Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001528

Physical Location & Seq

Genomic Coordinates Reverse (-)

87002751 .. 87009200

Gene Structure 6450 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00149440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCAGCTGGAGGAGAGAATGTGGCGAGTTTGAAGCGGCAGTTAGGGCAGCTGTTTGAAGTTTCGATTAGGGCAGTGGTGCCTGGTGAGCTGAATGTGGAGCCAGCGGTTGTTCCGTCGGCTGGGAAATTCGGAGACTATCAATGTAACAATGCCATGGACATATGGTCTAAGATTAAGGGAAAGGGAACTGAATTCAAGAATCCTAATTCTGTTGGACAGGCCATCATGGGAAATCTTCCTAAGTCAGAAATAATAGAGTCATGCACGGTAGCAGGGCCTGGGTTTGTTAATATTGTGTTGTCAAAGAATTGGATGGCTAAGAGCTTACAAAAGATGCTTATTGATGGGATTGAAACATGGGCACCACAGCTCCAGGTCAGACGGGCTGTTGTAGACTTTTCCTCACCTAATATTGCCAAGGAGATGCATGTTGGCCATTTGCGATCTACAATTATCGGGGACACCCTAGCCCGGATGCTTGAGTTTTCCAAAGTTGAAGTTCTTCGGCGTAATCATGTTGGTGACTGGGGAACACAGTTTGGCATGTTGATTCAATACCTTTTCGAAAAGTTTCCAAACGTGGATGACGTAAATGAAATGGAAATCGGTGATCTTCAGGAATTCTATAAGCAATCAAAAAAGAGATTTGATGAGGATCCGGCCTTCAAGGAGAGAGCACAAGCTGCAGTGGTATCCCTTCAGGGTGGGACTCCCAAGTACCGTGAGGCATGGCTTCAAATCTGTGAAGTCAGCCGTAGAGAGTTTCAAATGGTCTATGAACGGCTTGGAACTCATTTAGAGGAAAAGGGAGAAAGCTTTTATAACCCATATATTCCTGCGGTTTTAGAGAAGTTGACTGACCAAGGACTGATTGTGGAAAGCGAGGGTGCTCGTGTAATCCATCTTGATGGTTTTAACATCCCCCTTATTGTTGTGAAGAGCAATGGCAGTTATAATTATGCTTCCACTGATTTGGCAGCTCTTTGGTATCGACTTAATGAGGAGAAAGCTGAATGGATCATATATGTTACTGATGTTGGCCAGCAGCAACACTTTAATATGTTTTTCAAGGCAGCTACACTCGCAGGTTGGCTTCCAGTTGATGGCTCGTACCCTAAAGTTAGCCATGTTGGTTTTGGTCTTGTTCTTGGAGAAGATGGCAAACGATTCCGGACTCGCTCTTCTGATGTGGTTCGATTGGTTGATTTACTTGATGAAGCCAAGAGCCGAAGCAAAACAAGTCTTGTCGAGCGTGGTAAGAGTGAAGACTGGACTGAAGAGGAGCTTGAGCAAACTGCAGTAGCCGTTGGTTATGGCGCTGTGAAGTATGCTGATCTGAAGAACAACAGATTGACCAATTACACTTTTGATTTCAATCAAATGCTAAATGATAAGGGAAACACTGCTGTTTACTTGCTATACATGCATGCTCGGATCTGTTCAATCATAAGGAAATCTGGCAAAGACATTGACGAATTGAAAAAAAAGGGGGAAATTGTGTTGGGTCAGGCGGGTGAGCGTGAATTGGCGCTTCACTTGTTAAAGTTTTCGGAGACTGTGGAGGAGGCTTGCACGAATCTGTTGCCAAGTGTTTTATGTGAATACCTCTATAATCTATCAGAAATCTACAGCGGAAAATTCTATTCCAATTGCCAGGTTATTGGGTCGGCAGAGGAAACGAGTAGACTCTTGCTTTGTGAAGCAACAGGCGTAGTCATGAGAAAATGCTTTCATCTTCTCGGAATTGAAGCCGTGTACAAGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004814 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006420 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Arg_tRNA_synt_N DALR_1 tRNA-synt_1d

