAI	GTCTC	3 cut(s)	223, 1709, 1821
BstMWI	GCNNNNNNNGC	3 cut(s)	842, 1241, 1687
BstNI	CCWGG	4 cut(s)	438, 996, 1043, 1805
BstNSI	RCATGY	1 cut(s)	590
BstSCI	CCNGG	4 cut(s)	436, 994, 1041, 1803
BstSFI	CTRYAG	3 cut(s)	426, 773, 1691
BstV1I	GCAGC	6 cut(s)	143, 256, 1148, 1216, 1219, 1244
BstV2I	GAAGAC	1 cut(s)	1768
BstX2I	RGATCY	2 cut(s)	897, 1584
BstYI	RGATCY	2 cut(s)	897, 1584
Bsu15I	ATCGAT	1 cut(s)	510
Bsu36I	CCTNAGG	1 cut(s)	1821
BsuI	GTATCC	1 cut(s)	160
BsuRI	GGCC	2 cut(s)	594, 1200
BsuTUI	ATCGAT	1 cut(s)	510
BtgI	CCRYGG	1 cut(s)	312
BtgZI	GCGATG	1 cut(s)	1116
BtsCI	GGATG	1 cut(s)	1077
BtsI	GCAGTG	3 cut(s)	352, 852, 1551
BtsIMutI	CAGTG	5 cut(s)	267, 276, 352, 852, 1551
BveI	ACCTGC	2 cut(s)	1235, 1727
Cac8I	GCNNGC	3 cut(s)	274, 777, 1202
CaiI	CAGNNNCTG	2 cut(s)	437, 1454
CciI	TCATGA	2 cut(s)	384, 1657
CfoI	GCGC	3 cut(s)	31, 523, 1268
Cfr10I	RCCGGY	1 cut(s)	1900
Cfr13I	GGNCC	4 cut(s)	359, 434, 592, 1354
ClaI	ATCGAT	1 cut(s)	510
Csp6I	GTAC	1 cut(s)	877
CspAI	ACCGGT	1 cut(s)	1900
CviAII	CATG	8 cut(s)	313, 385, 587, 674, 888, 1289, 1577, 1658
CviQI	GTAC	1 cut(s)	877
DdeI	CTNAG	7 cut(s)	135, 145, 224, 477, 872, 1535, 1821
DinI	GGCGCC	2 cut(s)	522, 1267
DraI	TTTAAA	1 cut(s)	1005
EaeI	YGGCCR	1 cut(s)	1198
Eam1104I	CTCTTC	2 cut(s)	64, 165
EarI	CTCTTC	2 cut(s)	64, 165
EciI	GGCGGA	1 cut(s)	351
Eco130I	CCWWGG	3 cut(s)	312, 943, 1383
Eco31I	GGTCTC	2 cut(s)	1709, 1821
Eco47I	GGWCC	3 cut(s)	359, 434, 1354
Eco57I	CTGAAG	4 cut(s)	186, 842, 914, 1508
Eco81I	CCTNAGG	1 cut(s)	1821
EcoNI	CCTNNNNNAGG	1 cut(s)	1157
EcoO109I	RGGNCCY	1 cut(s)	434
EcoRII	CCWGG	4 cut(s)	436, 994, 1041, 1803
EcoT14I	CCWWGG	3 cut(s)	312, 943, 1383
EcoT22I	ATGCAT	2 cut(s)	588, 889
EgeI	GGCGCC	2 cut(s)	522, 1267
EheI	GGCGCC	2 cut(s)	522, 1267
ErhI	CCWWGG	3 cut(s)	312, 943, 1383
FaeI	CATG	8 cut(s)	316, 388, 590, 677, 891, 1292, 1580, 1661
FaqI	GGGAC	5 cut(s)	124, 221, 387, 632, 703
FatI	CATG	8 cut(s)	312, 384, 586, 673, 887, 1288, 1576, 1657
FauI	CCCGC	1 cut(s)	94
FbaI	TGATCA	1 cut(s)	1525
FblI	GTMKAC	1 cut(s)	52
Fnu4HI	GCNGC	8 cut(s)	90, 108, 132, 270, 1137, 1205, 1208, 1233
FokI	GGATG	1 cut(s)	1064
Fsp4HI	GCNGC	8 cut(s)	90, 108, 132, 270, 1137, 1205, 1208, 1233
FspBI	CTAG	4 cut(s)	5, 114, 626, 1344
GlaI	GCGC	3 cut(s)	30, 522, 1267
GluI	GCNGC	8 cut(s)	90, 108, 132, 270, 1137, 1205, 1208, 1233
GsuI	CTGGAG	1 cut(s)	659
HaeII	RGCGCY	3 cut(s)	32, 524, 1269
HaeIII	GGCC	2 cut(s)	594, 1200
HapII	CCGG	1 cut(s)	1901
