Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001528

Physical Location & Seq

Genomic Coordinates Forward (+)

15737416 .. 15750907

Gene Structure 13492 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1198200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGTTTGGTACCCACTTAAACCTGATTGCGCCGATTTCTCCTTCCTTCTGTCGACTCTCTTGTCACCACCCCTCTCCTTCCCTCCCCGCCACCGACTTATTGAAGGTAGCATCTAGAGAGCTTATTTTTGCAGCAAAGTCCCACTCAGTATCGACAATGGCAACTGAAGAAGAGAATGTGGGAAATGCAAAGCAACAGTTGGCAAAACTGTTTGAAGTGTCGCTCAGGAGAATAGTCCCTGACGAGCAAGATGTCGCGCCAGTGATTGCTGCTTCAACTGGGAAGTTTGGCGATTATCAATGTAACAATGCCATGGGTCTATGGTCTAAAATAAAAGGAAAGGGGAGTGAGTTCAGGGGTCCTCCATCTGTTGGGCAGGCAATCATGAAAAATCTTCCTGATTCGGAGGTCATAGAATCTTGTTCTGTAGCAGGACCTGGATTTGTGAATGTTGTCTTGTCAAAGAAATGGTTGGCTAAGAGAATACAAAAGATGCTTATTGATGGTATCGAGAAATGGGCGCCACAGCTACCGATCAAAAGGGCTGTGGTTGACTTTTCCTCGCCTAATATAGCTAAAGAAATGCATGTGGGTCACCTAAGGTCAACTATTATTGGGGATACGCTATCCCGTATTCTCGAGTTTTCAAATGTAGAAGTTCTTCGACGAAATCATGTTGGTGACTGGGGGACACAGTTCGGTATGTTGATTGAGTTCCTTTTTGAAAAGTTCCCAAGCATAGAAGATGTTAATGAATCGGCTATTGGTGATCTACAGGCATTCTATAAAGCATCAAAACAGAGATTTGATGATGATCCTGCTTTTAAGGAGAGAGCACAACGGGCAGTGGTTTCCCTTCAGGGTGGAGAACCCAAGTACAGAAATGCATGGCTGAAAATCTGCGAAATCAGCCGTAAAGAATTCCACAAGGTCTATGAACGCCTTGGAGTTCATTTAGAGGAAAAGGGTGCTCGTGTAATCTTTCTGGAAGGGTTTAACATCCCTCTTATTGTTGTCAAGAGCGATGGTGGTTTCAACTATGCTTCAACTGATTTAGCAGCTCTTTGGTATCGCCTTAATGAGGAGAAAGCGGATTGGATCATATATGTTACTGATGTTGGCCAGCAGCAGCATTTTAATATGTTTTTTGAGGCAGCTAAACGTGCAGGTTGGCTCCCAACTGATGGCGCCTTAAAACCAAAGGTTGCCCATGTTGGTTTTGGTCTTGTTCTTGGAGAAGACGGAAAACGCTTTCGTACTCGCTCTAGTGAGGTGGTCCGATTGGTTGATTTGCTTGATGAAGCCAAGGATCGTAGCAAAAAGTTCTTGTTGAATGTGGAGCTTAATCAAATTGCTGAGGCTGTTGGTTATGGTGCTGCATTCTATAAAGCATCAAAACAGAGATTTGATGATGATCCTGCTTTTAAGGAGAGAGCACAACGGGCAGTGGTTTCCCTTCAGGGTGGAGAACCCAAGTACAGAAATGCATGGCTGAAAATCTGCGAAATCGGCCGTAAAGAATTTCACAAGGTCTATGAACGCCTTGGAGTTCATTTAGAGGAAAATGGAGAGAGTTTTTATAACCCATATATTCCTGAGGTTTTAAAAGAATTGAGTGATAAAGGCTTAATTGAGGAAAGCCAGGGTGCTCGTGTAATCTTTCTGGAAGGGTTTAACATCCCTCTTATTGTTGTCAAGAGCGATGGTGGTTTCAACTATGCTTCAACTGATTTAGCAGCTCTTTGGTATCGCCTTAATGAGGAGAAAGCGGATTGGATCATATATGTTACTGATGTTGGCCAGCAGCAGCATTTTAATATGTTTTTTGAGGCAGCTAAATGTGCAGGTTGGCTCCCAACTGATGGCGCCTTAAAACCAAAGGTTGCCTATGTTGGTTTTGGTCTTGTTCTTGGAGAAGACGGAAAACGCTTTCGTACTCGCTCTAGTGAGGTTGTCCGATTGGTTGATTTGCTTGATGAAGCCAAGGATCGTAGCAAAAAGGAGCTTAATCAAATTGCTGAGTCTGTTGGTTACGGTGCTGTTAGGGTGTGTTTGGTACGTGGGATGGGACGGAACAGAGTGGGACGGATGCGTTCCGTCCCACGTTTGGTGCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004814 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006420 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Arg_tRNA_synt_N DALR_1 tRNA-synt_1d