Protein Analysis

589

Amino Acids

66.19

Weight (kDa)

5.77

Isoelectric Point (pI)

40.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arg_tRNA_synt_N	PF03485	17 - 101	2.5e-15	Arginyl tRNA synthetase N terminal domain
tRNA-synt_1d	PF00750	125 - 459	7.9e-118	tRNA synthetases class I (R), catalytic domain
DALR_1	PF05746	473 - 589	2.1e-29	DALR anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66530 AT4G26300 AT4G26300 AT4G26300 AT4G26300 AT4G26300
fragaria_vesca	FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400
malus_domestica	MD02G1067300.v1.1 MD15G1198200.v1.1 MD15G1199100.v1.1
prunus_persica	Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1
pyrus_communis	pycom02g05330 pycom15g17660
rosa_chinensis	RchiOBHm_Chr2g0092141 RchiOBHm_Chr3g0454631 RchiOBHm_Chr3g0454641 RchiOBHm_Chr7g0215671
rosa_laevigata	RLG00000016278 RLG00000025428
rosa_multiflora	Rmu_co8501171.1_g000001 Rmu_sc0000898.1_g000026 Rmu_sc0001792.1_g000032 Rmu_sc0001792.1_g000033 Rmu_sc0013552.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149440 Rroxscaffold_3G00243930
rosa_rugosa	Rorug02G0023000 Rorug02G0023100 Rorug02G0023200 Rorug03G0000700 Rorug03G0000800 Rorug07G0156100
rosa_samantha	Rh2AG068800 Rh2BG068100 Rh2CG069300 Rh2DG067400 Rh3DG062300 Rh7AG292900 Rh7BG285300 Rh7CG313000 Rh7DG296400
rosa_wichuraiana	Rw2G006350 Rw7G024930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	825, 957
Acc36I	ACCTGC	1 cut(s)	1079
AccB1I	GGYRCC	2 cut(s)	79, 364
AccB7I	CCANNNNNTGG	1 cut(s)	1106
AccI	GTMKAC	2 cut(s)	396, 1687
AccIII	TCCGGA	1 cut(s)	1173
AciI	CCGC	5 cut(s)	37, 107, 842, 1514, 1635
AclWI	GGATC	4 cut(s)	653, 666, 1028, 1445
AcoI	YGGCCR	2 cut(s)	436, 1042
AcsI	RAATTY	4 cut(s)	128, 194, 623, 1640
AcuI	CTGAAG	4 cut(s)	602, 686, 1299, 1361
AfaI	GTAC	3 cut(s)	722, 1115, 1760
AfiI	CCNNNNNNNGG	3 cut(s)	122, 474, 1106
AhdI	GACNNNNNGTC	1 cut(s)	166
AjnI	CCWGG	4 cut(s)	82, 280, 375, 1656
Alw21I	GWGCWC	2 cut(s)	682, 895
Alw26I	GTCTC	2 cut(s)	129, 1550
AlwI	GGATC	4 cut(s)	653, 666, 1028, 1445
AlwNI	CAGNNNCTG	1 cut(s)	281
Aor13HI	TCCGGA	1 cut(s)	1173
AoxI	GGCC	5 cut(s)	222, 278, 436, 663, 1042
