Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0001557

Physical Location & Seq

Genomic Coordinates Reverse (-)

16101630 .. 16108747

Gene Structure 7118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG181200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGCCAATCCTACTTACCAGGAATCCTTGTCATTTGGAGGCCCAGACCATCCTCAGGGTCAAGAAGAAGTTATTCCATGTGAGAGTGGAACCCTGAAGGTTTTGCTACATGGGTCCCTAGTCATTTGGGTCAAGGAGGCCAAAAACCTTCCTGACATGGAGACTTTCCGCAAGCTTGTGGGGCTTGCAATTTCGAAGTTGCCTGGGACGAGCCGCAAAAATATAATCAGTTCTCCATATGTTACGATTTCTTTATCAAATGTTGTAATTGCGAGGACCTTTGTGAAGAGTAGTATCGAGAACCCTGTGTGTGATGTTTTCGGCTCTAAGACCATAGGTTTTGTTGGAATCTCAGCTCAACAGTTGTACTCTGGCATCAAAGTTGAGGGAACCTTCCCTATCCTTGACATCACCAGTGGTAAAAGCTATATGCTTGGAGTTGTGTTGAGCTTGTCAATTCAGTATACCGCGATTGAGAAAATGGCATTTTATAATCGCGGAGTAGGTTTAGATCCTGATCATCAAGGGGTCCCTGGTACTTACTTTCCTGTTAGGAAAGGCAGTAAAGTTACTCTTTATCAAGATGCTCATGTTCCTGATCTTGATGGCGATCTTAAGTACGAGCATGGAAATTGTTGGCAAGACATATTTGATGCAATAAGTCAGGCCCGCCGTTTGATATACATAACTGGGTGGTCACTGCACCCCAAAGTCAGATTGCTTCGGAATAATAATGGTTCATCAGATAGCACATTATGTGATCTGCTGAAGACCAAGTCACAGGAAGGTGTGAAAGTTCTGCTTCTTGTTTGGGACGATCCAACTTCTATTAAGGGATTTAAAATGGAAGGGCTCATGCATACCAATGATGAAGACGCTCGACGTTTCTTTAAGGACTCTCCAGTTCCATTTCTACTCTGCCCTCGATCGTCAGTCCAAAGCTGGGGGAAAAAGATGGAAGCTGGAATAGTCTATACCCATCATCAGAAAACTGTAATTGTGGACGCTGATGCTGGTCATTTTAAAAGAAAGATCATTGCATTTGTTGGAGGTCTTGACTTGTGCTTGGGACGTTATGATACTCCGGAGCATTCTATATTTAGGACCTTACGTACAGTGCACAAGGATGACAATCGTAAGCCGACTTTCTCGAAACCCGTTATTGGGTGTCCAAGGCAGCCATGGCATGATTTGCACAGTAAAATTGATGGTCCAGCTGCTTATGACATCCTCACCAATTTTGAGCAGCGTTGGGGGACGGCTTCAAAACCACATGGTCTTCACAAACTAAAAGAACGAGGACTTCAAAAACTGAAATTACGAGGAGATAATGATGATGCATTACTCAAGATTGAGAAAATTCCTGAAATTCTTGGGATGACAGAGGTTCCTCGCTTGAGTGAGGATGACAAAGAAGCTTGGGATATTCAGGTTTTCCGTTCAATTGATTCCGATTCAGTGAAAGGATTTCCCGAAGACCCTGGAGAAGCTACAAGGGTGATAAATAAGAACGCAATCACCGTCTCTGACAATCACACCATCTCTGCATCCGTCAAGTTACTTGGGCCGGAAAACCTCTCGGGTAGGATTCAGGCAGGCCTCTGCCACAACGCAGTCGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005488 GO:0005543 GO:0005546 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006629 GO:0006643 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008289 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009816 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0022414 GO:0022626 GO:0030054 GO:0032501 GO:0032502 GO:0032991 GO:0035091 GO:0042221 GO:0042578 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0045087 GO:0046686 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0061458 GO:0071704 GO:0071944 GO:0098542 GO:1901981 GO:1902936 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

