MD04G1069600.v1.1

Phospholipase D

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
9533893 .. 9539852
5960 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1069600.v1.1.491

Sequence Viewer

Length: 2556 bp
ATGGCGTATCCTGCGTATACCGAATCGCTATCGTTTGGAGGCTCAGAGCATGGGCAGGGCCAACAAGTTTTGCCATTCAAGACTGCCAAAGGGTCTCTCAAGGTCTGTCTTTTACATGGCAACTTAGTTATATGGGTAATGGAGGCCAGAAACCTTCCTAACATGGACATGGTTCATAGGACTCTCGGCGACATGTTTGCTAAATTTCCCGGGAAGTTTGGCGGCAAGACCGAAGGGCAAGCGCCGCAGAAGATAACCAGTGATCCCTATGTAACAATTTCTGTGTCAGGTGCTGTGGTTGGGAGGACTTTTGTGATTAGTAATAGCGAAAACCCGGTTTGGGGGCAGCATTTTGATGTTCCAGTCGCGCATTATGCTTCGGAGGTGCAGTTTGTTGTGAAAGATAGTGATGTTGTGGGATCACAGATCATGGGTGCTGTGGGAATCCCGGTTGAGCAATTACTTTCTGGCATGAAAGTAGAGGGAACATTTCCGATACTTAATTCGAGCGGGAAAGCGTGTAAGCCTGGAGCCGTTTTGAGCTTGTCAATTCAGTATATCCCAATTGAAAAACTGACATTTTATGATCAGGGAGTAGGTTCGGATCCTGATCATCAAGGCGTCCCCGGCACTTACTTTCCTCTTAGGAGAGGCGGTAAGGTGACTCTGTATCAAGATGCACATGTTCATGATGGTCGCCTTCCCAATTTGGAGCTTGACGGCGGTGTTCAGTATGAGCAAGGGAATTGTTGGCAAGACATGTTCGATGCAATAAGTCAGGCCCGTCGCTTGATATACATTGCAGGGTGGTCTGTGTACCACAGAGTTAGATTGGTTCGGGATAAGAATGATGCCTCGGATTACATGTTAGGTGATCTTCTTAAGGCCAAATCACAGGAAGGTGTGAGAGTGCTGCTTCTTGTTTGGGATGATCCAACTTCCCGGAGAATTTTGGGATATAAAATGGAAGGGGTCATGCAAACCTCTGATGAGGAAACTCGGCGTTTCTTCAAGCACTCTTCAGTCCAAGTGCTGCTTTGCCCTCGATCTGTTGGGAAGGGTAGCTGGGTCAAAAAGCAGGAAGCCGAAACTATCTACACCCATCATCAGAAAACAGTGCTTGTGGATGCTGATGCAGGCAATTCTAAAAGAAAGATCATTGCATTTGTTGGAGGTCTTGATGTATGCCTGGGGCGCTATGACACTCCAGATCATCCAATCTTTAGGAGTTTACAGACAGTGCACAAAGATGACTGTCGTAACCCTACTTTCTCGGAGCGCTCTGTTGGTTGTCCAAGGCAGCCATGGCATGATTTGCACAGTAAAATTGATGGTCCAGCAGCATATGACATCCTTGCCAATTTTGAGGAGCGCTGGTTGAAGGCTTCAAAACCCCACGGGCTTCAAAAAATTAAAACACCGCATGATGATGCACTACTAAGGATTGAGAGAATTCCTGAAATTATTGGGATGGCGGAAGTTCCTTGCCTGAGTGGCGATGATCCAGAAGCTTGGGATATTCAGGTTTTCCGTTCAATTGATTCCAATTCTGTGAAAGGATTCCCGAAGGACTCAAAATATGCTACAAGCAAGAACCTGGTTTGTGGGAAGAATGTGCTAATAGACATGAGTATACATGCAGCATATGTCAAGGCAATCCGTGCGGCTCAACATTTCATTTACATAGAAAACCAGTACTTCCTTGGGTCATCATATAATTGGAACTTATACAGTGATTTGGGTGCAAACAATTTAATACCAATGGAAATTGCTCTTAAAATCGTAAACAAAATCAAAGAAAATAAGAGGTTTTCTGCATATATTGTTATCCCCATGTGGCCAGAAGGTGTTCCTTCAAGCACTCCTATTCAAAGAATTCTCTTTTGGCAGAATAAAACAATGCAAATGATGTACGAAATGATTTACAAGGCTCTAAAAGAGGCTGGACTTGAAAACAAGTATTGTCCACAAGACTACTTGAATTTCTTTTGCCTCGGGAATCGCGAAAAACCGAATGGTGAAGAAACTAGTGCTGCAAACAAAAAAGAAGCAAATACTCCCCTGGCACTCACTCGGAAGAATCGGCGTTTTATGATTTATGTCCATTCTAAAGGAATGATCGTGGATGATGAATATGTTATAATAGGATCTGCAAATATCAATCAGCGATCCTTGGAAGGTACCCGGGATACCGAAATAGCAATGGGAGCATACCAGCCTCATCACACCTGGGCTAGAAGACTCTCTAGTCCACATGGAAAGATATATGGATATAGAATGTCACTGTGGGCAGAGCATACAGGATGTCTTGAAGAATGTTTCAAGAAGCCGGAGAGTCTCGAATGCGTGAGACGGGTGCGATCCTTGAGCGAGCAGAACTGGAGGCAATACGTTACGGATGAGATGACAGAAATGAAGGCTCACCTCCTGAAATATCCGGTTGAAGTCGATCCAATGGGCAAGGTGAAGGCTATTCCGGGCTGCGAAACGTTTCCAGACGTTGGCGGCAACATACTGGGATCATTCAAAGCCATCCAAGAAAATCTCACCATCTGA

Protein Analysis

852

Amino Acids

95.75

Weight (kDa)

8.17

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 40 - 165 7.6e-16 C2 domain
PLDc_2 PF13091 684 - 735 7.1e-07 PLD-like domain
PLDc PF00614 699 - 724 2.1e-08 Phospholipase D Active site motif
PLD_C PF12357 771 - 841 2e-30 Phospholipase D C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2141
AasI GACNNNNNNGTC 1 cut(s) 2247
Acc65I GGTACC 1 cut(s) 2180
AccB1I GGYRCC 1 cut(s) 2180
AccB7I CCANNNNNTGG 1 cut(s) 2501
AccBSI CCGCTC 1 cut(s) 510
AccI GTMKAC 2 cut(s) 17, 1633
AccII CGCG 2 cut(s) 368, 2004
AciI CCGC 9 cut(s) 222, 245, 510, 654, 723, 1421, 1475, 1664, 2505
AclI AACGTT 1 cut(s) 2489
AcoI YGGCCR 1 cut(s) 1838
AcsI RAATTY 5 cut(s) 203, 948, 1452, 1875, 1981
AcuI CTGAAG 1 cut(s) 1005
AcyI GRCGYC 1 cut(s) 621
AfaI GTAC 4 cut(s) 818, 1697, 1913, 2182
AfeI AGCGCT 2 cut(s) 1280, 1373
AfiI CCNNNNNNNGG 3 cut(s) 340, 341, 2501
AflII CTTAAG 1 cut(s) 881
AflIII ACRYGT 4 cut(s) 192, 682, 759, 864
AhlI ACTAGT 1 cut(s) 2027
AjnI CCWGG 5 cut(s) 526, 1188, 1596, 2061, 2228
AjuI GAANNNNNNNTTGG 2 cut(s) 1867, 1899
AluBI AGCT 4 cut(s) 543, 715, 1065, 1511
AluI AGCT 4 cut(s) 543, 715, 1065, 1511
Alw21I GWGCWC 1 cut(s) 1245
Alw26I GTCTC 3 cut(s) 99, 2342, 2344
Alw44I GTGCAC 1 cut(s) 1241
AlwNI CAGNNNCTG 1 cut(s) 293
Ama87I CYCGRG 3 cut(s) 209, 1994, 2184
Aor51HI AGCGCT 2 cut(s) 1280, 1373
AoxI GGCC 5 cut(s) 58, 144, 780, 885, 1838
ApaLI GTGCAC 1 cut(s) 1241
ApeKI GCWGC 8 cut(s) 346, 913, 1033, 1300, 1340, 1640, 2033, 2481
ApoI RAATTY 5 cut(s) 203, 948, 1452, 1875, 1981
Asp700I GAANNNNTTC 3 cut(s) 1559, 1848, 2490
Asp718I GGTACC 1 cut(s) 2180
AspLEI GCGC 5 cut(s) 244, 370, 1197, 1281, 1374
