Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001528

Physical Location & Seq

Genomic Coordinates Forward (+)

26795434 .. 26796960

Gene Structure 1527 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG285300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1527 bp

ATGAAAAGGGTTGTGGTGGACTTTTCGTCTCCAAATATAGCAAAAGAGATGCATGTTGGTCACTTGAGATCCACCATCATTGGGGACACAATAGCACGCATGCTTGAGTTTTCGAACGTTCAAGTTCTTCCAAGGAATCATGTAGGTGATTGGGGAACGCAGTTTGGTATTTTGATCGAGTCCCTTGTGGAAAAGTACCCGGAGTTGGAAGATTTTAGCGGAATAGCCATTGGAGATCTGCAGGTTTTGTATAAAGAAGCCAATGATAGATTTAAAAGTGATCCCGAGTTTAAGGAGTCGGCACGAAAGGCAGTGGTTAAGCTTCAGAGTGGGAAGTCTAAGTACCGCAAGTACCGCAAGGCGTGGGAGCAAATCTGTGAAACTAGTCGGAGAGAATTTCAGAAGATTTATCAACGCCTTGGAGTTGAGTTGGAGGAAAAGGGAGAAAGCTTTTACAACCAGTATATTCCTGGGGTTTTAAAGGAGTTGACTGACAAAGAGTTGTTGATTAAGGACAATGGAAACGGAACCAAGAGTGATGCAAGTGATACGAAAGAGAAAAGCAAGAGTGTTGCAAGTGATGAGGAAGGGAAAAGCAAGAGTGCAATGCAAAAGTGCAACTTAGGGCCTCTTGTGATCTCTATTAAAGGTTGTAATGTTCCACTGATTGTTGTGAAGAGTGATGGAGGCTACAACTATGCGACAACCGATTTGGCAGCTCTTTGGTATCGGCTAAATGAAGAGAAAGCTGAGTGGGTTATATATGTTACTGGTAATGAGACATCCCAGAAGGATCACTTGCATAAGATTTTCAAGGCAGCTCAGTGTGCAGGTTGGCTCCCAGCTGATGAAGGCAGGTCATTATATCCAAAAGCTAGCCATGTTGGTTTTGGTCTTGTTTGTGGAGCAGATGCCAAACCCCTCCGGACTCGCTGCGCCAATGTGGTTAGATTAGTTGATTTACTGGATGAAGCGAAGAACCGCAGCAAAGCAGCTCTAATTGAGCGGGGTAAATTAGCTAAAGGTAAAAAGTGGGATGAAGATGAGCTTGAGCGAACCGCAGAGGCTGTTGGTTATGGTGCTGTTAAGTATGCTGACCTGAAGAATAGTAGATGTAGCAAATACAAGTTCGATTTTGATCAGATGCTAAATGATAAGGGAAACACTGCAGTTTACTTGCTCTATGCTCATGCTCGGATCTGTTCTATAATGAGCAAATCTGGCAGAAACATAGAGGAATTGAAAAGAACAGGAGAAATTGTGCTGGATCATGTTGGGGAACGGCAATTGGCGCTTCATTTGCTAAATTTTTCTGAGGCTGTGGAGGAGAGCTGCACCACTCTATTGCCGAATGTTTTGACTGACTACCTCTACAGTTTATCAGAAATCTTCACTAAGTTCTACGAAGACTGCAAGGTTGTTGGGAGTTCACAGGAAACAAGTAGACTGTTGCTTTGTGAAGCAACAGCCTTAGTGATGAGGAACTGTTTTAATCTGCTCGGAATCGAACCTGTTTACAAGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004814 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006420 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Arg_tRNA_synt_N DALR_1 tRNA-synt_1d

Protein Analysis

508

Amino Acids

57.2

Weight (kDa)

7.85

Isoelectric Point (pI)