ApeKI	GCWGC	6 cut(s)	5, 49, 686, 980, 1048, 1076
ApoI	RAATTY	4 cut(s)	128, 194, 623, 1640
ArsI	GACNNNNNNTTYG	2 cut(s)	1680, 1712
Asp700I	GAANNNNTTC	2 cut(s)	504, 573
AspLEI	GCGC	2 cut(s)	1322, 1534
AspS9I	GGNCC	1 cut(s)	278
AsuC2I	CCSGG	1 cut(s)	475
AsuHPI	GGTGA	5 cut(s)	98, 399, 536, 623, 1529
AsuII	TTCGAA	1 cut(s)	567
BaeGI	GKGCMC	1 cut(s)	367
BalI	TGGCCA	2 cut(s)	438, 1044
BamHI	GGATCC	1 cut(s)	658
BanI	GGYRCC	2 cut(s)	79, 364
BauI	CACGAG	1 cut(s)	894
BbsI	GAAGAC	1 cut(s)	1275
Bbv12I	GWGCWC	2 cut(s)	682, 895
BbvI	GCAGC	6 cut(s)	17, 61, 673, 992, 1060, 1088
BccI	CCATC	7 cut(s)	233, 310, 341, 905, 912, 1100, 1154
BceAI	ACGGC	4 cut(s)	741, 800, 1292, 1739
BcgI	CGANNNNNNTGC	2 cut(s)	1567, 1601
BciT130I	CCWGG	4 cut(s)	84, 282, 377, 1658
BciVI	GTATCC	1 cut(s)	706
BcnI	CCSGG	1 cut(s)	475
BcoDI	GTCTC	2 cut(s)	129, 1550
BfaI	CTAG	1 cut(s)	470
BfmI	CTRYAG	3 cut(s)	687, 1299, 1630
BfoI	RGCGCY	2 cut(s)	1323, 1535
BfuAI	ACCTGC	1 cut(s)	1079
BfuI	GTATCC	1 cut(s)	706
BisI	GCNGC	7 cut(s)	6, 38, 50, 687, 981, 1049, 1077
BlsI	GCNGC	7 cut(s)	7, 39, 51, 688, 982, 1050, 1078
Bme1390I	CCNGG	5 cut(s)	84, 282, 377, 475, 1658
BmeRI	GACNNNNNGTC	1 cut(s)	166
BmgT120I	GGNCC	1 cut(s)	278
BmiI	GGNNCC	4 cut(s)	81, 102, 366, 660
BmrFI	CCNGG	5 cut(s)	84, 282, 377, 475, 1658
BmrI	ACTGGG	1 cut(s)	538
BmsI	GCATC	3 cut(s)	327, 417, 468
BmuI	ACTGGG	1 cut(s)	538
BpiI	GAAGAC	1 cut(s)	1275
BpmI	CTGGAG	2 cut(s)	30, 359
Bpu14I	TTCGAA	1 cut(s)	567
BpuEI	CTTGAG	2 cut(s)	503, 1310
BpuMI	CCSGG	1 cut(s)	475
BsaBI	GATNNNNATC	2 cut(s)	657, 1377
BsaJI	CCNNGG	4 cut(s)	156, 281, 420, 865
BsaWI	WCCGGW	1 cut(s)	1173
BsaXI	ACNNNNNCTCC	4 cut(s)	6, 36, 357, 387
Bsc4I	CCNNNNNNNGG	3 cut(s)	122, 474, 1106
Bse1I	ACTGG	3 cut(s)	533, 1100, 1277
Bse3DI	GCAATG	1 cut(s)	952
Bse8I	GATNNNNATC	2 cut(s)	657, 1377
BseAI	TCCGGA	1 cut(s)	1173
BseBI	CCWGG	4 cut(s)	84, 282, 377, 1658
BseDI	CCNNGG	4 cut(s)	156, 281, 420, 865
BseGI	GGATG	4 cut(s)	321, 483, 592, 921
BseJI	GATNNNNATC	2 cut(s)	657, 1377
BseLI	CCNNNNNNNGG	3 cut(s)	122, 474, 1106
BseMI	GCAATG	1 cut(s)	952
BseNI	ACTGG	3 cut(s)	533, 1100, 1277
BseRI	GAGGAG	4 cut(s)	27, 1019, 1298, 1580
BseSI	GKGCMC	1 cut(s)	367
