Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001528

Physical Location & Seq

Genomic Coordinates Forward (+)

15853760 .. 15858186

Gene Structure 4427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1199100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGCTTATTGATGGTATCGAGAAATGGGCGCCACAGCTACCGATCAAAAGGGCTGTGGTTGACTTTTCCTCGCCTAATATAGCTAAAGAAATGCATGTGGGTCACCTAAGGTCAACTATTATTGGGGATACGCTAGCCCGTATTCTCGAGTTTTCAAATGTAGAAGTTCTTCGACGAAATCATGTTGGTGACTGGGGGACACAGTTCCCAAGCATAGAAGATGTTAATGAATCGGCTATTGGTGATCTACAGGCATTCTATAAAGCATCAAAAAGAGATTTGATTGATCCTGCTTTTAAAGTGAGCACAACGCGGCCAGTGGTTTCCTTCAGTAAAATTCAAAGGTGGAGAACCAAGTACAGAAATGCATGGCTGAAAATCTGCGAAATCAGCCGTAAAGAATTCCACAAGGTCTATGAACGCCTTGGAGTTCATTTAGAGGAAAAGGGAGAGAGTTTTTATAACCCATATATTCCTGGGGTTTTAAAAGAATTGAGTGATAAAGGCTTAATTGAGGAAAGCCAGGGTGCTCGTGTAATCTTTCTGGAAGGGTTTAACATCCCTCTTATTGTTGTCAAGAGCGATGGTGGTTTCAACTATGCTTCAACTGATTTAGCAGCCCTTTGGTATCGCCTTAATGAGGAGAAAGCGGATTGGATCATATATGTTACTGATGTTGGCCAGCAGCAGCATTTTAATATGTTTTTTGAGGCAGCTAAACGTGCAGGTTGGCTCCCAACTGATGGCGCCTTGAAACCAAAGGTTACCCATGTTGGTTTTGGTCTTGTTCTTGGAGAAGACGGAAAACGCTTTCGTACTCGCTCTAGTGAGGTGGTCCGATTGGTTGATTTGCTAGATGAAGCCAAGGATCGTAGCAAAAAGGTTCTTGTTGAACGTGGCTGGACTGAGCAGGAGCTTAATCAAATTGCTGAGGCTGTTGGTTATGGTGCTGTTAAGTATGCTGATCTGAAGAACAATAGATTAACCAATTACACGTTTGATTTTGATCAAATGCTAAGTGATAAGGGAAACACTGCTGTTTACTTACTCTATGCTCATGCTCGGATCTGTTCCATAATAAGGAAATCTGGCAAAAACATAGAAGAATTGAAACAAAAGGGGGAAATCGTGTTGGATCATGATGGTGAGCGTGAATTGGGGCTTCATTTGCTACAGTTTTCAGAGAACGTGGAGGAGACCTGCACTAATCTATTGCCGAATGTTTTGTGTGAATACCTATACAATTTATCAGAGGTCTTCACCAAAAAATTCTACTCCAATTGCCAGGTTGTCGGGTCTCCCGAGGAAACGAGCAGGCTCTTGCTCTGTGAAGCAACAGCCATTGTGATGAGGAAATGTTTTAATCTGCTCGGTATCGAACCGGTTTACAAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004814 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006420 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Arg_tRNA_synt_N DALR_1 tRNA-synt_1d

Protein Analysis

466

Amino Acids

53.06

Weight (kDa)

6.41

Isoelectric Point (pI)