31.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1d	PF00750	2 - 175	4e-58	tRNA synthetases class I (R), catalytic domain
tRNA-synt_1d	PF00750	202 - 379	8.2e-41	tRNA synthetases class I (R), catalytic domain
DALR_1	PF05746	393 - 508	1.2e-30	DALR anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66530 AT4G26300 AT4G26300 AT4G26300 AT4G26300 AT4G26300
fragaria_vesca	FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400
malus_domestica	MD02G1067300.v1.1 MD15G1198200.v1.1 MD15G1199100.v1.1
prunus_persica	Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1
pyrus_communis	pycom02g05330 pycom15g17660
rosa_chinensis	RchiOBHm_Chr2g0092141 RchiOBHm_Chr3g0454631 RchiOBHm_Chr3g0454641 RchiOBHm_Chr7g0215671
rosa_laevigata	RLG00000016278 RLG00000025428
rosa_multiflora	Rmu_co8501171.1_g000001 Rmu_sc0000898.1_g000026 Rmu_sc0001792.1_g000032 Rmu_sc0001792.1_g000033 Rmu_sc0013552.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149440 Rroxscaffold_3G00243930
rosa_rugosa	Rorug02G0023000 Rorug02G0023100 Rorug02G0023200 Rorug03G0000700 Rorug03G0000800 Rorug07G0156100
rosa_samantha	Rh2AG068800 Rh2BG068100 Rh2CG069300 Rh2DG067400 Rh3DG062300 Rh7AG292900 Rh7BG285300 Rh7CG313000 Rh7DG296400
rosa_wichuraiana	Rw2G006350 Rw7G024930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	232, 821, 846
AccBSI	CCGCTC	1 cut(s)	1006
AccI	GTMKAC	1 cut(s)	1444
AccIII	TCCGGA	1 cut(s)	924
AciI	CCGC	6 cut(s)	219, 346, 355, 982, 1006, 1059
AclI	AACGTT	1 cut(s)	117
AclWI	GGATC	5 cut(s)	63, 275, 801, 1205, 1275
AcsI	RAATTY	2 cut(s)	395, 1306
AcuI	CTGAAG	2 cut(s)	308, 1121
AfaI	GTAC	3 cut(s)	197, 344, 353
AfiI	CCNNNNNNNGG	2 cut(s)	81, 205
AgsI	TTSAA	3 cut(s)	122, 814, 1243
AhdI	GACNNNNNGTC	1 cut(s)	25
AhlI	ACTAGT	1 cut(s)	383
AjnI	CCWGG	1 cut(s)	469
Alw26I	GTCTC	2 cut(s)	33, 773
AlwI	GGATC	5 cut(s)	63, 275, 801, 1205, 1275
AlwNI	CAGNNNCTG	1 cut(s)	1067
Ama87I	CYCGRG	1 cut(s)	284
Aor13HI	TCCGGA	1 cut(s)	924
AoxI	GGCC	1 cut(s)	626
ApeKI	GCWGC	6 cut(s)	716, 818, 933, 984, 992, 1332
ApoI	RAATTY	2 cut(s)	395, 1306
ArsI	GACNNNNNNTTYG	4 cut(s)	694, 726, 1437, 1469
AspLEI	GCGC	2 cut(s)	938, 1294
AspS9I	GGNCC	1 cut(s)	626
AsuC2I	CCSGG	1 cut(s)	200
AsuHPI	GGTGA	1 cut(s)	158
AsuII	TTCGAA	1 cut(s)	113
AsuNHI	GCTAGC	1 cut(s)	875
AvaI	CYCGRG	1 cut(s)	284
BarI	GAAGNNNNNNTAC	2 cut(s)	326, 358