BseXI	GCAGC	6 cut(s)	17, 61, 673, 992, 1060, 1088
BseYI	CCCAGC	1 cut(s)	122
BshFI	GGCC	5 cut(s)	224, 280, 438, 665, 1044
BshNI	GGYRCC	2 cut(s)	79, 364
BsiHKAI	GWGCWC	2 cut(s)	682, 895
BsiSI	CCGG	3 cut(s)	475, 662, 1174
BslFI	GGGAC	2 cut(s)	476, 724
BslI	CCNNNNNNNGG	3 cut(s)	122, 474, 1106
BsmAI	GTCTC	2 cut(s)	129, 1550
BsmFI	GGGAC	2 cut(s)	476, 724
BsnI	GGCC	5 cut(s)	224, 280, 438, 665, 1044
Bsp119I	TTCGAA	1 cut(s)	567
Bsp1286I	GDGCHC	3 cut(s)	367, 682, 895
Bsp13I	TCCGGA	1 cut(s)	1173
Bsp1407I	TGTACA	1 cut(s)	1758
Bsp143I	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
Bsp19I	CCATGG	1 cut(s)	156
BspACI	CCGC	5 cut(s)	37, 107, 842, 1514, 1635
BspANI	GGCC	5 cut(s)	224, 280, 438, 665, 1044
BspEI	TCCGGA	1 cut(s)	1173
BspHI	TCATGA	1 cut(s)	1719
BspLI	GGNNCC	4 cut(s)	81, 102, 366, 660
BspMAI	CTGCAG	2 cut(s)	691, 1303
BspMI	ACCTGC	1 cut(s)	1079
BspPI	GGATC	4 cut(s)	653, 666, 1028, 1445
BspQI	GCTCTTC	2 cut(s)	935, 1189
BspT104I	TTCGAA	1 cut(s)	567
BspT107I	GGYRCC	2 cut(s)	79, 364
BsrDI	GCAATG	1 cut(s)	952
BsrGI	TGTACA	1 cut(s)	1758
BsrI	ACTGG	3 cut(s)	533, 1100, 1277
BssECI	CCNNGG	4 cut(s)	156, 281, 420, 865
BssMI	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
BssSI	CACGAG	1 cut(s)	894
BssT1I	CCWWGG	3 cut(s)	156, 420, 865
Bst2BI	CACGAG	1 cut(s)	894
Bst2UI	CCWGG	4 cut(s)	84, 282, 377, 1658
Bst4CI	ACNGT	4 cut(s)	271, 540, 725, 1561
Bst6I	CTCTTC	3 cut(s)	935, 1189, 1275
BstAPI	GCANNNNNTGC	1 cut(s)	686
BstAUI	TGTACA	1 cut(s)	1758
BstBI	TTCGAA	1 cut(s)	567
BstC8I	GCNNGC	4 cut(s)	105, 1046, 1431, 1573
BstDEI	CTNAG	3 cut(s)	171, 243, 321
BstDSI	CCRYGG	1 cut(s)	156
BstF5I	GGATG	4 cut(s)	321, 483, 592, 921
BstH2I	RGCGCY	2 cut(s)	1323, 1535
BstHHI	GCGC	2 cut(s)	1322, 1534
BstKTI	GATC	6 cut(s)	449, 616, 661, 1023, 1339, 1440
BstMAI	GTCTC	2 cut(s)	129, 1550
BstMBI	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
BstMWI	GCNNNNNNNGC	5 cut(s)	46, 88, 686, 1085, 1426
BstNI	CCWGG	4 cut(s)	84, 282, 377, 1658
BstNSI	RCATGY	4 cut(s)	434, 550, 1429, 1433
BstSCI	CCNGG	5 cut(s)	82, 280, 375, 473, 1656
BstSFI	CTRYAG	3 cut(s)	687, 1299, 1630
BstSLI	GKGCMC	1 cut(s)	367
BstV1I	GCAGC	6 cut(s)	17, 61, 673, 992, 1060, 1088
BstV2I	GAAGAC	1 cut(s)	1275
BstX2I	RGATCY	2 cut(s)	658, 1437