HhaI	GCGC	3 cut(s)	31, 523, 1268
Hin1I	GRCGYC	2 cut(s)	521, 1266
Hin1II	CATG	8 cut(s)	316, 388, 590, 677, 891, 1292, 1580, 1661
Hin6I	GCGC	3 cut(s)	29, 521, 1266
HinP1I	GCGC	3 cut(s)	29, 521, 1266
HincII	GTYRAC	3 cut(s)	53, 553, 606
HindII	GTYRAC	3 cut(s)	53, 553, 606
HindIII	AAGCTT	1 cut(s)	119
HinfI	GANTC	6 cut(s)	54, 401, 416, 804, 1836, 1893
HpaII	CCGG	1 cut(s)	1901
HphI	GGTGA	6 cut(s)	692, 779, 878, 980, 1676, 1771
Hpy166II	GTNNAC	6 cut(s)	53, 553, 606, 869, 1561, 1906
Hpy188I	TCNGA	9 cut(s)	24, 227, 406, 1358, 1488, 1584, 1702, 1771, 1892
Hpy188III	TCNNGA	8 cut(s)	385, 398, 638, 733, 1064, 1096, 1658, 1820
Hpy8I	GTNNAC	6 cut(s)	53, 553, 606, 869, 1561, 1906
Hpy99I	CGWCG	1 cut(s)	669
HpyAV	CCTTC	5 cut(s)	51, 87, 97, 866, 1061
HpyCH4III	ACNGT	6 cut(s)	198, 210, 696, 1466, 1664, 1695
HpyCH4IV	ACGT	4 cut(s)	1240, 1414, 1514, 1707
HpyCH4V	TGCA	8 cut(s)	131, 276, 586, 775, 887, 1244, 1448, 1722
HpyF10VI	GCNNNNNNNGC	3 cut(s)	842, 1241, 1687
HpyF3I	CTNAG	7 cut(s)	135, 145, 224, 477, 872, 1535, 1821
HpySE526I	ACGT	4 cut(s)	1240, 1414, 1514, 1707
Hsp92I	GRCGYC	2 cut(s)	521, 1266
Hsp92II	CATG	8 cut(s)	316, 388, 590, 677, 891, 1292, 1580, 1661
HspAI	GCGC	3 cut(s)	29, 521, 1266
KasI	GGCGCC	2 cut(s)	520, 1265
KpnI	GGTACC	1 cut(s)	880
Ksp22I	TGATCA	1 cut(s)	1525
LmnI	GCTCC	2 cut(s)	1257, 1432
Lsp1109I	GCAGC	6 cut(s)	143, 256, 1148, 1216, 1219, 1244
LweI	GCATC	4 cut(s)	119, 483, 516, 800
MaeI	CTAG	4 cut(s)	5, 114, 626, 1344
MaeII	ACGT	4 cut(s)	1240, 1414, 1514, 1707
MaeIII	GTNAC	6 cut(s)	302, 680, 1186, 1282, 1460, 1538
MfeI	CAATTG	1 cut(s)	1798
MflI	RGATCY	2 cut(s)	897, 1584
MhlI	GDGCHC	2 cut(s)	838, 1051
MlsI	TGGCCA	1 cut(s)	1200
MluNI	TGGCCA	1 cut(s)	1200
Mly113I	GGCGCC	2 cut(s)	521, 1266
MlyI	GAGTC	2 cut(s)	48, 1830
MmeI	TCCRAC	1 cut(s)	1632
Mox20I	TGGCCA	1 cut(s)	1200
Mph1103I	ATGCAT	2 cut(s)	588, 889
MroXI	GAANNNNTTC	1 cut(s)	660
MscI	TGGCCA	1 cut(s)	1200
MslI	CAYNNNNRTG	3 cut(s)	678, 1662, 1865
Msp20I	TGGCCA	1 cut(s)	1200
MspCI	CTTAAG	1 cut(s)	598
MspI	CCGG	1 cut(s)	1901
MspR9I	CCNGG	4 cut(s)	438, 996, 1043, 1805
MunI	CAATTG	1 cut(s)	1798
Mva1269I	GAATGC	1 cut(s)	779
MvaI	CCWGG	4 cut(s)	438, 996, 1043, 1805
MwoI	GCNNNNNNNGC	3 cut(s)	842, 1241, 1687
NarI	GGCGCC	2 cut(s)	521, 1266
NcoI	CCATGG	1 cut(s)	312
NlaIII	CATG	8 cut(s)	316, 388, 590, 677, 891, 1292, 1580, 1661
NlaIV	GGNNCC	6 cut(s)	10, 360, 522, 878, 1253, 1267
NmuCI	GTSAC	2 cut(s)	680, 1538