BbsI	GAAGAC	1 cut(s)	1413
BbvI	GCAGC	6 cut(s)	728, 830, 920, 996, 1004, 1319
BccI	CCATC	2 cut(s)	83, 677
BceAI	ACGGC	1 cut(s)	1298
BciT130I	CCWGG	1 cut(s)	471
BclI	TGATCA	1 cut(s)	1138
BcnI	CCSGG	1 cut(s)	200
BcoDI	GTCTC	2 cut(s)	33, 773
BcuI	ACTAGT	1 cut(s)	383
BfaI	CTAG	2 cut(s)	384, 876
BfmI	CTRYAG	3 cut(s)	239, 1167, 1372
BfoI	RGCGCY	1 cut(s)	1295
BfuAI	ACCTGC	3 cut(s)	232, 821, 846
BglII	AGATCT	1 cut(s)	235
BisI	GCNGC	6 cut(s)	717, 819, 934, 985, 993, 1333
BlsI	GCNGC	6 cut(s)	718, 820, 935, 986, 994, 1334
Bme1390I	CCNGG	2 cut(s)	200, 471
BmeRI	GACNNNNNGTC	1 cut(s)	25
BmeT110I	CYCGRG	1 cut(s)	284
BmgT120I	GGNCC	1 cut(s)	626
BmiI	GGNNCC	2 cut(s)	529, 839
BmrFI	CCNGG	2 cut(s)	200, 471
BmsI	GCATC	4 cut(s)	39, 529, 901, 1134
BmtI	GCTAGC	1 cut(s)	879
BpiI	GAAGAC	1 cut(s)	1413
Bpu14I	TTCGAA	1 cut(s)	113
BpuEI	CTTGAG	3 cut(s)	85, 125, 1070
BpuMI	CCSGG	1 cut(s)	200
BsaBI	GATNNNNATC	1 cut(s)	1137
BsaJI	CCNNGG	3 cut(s)	131, 418, 470
BsaWI	WCCGGW	1 cut(s)	924
BsaXI	ACNNNNNCTCC	2 cut(s)	1245, 1275
Bsc4I	CCNNNNNNNGG	2 cut(s)	81, 205
Bse1I	ACTGG	3 cut(s)	460, 775, 969
Bse3DI	GCAATG	1 cut(s)	612
Bse8I	GATNNNNATC	1 cut(s)	1137
BseAI	TCCGGA	1 cut(s)	924
BseBI	CCWGG	1 cut(s)	471
BseDI	CCNNGG	3 cut(s)	131, 418, 470
BseGI	GGATG	3 cut(s)	782, 973, 1042
BseJI	GATNNNNATC	1 cut(s)	1137
BseLI	CCNNNNNNNGG	2 cut(s)	81, 205
BseMI	GCAATG	1 cut(s)	612
BseMII	CTCAG	3 cut(s)	741, 836, 1305
BseNI	ACTGG	3 cut(s)	460, 775, 969
BseRI	GAGGAG	1 cut(s)	1340
BseXI	GCAGC	6 cut(s)	728, 830, 920, 996, 1004, 1319
BseYI	CCCAGC	1 cut(s)	841
BsgI	GTGCAG	2 cut(s)	849, 1318
BshFI	GGCC	1 cut(s)	628
BsiHKCI	CYCGRG	1 cut(s)	284
BsiSI	CCGG	2 cut(s)	200, 925
BslFI	GGGAC	2 cut(s)	98, 166
BslI	CCNNNNNNNGG	2 cut(s)	81, 205
BsmAI	GTCTC	2 cut(s)	33, 773
BsmBI	CGTCTC	1 cut(s)	33
BsmFI	GGGAC	2 cut(s)	98, 166
BsnI	GGCC	1 cut(s)	628
BsoBI	CYCGRG	1 cut(s)	284
Bsp119I	TTCGAA	1 cut(s)	113
Bsp13I	TCCGGA	1 cut(s)	924
Bsp143I	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
BspACI	CCGC	6 cut(s)	219, 346, 355, 982, 1006, 1059
BspANI	GGCC	1 cut(s)	628
BspCNI	CTCAG	3 cut(s)	742, 835, 1306
BspEI	TCCGGA	1 cut(s)	924
BspLI	GGNNCC	2 cut(s)	529, 839
BspMAI	CTGCAG	2 cut(s)	243, 1171
BspMI	ACCTGC	3 cut(s)	232, 821, 846
BspOI	GCTAGC	1 cut(s)	879
BspPI	GGATC	5 cut(s)	63, 275, 801, 1205, 1275
BspT104I	TTCGAA	1 cut(s)	113
BsrBI	CCGCTC	1 cut(s)	1006