Protein Analysis

706

Amino Acids

79.19

Weight (kDa)

8.78

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arg_tRNA_synt_N	PF03485	66 - 153	4.9e-15	Arginyl tRNA synthetase N terminal domain
tRNA-synt_1d	PF00750	179 - 323	5e-53	tRNA synthetases class I (R), catalytic domain
tRNA-synt_1d	PF00750	319 - 457	4.9e-36	tRNA synthetases class I (R), catalytic domain
tRNA-synt_1d	PF00750	459 - 670	1.3e-62	tRNA synthetases class I (R), catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66530 AT4G26300 AT4G26300 AT4G26300 AT4G26300 AT4G26300
fragaria_vesca	FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400
malus_domestica	MD02G1067300.v1.1 MD15G1198200.v1.1 MD15G1199100.v1.1
prunus_persica	Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1
pyrus_communis	pycom02g05330 pycom15g17660
rosa_chinensis	RchiOBHm_Chr2g0092141 RchiOBHm_Chr3g0454631 RchiOBHm_Chr3g0454641 RchiOBHm_Chr7g0215671
rosa_laevigata	RLG00000016278 RLG00000025428
rosa_multiflora	Rmu_co8501171.1_g000001 Rmu_sc0000898.1_g000026 Rmu_sc0001792.1_g000032 Rmu_sc0001792.1_g000033 Rmu_sc0013552.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149440 Rroxscaffold_3G00243930
rosa_rugosa	Rorug02G0023000 Rorug02G0023100 Rorug02G0023200 Rorug03G0000700 Rorug03G0000800 Rorug07G0156100
rosa_samantha	Rh2AG068800 Rh2BG068100 Rh2CG069300 Rh2DG067400 Rh3DG062300 Rh7AG292900 Rh7BG285300 Rh7CG313000 Rh7DG296400
rosa_wichuraiana	Rw2G006350 Rw7G024930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1581
AasI	GACNNNNNNGTC	1 cut(s)	60
Acc36I	ACCTGC	2 cut(s)	1157, 1835
Acc65I	GGTACC	1 cut(s)	8
AccB1I	GGYRCC	4 cut(s)	8, 520, 1187, 1865
AccB7I	CCANNNNNTGG	3 cut(s)	371, 1184, 1862
AccI	GTMKAC	1 cut(s)	52
AccII	CGCG	1 cut(s)	257
AciI	CCGC	3 cut(s)	87, 1091, 1769
AclWI	GGATC	6 cut(s)	809, 1106, 1317, 1409, 1784, 1995
AcoI	YGGCCR	3 cut(s)	1120, 1510, 1798
AcsI	RAATTY	2 cut(s)	920, 1520
AcuI	CTGAAG	3 cut(s)	186, 842, 1442
AcyI	GRCGYC	3 cut(s)	521, 1188, 1866
AfaI	GTAC	6 cut(s)	10, 878, 1258, 1478, 1936, 2058
AfiI	CCNNNNNNNGG	6 cut(s)	371, 1081, 1184, 1759, 1862, 2107
AjnI	CCWGG	2 cut(s)	436, 1641