540

Amino Acids

59.97

Weight (kDa)

8.0

Isoelectric Point (pI)

37.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11830 AT4G11830 AT4G11830 AT4G11830 AT4G11840 AT4G11840 AT4G11850
fragaria_vesca	FvH4_5g01274 FvH4_5g01290 FvH4_5g01290 FvH4_5g01290
malus_domestica	MD04G1069600.v1.1
prunus_persica	Prupe.5G088300_v2.0.a1 Prupe.5G088300_v2.0.a1
pyrus_communis	pycom04g06330
rosa_chinensis	RchiOBHm_Chr4g0413221 RchiOBHm_Chr7g0199651 RchiOBHm_Chr7g0199691 RchiOBHm_Chr7g0199711 RchiOBHm_Chr7g0199731
rosa_laevigata	RLG00000003775 RLG00000003776 RLG00000003777 RLG00000003778 RLG00000003779
rosa_multiflora	Rmu_co8400099.1_g000001 Rmu_sc0002748.1_g000025 Rmu_sc0002748.1_g000027 Rmu_sc0002748.1_g000028 Rmu_sc0009191.1_g000004
rosa_roxburghii	Rroxscaffold_3G00256480 Rroxscaffold_3G00256490 Rroxscaffold_3G00256520
rosa_rugosa	Rorug07G0055600 Rorug07G0055800 Rorug07G0055900
rosa_samantha	Rh7AG180700 Rh7AG181000 Rh7AG181200 Rh7BG183600 Rh7BG183900 Rh7BG184100 Rh7CG190400 Rh7CG190600 Rh7CG190700 Rh7DG183600 Rh7DG183800
rosa_wichuraiana	Rw7G015870 Rw7G015880 Rw7G015890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	492
AccI	GTMKAC	2 cut(s)	464, 1617
AccII	CGCG	2 cut(s)	470, 498
AccIII	TCCGGA	1 cut(s)	1084
AciI	CCGC	5 cut(s)	169, 214, 468, 498, 670
AclWI	GGATC	2 cut(s)	506, 812
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	1359, 1368
AcuI	CTGAAG	2 cut(s)	116, 788
AfaI	GTAC	4 cut(s)	368, 538, 620, 1114
AfiI	CCNNNNNNNGG	4 cut(s)	55, 943, 1163, 1164
AflII	CTTAAG	1 cut(s)	614
AgsI	TTSAA	3 cut(s)	1266, 1307, 1443
AjnI	CCWGG	4 cut(s)	18, 202, 532, 1480
AluBI	AGCT	9 cut(s)	175, 356, 426, 450, 942, 962, 1217, 1418, 1490
AluI	AGCT	9 cut(s)	175, 356, 426, 450, 942, 962, 1217, 1418, 1490
Alw21I	GWGCWC	1 cut(s)	1122
Alw26I	GTCTC	2 cut(s)	155, 1528
Alw44I	GTGCAC	1 cut(s)	1118
AlwI	GGATC	2 cut(s)	506, 812
Ama87I	CYCGRG	1 cut(s)	1579
Aor13HI	TCCGGA	1 cut(s)	1084
AoxI	GGCC	6 cut(s)	3, 40, 138, 666, 1565, 1597
ApaLI	GTGCAC	1 cut(s)	1118
ApeKI	GCWGC	3 cut(s)	1177, 1217, 1246
ApoI	RAATTY	2 cut(s)	1359, 1368
Asp700I	GAANNNNTTC	1 cut(s)	72