BsrDI	GCAATG	1 cut(s)	612
BsrI	ACTGG	3 cut(s)	460, 775, 969
BssECI	CCNNGG	3 cut(s)	131, 418, 470
BssMI	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
BssT1I	CCWWGG	2 cut(s)	131, 418
Bst2UI	CCWGG	1 cut(s)	471
Bst4CI	ACNGT	3 cut(s)	1376, 1449, 1487
Bst6I	CTCTTC	2 cut(s)	671, 735
BstBI	TTCGAA	1 cut(s)	113
BstC8I	GCNNGC	3 cut(s)	97, 101, 877
BstDEI	CTNAG	7 cut(s)	339, 622, 750, 822, 1314, 1395, 1471
BstF5I	GGATG	3 cut(s)	782, 973, 1042
BstH2I	RGCGCY	1 cut(s)	1295
BstHHI	GCGC	2 cut(s)	938, 1294
BstKTI	GATC	9 cut(s)	71, 177, 238, 283, 639, 796, 1141, 1200, 1270
BstMAI	GTCTC	2 cut(s)	33, 773
BstMBI	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
BstMWI	GCNNNNNNNGC	6 cut(s)	308, 354, 827, 1221, 1291, 1300
BstNI	CCWGG	1 cut(s)	471
BstNSI	RCATGY	2 cut(s)	56, 103
BstSCI	CCNGG	2 cut(s)	198, 469
BstSFI	CTRYAG	3 cut(s)	239, 1167, 1372
BstV1I	GCAGC	6 cut(s)	728, 830, 920, 996, 1004, 1319
BstV2I	GAAGAC	1 cut(s)	1413
BstX2I	RGATCY	3 cut(s)	68, 235, 1197
BstYI	RGATCY	3 cut(s)	68, 235, 1197
BsuRI	GGCC	1 cut(s)	628
BtsCI	GGATG	3 cut(s)	782, 973, 1042
BtsI	GCAGTG	2 cut(s)	318, 1164
BtsIMutI	CAGTG	4 cut(s)	318, 662, 830, 1164
BveI	ACCTGC	3 cut(s)	232, 821, 846
Cac8I	GCNNGC	3 cut(s)	97, 101, 877
CaiI	CAGNNNCTG	1 cut(s)	1067
CfoI	GCGC	2 cut(s)	938, 1294
Cfr13I	GGNCC	1 cut(s)	626
Csp6I	GTAC	3 cut(s)	196, 343, 352
CspCI	CAANNNNNGTGG	2 cut(s)	61, 96
CviAII	CATG	6 cut(s)	53, 100, 140, 881, 1190, 1271
CviQI	GTAC	3 cut(s)	196, 343, 352
DdeI	CTNAG	7 cut(s)	339, 622, 750, 822, 1314, 1395, 1471
DpnI	GATC	9 cut(s)	70, 176, 237, 282, 638, 795, 1140, 1199, 1269
DpnII	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
DraI	TTTAAA	2 cut(s)	274, 480
DriI	GACNNNNNGTC	1 cut(s)	25
Eam1104I	CTCTTC	2 cut(s)	671, 735
Eam1105I	GACNNNNNGTC	1 cut(s)	25
EarI	CTCTTC	2 cut(s)	671, 735
Eco130I	CCWWGG	2 cut(s)	131, 418
Eco57I	CTGAAG	2 cut(s)	308, 1121
Eco88I	CYCGRG	1 cut(s)	284
EcoO109I	RGGNCCY	1 cut(s)	626
EcoRII	CCWGG	1 cut(s)	469
EcoT14I	CCWWGG	2 cut(s)	131, 418
EcoT22I	ATGCAT	1 cut(s)	54
ErhI	CCWWGG	2 cut(s)	131, 418
Esp3I	CGTCTC	1 cut(s)	33
FaeI	CATG	6 cut(s)	56, 103, 143, 884, 1193, 1274
FalI	AAGNNNNNCTT	6 cut(s)	605, 637, 782, 814, 1032, 1064
FaqI	GGGAC	2 cut(s)	98, 166
FatI	CATG	6 cut(s)	52, 99, 139, 880, 1189, 1270
FauI	CCCGC	1 cut(s)	999
FbaI	TGATCA	1 cut(s)	1138
FblI	GTMKAC	1 cut(s)	1444