41.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1d	PF00750	16 - 335	2.2e-102	tRNA synthetases class I (R), catalytic domain
DALR_1	PF05746	349 - 464	1.5e-30	DALR anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66530 AT4G26300 AT4G26300 AT4G26300 AT4G26300 AT4G26300
fragaria_vesca	FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400 FvH4_1g06400
malus_domestica	MD02G1067300.v1.1 MD15G1198200.v1.1 MD15G1199100.v1.1
prunus_persica	Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1 Prupe.7G218100_v2.0.a1
pyrus_communis	pycom02g05330 pycom15g17660
rosa_chinensis	RchiOBHm_Chr2g0092141 RchiOBHm_Chr3g0454631 RchiOBHm_Chr3g0454641 RchiOBHm_Chr7g0215671
rosa_laevigata	RLG00000016278 RLG00000025428
rosa_multiflora	Rmu_co8501171.1_g000001 Rmu_sc0000898.1_g000026 Rmu_sc0001792.1_g000032 Rmu_sc0001792.1_g000033 Rmu_sc0013552.1_g000004
rosa_roxburghii	Rroxscaffold_2G00149440 Rroxscaffold_3G00243930
rosa_rugosa	Rorug02G0023000 Rorug02G0023100 Rorug02G0023200 Rorug03G0000700 Rorug03G0000800 Rorug07G0156100
rosa_samantha	Rh2AG068800 Rh2BG068100 Rh2CG069300 Rh2DG067400 Rh3DG062300 Rh7AG292900 Rh7BG285300 Rh7CG313000 Rh7DG296400
rosa_wichuraiana	Rw2G006350 Rw7G024930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	462
Acc36I	ACCTGC	2 cut(s)	716, 1208
AccB1I	GGYRCC	2 cut(s)	28, 746
AccB7I	CCANNNNNTGG	1 cut(s)	743
AccII	CGCG	1 cut(s)	313
AciI	CCGC	2 cut(s)	313, 650
AclWI	GGATC	5 cut(s)	281, 665, 876, 1073, 1143
AcoI	YGGCCR	2 cut(s)	314, 679
AcsI	RAATTY	3 cut(s)	336, 401, 1268
AcuI	CTGAAG	2 cut(s)	313, 989
AcyI	GRCGYC	2 cut(s)	29, 747
AfaI	GTAC	2 cut(s)	359, 817
AfiI	CCNNNNNNNGG	3 cut(s)	640, 743, 1080
AflIII	ACRYGT	1 cut(s)	993
AgeI	ACCGGT	1 cut(s)	1381
AgsI	TTSAA	7 cut(s)	156, 341, 595, 606, 754, 893, 1111
AjnI	CCWGG	3 cut(s)	475, 522, 1284
AjuI	GAANNNNNNNTTGG	2 cut(s)	222, 254
AluBI	AGCT	4 cut(s)	37, 83, 716, 916
AluI	AGCT	4 cut(s)	37, 83, 716, 916
Alw21I	GWGCWC	2 cut(s)	308, 532
Alw26I	GTCTC	2 cut(s)	1190, 1302
AlwI	GGATC	5 cut(s)	281, 665, 876, 1073, 1143
Ama87I	CYCGRG	2 cut(s)	146, 1301
AoxI	GGCC	2 cut(s)	314, 679
ApeKI	GCWGC	4 cut(s)	617, 685, 688, 713
ApoI	RAATTY	3 cut(s)	336, 401, 1268
AsiGI	ACCGGT	1 cut(s)	1381
Asp700I	GAANNNNTTC	1 cut(s)	168
AspLEI	GCGC	2 cut(s)	31, 749
AspS9I	GGNCC	1 cut(s)	835
AsuHPI	GGTGA	5 cut(s)	95, 200, 254, 1157, 1252
AsuNHI	GCTAGC	1 cut(s)	133
AvaI	CYCGRG	2 cut(s)	146, 1301
AvaII	GGWCC	1 cut(s)	835
AxyI	CCTNAGG	1 cut(s)	107
BalI	TGGCCA	1 cut(s)	681
BanI	GGYRCC	2 cut(s)	28, 746
BarI	GAAGNNNNNNTAC	2 cut(s)	153, 185
BauI	CACGAG	1 cut(s)	531
BbsI	GAAGAC	2 cut(s)	804, 1249
Bbv12I	GWGCWC	2 cut(s)	308, 532
BbvCI	CCTCAGC	1 cut(s)	930
BbvI	GCAGC	4 cut(s)	629, 697, 700, 725
BccI	CCATC	4 cut(s)	5, 578, 737, 1136
BceAI	ACGGC	1 cut(s)	378
BciT130I	CCWGG	3 cut(s)	477, 524, 1286
BciVI	GTATCC	1 cut(s)	121
BclI	TGATCA	1 cut(s)	1006
BcoDI	GTCTC	2 cut(s)	1190, 1302
BfaI	CTAG	3 cut(s)	134, 825, 854
BfmI	CTRYAG	2 cut(s)	248, 1172
BfoI	RGCGCY	2 cut(s)	32, 750
BfuAI	ACCTGC	2 cut(s)	716, 1208
BfuI	GTATCC	1 cut(s)	121
BisI	GCNGC	5 cut(s)	314, 618, 686, 689, 714
BlsI	GCNGC	5 cut(s)	315, 619, 687, 690, 715
Bme1390I	CCNGG	3 cut(s)	477, 524, 1286
Bme18I	GGWCC	1 cut(s)	835
BmeT110I	CYCGRG	2 cut(s)	146, 1301
BmgT120I	GGNCC	1 cut(s)	835
BmiI	GGNNCC	3 cut(s)	30, 734, 748
BmrFI	CCNGG	3 cut(s)	477, 524, 1286
BmrI	ACTGGG	1 cut(s)	202
BmsI	GCATC	1 cut(s)	275
BmtI	GCTAGC	1 cut(s)	137
BmuI	ACTGGG	1 cut(s)	202
BpiI	GAAGAC	2 cut(s)	804, 1249
Bpu10I	CCTNAGC	1 cut(s)	930
BsaBI	GATNNNNATC	1 cut(s)	1005
BsaHI	GRCGYC	2 cut(s)	29, 747
BsaI	GGTCTC	2 cut(s)	1190, 1302
BsaJI	CCNNGG	5 cut(s)	424, 476, 523, 864, 1302
BsaWI	WCCGGW	1 cut(s)	1381
Bsc4I	CCNNNNNNNGG	3 cut(s)	640, 743, 1080
Bse118I	RCCGGY	1 cut(s)	1381
Bse1I	ACTGG	2 cut(s)	197, 317
Bse21I	CCTNAGG	1 cut(s)	107
Bse8I	GATNNNNATC	1 cut(s)	1005
BseBI	CCWGG	3 cut(s)	477, 524, 1286
BseDI	CCNNGG	5 cut(s)	424, 476, 523, 864, 1302
BseGI	GGATG	1 cut(s)	558
BseJI	GATNNNNATC	1 cut(s)	1005
BseLI	CCNNNNNNNGG	3 cut(s)	640, 743, 1080
BseMII	CTCAG	2 cut(s)	897, 921
BseNI	ACTGG	2 cut(s)	197, 317
BseRI	GAGGAG	2 cut(s)	656, 1208
BseXI	GCAGC	4 cut(s)	629, 697, 700, 725
BsgI	GTGCAG	2 cut(s)	744, 1186
Bsh1236I	CGCG	1 cut(s)	313
BshFI	GGCC	2 cut(s)	316, 681
BshNI	GGYRCC	2 cut(s)	28, 746
BshTI	ACCGGT	1 cut(s)	1381
BsiHKAI	GWGCWC	2 cut(s)	308, 532
BsiHKCI	CYCGRG	2 cut(s)	146, 1301
BsiSI	CCGG	1 cut(s)	1382
BslFI	GGGAC	1 cut(s)	211
BslI	CCNNNNNNNGG	3 cut(s)	640, 743, 1080
BsmAI	GTCTC	2 cut(s)	1190, 1302
BsmFI	GGGAC	1 cut(s)	211
BsmI	GAATGC	1 cut(s)	254
BsnI	GGCC	2 cut(s)	316, 681
Bso31I	GGTCTC	2 cut(s)	1190, 1302
BsoBI	CYCGRG	2 cut(s)	146, 1301
Bsp1286I	GDGCHC	2 cut(s)	308, 532
Bsp143I	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
BspACI	CCGC	2 cut(s)	313, 650
BspANI	GGCC	2 cut(s)	316, 681
BspCNI	CTCAG	2 cut(s)	898, 922
BspFNI	CGCG	1 cut(s)	313
BspHI	TCATGA	1 cut(s)	1138
BspLI	GGNNCC	3 cut(s)	30, 734, 748
BspMI	ACCTGC	2 cut(s)	716, 1208
BspOI	GCTAGC	1 cut(s)	137