AspS9I GGNCC 3 cut(s) 58, 781, 1334
AsuC2I CCSGG 9 cut(s) 210, 211, 335, 449, 627, 943, 2185, 2186, 2478
AsuHPI GGTGA 6 cut(s) 673, 884, 2030, 2414, 2476, 2539
AvaI CYCGRG 3 cut(s) 209, 1994, 2184
AvaII GGWCC 1 cut(s) 1334
BaeGI GKGCMC 1 cut(s) 1245
BalI TGGCCA 1 cut(s) 1840
BamHI GGATCC 1 cut(s) 604
BanI GGYRCC 1 cut(s) 2180
BbsI GAAGAC 1 cut(s) 2245
Bbv12I GWGCWC 1 cut(s) 1245
BbvI GCAGC 8 cut(s) 358, 900, 1020, 1312, 1352, 1652, 2020, 2468
BccI CCATC 5 cut(s) 686, 1110, 1325, 1465, 2540
BceAI ACGGC 2 cut(s) 518, 736
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 5 cut(s) 528, 1190, 1598, 2063, 2230
BciVI GTATCC 2 cut(s) 18, 2182
BclI TGATCA 2 cut(s) 586, 610
BcnI CCSGG 9 cut(s) 210, 211, 335, 449, 627, 943, 2185, 2186, 2478
BcoDI GTCTC 3 cut(s) 99, 2342, 2344
BcuI ACTAGT 1 cut(s) 2027
BfaI CTAG 3 cut(s) 2028, 2235, 2247
BfoI RGCGCY 4 cut(s) 245, 1198, 1282, 1375
BfrI CTTAAG 1 cut(s) 881
BfuI GTATCC 2 cut(s) 18, 2182
BglI GCCNNNNNGGC 1 cut(s) 1494
BmcAI AGTACT 1 cut(s) 1697
Bme18I GGWCC 1 cut(s) 1334
BmeT110I CYCGRG 3 cut(s) 209, 1994, 2184
BmgT120I GGNCC 3 cut(s) 58, 781, 1334
BmiI GGNNCC 3 cut(s) 532, 606, 2182
BmrI ACTGGG 1 cut(s) 2525
BmsI GCATC 6 cut(s) 667, 757, 841, 1117, 1123, 1420
BmuI ACTGGG 1 cut(s) 2525
BpiI GAAGAC 1 cut(s) 2245
BpmI CTGGAG 3 cut(s) 549, 1191, 2401
BpuEI CTTGAG 2 cut(s) 83, 2386
BpuMI CCSGG 9 cut(s) 210, 211, 335, 449, 627, 943, 2185, 2186, 2478
BsaBI GATNNNNATC 1 cut(s) 609
BsaHI GRCGYC 1 cut(s) 621
BsaI GGTCTC 1 cut(s) 99
BsaWI WCCGGW 1 cut(s) 2437
BsaXI ACNNNNNCTCC 6 cut(s) 374, 404, 640, 670, 1361, 1391
Bsc4I CCNNNNNNNGG 3 cut(s) 340, 341, 2501
Bse1I ACTGG 5 cut(s) 258, 362, 1693, 2384, 2520
Bse3DI GCAATG 3 cut(s) 798, 1158, 2208
Bse8I GATNNNNATC 1 cut(s) 609
BseBI CCWGG 5 cut(s) 528, 1190, 1598, 2063, 2230
BseGI GGATG 9 cut(s) 934, 1132, 1213, 1350, 1476, 2131, 2309, 2404, 2532
BseJI GATNNNNATC 1 cut(s) 609
BseLI CCNNNNNNNGG 3 cut(s) 340, 341, 2501
BseMI GCAATG 3 cut(s) 798, 1158, 2208
BseMII CTCAG 2 cut(s) 57, 1481
BseNI ACTGG 5 cut(s) 258, 362, 1693, 2384, 2520
BseRI GAGGAG 1 cut(s) 1382
BseSI GKGCMC 1 cut(s) 1245
BseXI GCAGC 8 cut(s) 358, 900, 1020, 1312, 1352, 1652, 2020, 2468
BseYI CCCAGC 1 cut(s) 1065
BsgI GTGCAG 1 cut(s) 407