AspS9I	GGNCC	8 cut(s)	41, 114, 276, 529, 667, 1104, 1211, 1565
AsuHPI	GGTGA	4 cut(s)	403, 1225, 1510, 1510
AsuII	TTCGAA	1 cut(s)	194
AvaI	CYCGRG	1 cut(s)	1579
AvaII	GGWCC	5 cut(s)	114, 276, 529, 1104, 1211
AxyI	CCTNAGG	1 cut(s)	54
BaeGI	GKGCMC	1 cut(s)	1122
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	855
BbsI	GAAGAC	4 cut(s)	776, 879, 1271, 1482
Bbv12I	GWGCWC	1 cut(s)	1122
BbvI	GCAGC	3 cut(s)	1189, 1204, 1258
BccI	CCATC	6 cut(s)	57, 599, 949, 987, 1202, 1547
BceAI	ACGGC	2 cut(s)	657, 1275
BciT130I	CCWGG	4 cut(s)	20, 204, 534, 1482
BclI	TGATCA	1 cut(s)	517
BcoDI	GTCTC	2 cut(s)	155, 1528
BfaI	CTAG	1 cut(s)	119
BfrI	CTTAAG	1 cut(s)	614
BisI	GCNGC	4 cut(s)	214, 1178, 1218, 1247
BlsI	GCNGC	4 cut(s)	215, 1179, 1219, 1248
Bme1390I	CCNGG	4 cut(s)	20, 204, 534, 1482
Bme18I	GGWCC	5 cut(s)	114, 276, 529, 1104, 1211
BmeT110I	CYCGRG	1 cut(s)	1579
BmgT120I	GGNCC	8 cut(s)	41, 114, 276, 529, 667, 1104, 1211, 1565
BmiI	GGNNCC	7 cut(s)	91, 115, 116, 391, 530, 531, 1389
BmrFI	CCNGG	4 cut(s)	20, 204, 534, 1482
BmrI	ACTGGG	1 cut(s)	699
BmsI	GCATC	6 cut(s)	384, 574, 643, 1000, 1327, 1556
BmuI	ACTGGG	1 cut(s)	699
BpiI	GAAGAC	4 cut(s)	776, 879, 1271, 1482
BpmI	CTGGAG	2 cut(s)	885, 1503
Bpu14I	TTCGAA	1 cut(s)	194
BpuEI	CTTGAG	2 cut(s)	1331, 1417
BsaAI	YACGTR	1 cut(s)	1112
BsaBI	GATNNNNATC	3 cut(s)	516, 609, 1131
BsaJI	CCNNGG	5 cut(s)	203, 532, 1172, 1181, 1480
BsaWI	WCCGGW	1 cut(s)	1084
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 943, 1163, 1164
Bse1I	ACTGG	3 cut(s)	414, 694, 902
Bse21I	CCTNAGG	1 cut(s)	54
Bse3DI	GCAATG	1 cut(s)	1035
Bse8I	GATNNNNATC	3 cut(s)	516, 609, 1131
BseAI	TCCGGA	1 cut(s)	1084
BseBI	CCWGG	4 cut(s)	20, 204, 534, 1482
BseDI	CCNNGG	5 cut(s)	203, 532, 1172, 1181, 1480
BseGI	GGATG	6 cut(s)	49, 1132, 1227, 1383, 1411, 1547
BseJI	GATNNNNATC	3 cut(s)	516, 609, 1131
BseLI	CCNNNNNNNGG	4 cut(s)	55, 943, 1163, 1164
BseMI	GCAATG	1 cut(s)	1035
BseMII	CTCAG	2 cut(s)	68, 366
BseNI	ACTGG	3 cut(s)	414, 694, 902
BseRI	GAGGAG	1 cut(s)	1338
BseSI	GKGCMC	1 cut(s)	1122
BseXI	GCAGC	3 cut(s)	1189, 1204, 1258
BseYI	CCCAGC	1 cut(s)	942
BsgI	GTGCAG	1 cut(s)	686
Bsh1236I	CGCG	2 cut(s)	470, 498
Bsh1285I	CGRYCG	1 cut(s)	929
BshFI	GGCC	6 cut(s)	5, 42, 140, 668, 1567, 1599
BsiEI	CGRYCG	1 cut(s)	929
BsiHKAI	GWGCWC	1 cut(s)	1122
BsiHKCI	CYCGRG	1 cut(s)	1579