AjuI	GAANNNNNNNTTGG	2 cut(s)	747, 779
AluBI	AGCT	9 cut(s)	121, 529, 575, 1061, 1157, 1342, 1739, 1835, 2005
AluI	AGCT	9 cut(s)	121, 529, 575, 1061, 1157, 1342, 1739, 1835, 2005
Alw21I	GWGCWC	4 cut(s)	838, 973, 1438, 1651
AlwI	GGATC	6 cut(s)	809, 1106, 1317, 1409, 1784, 1995
AlwNI	CAGNNNCTG	1 cut(s)	437
Ama87I	CYCGRG	1 cut(s)	638
AoxI	GGCC	3 cut(s)	1120, 1510, 1798
ApoI	RAATTY	2 cut(s)	920, 1520
Asp700I	GAANNNNTTC	1 cut(s)	660
Asp718I	GGTACC	1 cut(s)	8
AspLEI	GCGC	6 cut(s)	31, 259, 523, 1190, 1868, 2115
AspS9I	GGNCC	3 cut(s)	359, 434, 1276
AsuHPI	GGTGA	4 cut(s)	56, 587, 692, 779
AvaI	CYCGRG	1 cut(s)	638
AvaII	GGWCC	3 cut(s)	359, 434, 1276
AxyI	CCTNAGG	2 cut(s)	599, 1596
BalI	TGGCCA	2 cut(s)	1122, 1800
BanI	GGYRCC	4 cut(s)	8, 520, 1187, 1865
BarI	GAAGNNNNNNTAC	2 cut(s)	645, 677
BauI	CACGAG	2 cut(s)	972, 1650
BbsI	GAAGAC	2 cut(s)	1245, 1923
Bbv12I	GWGCWC	4 cut(s)	838, 973, 1438, 1651
BbvCI	CCTCAGC	1 cut(s)	1356
BccI	CCATC	7 cut(s)	373, 497, 1019, 1178, 1697, 1856, 2059
BceAI	ACGGC	2 cut(s)	897, 1497
BciT130I	CCWGG	2 cut(s)	438, 1643
BciVI	GTATCC	1 cut(s)	613
BfaI	CTAG	3 cut(s)	114, 1266, 1944
BfmI	CTRYAG	2 cut(s)	426, 773
BfoI	RGCGCY	3 cut(s)	524, 1191, 1869
BfuAI	ACCTGC	2 cut(s)	1157, 1835
BfuI	GTATCC	1 cut(s)	613
Bme1390I	CCNGG	2 cut(s)	438, 1643
Bme18I	GGWCC	3 cut(s)	359, 434, 1276
BmeT110I	CYCGRG	1 cut(s)	638
BmgT120I	GGNCC	3 cut(s)	359, 434, 1276
BmiI	GGNNCC	7 cut(s)	10, 360, 522, 1175, 1189, 1853, 1867
BmrFI	CCNGG	2 cut(s)	438, 1643
BmrI	ACTGGG	2 cut(s)	288, 694
BmsI	GCATC	5 cut(s)	119, 483, 800, 1400, 2079
BmuI	ACTGGG	2 cut(s)	288, 694
BpiI	GAAGAC	2 cut(s)	1245, 1923
Bpu10I	CCTNAGC	2 cut(s)	224, 1356
BsaAI	YACGTR	1 cut(s)	2060
BsaBI	GATNNNNATC	2 cut(s)	813, 1413
BsaHI	GRCGYC	3 cut(s)	521, 1188, 1866
BsaJI	CCNNGG	6 cut(s)	312, 943, 1305, 1543, 1642, 1983
Bsc4I	CCNNNNNNNGG	6 cut(s)	371, 1081, 1184, 1759, 1862, 2107
Bse1I	ACTGG	3 cut(s)	260, 283, 689
Bse21I	CCTNAGG	2 cut(s)	599, 1596
Bse8I	GATNNNNATC	2 cut(s)	813, 1413
BseBI	CCWGG	2 cut(s)	438, 1643
BseDI	CCNNGG	6 cut(s)	312, 943, 1305, 1543, 1642, 1983
BseGI	GGATG	4 cut(s)	999, 1677, 2070, 2094
BseJI	GATNNNNATC	2 cut(s)	813, 1413
BseLI	CCNNNNNNNGG	6 cut(s)	371, 1081, 1184, 1759, 1862, 2107
BseMII	CTCAG	5 cut(s)	159, 238, 1347, 1587, 2010
BseNI	ACTGG	3 cut(s)	260, 283, 689
BseRI	GAGGAG	2 cut(s)	1097, 1775
BseX3I	CGGCCG	1 cut(s)	1510
BsgI	GTGCAG	2 cut(s)	1185, 1863