Bsh1236I CGCG 2 cut(s) 368, 2004
BshFI GGCC 5 cut(s) 60, 146, 782, 887, 1840
BshNI GGYRCC 1 cut(s) 2180
BsiHKAI GWGCWC 1 cut(s) 1245
BsiHKCI CYCGRG 3 cut(s) 209, 1994, 2184
BsiSI CCGG 9 cut(s) 210, 335, 449, 627, 943, 2185, 2330, 2438, 2477
BslFI GGGAC 1 cut(s) 608
BslI CCNNNNNNNGG 3 cut(s) 340, 341, 2501
BsmAI GTCTC 3 cut(s) 99, 2342, 2344
BsmBI CGTCTC 1 cut(s) 2344
BsmFI GGGAC 1 cut(s) 608
BsmI GAATGC 1 cut(s) 2348
BsnI GGCC 5 cut(s) 60, 146, 782, 887, 1840
Bso31I GGTCTC 1 cut(s) 99
BsoBI CYCGRG 3 cut(s) 209, 1994, 2184
Bsp1286I GDGCHC 1 cut(s) 1245
Bsp19I CCATGG 1 cut(s) 1304
Bsp68I TCGCGA 1 cut(s) 2004
BspACI CCGC 9 cut(s) 222, 245, 510, 654, 723, 1421, 1475, 1664, 2505
BspANI GGCC 5 cut(s) 60, 146, 782, 887, 1840
BspCNI CTCAG 2 cut(s) 56, 1482
BspFNI CGCG 2 cut(s) 368, 2004
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 3 cut(s) 532, 606, 2182
BspT107I GGYRCC 1 cut(s) 2180
BspTI CTTAAG 1 cut(s) 881
BspTNI GGTCTC 1 cut(s) 99
BsrBI CCGCTC 1 cut(s) 510
BsrDI GCAATG 3 cut(s) 798, 1158, 2208
BsrI ACTGG 5 cut(s) 258, 362, 1693, 2384, 2520
BssNAI GTATAC 2 cut(s) 18, 1634
BssNI GRCGYC 1 cut(s) 621
BssT1I CCWWGG 4 cut(s) 1295, 1304, 1702, 2172
Bst1107I GTATAC 2 cut(s) 18, 1634
Bst2UI CCWGG 5 cut(s) 528, 1190, 1598, 2063, 2230
Bst4CI ACNGT 6 cut(s) 1117, 1240, 1256, 1322, 1733, 2286
Bst6I CTCTTC 1 cut(s) 1024
BstACI GRCGYC 1 cut(s) 621
BstAFI CTTAAG 1 cut(s) 881
BstAPI GCANNNNNTGC 2 cut(s) 1315, 1661
BstC8I GCNNGC 3 cut(s) 240, 1138, 2372
BstDEI CTNAG 5 cut(s) 43, 124, 644, 1439, 1490
BstDSI CCRYGG 2 cut(s) 1304, 1396
BstF5I GGATG 9 cut(s) 934, 1132, 1213, 1350, 1476, 2131, 2309, 2404, 2532
BstFNI CGCG 2 cut(s) 368, 2004
BstH2I RGCGCY 4 cut(s) 245, 1198, 1282, 1375
BstHHI GCGC 5 cut(s) 244, 370, 1197, 1281, 1374
BstMAI GTCTC 3 cut(s) 99, 2342, 2344
BstNI CCWGG 5 cut(s) 528, 1190, 1598, 2063, 2230
BstNSI RCATGY 5 cut(s) 196, 686, 763, 868, 1640
BstSLI GKGCMC 1 cut(s) 1245
BstUI CGCG 2 cut(s) 368, 2004
BstV1I GCAGC 8 cut(s) 358, 900, 1020, 1312, 1352, 1652, 2020, 2468
BstV2I GAAGAC 1 cut(s) 2245
BstX2I RGATCY 2 cut(s) 604, 2147
BstXI CCANNNNNNTGG 1 cut(s) 1512
BstYI RGATCY 2 cut(s) 604, 2147
BstZ17I GTATAC 2 cut(s) 18, 1634
BsuI GTATCC 2 cut(s) 18, 2182