BsiSI	CCGG	2 cut(s)	1085, 1568
BslFI	GGGAC	6 cut(s)	100, 220, 515, 827, 1083, 1270
BslI	CCNNNNNNNGG	4 cut(s)	55, 943, 1163, 1164
BsmAI	GTCTC	2 cut(s)	155, 1528
BsmBI	CGTCTC	1 cut(s)	1528
BsmFI	GGGAC	6 cut(s)	100, 220, 515, 827, 1083, 1270
BsmI	GAATGC	1 cut(s)	1090
BsnI	GGCC	6 cut(s)	5, 42, 140, 668, 1567, 1599
BsoBI	CYCGRG	1 cut(s)	1579
Bsp119I	TTCGAA	1 cut(s)	194
Bsp1286I	GDGCHC	2 cut(s)	855, 1122
Bsp13I	TCCGGA	1 cut(s)	1084
Bsp143I	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
Bsp19I	CCATGG	1 cut(s)	1181
BspACI	CCGC	5 cut(s)	169, 214, 468, 498, 670
BspANI	GGCC	6 cut(s)	5, 42, 140, 668, 1567, 1599
BspCNI	CTCAG	2 cut(s)	67, 365
BspEI	TCCGGA	1 cut(s)	1084
BspFNI	CGCG	2 cut(s)	470, 498
BspLI	GGNNCC	7 cut(s)	91, 115, 116, 391, 530, 531, 1389
BspPI	GGATC	2 cut(s)	506, 812
BspT104I	TTCGAA	1 cut(s)	194
BspTI	CTTAAG	1 cut(s)	614
BsrDI	GCAATG	1 cut(s)	1035
BsrI	ACTGG	3 cut(s)	414, 694, 902
BssECI	CCNNGG	5 cut(s)	203, 532, 1172, 1181, 1480
BssMI	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
BssNAI	GTATAC	1 cut(s)	465
BssT1I	CCWWGG	2 cut(s)	1172, 1181
Bst1107I	GTATAC	1 cut(s)	465
Bst2UI	CCWGG	4 cut(s)	20, 204, 534, 1482
Bst4CI	ACNGT	5 cut(s)	363, 994, 1117, 1199, 1522
Bst6I	CTCTTC	1 cut(s)	281
BstAFI	CTTAAG	1 cut(s)	614
BstAPI	GCANNNNNTGC	1 cut(s)	1192
BstBAI	YACGTR	1 cut(s)	1112
BstBI	TTCGAA	1 cut(s)	194
BstC8I	GCNNGC	4 cut(s)	173, 186, 670, 1597
BstDEI	CTNAG	3 cut(s)	54, 327, 352
BstDSI	CCRYGG	1 cut(s)	1181
BstF5I	GGATG	6 cut(s)	49, 1132, 1227, 1383, 1411, 1547
BstFNI	CGCG	2 cut(s)	470, 498
BstKTI	GATC	8 cut(s)	514, 520, 601, 613, 763, 820, 929, 1035
BstMAI	GTCTC	2 cut(s)	155, 1528
BstMBI	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
BstMCI	CGRYCG	1 cut(s)	929
BstMWI	GCNNNNNNNGC	3 cut(s)	181, 1183, 1192
BstNI	CCWGG	4 cut(s)	20, 204, 534, 1482
BstSCI	CCNGG	4 cut(s)	18, 202, 532, 1480
BstSLI	GKGCMC	1 cut(s)	1122
BstSNI	TACGTA	1 cut(s)	1112
BstUI	CGCG	2 cut(s)	470, 498
BstV1I	GCAGC	3 cut(s)	1189, 1204, 1258
BstV2I	GAAGAC	4 cut(s)	776, 879, 1271, 1482
BstX2I	RGATCY	1 cut(s)	511
BstYI	RGATCY	1 cut(s)	511
BstZ17I	GTATAC	1 cut(s)	465
Bsu36I	CCTNAGG	1 cut(s)	54
BsuRI	GGCC	6 cut(s)	5, 42, 140, 668, 1567, 1599
BtgI	CCRYGG	1 cut(s)	1181
BtsCI	GGATG	6 cut(s)	49, 1132, 1227, 1383, 1411, 1547
BtsI	GCAGTG	1 cut(s)	698
BtsIMutI	CAGTG	4 cut(s)	421, 698, 1122, 1464