Fnu4HI	GCNGC	6 cut(s)	717, 819, 934, 985, 993, 1333
FokI	GGATG	3 cut(s)	769, 980, 1049
Fsp4HI	GCNGC	6 cut(s)	717, 819, 934, 985, 993, 1333
FspBI	CTAG	2 cut(s)	384, 876
GlaI	GCGC	2 cut(s)	937, 1293
GluI	GCNGC	6 cut(s)	717, 819, 934, 985, 993, 1333
GsaI	CCCAGC	1 cut(s)	845
HaeII	RGCGCY	1 cut(s)	1295
HaeIII	GGCC	1 cut(s)	628
HapII	CCGG	2 cut(s)	200, 925
HhaI	GCGC	2 cut(s)	938, 1294
Hin1II	CATG	6 cut(s)	56, 103, 143, 884, 1193, 1274
Hin6I	GCGC	2 cut(s)	936, 1292
HinP1I	GCGC	2 cut(s)	936, 1292
HincII	GTYRAC	1 cut(s)	489
HindII	GTYRAC	1 cut(s)	489
HindIII	AAGCTT	2 cut(s)	320, 448
HinfI	GANTC	5 cut(s)	136, 179, 296, 928, 1503
HpaII	CCGG	2 cut(s)	200, 925
HphI	GGTGA	1 cut(s)	158
Hpy166II	GTNNAC	6 cut(s)	19, 489, 1174, 1430, 1445, 1516
Hpy188I	TCNGA	8 cut(s)	327, 390, 402, 1143, 1197, 1315, 1384, 1502
Hpy188III	TCNNGA	2 cut(s)	284, 925
Hpy8I	GTNNAC	6 cut(s)	19, 489, 1174, 1430, 1445, 1516
HpyAV	CCTTC	3 cut(s)	581, 784, 845
HpyCH4III	ACNGT	3 cut(s)	1376, 1449, 1487
HpyCH4IV	ACGT	1 cut(s)	117
HpyF10VI	GCNNNNNNNGC	6 cut(s)	308, 354, 827, 1221, 1291, 1300
HpyF3I	CTNAG	7 cut(s)	339, 622, 750, 822, 1314, 1395, 1471
HpySE526I	ACGT	1 cut(s)	117
Hsp92II	CATG	6 cut(s)	56, 103, 143, 884, 1193, 1274
HspAI	GCGC	2 cut(s)	936, 1292
Kpn2I	TCCGGA	1 cut(s)	924
Ksp22I	TGATCA	1 cut(s)	1138
Kzo9I	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
LmnI	GCTCC	3 cut(s)	367, 843, 905
Lsp1109I	GCAGC	6 cut(s)	728, 830, 920, 996, 1004, 1319
LweI	GCATC	4 cut(s)	39, 529, 901, 1134
MaeI	CTAG	2 cut(s)	384, 876
MaeII	ACGT	1 cut(s)	117
MaeIII	GTNAC	2 cut(s)	59, 766
MalI	GATC	9 cut(s)	70, 176, 237, 282, 638, 795, 1140, 1199, 1269
MbiI	CCGCTC	1 cut(s)	1006
MboI	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
MfeI	CAATTG	1 cut(s)	1286
MflI	RGATCY	3 cut(s)	68, 235, 1197
MluCI	AATT	7 cut(s)	395, 999, 1013, 1238, 1257, 1286, 1306
MlyI	GAGTC	3 cut(s)	188, 305, 922
MmeI	TCCRAC	3 cut(s)	186, 368, 411
Mph1103I	ATGCAT	1 cut(s)	54
MroI	TCCGGA	1 cut(s)	924
MseI	TTAA	8 cut(s)	273, 291, 318, 479, 510, 645, 1086, 1491
MslI	CAYNNNNRTG	1 cut(s)	144
MspA1I	CMGCKG	1 cut(s)	845
MspI	CCGG	2 cut(s)	200, 925
MspR9I	CCNGG	2 cut(s)	200, 471
MunI	CAATTG	1 cut(s)	1286
MvaI	CCWGG	1 cut(s)	471
MwoI	GCNNNNNNNGC	6 cut(s)	308, 354, 827, 1221, 1291, 1300
NciI	CCSGG	1 cut(s)	200
NdeII	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