BsuRI GGCC 5 cut(s) 60, 146, 782, 887, 1840
BtgI CCRYGG 2 cut(s) 1304, 1396
BtgZI GCGATG 1 cut(s) 1512
BtsCI GGATG 9 cut(s) 934, 1132, 1213, 1350, 1476, 2131, 2309, 2404, 2532
BtsIMutI CAGTG 5 cut(s) 265, 1122, 1245, 1738, 2282
BtuMI TCGCGA 1 cut(s) 2004
Cac8I GCNNGC 3 cut(s) 240, 1138, 2372
CaiI CAGNNNCTG 1 cut(s) 293
CciI TCATGA 1 cut(s) 688
CfoI GCGC 5 cut(s) 244, 370, 1197, 1281, 1374
Cfr13I GGNCC 3 cut(s) 58, 781, 1334
Cfr9I CCCGGG 2 cut(s) 209, 2184
CseI GACGC 1 cut(s) 610
CsiI ACCWGGT 1 cut(s) 1596
Csp6I GTAC 4 cut(s) 817, 1696, 1912, 2181
CviQI GTAC 4 cut(s) 817, 1696, 1912, 2181
DdeI CTNAG 5 cut(s) 43, 124, 644, 1439, 1490
DrdI GACNNNNNNGTC 1 cut(s) 2247
DseDI GACNNNNNNGTC 1 cut(s) 2247
EaeI YGGCCR 1 cut(s) 1838
Eam1104I CTCTTC 1 cut(s) 1024
EarI CTCTTC 1 cut(s) 1024
EciI GGCGGA 1 cut(s) 1490
Eco130I CCWWGG 4 cut(s) 1295, 1304, 1702, 2172
Eco31I GGTCTC 1 cut(s) 99
Eco47I GGWCC 1 cut(s) 1334
Eco47III AGCGCT 2 cut(s) 1280, 1373
Eco57I CTGAAG 1 cut(s) 1005
Eco88I CYCGRG 3 cut(s) 209, 1994, 2184
EcoRI GAATTC 2 cut(s) 1452, 1875
EcoRII CCWGG 5 cut(s) 526, 1188, 1596, 2061, 2228
EcoT14I CCWWGG 4 cut(s) 1295, 1304, 1702, 2172
ErhI CCWWGG 4 cut(s) 1295, 1304, 1702, 2172
Esp3I CGTCTC 1 cut(s) 2344
FalI AAGNNNNNCTT 2 cut(s) 1020, 1052
FaqI GGGAC 1 cut(s) 608
FauI CCCGC 1 cut(s) 503
FauNDI CATATG 2 cut(s) 1345, 1645
FbaI TGATCA 2 cut(s) 586, 610
FblI GTMKAC 2 cut(s) 17, 1633
FokI GGATG 9 cut(s) 941, 1139, 1200, 1337, 1483, 2138, 2316, 2411, 2519
FspBI CTAG 3 cut(s) 2028, 2235, 2247
GlaI GCGC 5 cut(s) 243, 369, 1196, 1280, 1373
GsaI CCCAGC 1 cut(s) 1069
GsuI CTGGAG 3 cut(s) 549, 1191, 2401
HaeII RGCGCY 4 cut(s) 245, 1198, 1282, 1375
HaeIII GGCC 5 cut(s) 60, 146, 782, 887, 1840
HapII CCGG 9 cut(s) 210, 335, 449, 627, 943, 2185, 2330, 2438, 2477
HgaI GACGC 1 cut(s) 610
HhaI GCGC 5 cut(s) 244, 370, 1197, 1281, 1374
Hin1I GRCGYC 1 cut(s) 621
Hin6I GCGC 5 cut(s) 242, 368, 1195, 1279, 1372
HinP1I GCGC 5 cut(s) 242, 368, 1195, 1279, 1372
HindIII AAGCTT 1 cut(s) 1509
HpaII CCGG 9 cut(s) 210, 335, 449, 627, 943, 2185, 2330, 2438, 2477
HphI GGTGA 6 cut(s) 673, 884, 2030, 2414, 2476, 2539
Hpy166II GTNNAC 8 cut(s) 18, 817, 1232, 1243, 1634, 1786, 1967, 2252
Hpy8I GTNNAC 8 cut(s) 18, 817, 1232, 1243, 1634, 1786, 1967, 2252