Cac8I	GCNNGC	4 cut(s)	173, 186, 670, 1597
Cfr13I	GGNCC	8 cut(s)	41, 114, 276, 529, 667, 1104, 1211, 1565
CseI	GACGC	2 cut(s)	884, 1013
Csp6I	GTAC	4 cut(s)	367, 537, 619, 1113
CviAII	CATG	9 cut(s)	78, 110, 157, 590, 626, 856, 1182, 1187, 1274
CviQI	GTAC	4 cut(s)	367, 537, 619, 1113
DdeI	CTNAG	3 cut(s)	54, 327, 352
DpnI	GATC	8 cut(s)	513, 519, 600, 612, 762, 819, 928, 1034
DpnII	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
DraI	TTTAAA	2 cut(s)	841, 1024
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	281
EarI	CTCTTC	1 cut(s)	281
Eco105I	TACGTA	1 cut(s)	1112
Eco130I	CCWWGG	2 cut(s)	1172, 1181
Eco147I	AGGCCT	1 cut(s)	1599
Eco24I	GRGCYC	1 cut(s)	855
Eco47I	GGWCC	5 cut(s)	114, 276, 529, 1104, 1211
Eco57I	CTGAAG	2 cut(s)	116, 788
Eco81I	CCTNAGG	1 cut(s)	54
Eco88I	CYCGRG	1 cut(s)	1579
EcoO109I	RGGNCCY	4 cut(s)	114, 276, 529, 1104
EcoRII	CCWGG	4 cut(s)	18, 202, 532, 1480
EcoT14I	CCWWGG	2 cut(s)	1172, 1181
EcoT22I	ATGCAT	2 cut(s)	861, 1342
EcoT38I	GRGCYC	1 cut(s)	855
ErhI	CCWWGG	2 cut(s)	1172, 1181
Esp3I	CGTCTC	1 cut(s)	1528
FaeI	CATG	9 cut(s)	81, 113, 160, 593, 629, 859, 1185, 1190, 1277
FalI	AAGNNNNNCTT	4 cut(s)	558, 590, 786, 818
FaqI	GGGAC	6 cut(s)	100, 220, 515, 827, 1083, 1270
FatI	CATG	9 cut(s)	77, 109, 156, 589, 625, 855, 1181, 1186, 1273
FauI	CCCGC	1 cut(s)	677
FauNDI	CATATG	1 cut(s)	238
FbaI	TGATCA	1 cut(s)	517
FblI	GTMKAC	2 cut(s)	464, 1617
Fnu4HI	GCNGC	4 cut(s)	214, 1178, 1218, 1247
FokI	GGATG	6 cut(s)	36, 1139, 1214, 1390, 1418, 1534
FriOI	GRGCYC	1 cut(s)	855
Fsp4HI	GCNGC	4 cut(s)	214, 1178, 1218, 1247
FspBI	CTAG	1 cut(s)	119
GluI	GCNGC	4 cut(s)	214, 1178, 1218, 1247
GsaI	CCCAGC	1 cut(s)	946
GsuI	CTGGAG	2 cut(s)	885, 1503
HaeIII	GGCC	6 cut(s)	5, 42, 140, 668, 1567, 1599
HapII	CCGG	2 cut(s)	1085, 1568
HgaI	GACGC	2 cut(s)	884, 1013
Hin1II	CATG	9 cut(s)	81, 113, 160, 593, 629, 859, 1185, 1190, 1277
HincII	GTYRAC	1 cut(s)	1618
HindII	GTYRAC	1 cut(s)	1618
HindIII	AAGCTT	2 cut(s)	173, 1416
HinfI	GANTC	6 cut(s)	23, 348, 896, 1448, 1454, 1588
HpaII	CCGG	2 cut(s)	1085, 1568
HphI	GGTGA	4 cut(s)	403, 1225, 1510, 1510
Hpy166II	GTNNAC	4 cut(s)	465, 1003, 1120, 1618
Hpy188I	TCNGA	6 cut(s)	716, 726, 745, 987, 1453, 1528
Hpy8I	GTNNAC	4 cut(s)	465, 1003, 1120, 1618
Hpy99I	CGWCG	1 cut(s)	885
HpyAV	CCTTC	5 cut(s)	91, 158, 403, 779, 842
HpyCH4III	ACNGT	5 cut(s)	363, 994, 1117, 1199, 1522