NheI	GCTAGC	1 cut(s)	875
NlaIII	CATG	6 cut(s)	56, 103, 143, 884, 1193, 1274
NlaIV	GGNNCC	2 cut(s)	529, 839
NmuCI	GTSAC	1 cut(s)	59
NsiI	ATGCAT	1 cut(s)	54
NspI	RCATGY	2 cut(s)	56, 103
NspV	TTCGAA	1 cut(s)	113
PaeI	GCATGC	1 cut(s)	103
PfeI	GAWTC	2 cut(s)	136, 1503
PkrI	GCNGC	6 cut(s)	718, 820, 935, 986, 994, 1334
PleI	GAGTC	3 cut(s)	187, 304, 922
PpsI	GAGTC	3 cut(s)	187, 304, 922
Psp1406I	AACGTT	1 cut(s)	117
Psp6I	CCWGG	1 cut(s)	469
PspFI	CCCAGC	1 cut(s)	841
PspGI	CCWGG	1 cut(s)	469
PspN4I	GGNNCC	2 cut(s)	529, 839
PspPI	GGNCC	1 cut(s)	626
PstI	CTGCAG	2 cut(s)	243, 1171
PstNI	CAGNNNCTG	1 cut(s)	1067
PsuI	RGATCY	3 cut(s)	68, 235, 1197
PvuII	CAGCTG	1 cut(s)	845
RsaI	GTAC	3 cut(s)	197, 344, 353
RsaNI	GTAC	3 cut(s)	196, 343, 352
RseI	CAYNNNNRTG	1 cut(s)	144
SaqAI	TTAA	8 cut(s)	273, 291, 318, 479, 510, 645, 1086, 1491
SatI	GCNGC	6 cut(s)	717, 819, 934, 985, 993, 1333
Sau3AI	GATC	9 cut(s)	68, 174, 235, 280, 636, 793, 1138, 1197, 1267
Sau96I	GGNCC	1 cut(s)	626
SchI	GAGTC	3 cut(s)	188, 305, 922
ScrFI	CCNGG	2 cut(s)	200, 471
SfaNI	GCATC	4 cut(s)	39, 529, 901, 1134
SfcI	CTRYAG	3 cut(s)	239, 1167, 1372
SfuI	TTCGAA	1 cut(s)	113
SmiMI	CAYNNNNRTG	1 cut(s)	144
SmlI	CTYRAG	3 cut(s)	64, 104, 1049
SmoI	CTYRAG	3 cut(s)	64, 104, 1049
SpeI	ACTAGT	1 cut(s)	383
SphI	GCATGC	1 cut(s)	103
Sse9I	AATT	7 cut(s)	395, 999, 1013, 1238, 1257, 1286, 1306
SsiI	CCGC	6 cut(s)	219, 346, 355, 982, 1006, 1059
SspMI	CTAG	2 cut(s)	384, 876
StyD4I	CCNGG	2 cut(s)	198, 469
StyI	CCWWGG	2 cut(s)	131, 418
TaaI	ACNGT	3 cut(s)	1376, 1449, 1487
TaiI	ACGT	1 cut(s)	120
TaqI	TCGA	4 cut(s)	113, 177, 1131, 1506
TasI	AATT	7 cut(s)	395, 999, 1013, 1238, 1257, 1286, 1306
TfiI	GAWTC	2 cut(s)	136, 1503
Tru1I	TTAA	8 cut(s)	273, 291, 318, 479, 510, 645, 1086, 1491
Tru9I	TTAA	8 cut(s)	273, 291, 318, 479, 510, 645, 1086, 1491
TscAI	CASTG	4 cut(s)	318, 669, 830, 1171
TseFI	GTSAC	1 cut(s)	59
TseI	GCWGC	6 cut(s)	716, 818, 933, 984, 992, 1332
Tsp45I	GTSAC	1 cut(s)	59
TspDTI	ATGAA	6 cut(s)	17, 753, 864, 984, 1053, 1286
TspGWI	ACGGA	1 cut(s)	540
TspRI	CASTG	4 cut(s)	318, 669, 830, 1171
XapI	RAATTY	2 cut(s)	395, 1306
XceI	RCATGY	2 cut(s)	56, 103
XcmI	CCANNNNNNNNNTGG	2 cut(s)	467, 887
XmiI	GTMKAC	1 cut(s)	1444
XspI	CTAG	2 cut(s)	384, 876
Zsp2I	ATGCAT	1 cut(s)	54

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.