Bsh1236I	CGCG	1 cut(s)	257
Bsh1285I	CGRYCG	1 cut(s)	1513
BshFI	GGCC	3 cut(s)	1122, 1512, 1800
BshNI	GGYRCC	4 cut(s)	8, 520, 1187, 1865
BsiEI	CGRYCG	1 cut(s)	1513
BsiHKAI	GWGCWC	4 cut(s)	838, 973, 1438, 1651
BsiHKCI	CYCGRG	1 cut(s)	638
BslFI	GGGAC	6 cut(s)	124, 221, 703, 2082, 2084, 2097
BslI	CCNNNNNNNGG	6 cut(s)	371, 1081, 1184, 1759, 1862, 2107
BsmFI	GGGAC	6 cut(s)	124, 221, 703, 2082, 2084, 2097
BsmI	GAATGC	2 cut(s)	779, 1379
BsnI	GGCC	3 cut(s)	1122, 1512, 1800
BsoBI	CYCGRG	1 cut(s)	638
Bsp1286I	GDGCHC	4 cut(s)	838, 973, 1438, 1651
Bsp143I	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
Bsp19I	CCATGG	1 cut(s)	312
BspACI	CCGC	3 cut(s)	87, 1091, 1769
BspANI	GGCC	3 cut(s)	1122, 1512, 1800
BspCNI	CTCAG	5 cut(s)	158, 237, 1348, 1588, 2011
BspFNI	CGCG	1 cut(s)	257
BspHI	TCATGA	1 cut(s)	384
BspLI	GGNNCC	7 cut(s)	10, 360, 522, 1175, 1189, 1853, 1867
BspMI	ACCTGC	2 cut(s)	1157, 1835
BspPI	GGATC	6 cut(s)	809, 1106, 1317, 1409, 1784, 1995
BspT107I	GGYRCC	4 cut(s)	8, 520, 1187, 1865
BsrI	ACTGG	3 cut(s)	260, 283, 689
BssECI	CCNNGG	6 cut(s)	312, 943, 1305, 1543, 1642, 1983
BssMI	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
BssNI	GRCGYC	3 cut(s)	521, 1188, 1866
BssSI	CACGAG	2 cut(s)	972, 1650
BssT1I	CCWWGG	5 cut(s)	312, 943, 1305, 1543, 1983
Bst2BI	CACGAG	2 cut(s)	972, 1650
Bst2UI	CCWGG	2 cut(s)	438, 1643
Bst4CI	ACNGT	4 cut(s)	198, 210, 696, 2036
Bst6I	CTCTTC	1 cut(s)	165
BstACI	GRCGYC	3 cut(s)	521, 1188, 1866
BstBAI	YACGTR	1 cut(s)	2060
BstC8I	GCNNGC	3 cut(s)	378, 1124, 1802
BstDEI	CTNAG	7 cut(s)	145, 224, 477, 599, 1356, 1596, 2019
BstDSI	CCRYGG	1 cut(s)	312
BstEII	GGTNACC	1 cut(s)	593
BstENI	CCTNNNNNAGG	2 cut(s)	1079, 1757
BstF5I	GGATG	4 cut(s)	999, 1677, 2070, 2094
BstFNI	CGCG	1 cut(s)	257
BstH2I	RGCGCY	3 cut(s)	524, 1191, 1869
BstHHI	GCGC	6 cut(s)	31, 259, 523, 1190, 1868, 2115
BstKTI	GATC	8 cut(s)	537, 772, 817, 1101, 1312, 1417, 1779, 1990
BstMBI	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
BstMCI	CGRYCG	1 cut(s)	1513
BstMWI	GCNNNNNNNGC	6 cut(s)	842, 909, 1163, 1442, 1509, 1841
BstNI	CCWGG	2 cut(s)	438, 1643
BstNSI	RCATGY	1 cut(s)	590
BstPI	GGTNACC	1 cut(s)	593
BstSCI	CCNGG	2 cut(s)	436, 1641
BstSFI	CTRYAG	2 cut(s)	426, 773
BstUI	CGCG	1 cut(s)	257
BstV2I	GAAGAC	2 cut(s)	1245, 1923
BstZI	CGGCCG	1 cut(s)	1510
Bsu36I	CCTNAGG	2 cut(s)	599, 1596
BsuI	GTATCC	1 cut(s)	613
BsuRI	GGCC	3 cut(s)	1122, 1512, 1800