HpyCH4IV	ACGT	3 cut(s)	883, 1072, 1111
HpyCH4V	TGCA	9 cut(s)	188, 656, 703, 859, 1040, 1120, 1195, 1340, 1547
HpyF10VI	GCNNNNNNNGC	3 cut(s)	181, 1183, 1192
HpyF3I	CTNAG	3 cut(s)	54, 327, 352
HpySE526I	ACGT	3 cut(s)	883, 1072, 1111
Hsp92II	CATG	9 cut(s)	81, 113, 160, 593, 629, 859, 1185, 1190, 1277
KflI	GGGWCCC	2 cut(s)	114, 529
Kpn2I	TCCGGA	1 cut(s)	1084
Ksp22I	TGATCA	1 cut(s)	517
Kzo9I	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
LmnI	GCTCC	1 cut(s)	1087
Lsp1109I	GCAGC	3 cut(s)	1189, 1204, 1258
LweI	GCATC	6 cut(s)	384, 574, 643, 1000, 1327, 1556
MaeI	CTAG	1 cut(s)	119
MaeII	ACGT	3 cut(s)	883, 1072, 1111
MaeIII	GTNAC	5 cut(s)	241, 568, 696, 777, 1557
MalI	GATC	8 cut(s)	513, 519, 600, 612, 762, 819, 928, 1034
MboI	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
MboII	GAAGA	6 cut(s)	77, 298, 781, 884, 1271, 1487
MfeI	CAATTG	1 cut(s)	1443
MflI	RGATCY	1 cut(s)	511
MhlI	GDGCHC	2 cut(s)	855, 1122
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	890
MmeI	TCCRAC	3 cut(s)	325, 845, 1027
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	2 cut(s)	861, 1342
MroI	TCCGGA	1 cut(s)	1084
MroXI	GAANNNNTTC	1 cut(s)	72
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	5 cut(s)	615, 831, 840, 891, 1023
MslI	CAYNNNNRTG	2 cut(s)	864, 1125
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1217
MspCI	CTTAAG	1 cut(s)	614
MspI	CCGG	2 cut(s)	1085, 1568
MspR9I	CCNGG	4 cut(s)	20, 204, 534, 1482
MunI	CAATTG	1 cut(s)	1443
Mva1269I	GAATGC	1 cut(s)	1090
MvaI	CCWGG	4 cut(s)	20, 204, 534, 1482
MvnI	CGCG	2 cut(s)	470, 498
MwoI	GCNNNNNNNGC	3 cut(s)	181, 1183, 1192
NcoI	CCATGG	1 cut(s)	1181
NdeI	CATATG	1 cut(s)	238
NdeII	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
NlaIII	CATG	9 cut(s)	81, 113, 160, 593, 629, 859, 1185, 1190, 1277
NlaIV	GGNNCC	7 cut(s)	91, 115, 116, 391, 530, 531, 1389
NmuCI	GTSAC	2 cut(s)	696, 777
NsiI	ATGCAT	2 cut(s)	861, 1342
NspV	TTCGAA	1 cut(s)	194
PceI	AGGCCT	1 cut(s)	1599
PcsI	WCGNNNNNNNCGW	1 cut(s)	1518
PctI	GAATGC	1 cut(s)	1090
PdmI	GAANNNNTTC	1 cut(s)	72
PfeI	GAWTC	5 cut(s)	23, 348, 1448, 1454, 1588
PflFI	GACNNNGTC	1 cut(s)	775
PkrI	GCNGC	4 cut(s)	215, 1179, 1219, 1248
Ple19I	CGATCG	1 cut(s)	929
PleI	GAGTC	1 cut(s)	890
PpsI	GAGTC	1 cut(s)	890
Ppu21I	YACGTR	1 cut(s)	1112
PpuMI	RGGWCCY	4 cut(s)	114, 276, 529, 1104
