Rh7AG292900

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
31933163 .. 31933549
387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG292900.1

Sequence Viewer

Length: 387 bp
ATGCTAAATGATAAGGGAAACACTGCAGTTTACTTGCTCTATGCTCATGCTCGGATCTGTTCTATAATGAGCAAATCTGGCAGAAACATAGAGGAATTGAAAAGAACAGGAGAAATTGTGCTGGATCATGTTGGGGAACGGCAATTGGCGCTTCATTTGCTAAAATTTTCTGAGGCTGTGGAGGAGAGCTGCACCACTCTATTGCCGAATGTTTTGACTGACTACCTCTACAGTTTATCAGAAATCTTCACCAAGTTCTATGAAGACTGCAAGGTTGTTGGGAGTTCACAGGAAACAAGTAGACTGTTGCTTTGTGAAGCAACAGCCTTAGTGATGAGGAAATCATGTTTTAATCTGCTCGGAATCGAACCTGTTAACAAGCTATAA

Protein Analysis

128

Amino Acids

14.4

Weight (kDa)

5.91

Isoelectric Point (pI)

54.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DALR_1 PF05746 12 - 128 1.5e-30 DALR anticodon binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 301
AclWI GGATC 2 cut(s) 62, 132
AcsI RAATTY 1 cut(s) 164
AgsI TTSAA 1 cut(s) 100
AluBI AGCT 2 cut(s) 189, 382
AluI AGCT 2 cut(s) 189, 382
AlwI GGATC 2 cut(s) 62, 132
ApeKI GCWGC 1 cut(s) 189
ApoI RAATTY 1 cut(s) 164
ArsI GACNNNNNNTTYG 2 cut(s) 294, 326
AspLEI GCGC 1 cut(s) 151
AsuHPI GGTGA 1 cut(s) 241
BbsI GAAGAC 1 cut(s) 270
BbvI GCAGC 1 cut(s) 176
BceAI ACGGC 1 cut(s) 155
BfmI CTRYAG 2 cut(s) 24, 229
BfoI RGCGCY 1 cut(s) 152
BisI GCNGC 1 cut(s) 190
BlsI GCNGC 1 cut(s) 191
BpiI GAAGAC 1 cut(s) 270
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
BseMII CTCAG 1 cut(s) 162
BseRI GAGGAG 1 cut(s) 197
BseXI GCAGC 1 cut(s) 176
BsgI GTGCAG 1 cut(s) 175
Bsp143I GATC 2 cut(s) 54, 124
BspCNI CTCAG 1 cut(s) 163
BspMAI CTGCAG 1 cut(s) 28
BspPI GGATC 2 cut(s) 62, 132
BssMI GATC 2 cut(s) 54, 124
Bst4CI ACNGT 2 cut(s) 233, 306
BstDEI CTNAG 2 cut(s) 171, 328
BstH2I RGCGCY 1 cut(s) 152
BstHHI GCGC 1 cut(s) 151
BstKTI GATC 2 cut(s) 57, 127
BstMBI GATC 2 cut(s) 54, 124
BstMWI GCNNNNNNNGC 3 cut(s) 78, 148, 157
BstSFI CTRYAG 2 cut(s) 24, 229
BstV1I GCAGC 1 cut(s) 176
BstV2I GAAGAC 1 cut(s) 270
BstX2I RGATCY 1 cut(s) 54
BstYI RGATCY 1 cut(s) 54
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 1 cut(s) 21
CfoI GCGC 1 cut(s) 151
CviAII CATG 3 cut(s) 47, 128, 345
CviJI RGCY 4 cut(s) 176, 189, 326, 382
CviKI_1 RGCY 4 cut(s) 176, 189, 326, 382
DdeI CTNAG 2 cut(s) 171, 328
DpnI GATC 2 cut(s) 56, 126
DpnII GATC 2 cut(s) 54, 124
FaeI CATG 3 cut(s) 50, 131, 348
FaiI YATR 8 cut(s) 42, 48, 65, 89, 129, 261, 346, 385
FatI CATG 3 cut(s) 46, 127, 344
FblI GTMKAC 1 cut(s) 301
Fnu4HI GCNGC 1 cut(s) 190
Fsp4HI GCNGC 1 cut(s) 190
GlaI GCGC 1 cut(s) 150
GluI GCNGC 1 cut(s) 190
HaeII RGCGCY 1 cut(s) 152
HhaI GCGC 1 cut(s) 151
Hin1II CATG 3 cut(s) 50, 131, 348
Hin6I GCGC 1 cut(s) 149
HinP1I GCGC 1 cut(s) 149
HincII GTYRAC 1 cut(s) 376
HindII GTYRAC 1 cut(s) 376
HinfI GANTC 1 cut(s) 363
HpaI GTTAAC 1 cut(s) 376
HphI GGTGA 1 cut(s) 241
Hpy166II GTNNAC 4 cut(s) 31, 287, 302, 376
Hpy188I TCNGA 4 cut(s) 54, 172, 241, 362
Hpy8I GTNNAC 4 cut(s) 31, 287, 302, 376
HpyCH4III ACNGT 2 cut(s) 233, 306
HpyCH4V TGCA 3 cut(s) 26, 192, 270
HpyF10VI GCNNNNNNNGC 3 cut(s) 78, 148, 157
HpyF3I CTNAG 2 cut(s) 171, 328
Hsp92II CATG 3 cut(s) 50, 131, 348
HspAI GCGC 1 cut(s) 149
KspAI GTTAAC 1 cut(s) 376
Kzo9I GATC 2 cut(s) 54, 124
LpnPI CCDG 4 cut(s) 63, 93, 107, 275
Lsp1109I GCAGC 1 cut(s) 176
MalI GATC 2 cut(s) 56, 126
MboI GATC 2 cut(s) 54, 124
MboII GAAGA 2 cut(s) 238, 275
MfeI CAATTG 1 cut(s) 143
MflI RGATCY 1 cut(s) 54
MluCI AATT 4 cut(s) 95, 114, 143, 164
MnlI CCTC 5 cut(s) 85, 166, 175, 236, 330
MseI TTAA 2 cut(s) 351, 375
MunI CAATTG 1 cut(s) 143
MwoI GCNNNNNNNGC 3 cut(s) 78, 148, 157
NdeII GATC 2 cut(s) 54, 124
NlaIII CATG 3 cut(s) 50, 131, 348
PfeI GAWTC 1 cut(s) 363
PkrI GCNGC 1 cut(s) 191
PstI CTGCAG 1 cut(s) 28
PsuI RGATCY 1 cut(s) 54
SaqAI TTAA 2 cut(s) 351, 375
SatI GCNGC 1 cut(s) 190
Sau3AI GATC 2 cut(s) 54, 124
SetI ASST 5 cut(s) 191, 228, 276, 373, 384
SfcI CTRYAG 2 cut(s) 24, 229
Sse9I AATT 4 cut(s) 95, 114, 143, 164
TaaI ACNGT 2 cut(s) 233, 306
TaqI TCGA 1 cut(s) 366
TasI AATT 4 cut(s) 95, 114, 143, 164
TfiI GAWTC 1 cut(s) 363
Tru1I TTAA 2 cut(s) 351, 375
Tru9I TTAA 2 cut(s) 351, 375
TscAI CASTG 1 cut(s) 28
TseI GCWGC 1 cut(s) 189
TspDTI ATGAA 2 cut(s) 143, 276
TspRI CASTG 1 cut(s) 28
XapI RAATTY 1 cut(s) 164
XmiI GTMKAC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.