BtgI	CCRYGG	1 cut(s)	312
BtgZI	GCGATG	2 cut(s)	1038, 1716
BtsCI	GGATG	4 cut(s)	999, 1677, 2070, 2094
BtsI	GCAGTG	2 cut(s)	852, 1452
BtsIMutI	CAGTG	3 cut(s)	267, 852, 1452
BveI	ACCTGC	2 cut(s)	1157, 1835
Cac8I	GCNNGC	3 cut(s)	378, 1124, 1802
CaiI	CAGNNNCTG	1 cut(s)	437
CciI	TCATGA	1 cut(s)	384
CfoI	GCGC	6 cut(s)	31, 259, 523, 1190, 1868, 2115
Cfr13I	GGNCC	3 cut(s)	359, 434, 1276
Csp6I	GTAC	6 cut(s)	9, 877, 1257, 1477, 1935, 2057
CviAII	CATG	7 cut(s)	313, 385, 587, 674, 888, 1211, 1488
CviQI	GTAC	6 cut(s)	9, 877, 1257, 1477, 1935, 2057
DdeI	CTNAG	7 cut(s)	145, 224, 477, 599, 1356, 1596, 2019
DinI	GGCGCC	3 cut(s)	522, 1189, 1867
DpnI	GATC	8 cut(s)	536, 771, 816, 1100, 1311, 1416, 1778, 1989
DpnII	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
DraI	TTTAAA	1 cut(s)	1605
DrdI	GACNNNNNNGTC	1 cut(s)	60
DseDI	GACNNNNNNGTC	1 cut(s)	60
EaeI	YGGCCR	3 cut(s)	1120, 1510, 1798
EagI	CGGCCG	1 cut(s)	1510
Eam1104I	CTCTTC	1 cut(s)	165
EarI	CTCTTC	1 cut(s)	165
EclXI	CGGCCG	1 cut(s)	1510
Eco130I	CCWWGG	5 cut(s)	312, 943, 1305, 1543, 1983
Eco47I	GGWCC	3 cut(s)	359, 434, 1276
Eco52I	CGGCCG	1 cut(s)	1510
Eco57I	CTGAAG	3 cut(s)	186, 842, 1442
Eco81I	CCTNAGG	2 cut(s)	599, 1596
Eco88I	CYCGRG	1 cut(s)	638
Eco91I	GGTNACC	1 cut(s)	593
EcoNI	CCTNNNNNAGG	2 cut(s)	1079, 1757
EcoO109I	RGGNCCY	2 cut(s)	359, 434
EcoO65I	GGTNACC	1 cut(s)	593
EcoRI	GAATTC	1 cut(s)	920
EcoRII	CCWGG	2 cut(s)	436, 1641
EcoT14I	CCWWGG	5 cut(s)	312, 943, 1305, 1543, 1983
EcoT22I	ATGCAT	3 cut(s)	588, 889, 1489
EgeI	GGCGCC	3 cut(s)	522, 1189, 1867
EheI	GGCGCC	3 cut(s)	522, 1189, 1867
ErhI	CCWWGG	5 cut(s)	312, 943, 1305, 1543, 1983
FaeI	CATG	7 cut(s)	316, 388, 590, 677, 891, 1214, 1491
FaqI	GGGAC	6 cut(s)	124, 221, 703, 2082, 2084, 2097
FatI	CATG	7 cut(s)	312, 384, 586, 673, 887, 1210, 1487
FauI	CCCGC	1 cut(s)	94
FblI	GTMKAC	1 cut(s)	52
FokI	GGATG	4 cut(s)	986, 1664, 2077, 2101
FspBI	CTAG	3 cut(s)	114, 1266, 1944
GlaI	GCGC	6 cut(s)	30, 258, 522, 1189, 1867, 2114
HaeII	RGCGCY	3 cut(s)	524, 1191, 1869
HaeIII	GGCC	3 cut(s)	1122, 1512, 1800
HhaI	GCGC	6 cut(s)	31, 259, 523, 1190, 1868, 2115
Hin1I	GRCGYC	3 cut(s)	521, 1188, 1866
Hin1II	CATG	7 cut(s)	316, 388, 590, 677, 891, 1214, 1491
Hin6I	GCGC	6 cut(s)	29, 257, 521, 1188, 1866, 2113
HinP1I	GCGC	6 cut(s)	29, 257, 521, 1188, 1866, 2113
HincII	GTYRAC	3 cut(s)	53, 553, 606
HindII	GTYRAC	3 cut(s)	53, 553, 606