BstXI	CCANNNNNNTGG	3 cut(s)	911, 976, 1664
BstYI	RGATCY	2 cut(s)	658, 1437
BsuI	GTATCC	1 cut(s)	706
BsuRI	GGCC	5 cut(s)	224, 280, 438, 665, 1044
BtgI	CCRYGG	1 cut(s)	156
BtsCI	GGATG	4 cut(s)	321, 483, 592, 921
BtsI	GCAGTG	3 cut(s)	81, 696, 1404
BtsIMutI	CAGTG	4 cut(s)	81, 696, 969, 1404
BveI	ACCTGC	1 cut(s)	1079
Cac8I	GCNNGC	4 cut(s)	105, 1046, 1431, 1573
CaiI	CAGNNNCTG	1 cut(s)	281
CciI	TCATGA	1 cut(s)	1719
CfoI	GCGC	2 cut(s)	1322, 1534
Cfr13I	GGNCC	1 cut(s)	278
Csp6I	GTAC	3 cut(s)	721, 1114, 1759
CviQI	GTAC	3 cut(s)	721, 1114, 1759
DdeI	CTNAG	3 cut(s)	171, 243, 321
DpnI	GATC	6 cut(s)	448, 615, 660, 1022, 1338, 1439
DpnII	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
DriI	GACNNNNNGTC	1 cut(s)	166
EaeI	YGGCCR	2 cut(s)	436, 1042
Eam1104I	CTCTTC	3 cut(s)	935, 1189, 1275
Eam1105I	GACNNNNNGTC	1 cut(s)	166
EarI	CTCTTC	3 cut(s)	935, 1189, 1275
Eco130I	CCWWGG	3 cut(s)	156, 420, 865
Eco57I	CTGAAG	4 cut(s)	602, 686, 1299, 1361
EcoO109I	RGGNCCY	1 cut(s)	278
EcoRI	GAATTC	2 cut(s)	194, 623
EcoRII	CCWGG	4 cut(s)	82, 280, 375, 1656
EcoT14I	CCWWGG	3 cut(s)	156, 420, 865
EcoT22I	ATGCAT	2 cut(s)	432, 1431
ErhI	CCWWGG	3 cut(s)	156, 420, 865
FalI	AAGNNNNNCTT	2 cut(s)	1272, 1304
FaqI	GGGAC	2 cut(s)	476, 724
FauI	CCCGC	1 cut(s)	1507
FauNDI	CATATG	1 cut(s)	164
FblI	GTMKAC	2 cut(s)	396, 1687
Fnu4HI	GCNGC	7 cut(s)	6, 38, 50, 687, 981, 1049, 1077
FokI	GGATG	4 cut(s)	328, 490, 599, 908
Fsp4HI	GCNGC	7 cut(s)	6, 38, 50, 687, 981, 1049, 1077
FspBI	CTAG	1 cut(s)	470
GlaI	GCGC	2 cut(s)	1321, 1533
GluI	GCNGC	7 cut(s)	6, 38, 50, 687, 981, 1049, 1077
GsaI	CCCAGC	1 cut(s)	126
GsuI	CTGGAG	2 cut(s)	30, 359
HaeII	RGCGCY	2 cut(s)	1323, 1535
HaeIII	GGCC	5 cut(s)	224, 280, 438, 665, 1044
HapII	CCGG	3 cut(s)	475, 662, 1174
HhaI	GCGC	2 cut(s)	1322, 1534
Hin6I	GCGC	2 cut(s)	1320, 1532
HinP1I	GCGC	2 cut(s)	1320, 1532
HincII	GTYRAC	1 cut(s)	858
HindII	GTYRAC	1 cut(s)	858
HindIII	AAGCTT	1 cut(s)	817
HinfI	GANTC	8 cut(s)	202, 260, 553, 712, 1170, 1177, 1579, 1689
HpaII	CCGG	3 cut(s)	475, 662, 1174
HphI	GGTGA	5 cut(s)	98, 399, 536, 623, 1529
Hpy166II	GTNNAC	5 cut(s)	397, 858, 1414, 1688, 1759
Hpy188I	TCNGA	9 cut(s)	134, 250, 383, 1189, 1341, 1437, 1555, 1624, 1745