Hpy99I CGWCG 1 cut(s) 789
HpyCH4III ACNGT 6 cut(s) 1117, 1240, 1256, 1322, 1733, 2286
HpyCH4IV ACGT 3 cut(s) 2391, 2489, 2499
HpyF3I CTNAG 5 cut(s) 43, 124, 644, 1439, 1490
HpySE526I ACGT 3 cut(s) 2391, 2489, 2499
Hsp92I GRCGYC 1 cut(s) 621
HspAI GCGC 5 cut(s) 242, 368, 1195, 1279, 1372
KpnI GGTACC 1 cut(s) 2184
Ksp22I TGATCA 2 cut(s) 586, 610
LmnI GCTCC 5 cut(s) 530, 712, 1276, 1369, 2207
Lsp1109I GCAGC 8 cut(s) 358, 900, 1020, 1312, 1352, 1652, 2020, 2468
LweI GCATC 6 cut(s) 667, 757, 841, 1117, 1123, 1420
MabI ACCWGGT 1 cut(s) 1596
MaeI CTAG 3 cut(s) 2028, 2235, 2247
MaeII ACGT 3 cut(s) 2391, 2489, 2499
MaeIII GTNAC 5 cut(s) 271, 661, 1259, 2280, 2392
MbiI CCGCTC 1 cut(s) 510
MboII GAAGA 9 cut(s) 262, 869, 1000, 1011, 1621, 2033, 2089, 2250, 2324
MfeI CAATTG 2 cut(s) 564, 1536
MflI RGATCY 2 cut(s) 604, 2147
MhlI GDGCHC 1 cut(s) 1245
MlsI TGGCCA 1 cut(s) 1840
MluNI TGGCCA 1 cut(s) 1840
MlyI GAGTC 5 cut(s) 175, 658, 1565, 2235, 2344
MmeI TCCRAC 2 cut(s) 959, 1150
Mox20I TGGCCA 1 cut(s) 1840
MroXI GAANNNNTTC 3 cut(s) 1559, 1848, 2490
MscI TGGCCA 1 cut(s) 1840
MseI TTAA 5 cut(s) 501, 882, 1413, 1754, 1776
MslI CAYNNNNRTG 5 cut(s) 167, 354, 687, 1248, 1428
Msp20I TGGCCA 1 cut(s) 1840
MspCI CTTAAG 1 cut(s) 881
MspI CCGG 9 cut(s) 210, 335, 449, 627, 943, 2185, 2330, 2438, 2477
MunI CAATTG 2 cut(s) 564, 1536
Mva1269I GAATGC 1 cut(s) 2348
MvaI CCWGG 5 cut(s) 528, 1190, 1598, 2063, 2230
MvnI CGCG 2 cut(s) 368, 2004
NciI CCSGG 9 cut(s) 210, 211, 335, 449, 627, 943, 2185, 2186, 2478
NcoI CCATGG 1 cut(s) 1304
NdeI CATATG 2 cut(s) 1345, 1645
NlaIV GGNNCC 3 cut(s) 532, 606, 2182
NmeAIII GCCGAG 2 cut(s) 165, 979
NmuCI GTSAC 2 cut(s) 661, 2280
NruI TCGCGA 1 cut(s) 2004
NspI RCATGY 5 cut(s) 196, 686, 763, 868, 1640
PagI TCATGA 1 cut(s) 688
PciI ACATGT 4 cut(s) 192, 682, 759, 864
PcsI WCGNNNNNNNCGW 1 cut(s) 2001
PctI GAATGC 1 cut(s) 2348
PdmI GAANNNNTTC 3 cut(s) 1559, 1848, 2490
PfeI GAWTC 6 cut(s) 23, 444, 1541, 1560, 1999, 2080
PflMI CCANNNNNTGG 1 cut(s) 2501
PfoI TCCNGGA 1 cut(s) 941
PleI GAGTC 5 cut(s) 175, 658, 1565, 2235, 2343
PpsI GAGTC 5 cut(s) 175, 658, 1565, 2235, 2343
PscI ACATGT 4 cut(s) 192, 682, 759, 864
PsiI TTATAA 1 cut(s) 2141
Psp1406I AACGTT 1 cut(s) 2489