BspPI	GGATC	5 cut(s)	281, 665, 876, 1073, 1143
BspT107I	GGYRCC	2 cut(s)	28, 746
BspTNI	GGTCTC	2 cut(s)	1190, 1302
BsrFI	RCCGGY	1 cut(s)	1381
BsrI	ACTGG	2 cut(s)	197, 317
BssAI	RCCGGY	1 cut(s)	1381
BssECI	CCNNGG	5 cut(s)	424, 476, 523, 864, 1302
BssMI	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
BssNI	GRCGYC	2 cut(s)	29, 747
BssSI	CACGAG	1 cut(s)	531
BssT1I	CCWWGG	2 cut(s)	424, 864
Bst2BI	CACGAG	1 cut(s)	531
Bst2UI	CCWGG	3 cut(s)	477, 524, 1286
Bst4CI	ACNGT	2 cut(s)	204, 1176
BstACI	GRCGYC	2 cut(s)	29, 747
BstC8I	GCNNGC	3 cut(s)	135, 683, 1316
BstDEI	CTNAG	4 cut(s)	107, 906, 930, 1016
BstEII	GGTNACC	2 cut(s)	101, 763
BstENI	CCTNNNNNAGG	1 cut(s)	638
BstF5I	GGATG	1 cut(s)	558
BstFNI	CGCG	1 cut(s)	313
BstH2I	RGCGCY	2 cut(s)	32, 750
BstHHI	GCGC	2 cut(s)	31, 749
BstKTI	GATC	9 cut(s)	45, 247, 289, 660, 871, 967, 1009, 1068, 1138
BstMAI	GTCTC	2 cut(s)	1190, 1302
BstMBI	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
BstMWI	GCNNNNNNNGC	3 cut(s)	390, 722, 1168
BstNI	CCWGG	3 cut(s)	477, 524, 1286
BstNSI	RCATGY	1 cut(s)	98
BstPI	GGTNACC	2 cut(s)	101, 763
BstSCI	CCNGG	3 cut(s)	475, 522, 1284
BstSFI	CTRYAG	2 cut(s)	248, 1172
BstUI	CGCG	1 cut(s)	313
BstV1I	GCAGC	4 cut(s)	629, 697, 700, 725
BstV2I	GAAGAC	2 cut(s)	804, 1249
BstX2I	RGATCY	1 cut(s)	1065
BstYI	RGATCY	1 cut(s)	1065
Bsu36I	CCTNAGG	1 cut(s)	107
BsuI	GTATCC	1 cut(s)	121
BsuRI	GGCC	2 cut(s)	316, 681
BtgZI	GCGATG	1 cut(s)	597
BtsCI	GGATG	1 cut(s)	558
BtsI	GCAGTG	1 cut(s)	1032
BtsIMutI	CAGTG	2 cut(s)	324, 1032
BveI	ACCTGC	2 cut(s)	716, 1208
Cac8I	GCNNGC	3 cut(s)	135, 683, 1316
CciI	TCATGA	1 cut(s)	1138
CfoI	GCGC	2 cut(s)	31, 749
Cfr10I	RCCGGY	1 cut(s)	1381
Cfr13I	GGNCC	1 cut(s)	835
Csp6I	GTAC	2 cut(s)	358, 816
CspAI	ACCGGT	1 cut(s)	1381
CviAII	CATG	6 cut(s)	95, 182, 369, 770, 1058, 1139
CviQI	GTAC	2 cut(s)	358, 816
DdeI	CTNAG	4 cut(s)	107, 906, 930, 1016
DinI	GGCGCC	2 cut(s)	30, 748
DpnI	GATC	9 cut(s)	44, 246, 288, 659, 870, 966, 1008, 1067, 1137
DpnII	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
DraI	TTTAAA	2 cut(s)	298, 486
EaeI	YGGCCR	2 cut(s)	314, 679
Eco130I	CCWWGG	2 cut(s)	424, 864
Eco31I	GGTCTC	2 cut(s)	1190, 1302
Eco47I	GGWCC	1 cut(s)	835
Eco57I	CTGAAG	2 cut(s)	313, 989
Eco81I	CCTNAGG	1 cut(s)	107
Eco88I	CYCGRG	2 cut(s)	146, 1301
Eco91I	GGTNACC	2 cut(s)	101, 763
EcoNI	CCTNNNNNAGG	1 cut(s)	638
EcoO65I	GGTNACC	2 cut(s)	101, 763
EcoRI	GAATTC	1 cut(s)	401
EcoRII	CCWGG	3 cut(s)	475, 522, 1284
EcoT14I	CCWWGG	2 cut(s)	424, 864