Hpy188III	TCNNGA	5 cut(s)	199, 620, 908, 1174, 1720
Hpy8I	GTNNAC	5 cut(s)	397, 858, 1414, 1688, 1759
Hpy99I	CGWCG	1 cut(s)	121
HpyAV	CCTTC	2 cut(s)	676, 710
HpyCH4III	ACNGT	4 cut(s)	271, 540, 725, 1561
HpyCH4IV	ACGT	2 cut(s)	582, 591
HpyCH4V	TGCA	6 cut(s)	267, 430, 689, 1301, 1429, 1575
HpyF10VI	GCNNNNNNNGC	5 cut(s)	46, 88, 686, 1085, 1426
HpyF3I	CTNAG	3 cut(s)	171, 243, 321
HpySE526I	ACGT	2 cut(s)	582, 591
HspAI	GCGC	2 cut(s)	1320, 1532
Kpn2I	TCCGGA	1 cut(s)	1173
Kzo9I	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
LguI	GCTCTTC	2 cut(s)	935, 1189
LmnI	GCTCC	3 cut(s)	100, 378, 1285
Lsp1109I	GCAGC	6 cut(s)	17, 61, 673, 992, 1060, 1088
LweI	GCATC	3 cut(s)	327, 417, 468
MaeI	CTAG	1 cut(s)	470
MaeII	ACGT	2 cut(s)	582, 591
MaeIII	GTNAC	3 cut(s)	146, 524, 1030
MalI	GATC	6 cut(s)	448, 615, 660, 1022, 1338, 1439
MboI	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
MfeI	CAATTG	1 cut(s)	1651
MflI	RGATCY	2 cut(s)	658, 1437
MhlI	GDGCHC	3 cut(s)	367, 682, 895
MlsI	TGGCCA	2 cut(s)	438, 1044
MluNI	TGGCCA	2 cut(s)	438, 1044
MlyI	GAGTC	4 cut(s)	269, 706, 1171, 1683
MmeI	TCCRAC	1 cut(s)	196
Mox20I	TGGCCA	2 cut(s)	438, 1044
Mph1103I	ATGCAT	2 cut(s)	432, 1431
MroI	TCCGGA	1 cut(s)	1173
MroXI	GAANNNNTTC	2 cut(s)	504, 573
MscI	TGGCCA	2 cut(s)	438, 1044
MseI	TTAA	6 cut(s)	177, 291, 918, 999, 1059, 1544
MslI	CAYNNNNRTG	2 cut(s)	522, 909
Msp20I	TGGCCA	2 cut(s)	438, 1044
MspA1I	CMGCKG	4 cut(s)	8, 52, 107, 1635
MspI	CCGG	3 cut(s)	475, 662, 1174
MspR9I	CCNGG	5 cut(s)	84, 282, 377, 475, 1658
MunI	CAATTG	1 cut(s)	1651
MvaI	CCWGG	4 cut(s)	84, 282, 377, 1658
MwoI	GCNNNNNNNGC	5 cut(s)	46, 88, 686, 1085, 1426
NciI	CCSGG	1 cut(s)	475
NcoI	CCATGG	1 cut(s)	156
NdeI	CATATG	1 cut(s)	164
NdeII	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
NlaIV	GGNNCC	4 cut(s)	81, 102, 366, 660
NmuCI	GTSAC	1 cut(s)	524
NsiI	ATGCAT	2 cut(s)	432, 1431
NspI	RCATGY	4 cut(s)	434, 550, 1429, 1433
NspV	TTCGAA	1 cut(s)	567
PaeI	GCATGC	1 cut(s)	1433
PagI	TCATGA	1 cut(s)	1719
PciSI	GCTCTTC	2 cut(s)	935, 1189
PcsI	WCGNNNNNNNCGW	1 cut(s)	588
PdmI	GAANNNNTTC	2 cut(s)	504, 573
PfeI	GAWTC	4 cut(s)	202, 553, 1170, 1579
PflMI	CCANNNNNTGG	1 cut(s)	1106