Psp6I CCWGG 5 cut(s) 526, 1188, 1596, 2061, 2228
PspFI CCCAGC 1 cut(s) 1065
PspGI CCWGG 5 cut(s) 526, 1188, 1596, 2061, 2228
PspN4I GGNNCC 3 cut(s) 532, 606, 2182
PspPI GGNCC 3 cut(s) 58, 781, 1334
PstNI CAGNNNCTG 1 cut(s) 293
PsuI RGATCY 2 cut(s) 604, 2147
RruI TCGCGA 1 cut(s) 2004
RsaI GTAC 4 cut(s) 818, 1697, 1913, 2182
RsaNI GTAC 4 cut(s) 817, 1696, 1912, 2181
RseI CAYNNNNRTG 5 cut(s) 167, 354, 687, 1248, 1428
SaqAI TTAA 5 cut(s) 501, 882, 1413, 1754, 1776
Sau96I GGNCC 3 cut(s) 58, 781, 1334
ScaI AGTACT 1 cut(s) 1697
SchI GAGTC 5 cut(s) 175, 658, 1565, 2235, 2344
SduI GDGCHC 1 cut(s) 1245
SexAI ACCWGGT 1 cut(s) 1596
SfaNI GCATC 6 cut(s) 667, 757, 841, 1117, 1123, 1420
SinI GGWCC 1 cut(s) 1334
SmaI CCCGGG 2 cut(s) 211, 2186
SmiMI CAYNNNNRTG 5 cut(s) 167, 354, 687, 1248, 1428
SmlI CTYRAG 3 cut(s) 98, 881, 2365
SmoI CTYRAG 3 cut(s) 98, 881, 2365
SpeI ACTAGT 1 cut(s) 2027
SsiI CCGC 9 cut(s) 222, 245, 510, 654, 723, 1421, 1475, 1664, 2505
SspMI CTAG 3 cut(s) 2028, 2235, 2247
StyI CCWWGG 4 cut(s) 1295, 1304, 1702, 2172
TaaI ACNGT 6 cut(s) 1117, 1240, 1256, 1322, 1733, 2286
TaiI ACGT 3 cut(s) 2394, 2492, 2502
TaqI TCGA 5 cut(s) 506, 765, 1045, 2340, 2448
TaqII GACCGA 1 cut(s) 245
TatI WGTACW 1 cut(s) 1695
TauI GCSGC 4 cut(s) 225, 247, 1667, 2508
TfiI GAWTC 6 cut(s) 23, 444, 1541, 1560, 1999, 2080
Tru1I TTAA 5 cut(s) 501, 882, 1413, 1754, 1776
Tru9I TTAA 5 cut(s) 501, 882, 1413, 1754, 1776
TscAI CASTG 5 cut(s) 265, 1122, 1245, 1738, 2289
TseFI GTSAC 2 cut(s) 661, 2280
TseI GCWGC 8 cut(s) 346, 913, 1033, 1300, 1340, 1640, 2033, 2481
Tsp45I GTSAC 2 cut(s) 661, 2280
TspDTI ATGAA 6 cut(s) 164, 488, 677, 1666, 2145, 2429
TspGWI ACGGA 3 cut(s) 1520, 1649, 2411
TspMI CCCGGG 2 cut(s) 209, 2184
TspRI CASTG 5 cut(s) 265, 1122, 1245, 1738, 2289
Van91I CCANNNNNTGG 1 cut(s) 2501
Vha464I CTTAAG 1 cut(s) 881
VneI GTGCAC 1 cut(s) 1241
VpaK11BI GGWCC 1 cut(s) 1334
XapI RAATTY 5 cut(s) 203, 948, 1452, 1875, 1981
XceI RCATGY 5 cut(s) 196, 686, 763, 868, 1640
XcmI CCANNNNNNNNNTGG 2 cut(s) 1302, 1700
XmaI CCCGGG 2 cut(s) 209, 2184
XmiI GTMKAC 2 cut(s) 17, 1633
XmnI GAANNNNTTC 3 cut(s) 1559, 1848, 2490
XspI CTAG 3 cut(s) 2028, 2235, 2247
ZrmI AGTACT 1 cut(s) 1697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.