NsiI	ATGCAT	2 cut(s)	588, 889
NspI	RCATGY	1 cut(s)	590
PagI	TCATGA	2 cut(s)	384, 1657
PcsI	WCGNNNNNNNCGW	1 cut(s)	1098
PctI	GAATGC	1 cut(s)	779
PdmI	GAANNNNTTC	1 cut(s)	660
PfeI	GAWTC	4 cut(s)	401, 416, 804, 1893
PflMI	CCANNNNNTGG	1 cut(s)	1262
PinAI	ACCGGT	1 cut(s)	1900
PkrI	GCNGC	8 cut(s)	91, 109, 133, 271, 1138, 1206, 1209, 1234
PleI	GAGTC	2 cut(s)	48, 1830
PluTI	GGCGCC	2 cut(s)	524, 1269
PpsI	GAGTC	2 cut(s)	48, 1830
PpuMI	RGGWCCY	1 cut(s)	434
PsiI	TTATAA	1 cut(s)	981
Psp5II	RGGWCCY	1 cut(s)	434
Psp6I	CCWGG	4 cut(s)	436, 994, 1041, 1803
PspGI	CCWGG	4 cut(s)	436, 994, 1041, 1803
PspN4I	GGNNCC	6 cut(s)	10, 360, 522, 878, 1253, 1267
PspPI	GGNCC	4 cut(s)	359, 434, 592, 1354
PspPPI	RGGWCCY	1 cut(s)	434
PstI	CTGCAG	1 cut(s)	777
PstNI	CAGNNNCTG	2 cut(s)	437, 1454
PsuI	RGATCY	2 cut(s)	897, 1584
RsaI	GTAC	1 cut(s)	878
RsaNI	GTAC	1 cut(s)	877
RseI	CAYNNNNRTG	3 cut(s)	678, 1662, 1865
SalI	GTCGAC	1 cut(s)	51
SatI	GCNGC	8 cut(s)	90, 108, 132, 270, 1137, 1205, 1208, 1233
Sau96I	GGNCC	4 cut(s)	359, 434, 592, 1354
SchI	GAGTC	2 cut(s)	48, 1830
ScrFI	CCNGG	4 cut(s)	438, 996, 1043, 1805
SduI	GDGCHC	2 cut(s)	838, 1051
SfaNI	GCATC	4 cut(s)	119, 483, 516, 800
SfcI	CTRYAG	3 cut(s)	426, 773, 1691
SfoI	GGCGCC	2 cut(s)	522, 1267
SinI	GGWCC	3 cut(s)	359, 434, 1354
SmiMI	CAYNNNNRTG	3 cut(s)	678, 1662, 1865
SmlI	CTYRAG	1 cut(s)	598
SmoI	CTYRAG	1 cut(s)	598
SsiI	CCGC	5 cut(s)	87, 90, 107, 362, 1107
SspDI	GGCGCC	2 cut(s)	520, 1265
SspMI	CTAG	4 cut(s)	5, 114, 626, 1344
StyD4I	CCNGG	4 cut(s)	436, 994, 1041, 1803
StyI	CCWWGG	3 cut(s)	312, 943, 1383
TaaI	ACNGT	6 cut(s)	198, 210, 696, 1466, 1664, 1695
TaiI	ACGT	4 cut(s)	1243, 1417, 1517, 1710
TaqI	TCGA	7 cut(s)	52, 255, 510, 664, 807, 1227, 1896
TauI	GCSGC	2 cut(s)	92, 110
TfiI	GAWTC	4 cut(s)	401, 416, 804, 1893
TscAI	CASTG	5 cut(s)	267, 283, 352, 852, 1558
TseFI	GTSAC	2 cut(s)	680, 1538
TseI	GCWGC	6 cut(s)	131, 269, 1136, 1204, 1207, 1232
Tsp45I	GTSAC	2 cut(s)	680, 1538
TspDTI	ATGAA	6 cut(s)	401, 768, 941, 951, 1392, 1673
TspRI	CASTG	5 cut(s)	267, 283, 352, 852, 1558
Van91I	CCANNNNNTGG	1 cut(s)	1262
Vha464I	CTTAAG	1 cut(s)	598
VpaK11BI	GGWCC	3 cut(s)	359, 434, 1354
XagI	CCTNNNNNAGG	1 cut(s)	1157
XapI	RAATTY	2 cut(s)	920, 1787
XceI	RCATGY	1 cut(s)	590
XmiI	GTMKAC	1 cut(s)	52
XmnI	GAANNNNTTC	1 cut(s)	660
XspI	CTAG	4 cut(s)	5, 114, 626, 1344
Zsp2I	ATGCAT	2 cut(s)	588, 889

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.