HinfI	GANTC	5 cut(s)	54, 401, 416, 755, 2021
HphI	GGTGA	4 cut(s)	56, 587, 692, 779
Hpy166II	GTNNAC	3 cut(s)	53, 553, 606
Hpy188I	TCNGA	3 cut(s)	406, 1280, 1958
Hpy8I	GTNNAC	3 cut(s)	53, 553, 606
Hpy99I	CGWCG	1 cut(s)	669
HpyAV	CCTTC	8 cut(s)	51, 55, 87, 97, 866, 983, 1466, 1661
HpyCH4III	ACNGT	4 cut(s)	198, 210, 696, 2036
HpyCH4IV	ACGT	3 cut(s)	1162, 2059, 2104
HpyCH4V	TGCA	8 cut(s)	131, 188, 586, 887, 1166, 1379, 1487, 1844
HpyF10VI	GCNNNNNNNGC	6 cut(s)	842, 909, 1163, 1442, 1509, 1841
HpyF3I	CTNAG	7 cut(s)	145, 224, 477, 599, 1356, 1596, 2019
HpySE526I	ACGT	3 cut(s)	1162, 2059, 2104
Hsp92I	GRCGYC	3 cut(s)	521, 1188, 1866
Hsp92II	CATG	7 cut(s)	316, 388, 590, 677, 891, 1214, 1491
HspAI	GCGC	6 cut(s)	29, 257, 521, 1188, 1866, 2113
KasI	GGCGCC	3 cut(s)	520, 1187, 1865
KpnI	GGTACC	1 cut(s)	12
Kzo9I	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
LmnI	GCTCC	4 cut(s)	1179, 1339, 1857, 2002
LweI	GCATC	5 cut(s)	119, 483, 800, 1400, 2079
MaeI	CTAG	3 cut(s)	114, 1266, 1944
MaeII	ACGT	3 cut(s)	1162, 2059, 2104
MaeIII	GTNAC	7 cut(s)	62, 302, 593, 680, 1108, 1786, 2030
MalI	GATC	8 cut(s)	536, 771, 816, 1100, 1311, 1416, 1778, 1989
MboI	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
MboII	GAAGA	7 cut(s)	179, 182, 386, 653, 755, 1250, 1928
MhlI	GDGCHC	4 cut(s)	838, 973, 1438, 1651
MlsI	TGGCCA	2 cut(s)	1122, 1800
MluCI	AATT	6 cut(s)	920, 1350, 1520, 1610, 1629, 2013
MluNI	TGGCCA	2 cut(s)	1122, 1800
Mly113I	GGCGCC	3 cut(s)	521, 1188, 1866
MlyI	GAGTC	2 cut(s)	48, 2030
Mox20I	TGGCCA	2 cut(s)	1122, 1800
Mph1103I	ATGCAT	3 cut(s)	588, 889, 1489
MroXI	GAANNNNTTC	1 cut(s)	660
MscI	TGGCCA	2 cut(s)	1122, 1800
MslI	CAYNNNNRTG	1 cut(s)	678
Msp20I	TGGCCA	2 cut(s)	1122, 1800
MspR9I	CCNGG	2 cut(s)	438, 1643
Mva1269I	GAATGC	2 cut(s)	779, 1379
MvaI	CCWGG	2 cut(s)	438, 1643
MvnI	CGCG	1 cut(s)	257
MwoI	GCNNNNNNNGC	6 cut(s)	842, 909, 1163, 1442, 1509, 1841
NarI	GGCGCC	3 cut(s)	521, 1188, 1866
NcoI	CCATGG	1 cut(s)	312
NdeII	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
NlaIII	CATG	7 cut(s)	316, 388, 590, 677, 891, 1214, 1491
NlaIV	GGNNCC	7 cut(s)	10, 360, 522, 1175, 1189, 1853, 1867
NmuCI	GTSAC	3 cut(s)	62, 593, 680
NsiI	ATGCAT	3 cut(s)	588, 889, 1489
NspI	RCATGY	1 cut(s)	590
PaeR7I	CTCGAG	1 cut(s)	638
PagI	TCATGA	1 cut(s)	384
PctI	GAATGC	2 cut(s)	779, 1379
PdmI	GAANNNNTTC	1 cut(s)	660
PfeI	GAWTC	3 cut(s)	401, 416, 755