PsiI	TTATAA	1 cut(s)	492
Psp5II	RGGWCCY	4 cut(s)	114, 276, 529, 1104
Psp6I	CCWGG	4 cut(s)	18, 202, 532, 1480
PspFI	CCCAGC	1 cut(s)	942
PspGI	CCWGG	4 cut(s)	18, 202, 532, 1480
PspN4I	GGNNCC	7 cut(s)	91, 115, 116, 391, 530, 531, 1389
PspPI	GGNCC	8 cut(s)	41, 114, 276, 529, 667, 1104, 1211, 1565
PspPPI	RGGWCCY	4 cut(s)	114, 276, 529, 1104
PsuI	RGATCY	1 cut(s)	511
PsyI	GACNNNGTC	1 cut(s)	775
PvuI	CGATCG	1 cut(s)	929
PvuII	CAGCTG	1 cut(s)	1217
RsaI	GTAC	4 cut(s)	368, 538, 620, 1114
RsaNI	GTAC	4 cut(s)	367, 537, 619, 1113
RseI	CAYNNNNRTG	2 cut(s)	864, 1125
SalI	GTCGAC	1 cut(s)	1616
SaqAI	TTAA	5 cut(s)	615, 831, 840, 891, 1023
SatI	GCNGC	4 cut(s)	214, 1178, 1218, 1247
Sau3AI	GATC	8 cut(s)	511, 517, 598, 610, 760, 817, 926, 1032
Sau96I	GGNCC	8 cut(s)	41, 114, 276, 529, 667, 1104, 1211, 1565
SchI	GAGTC	1 cut(s)	890
ScrFI	CCNGG	4 cut(s)	20, 204, 534, 1482
SduI	GDGCHC	2 cut(s)	855, 1122
SfaNI	GCATC	6 cut(s)	384, 574, 643, 1000, 1327, 1556
SfuI	TTCGAA	1 cut(s)	194
SinI	GGWCC	5 cut(s)	114, 276, 529, 1104, 1211
SmiMI	CAYNNNNRTG	2 cut(s)	864, 1125
SmlI	CTYRAG	3 cut(s)	614, 1346, 1396
SmoI	CTYRAG	3 cut(s)	614, 1346, 1396
SnaBI	TACGTA	1 cut(s)	1112
SseBI	AGGCCT	1 cut(s)	1599
SsiI	CCGC	5 cut(s)	169, 214, 468, 498, 670
SspMI	CTAG	1 cut(s)	119
StuI	AGGCCT	1 cut(s)	1599
StyD4I	CCNGG	4 cut(s)	18, 202, 532, 1480
StyI	CCWWGG	2 cut(s)	1172, 1181
TaaI	ACNGT	5 cut(s)	363, 994, 1117, 1199, 1522
TaiI	ACGT	3 cut(s)	886, 1075, 1114
TaqI	TCGA	6 cut(s)	194, 297, 880, 925, 1151, 1617
TatI	WGTACW	1 cut(s)	366
TauI	GCSGC	1 cut(s)	216
TfiI	GAWTC	5 cut(s)	23, 348, 1448, 1454, 1588
Tru1I	TTAA	5 cut(s)	615, 831, 840, 891, 1023
Tru9I	TTAA	5 cut(s)	615, 831, 840, 891, 1023
TscAI	CASTG	4 cut(s)	421, 705, 1122, 1464
TseFI	GTSAC	2 cut(s)	696, 777
TseI	GCWGC	3 cut(s)	1177, 1217, 1246
Tsp45I	GTSAC	2 cut(s)	696, 777
TspDTI	ATGAA	2 cut(s)	729, 885
TspGWI	ACGGA	2 cut(s)	1427, 1540
TspRI	CASTG	4 cut(s)	421, 705, 1122, 1464
Tth111I	GACNNNGTC	1 cut(s)	775
Vha464I	CTTAAG	1 cut(s)	614
VneI	GTGCAC	1 cut(s)	1118
VpaK11BI	GGWCC	5 cut(s)	114, 276, 529, 1104, 1211
XapI	RAATTY	2 cut(s)	1359, 1368
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1179
XmiI	GTMKAC	2 cut(s)	464, 1617
XmnI	GAANNNNTTC	1 cut(s)	72
XspI	CTAG	1 cut(s)	119
Zsp2I	ATGCAT	2 cut(s)	861, 1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.