PkrI	GCNGC	7 cut(s)	7, 39, 51, 688, 982, 1050, 1078
PleI	GAGTC	4 cut(s)	268, 706, 1171, 1683
PpsI	GAGTC	4 cut(s)	268, 706, 1171, 1683
PsiI	TTATAA	2 cut(s)	825, 957
Psp6I	CCWGG	4 cut(s)	82, 280, 375, 1656
PspFI	CCCAGC	1 cut(s)	122
PspGI	CCWGG	4 cut(s)	82, 280, 375, 1656
PspN4I	GGNNCC	4 cut(s)	81, 102, 366, 660
PspPI	GGNCC	1 cut(s)	278
PstI	CTGCAG	2 cut(s)	691, 1303
PstNI	CAGNNNCTG	1 cut(s)	281
PsuI	RGATCY	2 cut(s)	658, 1437
PvuII	CAGCTG	2 cut(s)	8, 52
RsaI	GTAC	3 cut(s)	722, 1115, 1760
RsaNI	GTAC	3 cut(s)	721, 1114, 1759
RseI	CAYNNNNRTG	2 cut(s)	522, 909
SapI	GCTCTTC	2 cut(s)	935, 1189
SaqAI	TTAA	6 cut(s)	177, 291, 918, 999, 1059, 1544
SatI	GCNGC	7 cut(s)	6, 38, 50, 687, 981, 1049, 1077
Sau3AI	GATC	6 cut(s)	446, 613, 658, 1020, 1336, 1437
Sau96I	GGNCC	1 cut(s)	278
SchI	GAGTC	4 cut(s)	269, 706, 1171, 1683
ScrFI	CCNGG	5 cut(s)	84, 282, 377, 475, 1658
SduI	GDGCHC	3 cut(s)	367, 682, 895
SfaNI	GCATC	3 cut(s)	327, 417, 468
SfcI	CTRYAG	3 cut(s)	687, 1299, 1630
SfuI	TTCGAA	1 cut(s)	567
SmiMI	CAYNNNNRTG	2 cut(s)	522, 909
SmlI	CTYRAG	2 cut(s)	482, 1289
SmoI	CTYRAG	2 cut(s)	482, 1289
SphI	GCATGC	1 cut(s)	1433
SsiI	CCGC	5 cut(s)	37, 107, 842, 1514, 1635
SspI	AATATT	2 cut(s)	295, 415
SspMI	CTAG	1 cut(s)	470
StyD4I	CCNGG	5 cut(s)	82, 280, 375, 473, 1656
StyI	CCWWGG	3 cut(s)	156, 420, 865
TaaI	ACNGT	4 cut(s)	271, 540, 725, 1561
TaiI	ACGT	2 cut(s)	585, 594
TaqI	TCGA	5 cut(s)	65, 567, 994, 1198, 1251
TatI	WGTACW	1 cut(s)	1758
TauI	GCSGC	1 cut(s)	40
TfiI	GAWTC	4 cut(s)	202, 553, 1170, 1579
Tru1I	TTAA	6 cut(s)	177, 291, 918, 999, 1059, 1544
Tru9I	TTAA	6 cut(s)	177, 291, 918, 999, 1059, 1544
TscAI	CASTG	4 cut(s)	81, 696, 976, 1411
TseFI	GTSAC	1 cut(s)	524
TseI	GCWGC	6 cut(s)	5, 49, 686, 980, 1048, 1076
Tsp45I	GTSAC	1 cut(s)	524
TspDTI	ATGAA	4 cut(s)	612, 795, 1233, 1724
TspGWI	ACGGA	1 cut(s)	105
TspRI	CASTG	4 cut(s)	81, 696, 976, 1411
Van91I	CCANNNNNTGG	1 cut(s)	1106
XapI	RAATTY	4 cut(s)	128, 194, 623, 1640
XceI	RCATGY	4 cut(s)	434, 550, 1429, 1433
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1136
XmiI	GTMKAC	2 cut(s)	396, 1687
XmnI	GAANNNNTTC	2 cut(s)	504, 573
XspI	CTAG	1 cut(s)	470
Zsp2I	ATGCAT	2 cut(s)	432, 1431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.