EcoT22I	ATGCAT	2 cut(s)	96, 370
EgeI	GGCGCC	2 cut(s)	30, 748
EheI	GGCGCC	2 cut(s)	30, 748
ErhI	CCWWGG	2 cut(s)	424, 864
FaeI	CATG	6 cut(s)	98, 185, 372, 773, 1061, 1142
FaqI	GGGAC	1 cut(s)	211
FatI	CATG	6 cut(s)	94, 181, 368, 769, 1057, 1138
FbaI	TGATCA	1 cut(s)	1006
Fnu4HI	GCNGC	5 cut(s)	314, 618, 686, 689, 714
FokI	GGATG	1 cut(s)	545
Fsp4HI	GCNGC	5 cut(s)	314, 618, 686, 689, 714
FspBI	CTAG	3 cut(s)	134, 825, 854
GlaI	GCGC	2 cut(s)	30, 748
GluI	GCNGC	5 cut(s)	314, 618, 686, 689, 714
HaeII	RGCGCY	2 cut(s)	32, 750
HaeIII	GGCC	2 cut(s)	316, 681
HapII	CCGG	1 cut(s)	1382
HhaI	GCGC	2 cut(s)	31, 749
Hin1I	GRCGYC	2 cut(s)	29, 747
Hin1II	CATG	6 cut(s)	98, 185, 372, 773, 1061, 1142
Hin6I	GCGC	2 cut(s)	29, 747
HinP1I	GCGC	2 cut(s)	29, 747
HincII	GTYRAC	2 cut(s)	61, 114
HindII	GTYRAC	2 cut(s)	61, 114
HinfI	GANTC	1 cut(s)	230
HpaII	CCGG	1 cut(s)	1382
HphI	GGTGA	5 cut(s)	95, 200, 254, 1157, 1252
Hpy166II	GTNNAC	4 cut(s)	61, 114, 1042, 1387
Hpy188I	TCNGA	5 cut(s)	839, 969, 1065, 1183, 1252
Hpy188III	TCNNGA	6 cut(s)	19, 146, 545, 577, 1139, 1301
Hpy8I	GTNNAC	4 cut(s)	61, 114, 1042, 1387
Hpy99I	CGWCG	1 cut(s)	177
HpyAV	CCTTC	2 cut(s)	337, 542
HpyCH4III	ACNGT	2 cut(s)	204, 1176
HpyCH4IV	ACGT	4 cut(s)	721, 895, 995, 1188
HpyCH4V	TGCA	4 cut(s)	94, 368, 725, 1203
HpyF10VI	GCNNNNNNNGC	3 cut(s)	390, 722, 1168
HpyF3I	CTNAG	4 cut(s)	107, 906, 930, 1016
HpySE526I	ACGT	4 cut(s)	721, 895, 995, 1188
Hsp92I	GRCGYC	2 cut(s)	29, 747
Hsp92II	CATG	6 cut(s)	98, 185, 372, 773, 1061, 1142
HspAI	GCGC	2 cut(s)	29, 747
KasI	GGCGCC	2 cut(s)	28, 746
Ksp22I	TGATCA	1 cut(s)	1006
Kzo9I	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
LmnI	GCTCC	2 cut(s)	738, 913
Lsp1109I	GCAGC	4 cut(s)	629, 697, 700, 725
LweI	GCATC	1 cut(s)	275
MaeI	CTAG	3 cut(s)	134, 825, 854
MaeII	ACGT	4 cut(s)	721, 895, 995, 1188
MaeIII	GTNAC	4 cut(s)	101, 188, 667, 763
MalI	GATC	9 cut(s)	44, 246, 288, 659, 870, 966, 1008, 1067, 1137
MboI	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
MboII	GAAGA	6 cut(s)	161, 230, 809, 982, 1115, 1249
MfeI	CAATTG	1 cut(s)	1279
MflI	RGATCY	1 cut(s)	1065
MhlI	GDGCHC	2 cut(s)	308, 532
MlsI	TGGCCA	1 cut(s)	681
MluNI	TGGCCA	1 cut(s)	681
Mly113I	GGCGCC	2 cut(s)	29, 747
MmeI	TCCRAC	1 cut(s)	1113
Mox20I	TGGCCA	1 cut(s)	681
Mph1103I	ATGCAT	2 cut(s)	96, 370
MroXI	GAANNNNTTC	1 cut(s)	168
MscI	TGGCCA	1 cut(s)	681
MslI	CAYNNNNRTG	3 cut(s)	186, 1143, 1346
Msp20I	TGGCCA	1 cut(s)	681
MspI	CCGG	1 cut(s)	1382
MspR9I	CCNGG	3 cut(s)	477, 524, 1286