PflMI	CCANNNNNTGG	3 cut(s)	371, 1184, 1862
PleI	GAGTC	2 cut(s)	48, 2029
PluTI	GGCGCC	3 cut(s)	524, 1191, 1869
PpsI	GAGTC	2 cut(s)	48, 2029
Ppu21I	YACGTR	1 cut(s)	2060
PpuMI	RGGWCCY	2 cut(s)	359, 434
PsiI	TTATAA	1 cut(s)	1581
Psp5II	RGGWCCY	2 cut(s)	359, 434
Psp6I	CCWGG	2 cut(s)	436, 1641
PspEI	GGTNACC	1 cut(s)	593
PspGI	CCWGG	2 cut(s)	436, 1641
PspN4I	GGNNCC	7 cut(s)	10, 360, 522, 1175, 1189, 1853, 1867
PspPI	GGNCC	3 cut(s)	359, 434, 1276
PspPPI	RGGWCCY	2 cut(s)	359, 434
PstNI	CAGNNNCTG	1 cut(s)	437
RsaI	GTAC	6 cut(s)	10, 878, 1258, 1478, 1936, 2058
RsaNI	GTAC	6 cut(s)	9, 877, 1257, 1477, 1935, 2057
RseI	CAYNNNNRTG	1 cut(s)	678
SalI	GTCGAC	1 cut(s)	51
Sau3AI	GATC	8 cut(s)	534, 769, 814, 1098, 1309, 1414, 1776, 1987
Sau96I	GGNCC	2 cut(s)	359, 434
SchI	GAGTC	2 cut(s)	48, 2030
ScrFI	CCNGG	2 cut(s)	438, 1643
SduI	GDGCHC	4 cut(s)	838, 973, 1438, 1651
SfaNI	GCATC	5 cut(s)	119, 483, 800, 1400, 2079
SfcI	CTRYAG	2 cut(s)	426, 773
SfoI	GGCGCC	3 cut(s)	522, 1189, 1867
Sfr274I	CTCGAG	1 cut(s)	638
SinI	GGWCC	3 cut(s)	359, 434, 1276
SlaI	CTCGAG	1 cut(s)	638
SmiMI	CAYNNNNRTG	1 cut(s)	678
SmlI	CTYRAG	1 cut(s)	638
SmoI	CTYRAG	1 cut(s)	638
Sse9I	AATT	6 cut(s)	920, 1350, 1520, 1610, 1629, 2013
SsiI	CCGC	3 cut(s)	87, 1091, 1769
SspDI	GGCGCC	3 cut(s)	520, 1187, 1865
SspMI	CTAG	3 cut(s)	114, 1266, 1944
StyD4I	CCNGG	2 cut(s)	436, 1641
StyI	CCWWGG	5 cut(s)	312, 943, 1305, 1543, 1983
TaaI	ACNGT	4 cut(s)	198, 210, 696, 2036
TaiI	ACGT	3 cut(s)	1165, 2062, 2107
TaqI	TCGA	5 cut(s)	52, 152, 510, 639, 664
TasI	AATT	6 cut(s)	920, 1350, 1520, 1610, 1629, 2013
TatI	WGTACW	2 cut(s)	876, 1476
TfiI	GAWTC	3 cut(s)	401, 416, 755
TscAI	CASTG	3 cut(s)	267, 852, 1452
TseFI	GTSAC	3 cut(s)	62, 593, 680
Tsp45I	GTSAC	3 cut(s)	62, 593, 680
TspDTI	ATGAA	8 cut(s)	401, 768, 941, 951, 1314, 1541, 1551, 1992
TspGWI	ACGGA	5 cut(s)	1257, 1935, 2086, 2086, 2101
TspRI	CASTG	3 cut(s)	267, 852, 1452
Van91I	CCANNNNNTGG	3 cut(s)	371, 1184, 1862
VpaK11BI	GGWCC	3 cut(s)	359, 434, 1276
XagI	CCTNNNNNAGG	2 cut(s)	1079, 1757
XapI	RAATTY	2 cut(s)	920, 1520
XbaI	TCTAGA	1 cut(s)	113
XceI	RCATGY	1 cut(s)	590
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1217
XhoI	CTCGAG	1 cut(s)	638
XmiI	GTMKAC	1 cut(s)	52
XmnI	GAANNNNTTC	1 cut(s)	660
XspI	CTAG	3 cut(s)	114, 1266, 1944
Zsp2I	ATGCAT	3 cut(s)	588, 889, 1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.