MunI	CAATTG	1 cut(s)	1279
Mva1269I	GAATGC	1 cut(s)	254
MvaI	CCWGG	3 cut(s)	477, 524, 1286
MvnI	CGCG	1 cut(s)	313
MwoI	GCNNNNNNNGC	3 cut(s)	390, 722, 1168
NarI	GGCGCC	2 cut(s)	29, 747
NdeII	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
NheI	GCTAGC	1 cut(s)	133
NlaIII	CATG	6 cut(s)	98, 185, 372, 773, 1061, 1142
NlaIV	GGNNCC	3 cut(s)	30, 734, 748
NmuCI	GTSAC	2 cut(s)	101, 188
NsiI	ATGCAT	2 cut(s)	96, 370
NspI	RCATGY	1 cut(s)	98
PaeR7I	CTCGAG	1 cut(s)	146
PagI	TCATGA	1 cut(s)	1138
PcsI	WCGNNNNNNNCGW	1 cut(s)	1299
PctI	GAATGC	1 cut(s)	254
PdmI	GAANNNNTTC	1 cut(s)	168
PfeI	GAWTC	1 cut(s)	230
PflMI	CCANNNNNTGG	1 cut(s)	743
PinAI	ACCGGT	1 cut(s)	1381
PkrI	GCNGC	5 cut(s)	315, 619, 687, 690, 715
PluTI	GGCGCC	2 cut(s)	32, 750
PsiI	TTATAA	1 cut(s)	462
Psp6I	CCWGG	3 cut(s)	475, 522, 1284
PspEI	GGTNACC	2 cut(s)	101, 763
PspGI	CCWGG	3 cut(s)	475, 522, 1284
PspN4I	GGNNCC	3 cut(s)	30, 734, 748
PspPI	GGNCC	1 cut(s)	835
PsuI	RGATCY	1 cut(s)	1065
RsaI	GTAC	2 cut(s)	359, 817
RsaNI	GTAC	2 cut(s)	358, 816
RseI	CAYNNNNRTG	3 cut(s)	186, 1143, 1346
SatI	GCNGC	5 cut(s)	314, 618, 686, 689, 714
Sau3AI	GATC	9 cut(s)	42, 244, 286, 657, 868, 964, 1006, 1065, 1135
Sau96I	GGNCC	1 cut(s)	835
ScrFI	CCNGG	3 cut(s)	477, 524, 1286
SduI	GDGCHC	2 cut(s)	308, 532
SfaNI	GCATC	1 cut(s)	275
SfcI	CTRYAG	2 cut(s)	248, 1172
SfoI	GGCGCC	2 cut(s)	30, 748
Sfr274I	CTCGAG	1 cut(s)	146
SinI	GGWCC	1 cut(s)	835
SlaI	CTCGAG	1 cut(s)	146
SmiMI	CAYNNNNRTG	3 cut(s)	186, 1143, 1346
SmlI	CTYRAG	1 cut(s)	146
SmoI	CTYRAG	1 cut(s)	146
SsiI	CCGC	2 cut(s)	313, 650
SspDI	GGCGCC	2 cut(s)	28, 746
SspMI	CTAG	3 cut(s)	134, 825, 854
StyD4I	CCNGG	3 cut(s)	475, 522, 1284
StyI	CCWWGG	2 cut(s)	424, 864
TaaI	ACNGT	2 cut(s)	204, 1176
TaiI	ACGT	4 cut(s)	724, 898, 998, 1191
TaqI	TCGA	4 cut(s)	18, 147, 172, 1377
TatI	WGTACW	1 cut(s)	357
TauI	GCSGC	1 cut(s)	316
TfiI	GAWTC	1 cut(s)	230
TscAI	CASTG	2 cut(s)	324, 1039
TseFI	GTSAC	2 cut(s)	101, 188
TseI	GCWGC	4 cut(s)	617, 685, 688, 713
Tsp45I	GTSAC	2 cut(s)	101, 188
TspDTI	ATGAA	5 cut(s)	243, 422, 432, 873, 1154
TspGWI	ACGGA	1 cut(s)	816
TspRI	CASTG	2 cut(s)	324, 1039
Van91I	CCANNNNNTGG	1 cut(s)	743
VpaK11BI	GGWCC	1 cut(s)	835
XagI	CCTNNNNNAGG	1 cut(s)	638
XapI	RAATTY	3 cut(s)	336, 401, 1268
XceI	RCATGY	1 cut(s)	98
XcmI	CCANNNNNNNNNTGG	1 cut(s)	776
XhoI	CTCGAG	1 cut(s)	146
XmnI	GAANNNNTTC	1 cut(s)	168
XspI	CTAG	3 cut(s)	134, 825, 854
Zsp2I	ATGCAT	2 cut(s)	96, 370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.